BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002614
         (900 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 1167 bits (3018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/878 (68%), Positives = 697/878 (79%), Gaps = 21/878 (2%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           MLIWYSGKEE+QLKLN VSRIIPGQRT  FQRYPRPEKEYQSFSLIY DRSLDLICKDKD
Sbjct: 49  MLIWYSGKEEKQLKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKD 108

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVP 120
           EAEVW +GLK LI+RG + KW+    + S SS+SP +R R+ SP+++  D GD Q TQV 
Sbjct: 109 EAEVWFIGLKGLISRGNYRKWRSEIRDDSISSESPHSRARRISPSLSSSDPGDTQQTQVT 168

Query: 121 LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRIS 180
            +N+  +GLGKAF+D+ISYT +  + ++A+SV+ S S L++   DNSN R+SA+E FR+S
Sbjct: 169 FENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVS 228

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           LSS VSSSS GS H+DFD+LGDVF+WGEGI +G +G G HRVG S S + DALLPKA+ES
Sbjct: 229 LSSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALES 288

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
           T+ LDVH+IACG +HAVLVTK+GE+FSWGEE G RLGHG E DVSHP+LI+ L G+N+EL
Sbjct: 289 TVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIEL 348

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VACGEYH+CAVT SGDLYTWGDGT+NSGLLGHGS+ S WIP+KVSG ++G+H+SY++CG 
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGP 408

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV- 419
           WHTAVVTSAG LFTFGDG+FGALGHGDH S SIPREVE LRG RT RV+CGVWHTAAVV 
Sbjct: 409 WHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVE 468

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           +   SSS   SGS+S GKLFTWGDGDKGRLGHGDKEPRL P+ V  LI+E+ CQVACGH+
Sbjct: 469 LMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHN 528

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           LSVALTTSG VYTMGSA YGQLG PVADG +PT V+G+IA SFVEEVACG+YHVA LTS 
Sbjct: 529 LSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSK 588

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           ++VYTWGKG NGQLGHGD D+RN+PTLVDFLKDKQVK VVCGLNFTA I LHKWVS  DH
Sbjct: 589 TEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADH 648

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           S+CS CHN FGFRRKRHNCYNCGLVFC  CSSRKSLKA+LAP++NKPYRVCDDCFTKLKK
Sbjct: 649 SICSGCHNQFGFRRKRHNCYNCGLVFCNTCSSRKSLKASLAPNMNKPYRVCDDCFTKLKK 708

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTES 719
                   SG  SV++ P+ R+ N+  K+ E+A+R+  GPR+Q QLS LSS DS  + ES
Sbjct: 709 A-----MESG--SVLRIPKARSSNILQKSNEIAERDTMGPRVQGQLSRLSSVDSFSRAES 761

Query: 720 RLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
           +  K + KLE  D  V P +N N+Q G  +S K S  L   S+K FSAS   SR+ S AT
Sbjct: 762 KHYKCDTKLEFNDARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRAT 821

Query: 779 SPVSGKSSS------------ARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHL 826
           SPVSGKSS              RS   T DD K  NDSL++EII LRAQVE LT KS+ L
Sbjct: 822 SPVSGKSSPPQSAMLAASLAVVRSPEATDDDPKHTNDSLSREIINLRAQVENLTGKSQIL 881

Query: 827 EAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           EAELER+S++LK VTA+AE EAEKCK A EVIKSLT Q
Sbjct: 882 EAELERSSRKLKEVTAVAEGEAEKCKAAKEVIKSLTAQ 919


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score = 1112 bits (2875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/872 (66%), Positives = 680/872 (77%), Gaps = 18/872 (2%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           MLIWYSGKEE+QLKL+QVS+IIPGQRTA FQRYPRPEKEYQSFSLIY+DRSLDLICKDKD
Sbjct: 49  MLIWYSGKEEKQLKLSQVSKIIPGQRTAIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKD 108

Query: 61  EAEVWLVGLKALITRGTH-SKWKLGTINCSTSSDSPRARIRKTSPTVTPFD-----FGDI 114
           EAEVW VGLKALITRG++ SKW++   + STSSDSP  R R+ S +++PF       GD 
Sbjct: 109 EAEVWFVGLKALITRGSYQSKWRIEPRSESTSSDSPHIRTRRHSRSISPFVRSSLWHGDG 168

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAA 174
           QG+ VP +++ +N LGKAF DIISYT A  + SRA+ +S   S L  A  DNSN R+S A
Sbjct: 169 QGSPVPFESIPSNRLGKAFCDIISYTAAEKSPSRAELLSSPFSSLNAACVDNSNGRTSTA 228

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +T R+SLSS VSSSS GS HEDFD+LGDVF WGEG+ +G LGGG H  G + S + DA L
Sbjct: 229 DTVRVSLSSAVSSSSQGSYHEDFDALGDVFFWGEGVGDGILGGGVHITGITSSPKVDAFL 288

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PKA+ES + LDVH IACG RHAVLVTK GEIFSWGEESGGRLGHG +ADV +P+LI+ L+
Sbjct: 289 PKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLA 348

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G+N+ELVACGE HTCAVT SGDLYTWGDG YN GLLGHGS+ S WIP+++ G+++GIH+S
Sbjct: 349 GMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVS 408

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           Y+SCG WHTA VTS G LFTFGDG+FGALGHGDH S ++PREVETLRGLRT RVSCGVWH
Sbjct: 409 YVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWH 468

Query: 415 TAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           TAA V + T+SSS   SGS++ GKLFTWG+GD+ RLGHGDKEPRLFPECV  L DENICQ
Sbjct: 469 TAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQ 528

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           VACGH+L++ALT +G VYTMGS +YGQLG P A G VP  V+G+IA   +EE+ACG+YHV
Sbjct: 529 VACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHV 588

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
           A LTS ++VYTWGKG NGQLGHGD  +RN PT+VDFL+DKQV+ V CG NFTAIICLHKW
Sbjct: 589 AVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKW 648

Query: 594 VSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDC 653
           VSS DHSVCS CHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKA+LAP++NKP+RVCDDC
Sbjct: 649 VSSADHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKASLAPNMNKPHRVCDDC 708

Query: 654 FTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDS 713
           F KLKK            +V + P++R GN+N KT E ADRE   P+LQ QLS L S DS
Sbjct: 709 FNKLKKAAEP-------GTVPRIPKSRAGNLNQKTNEAADRETLDPKLQTQLSRLPSLDS 761

Query: 714 NKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
             Q ES  S+++   E     V+PV   N Q+G  YS K S FL  +S   F   AS SR
Sbjct: 762 ASQAESWHSRRDRISESDTTRVFPVLIGNWQLGHFYSSKGSSFLGGTSTNFFLNPASGSR 821

Query: 773 MSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELER 832
           M   AT P+ G+++  RSS    DDSK MNDSL+ EII LRAQVE+LT KS  LEAELER
Sbjct: 822 MPPPATPPLPGRTTPPRSS---FDDSKHMNDSLSDEIISLRAQVEDLTLKSCRLEAELER 878

Query: 833 TSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            S+QLK V AIA DEAEK K+A EVIKSLT Q
Sbjct: 879 KSRQLKEVAAIAADEAEKRKSAKEVIKSLTAQ 910


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score = 1088 bits (2815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/867 (65%), Positives = 663/867 (76%), Gaps = 63/867 (7%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +L+WYSGK+E+QLKL+ VS+IIPGQRTA FQ+YP+PEKEYQSFSL+YNDRSLDLICKDKD
Sbjct: 49  LLVWYSGKDEKQLKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLYNDRSLDLICKDKD 108

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVP 120
           EAEVW VGLKALITRG H KW++ +   S SSDSP AR+R+ SP++TP D GD+ G  V 
Sbjct: 109 EAEVWFVGLKALITRGNHRKWRVESRCESVSSDSPHARLRRNSPSITPCDPGDLDG--VS 166

Query: 121 LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRIS 180
            +N   N LGKAF++++SYT  +   S+  S+  +PS L+ A  DNSN R SA+E FR+S
Sbjct: 167 YENTGQNRLGKAFSELLSYTAVSKGTSQPKSI-VNPS-LSTALIDNSNGRISASEGFRVS 224

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY--SFSRQTDALLPKAV 238
           LSS VSSSS GS  EDFD+LGDV+IWGEGI +G LGGG ++VG   S + + DALLPKA+
Sbjct: 225 LSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKAL 284

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           EST+ LDVH IACG RHAVLVT+QGEIFSWGEESGGRLGHG EADVSHP++I+ LSG NV
Sbjct: 285 ESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNV 344

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           ELVACGEYHTCAVT SGDLYTWGDGT+N GLLGHGS+VS WIP+KV G ++GI +SYISC
Sbjct: 345 ELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISC 404

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WHTAVVTSAG LFTFGDGSFGALGHGDHI+++ PREVETLRGLRTT+V+CGVWHTAA 
Sbjct: 405 GAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAA 464

Query: 419 VVATDS-SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           V A +  S S  S S S  KL+TWGDGDKGRLGHGD EPRL PECVA LI+E ICQVACG
Sbjct: 465 VEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACG 524

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           +DL+VALTT+G VYTMGS AYGQLG   A+G +PT V+GEIA SFVEEVACG+YHVA LT
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLT 584

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S ++VYTWGKG NGQLGHGD ++RN+PT+VD LKDKQVK V CG  FT +IC+HKWVSS 
Sbjct: 585 SKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSA 644

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           DHSVCS CHNPFGFRRKRHNCYNCGLVFCKACSS+KSLKA+LAP+  KPYRVCDDCF KL
Sbjct: 645 DHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNXKKPYRVCDDCFNKL 704

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQT 717
           KK           +SV Q+ R RTGN+++K+  + D+E   P+LQ  LS LSSF +    
Sbjct: 705 KKIMES-------SSVSQNARARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNA 757

Query: 718 ESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLA 777
           ES                                                   SR++S A
Sbjct: 758 ESM-------------------------------------------------HSRLASRA 768

Query: 778 TSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQL 837
           TSPV G SS  RSS    +DSK+ ND+L QEII LRAQV+ELT KS++LEAELE+TSK+L
Sbjct: 769 TSPVLGTSSPIRSSEDFSEDSKRANDTLTQEIISLRAQVQELTCKSKNLEAELEKTSKKL 828

Query: 838 KTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             VTAIA DEAEKCK+A EVIKSL  Q
Sbjct: 829 LEVTAIAADEAEKCKSAKEVIKSLAAQ 855


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score = 1023 bits (2645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/818 (65%), Positives = 624/818 (76%), Gaps = 63/818 (7%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +L+WYSGK+E+QLKL+ VS+IIPGQRTA FQ+YP+PEKEYQSFSL+YNDRSLDLICKDKD
Sbjct: 49  LLVWYSGKDEKQLKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLYNDRSLDLICKDKD 108

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVP 120
           EAEVW VGLKALITRG H KW++ +   S SSDSP AR+R+ SP++TP D GD+ G  V 
Sbjct: 109 EAEVWFVGLKALITRGNHRKWRVESRCESVSSDSPHARLRRNSPSITPCDPGDLDG--VS 166

Query: 121 LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRIS 180
            +N   N LGKAF++++SYT  +   S+  S+  +PS L+ A  DNSN R SA+E FR+S
Sbjct: 167 YENTGQNRLGKAFSELLSYTAVSKGTSQPKSI-VNPS-LSTALIDNSNGRISASEGFRVS 224

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY--SFSRQTDALLPKAV 238
           LSS VSSSS GS  EDFD+LGDV+IWGEGI +G LGGG ++VG   S + + DALLPKA+
Sbjct: 225 LSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKAL 284

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           EST+ LDVH IACG RHAVLVT+QGEIFSWGEESGGRLGHG EADVSHP++I+ LSG NV
Sbjct: 285 ESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNV 344

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           ELVACGEYHTCAVT SGDLYTWGDGT+N GLLGHGS+VS WIP+KVSG ++GI +SYISC
Sbjct: 345 ELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISC 404

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WHTAVVTSAG LFTFGDGSFGALGHGDHI+++ PREVETLRGLRTT+V+CGVWHTAA 
Sbjct: 405 GAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAA 464

Query: 419 VVATDS-SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           V A +  S S  S S S  KL+TWGDGDKGRLGHGD EPRL PECVA L++E ICQVACG
Sbjct: 465 VEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACG 524

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           +DL+VALTT+G VYTMGS AYGQLG   A+G +PT V+GEIA SFVEEVACG+YHVA LT
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLT 584

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S ++VYTWGKG NGQLGHGD ++RN+PT+VD LKDKQVK V CG  FT +IC+HKWVSS 
Sbjct: 585 SKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSA 644

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           DHSVCS CHNPFGFRRKRHNCYNCGLVFCKACSS+KSLKA+LAP++NKPYRVCDDCF KL
Sbjct: 645 DHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNLNKPYRVCDDCFNKL 704

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQT 717
           KK           +SV Q+ R RTGN+++K+  + D+E   P+LQ  LS LSSF +    
Sbjct: 705 KKIMES-------SSVSQNARARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNA 757

Query: 718 ESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLA 777
           ES                                                   SR++S A
Sbjct: 758 ESM-------------------------------------------------HSRLASRA 768

Query: 778 TSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
           TSPV G SS  RSS    +DSK+ ND+L QEII LRAQ
Sbjct: 769 TSPVLGTSSPIRSSEDFSEDSKRANDTLTQEIISLRAQ 806


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/895 (60%), Positives = 645/895 (72%), Gaps = 46/895 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 56  VLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 115

Query: 61  EAEVWLVGLKALITRGTH-SKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF-------- 109
           EAEVW  GLKALI+RG H  KW+  + +    + ++SPR   R++SP  +PF        
Sbjct: 116 EAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQK 175

Query: 110 DFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND 169
           D GD      P ++   + + KAF+D+I Y         +DS S S   L++   D+ + 
Sbjct: 176 DGGDHLRLHSPYESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHG 235

Query: 170 RSSAA--ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
              A   + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G LGGG HRVG  F 
Sbjct: 236 HMKAMTMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFG 295

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
            + D+LLPKA+ES + LDV NIACG RHA LVTKQGEIFSWGEESGGRLGHG ++DV HP
Sbjct: 296 MKMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHP 355

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           +LI+ LS  N+ELVACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G 
Sbjct: 356 KLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 415

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L+GIH+S ISCG WHTAVVTS+G LFTFGDG+FG LGHGD  S S PREVE+L+G RT  
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVI 475

Query: 408 VSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            +CGVWHTAAVV +   + SSS   + S GKLFTWGDGDKGRLGHGDKE +L P CVA L
Sbjct: 476 SACGVWHTAAVVEIMVGNPSSS---NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 532

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
           +D N C+VACGH L+VALTTSGHVYTMGS  YGQLG P ADG +PTRV+G++A+SFVEE+
Sbjct: 533 VDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEI 592

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           ACGAYHVA LTS ++VYTWGKGANG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA
Sbjct: 593 ACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTA 652

Query: 587 IICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKP 646
            ICLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKP
Sbjct: 653 TICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKP 712

Query: 647 YRVCDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQ 702
           YRVCD+CF+KL+K   TD             QS  +R G  N    EL D+ E    R +
Sbjct: 713 YRVCDNCFSKLRKAIETDAS----------SQSAVSRRGVTNQGLNELIDKDEKLDSRSR 762

Query: 703 DQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSK 761
            QL+  SS +S KQ ESR SK+N KLE   + V P+ N   Q G      + +F   SSK
Sbjct: 763 VQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGGSQWGGALKSLNPVF--GSSK 820

Query: 762 KKFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEI 809
           K FSAS   SR+ S  TSP+S + S  R            S  + +DD+K+ NDSL+QE+
Sbjct: 821 KFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSLSQEV 880

Query: 810 IKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           IKLR QVE LT K++  E ELERT+KQLK   AIA +E  +CK A EVIKSLT Q
Sbjct: 881 IKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEETARCKAAKEVIKSLTAQ 935


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  996 bits (2575), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/892 (60%), Positives = 651/892 (72%), Gaps = 41/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYN+RSLDLICKDKD
Sbjct: 50  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNERSLDLICKDKD 109

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGD---IQ 115
           EAEVW  GLKALITR    KW+  + +    + ++SPR   R++SP  +PF   D     
Sbjct: 110 EAEVWFSGLKALITRSHQRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKD 169

Query: 116 GTQV----PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDN--SND 169
           G Q+    P ++   NGL KAF+D+I Y         +DS S S   L++   D+   + 
Sbjct: 170 GDQLRLHSPYESPPKNGLDKAFSDVILYAVPPKGFFPSDSASASVHSLSSGGSDSVRGHM 229

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           ++ A + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G LGGG HR G  F  +
Sbjct: 230 KAMAMDAFRVSLSSAVSSSSQGSGHDDSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGVK 289

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D+LLPKA+EST+ LDV NIACG RHA LVTKQGE+FSWGEESGGRLGHG ++DV HP+L
Sbjct: 290 LDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKL 349

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+ LS +N+ELVACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G L+
Sbjct: 350 IDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 409

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GIH+S ISCG WHTAVVTS+G LFTFGDG+FG LGHGD  S SIPREVE+L+GLRT R +
Sbjct: 410 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 469

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV     +SS  S + S GKLFTWGDGDKGRLGHGDKE +L P CVA L++ 
Sbjct: 470 CGVWHTAAVVEVMVGNSS--SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 527

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           N CQVACGH L+VALTTSGHVYTMGS  YGQLG P ADG +P RV+G +++SFVEE+ACG
Sbjct: 528 NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACG 587

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           AYHVA LTS ++VYTWGKGANG+LGHGD D+RN P+LV+ LKDKQVK + CG NFTA IC
Sbjct: 588 AYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAIC 647

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS +D S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKP+RV
Sbjct: 648 LHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPFRV 707

Query: 650 CDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQL 705
           CD+C++KL+K   TD             QS  +R G+VNH + E  D+ E    R + QL
Sbjct: 708 CDNCYSKLRKAIETDAS----------SQSSVSRRGSVNHGSNEFIDKDEKLDSRSRAQL 757

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  SS +S KQ E+R SK+N KLE   + V PV N   Q G +   KS   +  SSKK F
Sbjct: 758 ARFSSMESLKQAENR-SKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPMFGSSKKFF 816

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR+ S ATSP+S + S  R            S  + ++D+K+ N+SL+QE+ KL
Sbjct: 817 SASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKLVVNDAKRTNESLSQEVNKL 876

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RAQVE LT K++  E ELER +KQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 877 RAQVESLTRKAQVQEVELERAAKQLKEAIAIAGEETAKCKAAKEVIKSLTAQ 928


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  985 bits (2547), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/891 (59%), Positives = 643/891 (72%), Gaps = 39/891 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 78  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 137

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+R  H KW+  + +    + ++SPR   R++SP  +PF        D
Sbjct: 138 EAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLHSPFGSNESSQKD 197

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            GD      P ++   NGL KA  D++ Y     +    DS S S   +++   D+ +  
Sbjct: 198 SGDHLRLHSPYESPPKNGLDKAL-DVVLYAVPQKSFFPLDSASASVHSISSGGSDSMHGH 256

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G +GGG HRVG     
Sbjct: 257 MKTMGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVVGGGNHRVGSGLGV 316

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+L PKA+ES + LDV NIACG RHA LVTKQGEIFSWGEESGGRLGHG ++DV HP+
Sbjct: 317 KIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPK 376

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ LS  N+ELVACGEYHTCAVT SGDLYTWG+G YN GLLGHG++VS W+P++V+G L
Sbjct: 377 LIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPL 436

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+SYISCG WHTAVVTSAG LFTFGDG+FGALGHGD  S S+PREVE+L+GLRT R 
Sbjct: 437 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRA 496

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           SCGVWHTAAVV       +S S + S GKLFTWGDGDKGRLGHGDKE +L P CVA L++
Sbjct: 497 SCGVWHTAAVVEVM--VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-LVE 553

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVY MGS  YGQLG P ADG +PTRV+G++ +SFVEE+AC
Sbjct: 554 HNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIAC 613

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LT  ++VYTWGKGANG+LGHGD D+RN+PTLVD LKDK VK + CG NFTA I
Sbjct: 614 GAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKPYR
Sbjct: 674 CLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 733

Query: 649 VCDDCFTKLKKT-DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ-GPRLQDQLS 706
           VCD CF KL+KT +T     S  +            +N  + EL D++ +   R ++QL+
Sbjct: 734 VCDGCFNKLRKTLETDSSSHSSVSRRGS--------INQGSLELIDKDDKLDTRSRNQLA 785

Query: 707 ILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFS 765
             SS +S KQ ESR SK+N KLE   + V PV N   Q G +   KS   +  SSKK FS
Sbjct: 786 RFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQRGALNISKSFNPVFGSSKKFFS 845

Query: 766 ASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLR 813
           AS   SR+ S ATSP+S + S  R            +  + +DD+K+ NDSL+QE+IKLR
Sbjct: 846 ASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQEVIKLR 905

Query: 814 AQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +QVE LT K++  E ELERTSKQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 906 SQVESLTRKAQLQEIELERTSKQLKDAIAIAGEETAKCKAAKEVIKSLTAQ 956


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  983 bits (2542), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/894 (59%), Positives = 645/894 (72%), Gaps = 45/894 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+ VS+II GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 56  VLIWFSGKEEKHLRLSHVSKIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGDIQGTQ 118
           EAEVW  GLKALI+R  H KW+  + +    + ++SPR   R++SP  +PF  G   G+Q
Sbjct: 116 EAEVWFSGLKALISRSHHQKWRTESRSDGIPSEANSPRTYTRRSSPLNSPF--GSNDGSQ 173

Query: 119 ---------VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD--NS 167
                     P ++   NGL KAF+D++ Y         +DS S S   L++   D  + 
Sbjct: 174 KDADHHRLHSPYESPPKNGLDKAFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHG 233

Query: 168 NDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           + ++ A + FR+SLSS VSS S GS H+D  +LGDVFIWGEG+ +G LGGG HR G  F 
Sbjct: 234 HMKAMAVDAFRVSLSSAVSSLSQGSGHDDGGALGDVFIWGEGMGDGVLGGGTHRAGSYFG 293

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
            + D+L PKA+ES + LDV NIACG +HA LVTKQGEIFSWGEESGGRLGHG ++DV HP
Sbjct: 294 VKMDSLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHP 353

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           +LI+ LS  N+ELVACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G 
Sbjct: 354 KLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 413

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L+GIH+S ISCG WHTAVVTSAG LFTFGDG+FG LGHGD  S S+P+EVE+L+GLRT +
Sbjct: 414 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQ 473

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            +CGVWHTAAV+       +S S + S GKLFTWGDGDKGRLGHGDKE +L P CVA L+
Sbjct: 474 AACGVWHTAAVIEVM--VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 531

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           + N CQVACGH L+VA TTSGHVYTMGS  YGQLG P+ADG +PTRV+G++++SFVEE+A
Sbjct: 532 EPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIA 591

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CGAYHVA LTS ++VYTWGKGANG+LGHGD D+RNSP+LV+ LKDKQVK + CG +FTA 
Sbjct: 592 CGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAA 651

Query: 588 ICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPY 647
           ICLHKWVS VD S+CS C  PF F+RKRHNCYNCGLV+C +CSS+KSLKA++AP+ NK Y
Sbjct: 652 ICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAY 711

Query: 648 RVCDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQD 703
           RVCD+C+ KL+K   TD             QS  +R G+VN    E  D  E    R + 
Sbjct: 712 RVCDNCYNKLRKAIETDAS----------SQSSVSRRGSVNQGPREFIDEDEKLDFRSRA 761

Query: 704 QLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKK 762
           QL+  SS +S KQ ESR SK+N KLE   + V PV N   Q G +   KS   +  SSKK
Sbjct: 762 QLARFSSMESLKQAESR-SKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPMFGSSKK 820

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSP+S + S  R            S  + +DD+K+  +SLNQE+I
Sbjct: 821 FFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRNYESLNQEVI 880

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           KLRAQ+E LT K++  E ELERT+ QLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 881 KLRAQMESLTRKAQLQEVELERTTMQLKEAIAIAGEETAKCKAAKEVIKSLTAQ 934


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  981 bits (2536), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/890 (59%), Positives = 645/890 (72%), Gaps = 37/890 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 55  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 114

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+R  H KW+  + +    + ++SPR   R++SP  +PF        D
Sbjct: 115 EAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKD 174

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            GD      P ++   NGL KA  D++ Y          DS S S   +++   D+ +  
Sbjct: 175 CGDHLRLHSPYESPPKNGLDKAL-DVVLYAVPQKGFFPPDSASASVHSVSSGGSDSMHGH 233

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VS+SS GS H+D D+LGDVFIWGEG  +G LGGG HRVG     
Sbjct: 234 MKTMGMDAFRVSLSSAVSTSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGA 293

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+L PKA+ES + LDV NIACG RHA LVTKQGE+FSWGEESGGRLGHG ++DV HP+
Sbjct: 294 KMDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPK 353

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LIE LS  N+ELVACGEYH+CAVT SGDLYTWG+GTYN GLLGHG++VS W+P++V+G L
Sbjct: 354 LIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPL 413

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+SYISCG WHTAVVTSAG LFTFGDG+FGALGHGD  S S+PREVE+L+GLRT R 
Sbjct: 414 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRA 473

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SSS + S+    LFTWGDGDKGRLGH DKE +L P CVA L +
Sbjct: 474 ACGVWHTAAVVEVMVGNSSSSNCSSV--DLFTWGDGDKGRLGHVDKEAKLVPTCVA-LAE 530

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N+CQVACGH L+VALTTSG VYTMGS  YGQLG P ADG +P  V+G+++ESFVEE+AC
Sbjct: 531 HNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIAC 590

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+RN+PTLV+ LKDK VK + CG  FTA I
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKPYR
Sbjct: 651 CLHKWVSGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 710

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ-GPRLQDQLSI 707
           VCD+C  KL+KT       S ++SV     +R G+VN    EL D++ +   R ++QL+ 
Sbjct: 711 VCDNCLNKLRKTVE--TDASSHSSV-----SRRGSVNQGPLELIDKDDKLDSRSRNQLAR 763

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
            SS +S KQ ESR SK+N KLE   + V PV N   Q G +   KS   +  SSKK FSA
Sbjct: 764 FSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSA 823

Query: 767 SASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLRA 814
           S   SR+ S ATSP+S + S  R            S  + +DD+K+ NDSL+QE+IKLR+
Sbjct: 824 SVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLASPKIVVDDAKRTNDSLSQEVIKLRS 883

Query: 815 QVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           QVE LT K++  E ELERT+KQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 884 QVENLTRKAQLQEVELERTAKQLKDAIAIAGEETAKCKAAKEVIKSLTAQ 933


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  979 bits (2532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/891 (59%), Positives = 641/891 (71%), Gaps = 37/891 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+QVSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 56  VLIWFSGKEEKHLKLSQVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+R  H KW+  + +    + ++SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPMNSPFGSNESLQKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            GD      P ++   NGL KA  D++ Y          DS S S   +++   D+ +  
Sbjct: 176 SGDHLRLHSPYESPPKNGLDKAL-DVVLYAVPQKGFFPPDSASASVHSVSSGGSDSMHGQ 234

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VS+SS GS H+D D+LGDVFIWGEG  +G LGGG HRVG     
Sbjct: 235 MKTMGMDAFRVSLSSAVSTSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGV 294

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+L PK++ES + LDV NIACG RHA LVTKQGEIFSWGEE+GGRLGHG ++DV HP+
Sbjct: 295 KMDSLFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPK 354

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LIE LS  N+ELVACGEYHTCAVT SGDLYTWG+GTYN GLLGHG++VS W+P++V+G L
Sbjct: 355 LIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPL 414

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+SYISCG WHTAVVTSAG LFTFGDG+FGALGHGD  S S+PREVE+L+GLRT R 
Sbjct: 415 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRA 474

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-I 467
           +CGVWHTAAVV       +S S + S GKLFTWGDGDKGRLGHGDKE +L P  VA + +
Sbjct: 475 ACGVWHTAAVVEVM--VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNV 532

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
             N CQVACGH L+VALTT GHVYTMGS  YGQLG+P ADG +P  V+ +++ESFVEE+A
Sbjct: 533 KPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEIA 592

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CGAYHVA LTS ++VYTWGKGANG+LGHGD D+RN+PTLV+ LKDK VK + CG NFTA 
Sbjct: 593 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAA 652

Query: 588 ICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPY 647
           ICLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKPY
Sbjct: 653 ICLHKWVSGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPY 712

Query: 648 RVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ-GPRLQDQLS 706
           RVCD+CF KL+KT           S   S  +R G  N    EL D++ +   R ++QL+
Sbjct: 713 RVCDNCFNKLRKTVET-------DSSSHSSVSRRGVANQGPLELIDKDDKLDSRSRNQLA 765

Query: 707 ILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFS 765
             SS +S KQ ESR SK+N KLE   + V P+ N   Q G     KS   +  SSKK FS
Sbjct: 766 RFSSMESFKQVESRSSKKNKKLEFNSSRVSPIPNGGSQWGASNISKSFNPVFGSSKKFFS 825

Query: 766 ASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLR 813
           AS   SR+ S ATSP+S + S  R            S  + +DD+K+ NDSL+QE+IKLR
Sbjct: 826 ASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPNIVVDDAKRTNDSLSQEVIKLR 885

Query: 814 AQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +QVE LT K++  E ELERT+KQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 886 SQVENLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQ 936


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  972 bits (2513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/890 (58%), Positives = 646/890 (72%), Gaps = 35/890 (3%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE++LKL  VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 57  ILIWFSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 116

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+R  H KW+  + +    + ++SPR   R++SP  +PF        D
Sbjct: 117 EAEVWFSGLKALISRSHHRKWRPESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKD 176

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            GD      P ++   NGL KAF+D+I Y        R DS S S   +++   D+ +  
Sbjct: 177 SGDHLRLHSPYESPPKNGLDKAFSDVIYYPIPPMGFFRPDSASGSLHSVSSGGSDSMHGQ 236

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG+ +G LGGG H+VG +F  
Sbjct: 237 MKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGV 296

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+ES + LDV NIACG +HA LVTKQGE+FSWGEESGGRLGHG ++DV HP+
Sbjct: 297 KMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPK 356

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LIE LS  N+ELVACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G L
Sbjct: 357 LIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPL 416

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTAVVTS+G LFTFGDG+FGALGHGD  S S+PRE+E+L+GLRT + 
Sbjct: 417 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQA 476

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GKLFTWGDGDKGRLGHGDKE +L P CV  L++
Sbjct: 477 ACGVWHTAAVVEVMVGNSS--SSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVE 534

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH ++VAL+ SGHVYTMGS  YGQLG   ADG +P RV+G++++SFVEE+AC
Sbjct: 535 PN-CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIAC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++V+TWGKGANG+LGHGD ++RN+PTLV+ LKDKQVK + CG NFTA I
Sbjct: 594 GAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CS++KS+KA++AP+ NKPYR
Sbjct: 654 CLHKWVSGVDQSMCSGCRVPFNFKRKRHNCYNCGLVFCHSCSNKKSVKASMAPNPNKPYR 713

Query: 649 VCDDCFTKLKK-TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSI 707
           VCD+CF K++K T+T     S  +      +  +   N K  +L  R        +QL+ 
Sbjct: 714 VCDNCFNKIRKTTETDSSSQSSMSRRGSLNQGWSLEFNGKDDKLDSRS------HNQLAR 767

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
            SS +S KQ +SR SK+N KLE   + V P  N   Q G +   KS      SSKK FSA
Sbjct: 768 FSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSA 827

Query: 767 SASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLRA 814
           S   SR+ S ATSP+S + S  R            S  + +DD+K++ND+L+QE++KLR+
Sbjct: 828 SVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRS 887

Query: 815 QVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           QVE LT K++  E ELERT+KQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 888 QVENLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQ 937


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/892 (58%), Positives = 642/892 (71%), Gaps = 43/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 56  VLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF-------DF 111
           EAEVW  GLK LI+R  H KW+  + +    + ++SPR   R++SP  +PF         
Sbjct: 116 EAEVWFNGLKTLISRSHHRKWRTESRSDGMQSEANSPRTYTRRSSPLNSPFGSNDSLQKD 175

Query: 112 GDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD-NSNDR 170
           GD +  Q P  +   NG+ KA +D+I YT        +DS S S + L++   + +   +
Sbjct: 176 GDFR-LQSPYGSPPKNGMDKALSDVILYTVPPKGFFPSDSASISVNSLSSGSSEMHGPMK 234

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
           +   + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G LGGG H+VG  FS + 
Sbjct: 235 AMGIDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHKVGSCFSLKM 294

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D+LLPKA+ES + LDV NIACG RHA LVTKQGEIF+WGEESGGRLGHG ++DV  P+L+
Sbjct: 295 DSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLV 354

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           + L   N+ELV+CGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS WIP+K++G L+G
Sbjct: 355 DALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEG 414

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           IH+S I+CG WHTAVVTSAG LFTFGDG+FG LGHGD  S ++PREVE+L+GLRT R +C
Sbjct: 415 IHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAAC 474

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           GVWHTAAVV     SSS  S + S GKLFTWGDGDKGRLGHGDKE +L P CVA L+D N
Sbjct: 475 GVWHTAAVVEVMVGSSS--SSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPN 532

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            C+V+CGH ++VALTTSGHVYTMGS  YGQLG P ADG VP RV+G++++SFVEE+ACGA
Sbjct: 533 FCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGA 592

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           YHVA LTS ++VYTWGKGANG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA ICL
Sbjct: 593 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 591 HKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVC 650
           HKWVS  D S+CS CH PF F+RKRHNCYNCGLVFC +CSS+K  KA++AP+ NKPYRVC
Sbjct: 653 HKWVSGFDQSMCSGCHLPFNFKRKRHNCYNCGLVFCHSCSSKKCHKASMAPNPNKPYRVC 712

Query: 651 DDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQD--QL 705
           D+C+ KL+K   TD   + +               ++N  + +  ++E +   ++   QL
Sbjct: 713 DNCYNKLRKALETDASSQSSVSRRR----------SINQGSTDFVEKEEKPESVKSRAQL 762

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  SS +S KQ E++ SK+N K E   + V PV N   Q G I    + +F   SSKK F
Sbjct: 763 ARFSSMESVKQGENQFSKKNKKFECNSSRVSPVPNGGSQWGAISKSFNPVF--GSSKKFF 820

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR+ S ATSP+S ++S  R            S  + +DD+K+ NDSL+QE++KL
Sbjct: 821 SASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLTSPKIAVDDAKRTNDSLSQEVVKL 880

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +AQVE LT K++  E E+ERT+KQLK   A A  EA KC  A EVI SLT Q
Sbjct: 881 KAQVENLTRKAQLQEVEMERTTKQLKEALAFAAAEATKCNAAKEVIMSLTAQ 932


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/890 (58%), Positives = 640/890 (71%), Gaps = 35/890 (3%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE++LKL  VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 50  VLIWFSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 109

Query: 61  EAEVWLVGLKALITRGTHSKWKLG--TINCSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+RG H KW+    T    + ++SPR   R++SP  +PF        D
Sbjct: 110 EAEVWFSGLKALISRGHHWKWRPESRTDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKD 169

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            GD      P ++   NGL KAF+D++ Y          DS S S   +++   D+ +  
Sbjct: 170 SGDHLRLHSPYESPPKNGLDKAFSDVVYYPIPPMGFFPPDSASGSVHSVSSGGSDSMHGQ 229

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G LGGG H VG +F  
Sbjct: 230 MKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGAHHVGSNFGV 289

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+ES + LDV NIACG  HA +VTKQGE+FSWG ESGGRLGHG ++DV HP+
Sbjct: 290 KMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPK 349

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LIE LS  N+ELVACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G L
Sbjct: 350 LIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPL 409

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTAVVTS+G LFTFGDG+FG LGHGD  S S+PRE+E+L+GLRT + 
Sbjct: 410 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 469

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GKLFTWGDGDKGRLGHGDKE +L P  V  L +
Sbjct: 470 ACGVWHTAAVVEVMVGNSS--SSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDE 527

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH ++VAL+  GHVYTMGS  YG LG   ADG +PT V+G++++SFVEE+AC
Sbjct: 528 PNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKLSKSFVEEIAC 587

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++V+TWGKGANG LGHGD ++RN+PTLV+ LKDKQVK + CG NFTA I
Sbjct: 588 GAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 647

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGL FC +CS++KS+KA++AP+ NKPYR
Sbjct: 648 CLHKWVSGVDQSMCSGCRVPFNFKRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYR 707

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ-GPRLQDQLSI 707
           VCD+CF K++K       T+   S  Q+  +R G+VN  + E   ++ +   R  +QL+ 
Sbjct: 708 VCDNCFNKIRK-------TTETDSSSQASMSRRGSVNQGSLEFNGKDDKLDSRSHNQLAR 760

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
            SS +S KQ +SR SK+N KLE   + V P  N   Q G +   KS   +  SSKK FSA
Sbjct: 761 FSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPVFGSSKKFFSA 820

Query: 767 SASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLRA 814
           S   SR+ S ATSP+S + S  R            S  + +DD+K++ND+L+QE++KLR+
Sbjct: 821 SVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKIVVDDAKRINDNLSQEVVKLRS 880

Query: 815 QVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           QVE LT K++  E ELERT+KQLK   AIA +E  KCK A EVIKSLT Q
Sbjct: 881 QVENLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQ 930


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/892 (58%), Positives = 640/892 (71%), Gaps = 41/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 61  VLIWFSGKEEKHLRLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 120

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQG- 116
           EAEVW  GLKALI+R  H K +  + +    S+  SPR   R++SP  +PF   D +Q  
Sbjct: 121 EAEVWFSGLKALISRSHHRKSRTESRSDGILSEVNSPRTYTRRSSPLNSPFGSNDSLQKD 180

Query: 117 -----TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD--NSND 169
                   P ++   NGL K F+D++ Y         +DS S S   L++   D  + + 
Sbjct: 181 ADHLRIHSPYESPPKNGLDKTFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHM 240

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           ++ A + FR+SLSS VSSSS GS H+D +++GDVFIWGEG  +G LGGG HRVG  F  +
Sbjct: 241 KAVAMDAFRVSLSSAVSSSSQGSGHDDGEAMGDVFIWGEGTGDGVLGGGTHRVGSFFGVK 300

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D+LLPKA+ES + LDV NIACG +HA LVTKQGEIFSWGEESGGRLGHG ++DV HPQL
Sbjct: 301 MDSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQL 360

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE LS  N+E VACGEYHTCAVT SGDLYTWGDGTYN GLLGHG++VS W+P++V+G L+
Sbjct: 361 IEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 420

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GIH+S ISCG WHTAVV+SAG LFTFGDG+FG LGHGD  S S+PREVE+L+GLRT + +
Sbjct: 421 GIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAA 480

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV     +SS  S + S GKLFTWGDGDKGRLGHGDKE +L P CV+ L++ 
Sbjct: 481 CGVWHTAAVVEVMVGNSS--SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEP 538

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           N CQVACGH L++A TTSGHVYTMGS  YGQLG P +DG +P RV+G+++ S VEE+ACG
Sbjct: 539 NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACG 598

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           AYHVA LTS ++VYTWGKGANG+LGHGD D++N P+LV+ LKDKQVK + CG NFTA IC
Sbjct: 599 AYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAIC 658

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS VD S+CS C  P  F+RKRHNCYNCGLV+C +CSS+KSLKA++AP+ NK YRV
Sbjct: 659 LHKWVSGVDQSMCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRV 718

Query: 650 CDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQL 705
           CD+C+ KL+K   TD             QS  +R G+VN   +E  D+ E    R + QL
Sbjct: 719 CDNCYNKLRKAMETDAS----------SQSSVSRRGSVNQGPSEFIDKDEKLDTRSRAQL 768

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  SS +S KQ ESR SK+N KLE   + V PV N   Q G     KS   +  SSKK F
Sbjct: 769 ARFSSMESLKQAESR-SKRNKKLEFNSSRVSPVPNGGSQWGAFNISKSFNPMFASSKKFF 827

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR+ S ATSP+S + S  R            S  + +DD+K+ N+SL+QE++KL
Sbjct: 828 SASVPGSRIISRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNESLSQEVLKL 887

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RAQVE L+ K++  E ELER +++LK   AIA +E  KCK A EVIKSLT Q
Sbjct: 888 RAQVENLSHKTQLQEVELERITERLKEARAIAGEETAKCKAAKEVIKSLTAQ 939


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/892 (58%), Positives = 639/892 (71%), Gaps = 39/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKE QSFSLIYN+RSLDLICKDKD
Sbjct: 53  ILIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKECQSFSLIYNERSLDLICKDKD 112

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQ-- 115
           E EVW  GLKALI+R  + KW+  + +    S+  SPR   +++SP  +PF   D +Q  
Sbjct: 113 ETEVWFSGLKALISRIHNRKWRTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKE 172

Query: 116 -GTQV----PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            G  +    P  +    GL KA +D++ Y         +DS S S   L++   D+ +  
Sbjct: 173 GGEPIRLHSPYGSPPKYGLDKALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGH 232

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VSSSS GS ++D D+LGDVFIWGEG   G LGGG  RVG SF  
Sbjct: 233 MKTVPMDAFRVSLSSAVSSSSQGSGNDDCDALGDVFIWGEGTGEGVLGGGTRRVGSSFDS 292

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+ES + LDV NIACG RHA LVTKQGE+FSWGEE GGRLGHG ++D  HP+
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ LS +N+ELVACGEYHTCAVT SGDLYTWGDGTYNSGLLGHG  VS W+P++V+G L
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
            G+H+S ISCG WHTA+VTSAG LFTFGDG+FG LGHGD  S SIPREVE+L+GLRT R 
Sbjct: 413 QGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRA 472

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     + +  S + S GKLFTWGDGDKGRLGHGDKE RL P CVA L++
Sbjct: 473 ACGVWHTAAVVEVIIGNPN--SNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVE 530

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALT SGH+YTMGS  YGQLG P ADG +P RV+G++++SFVEE+AC
Sbjct: 531 PNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELAC 590

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D+RN+PTLV+ LKDKQVK + CG NFTA I
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NK YR
Sbjct: 651 CLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYR 710

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ---GPRLQDQL 705
           VCD+C+ KLKK   ++  +S      QS  +R G++N  + E  ++  +    PR   QL
Sbjct: 711 VCDNCYHKLKKF-IEMDTSS------QSSLSRRGSINQGSTEPVNKNDKLDLKPR--SQL 761

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           + L S +S KQ ES+ SK+N KLE   + V P+ +   Q G +   KS   +  SSKK F
Sbjct: 762 ARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVFGSSKKFF 821

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           +AS   SR+ S ATSP+S + S  R            S  + ++D+K  N+ L+QE+I+L
Sbjct: 822 AASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRL 881

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RAQVE LT K++  E ELERTSKQLK   +IA +EA +C  A EVIKSLT Q
Sbjct: 882 RAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQ 933


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/892 (57%), Positives = 635/892 (71%), Gaps = 39/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKE QSFSLIYN+RSLDLICKDKD
Sbjct: 53  ILIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKECQSFSLIYNERSLDLICKDKD 112

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQ-- 115
           E EVW  GLKALI+R  + KW+  + +    S+  SPR   +++SP  +PF   D +Q  
Sbjct: 113 ETEVWFSGLKALISRIHNRKWRTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKE 172

Query: 116 -GTQV----PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
            G  +    P  +    GL KA +D++ Y         +DS S S   L++   D+ +  
Sbjct: 173 GGEPIRLHSPYGSPPKYGLDKALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGH 232

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            ++   + FR+SLSS VSSSS GS ++D D+LGD F  GEG   G LGGG  RVG SF  
Sbjct: 233 MKTVPMDAFRVSLSSAVSSSSQGSGNDDCDALGDXFYLGEGTGEGVLGGGTRRVGSSFDS 292

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+ES + LDV NIACG RHA LVTKQGE+FSWGEE GGRLGHG ++D  HP+
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ LS +N+ELVACGEYHTCAVT SGDLYTWGDGTYNSGLLGHG  VS W+P++V+G L
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
            G+H+S ISCG WHTA+VTSAG LFTFGDG+FG LGHGD  S SIPREVE+L+GLRT R 
Sbjct: 413 QGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRA 472

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     + +  S + S GKLFTWGDGDKGRLGHGDKE RL P CVA L++
Sbjct: 473 ACGVWHTAAVVEVIIGNPN--SNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVE 530

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALT SGH+YTMGS  YGQLG P ADG +P RV+G++++SFVEE+AC
Sbjct: 531 PNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELAC 590

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D+RN+PTLV+ LKDKQVK + CG NFTA I
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS VD S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NK YR
Sbjct: 651 CLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYR 710

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ---GPRLQDQL 705
           VCD+C+ KL K   ++  +S      QS  +R G++N  + E  ++  +    PR   QL
Sbjct: 711 VCDNCYHKLXKF-IEMDTSS------QSSLSRRGSINQGSMEPVNKNDKLDLKPR--SQL 761

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           + L S +S KQ ES+ SK+N KLE   + V P+ +   Q G +   KS   +  SSKK F
Sbjct: 762 ARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVFGSSKKFF 821

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           +AS   SR+ S ATSP+S + S  R            S  + ++D+K  N+ L+QE+I+L
Sbjct: 822 AASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRL 881

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RAQVE LT K++  E ELERTSKQLK   +IA +EA +C  A EVIKSLT Q
Sbjct: 882 RAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQ 933


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/875 (56%), Positives = 632/875 (72%), Gaps = 35/875 (4%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYSGKEE+Q+KL+QV RI+PGQRT TF+RYPRPEKEYQSFSLI  DRSLDLICKDKDE
Sbjct: 63  LVWYSGKEEKQIKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDE 122

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
           AEVW+VGLK+LITR   SKWK       TS++ P    R+ SP VT  D    Q  Q   
Sbjct: 123 AEVWVVGLKSLITRVKVSKWKTTIKPEITSAECPTPHARRVSPFVTILD----QVIQPSN 178

Query: 122 DNVSNNGLGKAFADIISYTEAANTNSRADS-----VSFSPSPLTNAFPDNSNDRSSAAET 176
           +  +   LGK F+DI++ T   + N++ ++       FSP+P   A  +NSN R S  + 
Sbjct: 179 ETSTQTRLGKVFSDIVAITAPPSNNNQTEASGNLFCPFSPTP---ANVENSNLRFSTNDP 235

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT-DALLP 235
           FR+SLSS VS+SSHGS HEDFD+LGDVF+WGE I++G L G     G S +  T DALLP
Sbjct: 236 FRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSG----TGNSLNSTTEDALLP 291

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           KA+EST+ LD  NIACG  HAVLVTKQGEIFSWGE  GG+LGHG E D   P+ I  + G
Sbjct: 292 KALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRG 351

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +  + +ACG++HTCA+T+SGDLY+WGDGT+N  LLGHG++ SCWIP++V+G+L G+++S 
Sbjct: 352 LGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSD 411

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG WHTAVV S+G LFTFGDG+FGALGHGD  STS+PREVE+L GL  T+V+CGVWHT
Sbjct: 412 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 471

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AAVV  T+ +S +   S S G++FTWGDG+KG+LGHGD + +L PECV  L +ENICQVA
Sbjct: 472 AAVVEVTNEASEAEVDS-SRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVA 530

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CGH L+V+ T+ GHVYTMGS AYGQLG P A G  P RV+G+I E+ VEE+ACG+YHVA 
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 590

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
           LTS S++YTWGKG NGQLGHG+ +N+  P +V FL++KQVK + CG NFTA+IC+HKWV 
Sbjct: 591 LTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVP 650

Query: 596 SVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT 655
             +HS+C+ C NPF FRRKRHNCYNCGLVFCK CSSRKSL+AALAP +NKPYRVC  CFT
Sbjct: 651 GSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFT 710

Query: 656 KLKKTDTKLKRTSGYTSVVQSPRNRTGNV--NHKTAELADREAQGPRLQDQLSILSSFDS 713
           KLKK+           S   +P +RT  +    K+ ++++R++   +     + LSS DS
Sbjct: 711 KLKKS---------RESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADS 761

Query: 714 NKQ-TESRLSKQNLKLELQDNHVYP-VNKNLQ-MGRIYSPKSSIFLAKSSKKKFSASASS 770
           +   +E R  +++LK E+ +++V+P +N +LQ +G  +S K S  L K  K         
Sbjct: 762 SLHYSERRHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFS-KGSTALPKIPKNMM-VKIPG 819

Query: 771 SRMSSLATSPVSGKSSSARSS-AVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAE 829
           S MSS  TSPVS KS+S R S  V   +SKQ+ DS NQ++  L+ QVE+L SK+  LE E
Sbjct: 820 SGMSSRTTSPVSVKSTSPRRSYEVAAAESKQLKDSFNQDMAGLKEQVEQLASKAHQLEEE 879

Query: 830 LERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           LE+T +QLK VTA+A DEAE+ ++A EVI+SLT Q
Sbjct: 880 LEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQ 914


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/892 (58%), Positives = 630/892 (70%), Gaps = 48/892 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+LN VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  ILIWFSGKEEKQLRLNHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+R    KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFAGLKTLISRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             +    + P  +    GL KAF+DI+SYT        +DS   S   +++   DN+N  
Sbjct: 176 GAENYRLRSPYGSPPKVGLEKAFSDIVSYTAPPRPFFPSDSNVGSVHSVSSGHSDNTNGH 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVF+WGEG   G LGGG  R G S   
Sbjct: 236 SRGLPMDNFRVSLSSAVSSSSHGSGHDDGDALGDVFMWGEGTGEGILGGGNSRFGNSSGA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D LLPK +E    LDV NI+CG RHA LVTKQGE++SWGEESGGRLGHG + DV  P+
Sbjct: 296 KMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           L+E L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT+N GLLGHG++VS W+P++++G L
Sbjct: 356 LVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTAVVTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           +CGVWHTAAVV V   +SS+S   + S GK+FTWGDGDKGRLGHGDK+ RL P CVA L+
Sbjct: 476 ACGVWHTAAVVEVMVGNSSTS---NCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLV 532

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           + N CQVACGH  +VALTTSGHVYTMGS+ YGQLG P ADG+VP RV+G++ ++FVEE++
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEIS 592

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CGAYHVA LTS ++VYTWGKGANG+LGHGD D+RNSPTLV+ LKDKQV+ VVCG+NFTA 
Sbjct: 593 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAA 652

Query: 588 ICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPY 647
           IC+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPY
Sbjct: 653 ICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPY 712

Query: 648 RVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSI 707
           RVCD+C+ KL K     + +S     V    N   N   +T           R   QLS 
Sbjct: 713 RVCDNCYCKLNKGPETDRYSSAKRGAVLQGFNDPINEELET-----------RSNVQLSR 761

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKF 764
           LSS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK F
Sbjct: 762 LSSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFF 815

Query: 765 SASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR+ S ATSPVS +SS  R            S  V +D +K M D LNQE+I L
Sbjct: 816 SASVPGSRIVSRATSPVSRRSSPPRSTTPTPTLGGLTSPRVVVDGAKPMKDGLNQEVINL 875

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           R+QVE LT KS  LE ELERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 876 RSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 927


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/875 (56%), Positives = 632/875 (72%), Gaps = 35/875 (4%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYSGKEE+Q+KL+QV RI+PGQRT TF+RYPRPEKEYQSFSLI  DRSLDLICKDKDE
Sbjct: 50  LVWYSGKEEKQIKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDE 109

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
           AEVW+VGLK+LITR   SKWK       TS++ P    R+ SP VT  D    Q  Q   
Sbjct: 110 AEVWVVGLKSLITRVKVSKWKTTIKPEITSAECPTPHARRVSPFVTILD----QVIQPSN 165

Query: 122 DNVSNNGLGKAFADIISYTEAANTNSRADS-----VSFSPSPLTNAFPDNSNDRSSAAET 176
           +  +   LGK F+DI++ T   + N++ ++       FSP+P   A  +NSN R S  + 
Sbjct: 166 ETSTQTRLGKVFSDIVAITAPPSNNNQTEASGNLFCPFSPTP---ANVENSNLRFSTNDP 222

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT-DALLP 235
           FR+SLSS VS+SSHGS HEDFD+LGDVF+WGE I++G L G     G S +  T DALLP
Sbjct: 223 FRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSG----TGNSLNSTTEDALLP 278

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           KA+EST+ LD  NIACG  HAVLVTKQGEIFSWGE  GG+LGHG E D   P+ I  + G
Sbjct: 279 KALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRG 338

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +  + +ACG++HTCA+T+SGDLY+WGDGT+N  LLGHG++ SCWIP++V+G+L G+++S 
Sbjct: 339 LGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSD 398

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG WHTAVV S+G LFTFGDG+FGALGHGD  STS+PREVE+L GL  T+V+CGVWHT
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 458

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AAVV  T+ +S +   S S G++FTWGDG+KG+LGHGD + +L PECV  L +ENICQVA
Sbjct: 459 AAVVEVTNEASEAEVDS-SRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVA 517

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CGH L+V+ T+ GHVYTMGS AYGQLG P A G  P RV+G+I E+ VEE+ACG+YHVA 
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 577

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
           LTS S++YTWGKG NGQLGHG+ +N+  P +V FL++KQVK + CG NFTA+IC+HKWV 
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVP 637

Query: 596 SVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT 655
             +HS+C+ C NPF FRRKRHNCYNCGLVFCK CSSRKSL+AALAP +NKPYRVC  CFT
Sbjct: 638 GSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFT 697

Query: 656 KLKKTDTKLKRTSGYTSVVQSPRNRTGNV--NHKTAELADREAQGPRLQDQLSILSSFDS 713
           KLKK+           S   +P +RT  +    K+ ++++R++   +     + LSS DS
Sbjct: 698 KLKKS---------RESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADS 748

Query: 714 NKQ-TESRLSKQNLKLELQDNHVYP-VNKNLQ-MGRIYSPKSSIFLAKSSKKKFSASASS 770
           +   +E R  +++LK E+ +++V+P +N +LQ +G  +S K S  L K  K         
Sbjct: 749 SLHYSERRHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFS-KGSTALPKIPKNMM-VKIPG 806

Query: 771 SRMSSLATSPVSGKSSSARSS-AVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAE 829
           S MSS  TSPVS KS+S R S  V   +SKQ+ DS NQ++  L+ QVE+L SK+  LE E
Sbjct: 807 SGMSSRTTSPVSVKSTSPRRSYEVAAAESKQLKDSFNQDMAGLKEQVEQLASKAHQLEEE 866

Query: 830 LERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           LE+T +QLK VTA+A DEAE+ ++A EVI+SLT Q
Sbjct: 867 LEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQ 901


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  932 bits (2408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/874 (56%), Positives = 631/874 (72%), Gaps = 33/874 (3%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYSGKEE+Q+KL+QV RI+PGQRT+TF+RYPRPEKEYQSFSLI  DRSLDLICKDKDE
Sbjct: 50  LVWYSGKEEKQIKLSQVLRIVPGQRTSTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDE 109

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
           AEVW+VGLK+LITR   SKWK       TS++ P    R+ SP VT  D    Q  Q   
Sbjct: 110 AEVWVVGLKSLITRVKVSKWKNTIKPEITSAECPTPHARRVSPFVTILD----QVIQPSN 165

Query: 122 DNVSNNGLGKAFADIISYTEAANTNSRADSVS-----FSPSPLTNAFPDNSNDRSSAAET 176
           +  +   LGK F+DI+S T   + N++ ++ +     FSP+P+     +NS+ R S  + 
Sbjct: 166 ETSTQTRLGKVFSDIVSITAPPSNNNQTETSANLFCPFSPTPVN---VENSSLRFSTNDP 222

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT-DALLP 235
            R+SLSS VS+SSHGS HEDFD+LGDVF+WGE I +G L G     G S +  T D LLP
Sbjct: 223 IRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTG----TGNSLNSTTEDVLLP 278

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           KA+EST+ LD  NIACG  HAVLVTKQGEIFSWGE  GG+LGHG E DV  P+ I  + G
Sbjct: 279 KALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRG 338

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +  + +ACG++HTCA+T+SGDLY+WGDGT+N  LLGHG++ SCWIP++V+G L G+++SY
Sbjct: 339 LGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSY 398

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG WHTAVV S+G LFTFGDGSFGALGHGD  STS+PREV+ L GL  T+V+CGVWHT
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AA+V  T+ +S +  GS S G++FTWGDG+KG+LGHGD + +L PECV  L +ENICQVA
Sbjct: 459 AALVEVTNEASEAEVGS-SRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVA 517

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CGH L+V+LT++GHVYTMGS AYGQLG P A G  P RV+G+I E+ VEE+ACG+YHVA 
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAV 577

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
           LTS S++YTWGKG NGQLGHG  +N+  P +V FLK+KQVK + CG NFTA+IC+HKWV 
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVICVHKWVP 637

Query: 596 SVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT 655
             +HS+C+ C NPF FRRKRHNCYNCGLVFCK CSSRKSL+AALAP +NKPYRVC  CFT
Sbjct: 638 GSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFT 697

Query: 656 KLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNK 715
           KLKK  ++   TS  TS  +   N       K+ ++++R++   +     + +SS DS  
Sbjct: 698 KLKK--SREPSTSTPTSRARKLLNM-----RKSTDVSERDSLTQKFLSAHARISSADSLL 750

Query: 716 QT-ESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSP--KSSIFLAKSSKKKFSASASSS 771
              E R  +++LK E+ +++V+P +N +LQ+  + SP  K S  L K  K         S
Sbjct: 751 HYGERRHHRRDLKPEVNNSNVFPSMNGSLQL--VGSPLSKGSTALPKIPKNMM-VKIPGS 807

Query: 772 RMSSLATSPVSGKSSSARSS-AVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAEL 830
            MSS  TSPVS KS+S R S  V   +SKQ+ DS N ++  L+ QVE+LTSK+  LE EL
Sbjct: 808 GMSSRTTSPVSVKSTSPRRSYEVAAAESKQIKDSFNHDMAGLKEQVEQLTSKTHQLEEEL 867

Query: 831 ERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           E+T +QLK VTA+A DEAE+ ++A EVI+SLT Q
Sbjct: 868 EKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQ 901


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/888 (55%), Positives = 629/888 (70%), Gaps = 42/888 (4%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           ++WY  KEE+QL+L  VSRIIPGQRTA FQ+YPRPEKEYQSFSLI NDRSLDLICKDKDE
Sbjct: 72  VVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLICNDRSLDLICKDKDE 131

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
           AEVW+ GLKA+ITRG   K K    + +  SDSP  +  + + + +  D GD Q T+   
Sbjct: 132 AEVWITGLKAIITRGRSRKGKYDARSETVFSDSPHGQ--RVTTSTSSIDQGDNQRTE--- 186

Query: 122 DNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISL 181
            ++  + LGKA+ADII YT A  + +  ++ SF+ S L+    DNSN RSS A+TFR+SL
Sbjct: 187 -SLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSSTADTFRVSL 245

Query: 182 SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           SS +SSSS GS  EDFD+LGDVFIWGEG  NG LGGG+HR+G S   + DA  PK++ES+
Sbjct: 246 SSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESS 305

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
           + LDV NI+CG RHA+LVTKQGE FSWGEE+GGRLGHG E DVSHP+LI+   G+NVEL+
Sbjct: 306 VVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELI 365

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACGEYH+CAVT SGDLYTWGDG  +SGLLGH S+ S WIP+KV G ++G+ +S++SCG W
Sbjct: 366 ACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPW 425

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           HTA++TSAG LFTFGDG+FGALGHGD      PREVET  GL+T +V+CGVWHTAAVV  
Sbjct: 426 HTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVEL 485

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                S PS + S G LFTWGDGDKG+LGHGD +PRL P+C+  L+D++  +VAC + ++
Sbjct: 486 MSGLDSRPSDAPS-GTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMT 544

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           VALTT+G VYTMGS  YGQLG P+A+G+ P  V+  + +S VEE++CG++HVA LTS ++
Sbjct: 545 VALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTE 604

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSV 601
           VYTWGKG NGQLGHGD +N+ +PTLVD L+DKQVKR+VCG NF+A IC+H W  S D+S+
Sbjct: 605 VYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSI 664

Query: 602 CSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTD 661
           C  C  PF FRRKRHNCYNCG VFCKACSS+KSLKA+LAPS +KPYRVCDDC+ KL+K  
Sbjct: 665 CFGCRIPFNFRRKRHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKA- 723

Query: 662 TKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRL 721
                +  ++ V   P+ + GN  +K +E  D+E+  P L    S LSS DS  + + R+
Sbjct: 724 ---IESEPFSRV---PKVKAGNALYKASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRI 777

Query: 722 SKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPV 781
           S+ +   + ++      N+N         KS I   + SK  FSAS  S+R+   +TSP+
Sbjct: 778 SRVD---QYENRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPSTRVVPQSTSPL 834

Query: 782 SGKSSS-----------ARSSAVTIDDSKQMNDSLNQEIIKLRAQ--------------V 816
            GK+S+            R++ V +D+ K +NDSL+QE+ +L+AQ              +
Sbjct: 835 LGKASALWSAIPAPYPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGL 894

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           EEL SKS+ LEAEL R +KQL   TA A  EAEK + A  VIKSLT Q
Sbjct: 895 EELASKSQLLEAELGRKTKQLMDATAKAAVEAEKRRAAKHVIKSLTAQ 942


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/889 (56%), Positives = 623/889 (70%), Gaps = 39/889 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW SGKEE+ LKL+ VSRIIPGQRT  FQRYPRPEKEYQSFSLIY+DRSLDLICKDK+
Sbjct: 52  VLIWISGKEEKHLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKE 111

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLKALI+     K +  T N    + ++SPRA   ++SP    F        D
Sbjct: 112 EAEVWFTGLKALISNRQIWKKREETTNDGLLSEANSPRAYTIRSSPLSFAFGSDDSSLKD 171

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDR 170
             D    + P D+  N GL KA +D++ YT         +S             D +  R
Sbjct: 172 GMDPLRLRTPYDSPPNTGLEKALSDVV-YTVPPKVLFPLESACAPAQSQLLGGSDETTGR 230

Query: 171 SSAAET--FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +    T  FR+SLSS VSSSS GS  ++ D+LGDV+IWGEG  +G LGGG HR+G S   
Sbjct: 231 AKVTNTDNFRVSLSSAVSSSSQGSGRDENDALGDVYIWGEGTGDGILGGGVHRIGGS-GV 289

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           Q D+ +PKA+ES + LDV  IACG +HA LVTKQGE+FSWGEE GGRLGHG ++DVSHP+
Sbjct: 290 QMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            ++ L   NVELVACGEYH+CAVT SGDLY WG   YN GLLG GS+ + W+PRK+ G L
Sbjct: 350 FVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPL 409

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S +SCG WHTAVVTSAG LFTFGDG+FG LGHGD IS SIPREVE+L+GLRT R 
Sbjct: 410 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRA 469

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SS+S   + S GKLFTWGDGDK RLGHGDKE RL P CVA L++
Sbjct: 470 ACGVWHTAAVVEIMVGSSNS--SNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVE 527

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+ ALTT+G VYTMGS  YGQLG P ADG++PTRV+G++ ++FVEE+AC
Sbjct: 528 PNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGMLPTRVEGKLMKNFVEELAC 587

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+RNSP++V+ LKDKQVK +VCG +FTA I
Sbjct: 588 GAYHVAVLTSRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKWVS +D S+CS CH PF F+RKRHNCYNCGLVFC +CS++KSLKA++AP+ NKPYR
Sbjct: 648 CLHKWVSGIDQSMCSGCHLPFNFKRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYR 707

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSI 707
           VCD+C        +KL+R+S   S V S  +R G+VN    E+A++ E    +   +L  
Sbjct: 708 VCDNCL-------SKLRRSSETDSSVHSALSRRGSVNQGLNEVAEKTENSNSKSHAKLGR 760

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSAS 767
             S +S+K+ ES  S++N K       V P   ++     ++   S     SSKK FSAS
Sbjct: 761 NFSMESSKEVESISSRRNRKSNSNSIQVSPSGNDVSRRNTFNNSKSF---GSSKKFFSAS 817

Query: 768 ASSSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIKLRAQ 815
              SR+ S ATSP S +SS  R++  T            +D + ++NDSL +EI+KLRAQ
Sbjct: 818 LPGSRIVSRATSPTSRRSSPPRAATPTPTLSANELPKLAVDGAGRLNDSLREEIVKLRAQ 877

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VEELT+K++  + ELERT+KQLK   A+AE+E  KCK A EVIKSLT Q
Sbjct: 878 VEELTNKAQLQDVELERTTKQLKEAIAVAEEETTKCKAAKEVIKSLTAQ 926


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  928 bits (2398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/889 (58%), Positives = 638/889 (71%), Gaps = 45/889 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+L+ VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 101 ILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 160

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LITR    KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 161 EAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 220

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
            G+    + P  +    GL KAF+DI+SY         +DS + S   +++   DN+N  
Sbjct: 221 GGENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLH 280

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S   
Sbjct: 281 SRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNS-GV 339

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV  P+
Sbjct: 340 KMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPK 399

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT NSGLLGHG++VS W+P++V+G L
Sbjct: 400 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 459

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 460 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRA 519

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SSS   + S GK+FTWGDGDKGRLGHGDK+ RL P CVA L++
Sbjct: 520 ACGVWHTAAVVEVMVGNSSS--SNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 577

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQ+ACGH ++VALTTSGHVYTMGS  YGQLG P ADG++P RV+G++ ++FVEE++C
Sbjct: 578 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISC 637

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+R+SPTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAI 697

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC ACSS+KSLKA+LAP+ NKPYR
Sbjct: 698 CIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYR 757

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL K       T  Y+S       + G+V     +  D E +  +   QLS L
Sbjct: 758 VCDSCYSKLNKG----PETDRYSSA------KRGSVIQGFNDSVDEELET-KSNAQLSRL 806

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKFS 765
           SS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK FS
Sbjct: 807 SSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFFS 860

Query: 766 ASASSSRMSSLATSPVSGKSSSARS----------SAVTIDDSKQMNDSLNQEIIKLRAQ 815
           AS   SR+ S ATSPVS ++S  RS          ++  + D  + NDS++QE++ LR+Q
Sbjct: 861 ASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQ 920

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT KS+ LEA+LERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 921 VENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 969


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  928 bits (2398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/889 (58%), Positives = 638/889 (71%), Gaps = 44/889 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+L+ VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 101 ILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 160

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGD----- 113
           EAEVW  GLK LITR    KW+  + +   S+ + SPR   R++SP  +PF   D     
Sbjct: 161 EAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 220

Query: 114 -IQGTQV--PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
            ++  ++  P  +    GL KAF+DI+SY         +DS + S   +++   DN+N  
Sbjct: 221 GVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLH 280

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S   
Sbjct: 281 SRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGV 340

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
             D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV  P+
Sbjct: 341 NMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPK 400

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT NSGLLGHG++VS W+P++V+G L
Sbjct: 401 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 460

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 461 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRA 520

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ RL P CVA L++
Sbjct: 521 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 578

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQ+ACGH ++VALTTSGHVYTMGS  YGQLG P ADG++P RV+G++ ++FVEE++C
Sbjct: 579 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISC 638

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+R+SPTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 698

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC ACSS+KSLKA+LAP+ NKPYR
Sbjct: 699 CIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYR 758

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL K       T  Y+S       + G+V     +  D E +  +   QLS L
Sbjct: 759 VCDSCYSKLNKG----PETDRYSSA------KRGSVIQGFNDSVDEELE-TKSNAQLSRL 807

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKFS 765
           SS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK FS
Sbjct: 808 SSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFFS 861

Query: 766 ASASSSRMSSLATSPVSGKSSSARS----------SAVTIDDSKQMNDSLNQEIIKLRAQ 815
           AS   SR+ S ATSPVS ++S  RS          ++  + D  + NDS++QE++ LR+Q
Sbjct: 862 ASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQ 921

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT KS+ LEA+LERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 922 VENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 970


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/889 (58%), Positives = 638/889 (71%), Gaps = 44/889 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+L+ VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 55  ILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 114

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGD----- 113
           EAEVW  GLK LITR    KW+  + +   S+ + SPR   R++SP  +PF   D     
Sbjct: 115 EAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 174

Query: 114 -IQGTQV--PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
            ++  ++  P  +    GL KAF+DI+SY         +DS + S   +++   DN+N  
Sbjct: 175 GVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLH 234

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S   
Sbjct: 235 SRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGV 294

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
             D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV  P+
Sbjct: 295 NMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPK 354

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT NSGLLGHG++VS W+P++V+G L
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 415 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRA 474

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ RL P CVA L++
Sbjct: 475 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQ+ACGH ++VALTTSGHVYTMGS  YGQLG P ADG++P RV+G++ ++FVEE++C
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISC 592

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+R+SPTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC ACSS+KSLKA+LAP+ NKPYR
Sbjct: 653 CIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYR 712

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL K       T  Y+S       + G+V     +  D E +  +   QLS L
Sbjct: 713 VCDSCYSKLNKG----PETDRYSSA------KRGSVIQGFNDSVDEELE-TKSNAQLSRL 761

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKFS 765
           SS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK FS
Sbjct: 762 SSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFFS 815

Query: 766 ASASSSRMSSLATSPVSGKSSSARS----------SAVTIDDSKQMNDSLNQEIIKLRAQ 815
           AS   SR+ S ATSPVS ++S  RS          ++  + D  + NDS++QE++ LR+Q
Sbjct: 816 ASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQ 875

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT KS+ LEA+LERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 876 VENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 924


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/904 (54%), Positives = 629/904 (69%), Gaps = 58/904 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           ++WY  KEE+QL+L  VSRIIPGQRTA FQ+YPRPEKEYQSFSLI NDRSLDLICKDKDE
Sbjct: 72  VVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLICNDRSLDLICKDKDE 131

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
           AEVW+ GLKA+ITRG   K K    + +  SDSP  +  + + + +  D GD Q T+   
Sbjct: 132 AEVWITGLKAIITRGRSRKGKYDARSETVFSDSPHGQ--RVTTSTSSIDQGDNQRTE--- 186

Query: 122 DNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISL 181
            ++  + LGKA+ADII YT A  + +  ++ SF+ S L+    DNSN RSS A+TFR+SL
Sbjct: 187 -SLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSSTADTFRVSL 245

Query: 182 SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           SS +SSSS GS  EDFD+LGDVFIWGEG  NG LGGG+HR+G S   + DA  PK++ES+
Sbjct: 246 SSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESS 305

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
           + LDV NI+CG RHA+LVTKQGE FSWGEE+GGRLGHG E DVSHP+LI+   G+NVEL+
Sbjct: 306 VVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELI 365

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACGEYH+CAVT SGDLYTWGDG  +SGLLGH S+ S WIP+KV G ++G+ +S++SCG W
Sbjct: 366 ACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPW 425

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           HTA++TSAG LFTFGDG+FGALGHGD      PREVET  GL+T +V+CGVWHTAAVV  
Sbjct: 426 HTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVEL 485

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                S PS + S G LFTWGDGDKG+LGHGD +PRL P+C+  L+D++  +VAC + ++
Sbjct: 486 MSGLDSRPSDAPS-GTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMT 544

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           VALTT+G VYTMGS  YGQLG P+A+G+ P  V+  + +S VEE++CG++HVA LTS ++
Sbjct: 545 VALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTE 604

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSV 601
           VYTWGKG NGQLGHGD +N+ +PTLVD L+DKQVKR+VCG NF+A IC+H W  S D+S+
Sbjct: 605 VYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSI 664

Query: 602 CSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTD 661
           C  C  PF FRRKRHNCYNCG VFCKACSS+KSLKA+LAPS +KPYRVCDDC+ KL+K  
Sbjct: 665 CFGCRIPFNFRRKRHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKA- 723

Query: 662 TKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRL 721
                +  ++ V   P+ + GN  +K +E  D+E+  P L    S LSS DS  + + R+
Sbjct: 724 ---IESEPFSRV---PKVKAGNALYKASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRI 777

Query: 722 SKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPV 781
           S+ +   + ++      N+N         KS I   + SK  FSAS  S+R+   +TSP+
Sbjct: 778 SRVD---QYENRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPSTRVVPQSTSPL 834

Query: 782 SGKSSS-----------ARSSAVTIDDSKQMNDSLNQEIIKLRAQ--------------- 815
            GK+S+            R++ V +D+ K +NDSL+QE+ +L+AQ               
Sbjct: 835 LGKASALWSAIPAPYPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGI 894

Query: 816 ---------------VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKS 860
                          +EEL SKS+ LEAEL R +KQL   TA A  EAEK + A  VIKS
Sbjct: 895 RDGCGIKSEESAQLRLEELASKSQLLEAELGRKTKQLMDATAKAAVEAEKRRAAKHVIKS 954

Query: 861 LTVQ 864
           LT Q
Sbjct: 955 LTAQ 958


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/888 (56%), Positives = 625/888 (70%), Gaps = 39/888 (4%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+W SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY+DRSLDLICKDKDE
Sbjct: 52  LVWLSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYDDRSLDLICKDKDE 111

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGDIQGT-- 117
           AEVW+ GLKALI+R    K +  + +   SS+  SPRA  +++SP  + F  GD      
Sbjct: 112 AEVWITGLKALISRNHMRKGRGESRSDGISSEATSPRAHTQRSSPLSSAFGSGDSSQKDE 171

Query: 118 ------QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDR- 170
                 + P  +    GL K  +D+  Y  A       +S   S   +++A  D  N R 
Sbjct: 172 IDPLRLRTPYGSPPKAGLEKVLSDMELYAVAPKVLCPPESACGSVHSVSSAGSDAINGRL 231

Query: 171 -SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
                + FR+SLSS VSSSS GS H+D D+LGDV+IWGEG A G LGGG + VG S  R 
Sbjct: 232 KGMTVDAFRVSLSSAVSSSSQGSGHDDSDALGDVYIWGEGTAGGILGGGMNGVGGSGVR- 290

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD+ +PKA+ES + LDV  IACG RHA LVTKQGE+FSWGEE GGRLGHG ++DV HP+L
Sbjct: 291 TDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKL 350

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           ++ L   NVELVACGEYH+CAVT SGDLYTWG  ++N GLLG+ ++ S W+P+K++G L+
Sbjct: 351 VDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLE 410

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GIH++ +SCG WHTAVVTS+G LFTFGDG+FG LGHGD  S S PREVE+L+GLRT R +
Sbjct: 411 GIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAA 470

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV     SSSS   + S GKLFTWGDGDKGRLGHGDKE RL P CVA L++ 
Sbjct: 471 CGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 528

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           N CQVACGH ++VALTT+GHVYTMGS  YGQLG P ADG +P RV+G+++++FVEE+ CG
Sbjct: 529 NFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCG 588

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           AYHVA LTS ++VYTWGKGANG+LGHGD D+R+SPT+V+ LKDKQVK VVCG +FTA IC
Sbjct: 589 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAIC 648

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS +D S+CS C  PF F+RKRHNCYNCGLVFC +CS++KSLKA++AP+ NKPYRV
Sbjct: 649 LHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYRV 708

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD CF        KL+R +   S   S  +R G++N +  E  + E    R + QL   +
Sbjct: 709 CDQCF-------GKLRRATEIDSSYHSALSRRGSINQRLIEAENSEYPNTRSRIQLGRNN 761

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHV-YPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
           S + +K  ES   K+N KL L  + V    N + Q     + KS      SSKK FSAS 
Sbjct: 762 SIEMSKDVESESLKRNKKLSLNGSQVSLSANDSSQRNAFNTSKS----FGSSKKFFSASL 817

Query: 769 SSSRMSSLATSPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQV 816
             SR+ S ATSP S +SS  R++             + +DD+K++ND L++E++KLR+QV
Sbjct: 818 PGSRIMSRATSPTSRRSSPPRATTPTPILSVRALPRIVVDDTKKLNDGLSEEVVKLRSQV 877

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           EELT K++  + ELERT+KQLK   A+A++E  KCK A EVIKSLT Q
Sbjct: 878 EELTRKAQLQDVELERTTKQLKEAIAVADEETAKCKAAKEVIKSLTAQ 925


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/900 (57%), Positives = 631/900 (70%), Gaps = 48/900 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+QVSRI+PGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  VLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+     KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFAGLKTLISHSHQRKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             D    + P  +   N L KAF+D++ Y         +DS + S   +++   DN+N  
Sbjct: 176 GSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGH 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S SS +SSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S S 
Sbjct: 236 PRGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV+ P+
Sbjct: 296 KMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ VS W+P++V G L
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ R  P CVA L++
Sbjct: 476 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVE 533

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGSA YGQLG P ADGL+P RV+G++ ++FVEE++C
Sbjct: 534 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D++N+PTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS  D S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYR
Sbjct: 654 CIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYR 713

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL         T G  +   S   R G V    +E  + E +  R   QLS L
Sbjct: 714 VCDSCYSKL---------TKGLETDTNSSTKR-GTVVQGFSETNEEELE-TRSNTQLSRL 762

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKK 762
           SS +S K  +SR SK+N K E     V PV         L + R ++P   +F   SSKK
Sbjct: 763 SSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNP---VF--GSSKK 817

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSPVS ++S  R            S  V  +D+K  NDSL+ E++
Sbjct: 818 FFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVL 877

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQGLNSKV 870
            LR+QVE LT KS  LE ELERT+KQLK    IA +E  KCK A EVIKSLT QG+  ++
Sbjct: 878 NLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQGMAERL 937


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/892 (56%), Positives = 634/892 (71%), Gaps = 43/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY++RSLDLICKDKD
Sbjct: 57  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKD 116

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD---IQ 115
           EAEVW  GLKALI+R    KW+  + +  T S+  SPR   R++SP  +PF   +    +
Sbjct: 117 EAEVWFSGLKALISRCHQRKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKE 176

Query: 116 GT-----QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD--NSN 168
           G+       P ++   NG+ KAF+D+  Y           S + S   L++   D  + +
Sbjct: 177 GSNHLRLHSPYESPPKNGVDKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGH 236

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            +    + FR+SLSS +SSSSHGS H+D D+LGDVF+WGEGI  G LGGG HRVG S   
Sbjct: 237 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEI 296

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV NIACG +HAVLVTKQGE FSWGEES GRLGHG +++V HP+
Sbjct: 297 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 356

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+  N+ELVACGEYH+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  +
Sbjct: 357 LIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDF--GILGHGNEVSHWVPKRVNFLM 414

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 415 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 474

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDK RLGHGDKEP+L P CVA L++
Sbjct: 475 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE 532

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG P ADG VPTRVDG++ +SFVEE+AC
Sbjct: 533 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIAC 592

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKW S +D S+CS C  PF F+RKRHNCYNCGLVFC +CS++KSLKA +AP+ NKPYR
Sbjct: 653 CLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYR 712

Query: 649 VCDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQL 705
           VCD CF KLKK   TD      S ++S+     +R  +VN  +  +   E    R   QL
Sbjct: 713 VCDRCFNKLKKAMETD-----PSSHSSL-----SRRESVNQGSDAIDRDEKLDTRSDGQL 762

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  S  +  +Q +SR SK+N K E   + V P+ +     G +   KS      SSKK F
Sbjct: 763 ARFSLLEPMRQVDSR-SKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFF 821

Query: 765 SASASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR++S ATSP+S +             S   +  + +DD+K+ ND+L+QE++ L
Sbjct: 822 SASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNLSQEVVML 881

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           R+QVE LT K++  E ELERT+KQLK   AIA +E+ +CK A EVIKSLT Q
Sbjct: 882 RSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQ 933


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/892 (56%), Positives = 634/892 (71%), Gaps = 43/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY++RSLDLICKDKD
Sbjct: 91  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKD 150

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD---IQ 115
           EAEVW  GLKALI+R    KW+  + +  T S+  SPR   R++SP  +PF   +    +
Sbjct: 151 EAEVWFSGLKALISRCHQRKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKE 210

Query: 116 GT-----QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD--NSN 168
           G+       P ++   NG+ KAF+D+  Y           S + S   L++   D  + +
Sbjct: 211 GSNHLRLHSPYESPPKNGVDKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGH 270

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            +    + FR+SLSS +SSSSHGS H+D D+LGDVF+WGEGI  G LGGG HRVG S   
Sbjct: 271 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEI 330

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV NIACG +HAVLVTKQGE FSWGEES GRLGHG +++V HP+
Sbjct: 331 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 390

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+  N+ELVACGEYH+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  +
Sbjct: 391 LIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDF--GILGHGNEVSHWVPKRVNFLM 448

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 449 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 508

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDK RLGHGDKEP+L P CVA L++
Sbjct: 509 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE 566

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG P ADG VPTRVDG++ +SFVEE+AC
Sbjct: 567 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIAC 626

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 627 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKW S +D S+CS C  PF F+RKRHNCYNCGLVFC +CS++KSLKA +AP+ NKPYR
Sbjct: 687 CLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYR 746

Query: 649 VCDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQL 705
           VCD CF KLKK   TD      S ++S+     +R  +VN  +  +   E    R   QL
Sbjct: 747 VCDRCFNKLKKAMETD-----PSSHSSL-----SRRESVNQGSDAIDRDEKLDTRSDGQL 796

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  S  +  +Q +SR SK+N K E   + V P+ +     G +   KS      SSKK F
Sbjct: 797 ARFSLLEPMRQVDSR-SKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFF 855

Query: 765 SASASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR++S ATSP+S +             S   +  + +DD+K+ ND+L+QE++ L
Sbjct: 856 SASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNLSQEVVML 915

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           R+QVE LT K++  E ELERT+KQLK   AIA +E+ +CK A EVIKSLT Q
Sbjct: 916 RSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQ 967


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/891 (57%), Positives = 631/891 (70%), Gaps = 46/891 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+L+ VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  ILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGD---IQ 115
           EAEVW  GLK LI+R    KW+  + +   S+ + SPR   R++SP  +PF   D     
Sbjct: 116 EAEVWFAGLKTLISRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 116 GTQ-----VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
           G++      P  +    GL KAF+DI+SY         +DS   S   +++   DN+N  
Sbjct: 176 GSENYRLRSPYGSPPKAGLDKAFSDIVSYAAPPRPFFPSDSNVGSVHSVSSGHSDNTNGN 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  R+G S   
Sbjct: 236 SRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRLGSSSGA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E    LDV NI+CG RHA LVTKQGE++SWGEESGGRLGHG + DV  P+
Sbjct: 296 KMDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT+N GL GHG++VS W+P++++G L
Sbjct: 356 LIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTAVVTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDKE RL P CVA L++
Sbjct: 476 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVE 533

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH  +VALTTSGHVYTMGS+ YGQLG P ADG+VP RV+G++ ++FVEE++C
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+RNSPTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYR
Sbjct: 654 CIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYR 713

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C+ KL K     + +S     +    N + N + +T           R   QLS L
Sbjct: 714 VCDSCYGKLNKGPETDRYSSAKRGAILQGFNDSINDDLET-----------RSNVQLSRL 762

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKFS 765
           SS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK FS
Sbjct: 763 SSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFFS 816

Query: 766 ASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLR 813
           AS   SR++S ATSPVS ++S  R            S  V +D ++ + D+L+QE++ LR
Sbjct: 817 ASVPGSRIASRATSPVSRRTSPPRSTTPTPTLGGLTSPRVVVDGARPIKDNLSQEVVHLR 876

Query: 814 AQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +QVE LT KS  LE ELERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 877 SQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 927


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  914 bits (2363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/894 (57%), Positives = 627/894 (70%), Gaps = 48/894 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+QVSRI+PGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  VLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+     KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFAGLKTLISHSHQRKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             D    + P  +   N L KAF+D++ Y         +DS + S   +++   DN+N  
Sbjct: 176 GSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGH 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S SS +SSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S S 
Sbjct: 236 PRGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV+ P+
Sbjct: 296 KMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ VS W+P++V G L
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ R  P CVA L++
Sbjct: 476 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVE 533

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGSA YGQLG P ADGL+P RV+G++ ++FVEE++C
Sbjct: 534 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D++N+PTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS  D S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYR
Sbjct: 654 CIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYR 713

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL         T G  +   S   R G V    +E  + E +  R   QLS L
Sbjct: 714 VCDSCYSKL---------TKGLETDTNSSTKR-GTVVQGFSETNEEELE-TRSNTQLSRL 762

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKK 762
           SS +S K  +SR SK+N K E     V PV         L + R ++P   +F   SSKK
Sbjct: 763 SSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNP---VF--GSSKK 817

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSPVS ++S  R            S  V  +D+K  NDSL+ E++
Sbjct: 818 FFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVL 877

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LR+QVE LT KS  LE ELERT+KQLK    IA +E  KCK A EVIKSLT Q
Sbjct: 878 NLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQ 931


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/894 (57%), Positives = 627/894 (70%), Gaps = 48/894 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+QVSRI+PGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  VLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+     KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFAGLKTLISHSHQRKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             D    + P  +   N L KAF+D++ Y         +DS + S   +++   DN+N  
Sbjct: 176 GSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGH 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S SS +SSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S S 
Sbjct: 236 PRGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV+ P+
Sbjct: 296 KMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ VS W+P++V G L
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ R  P CVA L++
Sbjct: 476 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVE 533

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGSA YGQLG P ADGL+P RV+G++ ++FVEE++C
Sbjct: 534 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D++N+PTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS  D S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYR
Sbjct: 654 CIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYR 713

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL         T G  +   S   R G V    +E  + E +  R   QLS L
Sbjct: 714 VCDSCYSKL---------TKGLETDTNSSTKR-GTVVQGFSETNEEELE-TRSNTQLSRL 762

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKK 762
           SS +S K  +SR SK+N K E     V PV         L + R ++P   +F   SSKK
Sbjct: 763 SSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNP---VF--GSSKK 817

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSPVS ++S  R            S  V  +D+K  NDSL+ E++
Sbjct: 818 FFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVL 877

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LR+QVE LT KS  LE ELERT+KQLK    IA +E  KCK A EVIKSLT Q
Sbjct: 878 NLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQ 931


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/894 (57%), Positives = 626/894 (70%), Gaps = 48/894 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+QVSRI+PGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 56  VLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+     KW+  + +   S+ + SPR   R++SP  +PF        D
Sbjct: 116 EAEVWFAGLKTLISHSHQRKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKD 175

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             D    + P  +   N L KAF+D++ Y         +DS + S   +++   DN+N  
Sbjct: 176 GSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGH 235

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S SS +SSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S S 
Sbjct: 236 PRGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSA 295

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV+ P+
Sbjct: 296 KMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPK 355

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ VS W+P++V G L
Sbjct: 356 LIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRA 475

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ R  P CVA L++
Sbjct: 476 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVE 533

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGSA YGQLG P ADGL+P RV+G++ ++FVEE++C
Sbjct: 534 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISC 593

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG  D++N+PTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS  D S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYR
Sbjct: 654 CIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYR 713

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL         T G  +   S   R G V    +E  + E +  R   QL  L
Sbjct: 714 VCDSCYSKL---------TKGLETDTNSSTKR-GTVVQGFSETNEEELE-TRSNTQLLRL 762

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKK 762
           SS +S K  +SR SK+N K E     V PV         L + R ++P   +F   SSKK
Sbjct: 763 SSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNP---VF--GSSKK 817

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSPVS ++S  R            S  V  +D+K  NDSL+ E++
Sbjct: 818 FFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVL 877

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LR+QVE LT KS  LE ELERT+KQLK    IA +E  KCK A EVIKSLT Q
Sbjct: 878 NLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQ 931


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/892 (56%), Positives = 633/892 (70%), Gaps = 43/892 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY++RSLD+ICKDKD
Sbjct: 52  VLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDVICKDKD 111

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD---IQ 115
           EAEVW  GLKALI+R    KW+  + +  T S+  SPR   R++SP  +PF   +    +
Sbjct: 112 EAEVWFSGLKALISRCHQRKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKE 171

Query: 116 GT-----QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPD--NSN 168
           G+       P ++   NG+ KAF+D+  Y          DS + S   L++   D  + +
Sbjct: 172 GSNHLRLHSPYESPPKNGIDKAFSDMSLYAVPPKGFFPPDSATMSVHSLSSGGLDTLHGH 231

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            +    + FR+SLSS +SSSSHGS H+D D+LGDVF+WGEGI  G LGGG +RVG S   
Sbjct: 232 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNYRVGSSLEI 291

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV  IACG +HAVLVTKQGE FSWGEES GRLGHG +++V HP+
Sbjct: 292 KMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 351

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ LS  N+ELVACGEYH+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  +
Sbjct: 352 LIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDF--GILGHGNEVSHWVPKRVNFLM 409

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 410 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 469

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDK RLGHGDKEP+L P CVA L++
Sbjct: 470 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVE 527

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG P ADG VPTRV+G++ +SFVEE+AC
Sbjct: 528 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIAC 587

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 588 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           CLHKW S +D S+CS C  PF F+RKRHNCYNCGLVFC +C+++KSLKA +AP+ NKPYR
Sbjct: 648 CLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCTNKKSLKACMAPNPNKPYR 707

Query: 649 VCDDCFTKLKK---TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQL 705
           VCD CF KLKK   TD      S ++S+     +R  +VN  +  +   E    R   QL
Sbjct: 708 VCDRCFNKLKKAMETD-----PSSHSSL-----SRRESVNQGSDAIDRDEKLDTRSDGQL 757

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKF 764
           +  S  +  +Q +SR SK+N K E   + V P+ +     G +   KS      SSKK F
Sbjct: 758 ARFSLLEPMRQVDSR-SKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFF 816

Query: 765 SASASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKL 812
           SAS   SR+ S ATSP+S +             S   +  + +DD+K+ ND+L+QE++ L
Sbjct: 817 SASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLTTQKIVVDDTKRTNDNLSQEVVML 876

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           R+QVE LT K++  E ELERT++QLK   AIA +E+ +CK A EVIKSLT Q
Sbjct: 877 RSQVENLTRKAQLQEVELERTTEQLKEALAIASEESARCKAAKEVIKSLTAQ 928


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  908 bits (2347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/894 (56%), Positives = 630/894 (70%), Gaps = 48/894 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ L+L+ VSRI+PGQRTA FQRYPRPEKE QSFSLI  DRSLD+ICKDKD
Sbjct: 58  VLIWFSGKEEKHLRLSHVSRIMPGQRTAIFQRYPRPEKECQSFSLISQDRSLDIICKDKD 117

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF--------D 110
           EAEVW  GLK LI+R    KW+  + +   S+++ SPR   R++SP  +PF        D
Sbjct: 118 EAEVWFAGLKTLISRSHQRKWRTESRSDTISSAATSPRIYTRRSSPLSSPFSSNDSLHKD 177

Query: 111 FGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
             +    + P  +   NGL KAF+D++ Y     +   +DS + S   +++   DN+N  
Sbjct: 178 GNENYRFRSPYGSPQKNGLDKAFSDVVLYAVPPKSFFPSDSNARSVHSMSSGHSDNTNGH 237

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR S SS VSSSS+GS ++D D+LGDV IWGEG   G LGGG  R+G S   
Sbjct: 238 PRGIQMDPFRASYSSAVSSSSYGSGYDDGDALGDVLIWGEGTGEGILGGGSSRIGSSSGA 297

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L+PK +E  + LDV NI+CG +HA LV+KQGEI+SWGEESGGRLGHG + DV+HP+
Sbjct: 298 KMDCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPK 357

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ +S W+P+K+ G L
Sbjct: 358 LIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG +HT +VTSAG LFTFGDGSFG LGHGD  S S+P+EVE+L+GLRT R 
Sbjct: 418 EGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRA 477

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     + +S S + S GK+FTWGDGDKGRLGHGDKE RL P CVA L++
Sbjct: 478 ACGVWHTAAVVEVM--AGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVE 535

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGSA YGQLG P ADG++P RV+G++ ++FVEE++C
Sbjct: 536 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARVEGKLHKNFVEEISC 595

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHG+ D++N+PTLV+ LKDKQV+ VVCG NFTA I
Sbjct: 596 GAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAI 655

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKW+S VD S+CS C  PF  RRKRHNCYNC L+FC +CSS+KSLKA+LAP+ +KPYR
Sbjct: 656 CIHKWISGVDQSMCSGCRQPFNLRRKRHNCYNCALIFCHSCSSKKSLKASLAPNPSKPYR 715

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL    TK   T  Y+S       + G V    ++  D + +  R   QLS +
Sbjct: 716 VCDSCYSKL----TKGLETDMYSSA------KRGAVVQGFSDTVDEDTE-TRSNAQLSRM 764

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKK 762
           SS DS K  +SR SK+N K E     V PV         L + R ++P   +F   SSKK
Sbjct: 765 SSIDSFKHMDSRYSKKNKKFEFNSTRVSPVPNGGSHWSGLNISRSFNP---VF--GSSKK 819

Query: 763 KFSASASSSRMSSLATSPVSGKSSSAR------------SSAVTIDDSKQMNDSLNQEII 810
            FSAS   SR+ S ATSPVS + S  R            S  V ++ +K  NDS  QEI+
Sbjct: 820 FFSASVPGSRIISRATSPVSRRPSPTRSTTPTPTFGGLTSPRVVVNGAKPTNDSQTQEIL 879

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LR+QV+ LT K + LEAELERT+KQLK   AIA +E  KCK A EVIK+LT Q
Sbjct: 880 NLRSQVDNLTRKYQLLEAELERTTKQLKEAIAIAGEETAKCKAAKEVIKTLTAQ 933


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/933 (54%), Positives = 626/933 (67%), Gaps = 87/933 (9%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRT--------------------------------- 27
           +LIW+SGKEE+ L+L+ +S+IIPGQRT                                 
Sbjct: 55  VLIWFSGKEEKHLRLSHISKIIPGQRTLNSIVNEQKLYVSLEVFPFSIRDEIGCLTLLTR 114

Query: 28  ------ATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWLVGLKALITRGTHSKW 81
                 + FQRYPRPEKE QSFSLI +DRSLD+ICKDKDEAEVW  GLK LI+R    KW
Sbjct: 115 PFFIIQSIFQRYPRPEKECQSFSLISHDRSLDVICKDKDEAEVWFAGLKTLISRCHQRKW 174

Query: 82  KLGTIN--CSTSSDSPRARIRKTSPTVTPF--------DFGDIQGTQVPLDNVSNNGLGK 131
           +  + +   S+ + SPR   R++SP  +PF        D  D    + P  +   NGL K
Sbjct: 175 RTESRSDLLSSGATSPRTYTRRSSPLSSPFSSNDSIHKDGSDNYRLRTPYGSPPKNGLEK 234

Query: 132 AFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN--DRSSAAETFRISLSSVVSSSS 189
           AF+D++ Y         +DS + S   +++   DN+N   R    + FR S SS VSSSS
Sbjct: 235 AFSDVMLYAVPPRGFFPSDSNAGSVHSMSSGHSDNTNGHPRGVPMDAFRASYSSAVSSSS 294

Query: 190 HGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           HGS H+D D+LGDVFIWGEG   G LGGG  RVG S   + D L+PK +E  + LDV NI
Sbjct: 295 HGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNI 354

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           +CG RHA LVTKQGEI+SWGEESGGRLGHG + DVS P+LI+ LS +N+ELVACGEYHTC
Sbjct: 355 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTC 414

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AVT SGDLYTWGDGT+  GLLGHG+ +S W+P+ V+G L+GIH+S ISCG WHTAVVTSA
Sbjct: 415 AVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTAVVTSA 474

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R +CGVWHTAAVV     + +S 
Sbjct: 475 GQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM--AGNSS 532

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           S + S GK+FTWGDGDKGRLGHGDK P+L P CVA L++ N CQVACGH L+VALTTSGH
Sbjct: 533 SSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGH 592

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           VYTMGSA YGQLG   ADG++P RV+G++ ++FVEE++CGAYHVA LTS ++VYTWGKGA
Sbjct: 593 VYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGA 652

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPF 609
           NG+LGHGD D++N+PTLV+ LKDKQV+ VVCG+NFTA IC+HKWVS VD S+CS C  PF
Sbjct: 653 NGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWVSGVDQSMCSGCRQPF 712

Query: 610 GFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSG 669
             RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPYRVCD C++KL         T G
Sbjct: 713 NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVCDTCYSKL---------TKG 763

Query: 670 YTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLE 729
             + + S   R   V       A+ E    R   QLS LSS +S K  +SR SK+N K E
Sbjct: 764 LETDMHSSAKRAATV--PGVSDANEEDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFE 821

Query: 730 LQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSG 783
                V PV         L + R ++P     +  SSKK FSAS   SR+ S ATSP+S 
Sbjct: 822 FNSTRVSPVPNGSSHWSGLNISRSFNP-----VFGSSKKFFSASVPGSRIVSRATSPISR 876

Query: 784 KSSSAR------------SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELE 831
           ++S  R            S  V  +D K  ND+L+QE++ LR+QVE L  KS+ LE ELE
Sbjct: 877 RASPPRSTTPTPTLGGLTSPRVVPNDGKPTNDALSQEVLNLRSQVESLARKSQLLEVELE 936

Query: 832 RTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 937 RTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 969


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/889 (56%), Positives = 629/889 (70%), Gaps = 40/889 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SG EE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY++RSLD+ICKDKD
Sbjct: 56  VLIWFSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQG- 116
           EAEVW  GLKALI+       +  + +  T S+  SPR   R++SP  +PF   D +Q  
Sbjct: 116 EAEVWFTGLKALISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKD 175

Query: 117 ------TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
                    P ++   NGL KAF+D+  Y         +DS + S   + +   D+ +  
Sbjct: 176 GSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGH 232

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S+SS VSSSSHGS H+D D+LGDVFIWGEGI  G LGGG  RVG SF  
Sbjct: 233 MRGMGIDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDM 292

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV NIACG +HAVLVTKQGE FSWGEES GRLGHG ++++  P+
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 352

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+  N+ELVACGE+H+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  L
Sbjct: 353 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF--GVLGHGNEVSHWVPKRVNFLL 410

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 470

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDKGRLGHG+KEP+L P CVA L++
Sbjct: 471 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVE 528

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG   ADG +P RV+G++ +SFVEE+AC
Sbjct: 529 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIAC 588

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 589 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+H+W S +D S+CS C  PF F+RKRHNCYNCGLVFC +C+S+KSLKA +AP+ NKPYR
Sbjct: 649 CIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYR 708

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD CF KLKKT       S ++S+     +R G++N  +  +   +    R   QL+  
Sbjct: 709 VCDKCFNKLKKTME--TDPSSHSSL-----SRRGSINQGSDPIDKDDKFDSRSDGQLARF 761

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSAS 767
           S  +S +Q +SR  K+N K E   + V P+ + + Q G +   KS   +  +SKK FSAS
Sbjct: 762 SLMESMRQVDSRY-KKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSAS 820

Query: 768 ASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
              SR+ S ATSP+S +             S   +    +DD+K+ ND+L+QE++KLR+Q
Sbjct: 821 VPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQ 880

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT K++  E ELERT+KQLK   AIA +E  +CK A EVIKSLT Q
Sbjct: 881 VESLTRKAQLQEVELERTAKQLKEALAIANEETTRCKAAKEVIKSLTAQ 929


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/889 (55%), Positives = 627/889 (70%), Gaps = 40/889 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SG EE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIY++RSLD+ICKDKD
Sbjct: 56  VLIWFSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKD 115

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQG- 116
           EAEVW  GLKALI+       +  + +  T S+  SPR   R++SP  +PF   D +Q  
Sbjct: 116 EAEVWFTGLKALISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKD 175

Query: 117 ------TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
                    P ++   NGL KAF+D+  Y         +DS + S   + +   D+ +  
Sbjct: 176 GSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGH 232

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S+SS VSSSSHGS H+D D+LGDVFIWGEGI  G LGGG  RVG SF  
Sbjct: 233 MRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDI 292

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV NIACG +HAVLVTKQGE FSWGEES GRLGHG ++++  P+
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 352

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+  N+ELVACGE+H+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  L
Sbjct: 353 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF--GVLGHGNEVSHWVPKRVNFLL 410

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 470

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDKGRLGHG+KEP+L P CVA L++
Sbjct: 471 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVE 528

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG   ADG  P RV+G++ +SFVEE+AC
Sbjct: 529 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIAC 588

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 589 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+H+W S +D S+CS C  PF F+RKRHNCYNCGLVFC +C+S+KSLKA +AP+ NKPYR
Sbjct: 649 CIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYR 708

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD CF KLKKT       S ++S+     +R G++N  +  +   +    R   QL+  
Sbjct: 709 VCDKCFNKLKKTME--TDPSSHSSL-----SRRGSINQGSDPIDKDDKFDSRSDGQLARF 761

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSAS 767
           S  +S +Q +SR  K+N K E   + V P+ + + Q G +   KS   +  +SKK FSAS
Sbjct: 762 SLMESMRQVDSR-HKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSAS 820

Query: 768 ASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
              SR+ S ATSP+S +             S   +    +DD+K+ ND+L+QE++KLR+Q
Sbjct: 821 VPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQ 880

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT K++  E ELERT+KQLK   AI  +E  +CK A EVIKSLT Q
Sbjct: 881 VESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSLTAQ 929


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/884 (53%), Positives = 612/884 (69%), Gaps = 41/884 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
            LIWY+GK E+QLKL+ VS+I+PGQ TA FQRYP+PEKEYQSFSLIY++RSLD+ICKDK 
Sbjct: 50  FLIWYAGKLEKQLKLSHVSKIMPGQHTAIFQRYPQPEKEYQSFSLIYSNRSLDVICKDKV 109

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRK--------TSPTVTPFDFG 112
           EAEVW+V L+ALI++ +  K ++G  +  + ++SPR+  RK        TS  +   D  
Sbjct: 110 EAEVWIVALRALISQNSCCK-RIG--DPQSDANSPRSHARKSSLSNVSCTSSDIIYKDPE 166

Query: 113 DIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSS 172
           D     VP +    N LGKAF++++S+T AA   ++A+SV+ S S L++   D++N  SS
Sbjct: 167 DTHPILVPYETSPQNRLGKAFSEVLSFTAAAKAYTQAESVARSLSNLSSGISDDANSHSS 226

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A + FR S SS VSSS + S+HED D  GDV   GEGI+N  LGG  + V  S   + DA
Sbjct: 227 AVDAFRNSSSSAVSSSGYVSSHEDVDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDA 286

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLPKA++   ALD   IACG++HAV+VTKQG+IFSWGE SGG+LGHG +ADVS P++I+ 
Sbjct: 287 LLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDA 346

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           LS  NV LVACGE+HTCAVT SG+LYTWGD T+N+G LGHGS VS WIPR+V G ++ + 
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVR 406

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +S++SCG WHTA V+S G LFTFGDG+FGALGHGD  STS PREVE+L+GLRT +VSCG+
Sbjct: 407 ISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGI 466

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAAV+   + S    +  +  GKLFTWG G++G+LGHGD+EPRL P CV+  +   +C
Sbjct: 467 WHTAAVIDFINESDRLDTSLS--GKLFTWGAGERGQLGHGDEEPRLVPSCVS--MPAGVC 522

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           QVAC H +++ALT  G VYTMG+A YGQLG P + G +P   DG+I    ++++ACG++H
Sbjct: 523 QVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHH 582

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V AL+S   VYTWGKG NGQLGHGD  +R++PTLV  LK KQVK VVCG NFTA+IC HK
Sbjct: 583 VVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVICPHK 642

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
            VSS D S+CS CHNPF FRRKRHNCYNCGL+FCKACSS++SLKAALAP++NKP RVCD+
Sbjct: 643 CVSSADQSICSGCHNPFNFRRKRHNCYNCGLLFCKACSSKRSLKAALAPNVNKPSRVCDE 702

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
           CF KL        +       +Q P++  G++++   E+A+ E+       Q   LSS D
Sbjct: 703 CFAKLTTAMEDGPK-------LQVPKSCRGSLHYNCKEIAEAESITSNPSHQHCRLSSLD 755

Query: 713 SNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
           S KQ   + S+ N K E    HV P     Q+G +   +  +        + SAS   S 
Sbjct: 756 SFKQALRQNSQHNKKAESCQCHVSPT----QIGSL---EWELTYEYEDLGEMSASDPGSG 808

Query: 773 MSSLATSPVSGKSS---SARSSA---------VTIDDSKQMNDSLNQEIIKLRAQVEELT 820
           M S ATSPVS +SS   S RS++         +  D+SKQ N+SL+QEI+ LR QV +LT
Sbjct: 809 MLSRATSPVSRRSSQEHSLRSASSFNNFAHAELLPDNSKQRNESLSQEILLLRGQVPDLT 868

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            +S  LEA+++RTS+QLK  T   + E+EK K A E+I+SLT Q
Sbjct: 869 HRSRVLEADIDRTSRQLKEATETVKKESEKNKVAKEIIRSLTAQ 912


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/889 (55%), Positives = 622/889 (69%), Gaps = 47/889 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SG EE+ LKL+ VSRII GQRT    RYPRPEKEYQSFSLIY++RSLD+   DKD
Sbjct: 50  VLIWFSGNEEKHLKLSHVSRIISGQRT----RYPRPEKEYQSFSLIYSERSLDV---DKD 102

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGD-IQG- 116
           EAEVW  GLKALI+       +  + +  T S+  SPR   R++SP  +PF   D +Q  
Sbjct: 103 EAEVWFTGLKALISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKD 162

Query: 117 ------TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND- 169
                    P ++   NGL KAF+D+  Y         +DS + S   + +   D+ +  
Sbjct: 163 GSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGH 219

Query: 170 -RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+S+SS VSSSSHGS H+D D+LGDVFIWGEGI  G LGGG  RVG SF  
Sbjct: 220 MRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDI 279

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D+LLPKA+EST+ LDV NIACG +HAVLVTKQGE FSWGEES GRLGHG ++++  P+
Sbjct: 280 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 339

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+  N+ELVACGE+H+CAVT SGDLYTWG G +  G+LGHG++VS W+P++V+  L
Sbjct: 340 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF--GVLGHGNEVSHWVPKRVNFLL 397

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGHGD  S  IPREV++L+GLRT R 
Sbjct: 398 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 457

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     SSSS   + S GKLFTWGDGDKGRLGHG+KEP+L P CVA L++
Sbjct: 458 ACGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVE 515

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQVACGH L+VALTTSGHVYTMGS  YGQLG   ADG  P RV+G++ +SFVEE+AC
Sbjct: 516 PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIAC 575

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKG+NG+LGHGD D+RNSPTLV+ LKDKQVK + CG NFTA +
Sbjct: 576 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 635

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+H+W S +D S+CS C  PF F+RKRHNCYNCGLVFC +C+S+KSLKA +AP+ NKPYR
Sbjct: 636 CIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYR 695

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD CF KLKK  T     S ++S+     +R G++N  +  +   +    R   QL+  
Sbjct: 696 VCDKCFNKLKK--TMETDPSSHSSL-----SRRGSINQGSDPIDKDDKFDSRSDGQLARF 748

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSAS 767
           S  +S +Q +SR  K+N K E   + V P+ + + Q G +   KS   +  +SKK FSAS
Sbjct: 749 SLMESMRQVDSR-HKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSAS 807

Query: 768 ASSSRMSSLATSPVSGKS------------SSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
              SR+ S ATSP+S +             S   +    +DD+K+ ND+L+QE++KLR+Q
Sbjct: 808 VPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQ 867

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           VE LT K++  E ELERT+KQLK   AI  +E  +CK A EVIKSLT Q
Sbjct: 868 VESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSLTAQ 916


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  866 bits (2238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/841 (57%), Positives = 602/841 (71%), Gaps = 44/841 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+QL+L+ VSRIIPGQRTA FQRYPRPEKE QSFSLI +DRSLD+ICKDKD
Sbjct: 55  ILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKD 114

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPFDFGD----- 113
           EAEVW  GLK LITR    KW+  + +   S+ + SPR   R++SP  +PF   D     
Sbjct: 115 EAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKD 174

Query: 114 -IQGTQV--PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN-- 168
            ++  ++  P  +    GL KAF+DI+SY         +DS + S   +++   DN+N  
Sbjct: 175 GVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLH 234

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            R    + FR+SLSS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S   
Sbjct: 235 SRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGV 294

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
             D L+PK +E  + LDV NI+CG RHA LVTKQGEI+SWGEESGGRLGHG + DV  P+
Sbjct: 295 NMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPK 354

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           LI+ L+ +N+ELVACGEYHTCAVT SGDLYTWG+GT NSGLLGHG++VS W+P++V+G L
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R 
Sbjct: 415 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRA 474

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CGVWHTAAVV     +SS  S + S GK+FTWGDGDKGRLGHGDK+ RL P CVA L++
Sbjct: 475 ACGVWHTAAVVEVMVGNSS--SSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            N CQ+ACGH ++VALTTSGHVYTMGS  YGQLG P ADG++P RV+G++ ++FVEE++C
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISC 592

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GAYHVA LTS ++VYTWGKGANG+LGHGD D+R+SPTLV+ LKDKQV+ VVCG+NFTA I
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
           C+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC ACSS+KSLKA+LAP+ NKPYR
Sbjct: 653 CIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYR 712

Query: 649 VCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSIL 708
           VCD C++KL K       T  Y+S       + G+V     +  D E +  +   QLS L
Sbjct: 713 VCDSCYSKLNKG----PETDRYSSA------KRGSVIQGFNDSVDEELE-TKSNAQLSRL 761

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK---SSKKKFS 765
           SS +S K  +SR SK+N K E   + V P+          S  S + ++K   SSKK FS
Sbjct: 762 SSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNG------SSHWSGLNISKSFGSSKKFFS 815

Query: 766 ASASSSRMSSLATSPVSGKSSSARS----------SAVTIDDSKQMNDSLNQEIIKLRAQ 815
           AS   SR+ S ATSPVS ++S  RS          ++  + D  + NDS++QE++ LR+Q
Sbjct: 816 ASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQ 875

Query: 816 V 816
           V
Sbjct: 876 V 876


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/888 (53%), Positives = 586/888 (65%), Gaps = 73/888 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           LIW SGKEE+ LKL+ VSRIIPGQRT                           ICKDK+E
Sbjct: 53  LIWISGKEEKHLKLSHVSRIIPGQRT---------------------------ICKDKEE 85

Query: 62  AEVWLVGLKALITRGTHSKWK----LGTINCSTSSDSPRARIRKTSPTVTPF-------- 109
           AEVW  GLKALI+   H  WK           + ++SPRA   ++SP    F        
Sbjct: 86  AEVWFTGLKALISH--HQLWKKREETRNDGLLSEANSPRAYTLRSSPLSFAFGSDDSSMK 143

Query: 110 DFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND 169
           D  D    + P D+    GL KA +D + YT         +S     S  T     N+N 
Sbjct: 144 DGTDPLRLRTPYDSPPKAGLEKALSDAV-YTVPPKVLFPLESACGPGSDETTGRMKNTN- 201

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
                E FR+SLSS VSSSS GS  +D D+LGDV+IWGEG   G LGGG H+ G S   Q
Sbjct: 202 ----TEAFRVSLSSAVSSSSQGSGRDDNDALGDVYIWGEGTGEGILGGGVHKSGGS-DIQ 256

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D+ +PKA+ES + LDV  IACG +HA LVTKQGE+FSWGEE GGRLGHG ++DVSHP+ 
Sbjct: 257 MDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKF 316

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           ++ L   NVELVACGEY +CAVT SGDLY WG   YN GLLG GS+ + W+PRK+SG L+
Sbjct: 317 VDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLE 376

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GIH+S +SCG WHTAVVTSAG LFTFGDG+FG LGHGD  S S PREVE+L+GLRT RV+
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVA 436

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV     SSSS   + S GKLFTWGDGDKGRLGHGDKE RL P  VA L++ 
Sbjct: 437 CGVWHTAAVVEVMVGSSSS--SNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEP 494

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           + CQVACGH L+VALTTSG VYTMGS  YGQLG P ADG VPTRV+G++ ++FVEE+ACG
Sbjct: 495 SFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACG 554

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           AYHVA LTS ++VYTWGKGANG+LGHGD D+RN P++V+ LKDKQVK ++CG +FTA IC
Sbjct: 555 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS +D S+CS C  PF F+RKRHNCYNCGLVFC +CSS+KSLKA++AP+ NKPYRV
Sbjct: 615 LHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 674

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSIL 708
           CD CF       +K++R++G  S V S   R G+ N    E+ ++ E    R   +L   
Sbjct: 675 CDYCF-------SKIRRSTGTDSSVHSTLRRRGSENQGLNEITEKSENSNTRSHAKLGRN 727

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
            S +S+K+ ES  S++N K       V P   ++     ++   S     SSKK FSAS 
Sbjct: 728 FSMESSKEVESISSRRNRKSSSISTQVSPSAYDVSQRNAFNNSKSF---GSSKKFFSASV 784

Query: 769 SSSRMSSLATSPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQV 816
             SR+ S ATSP S +SS  R++             V +D + ++NDSL +E++KLRAQV
Sbjct: 785 PGSRIVSRATSPTSRRSSPPRATTPTPALSVHELPKVAVDGTGRLNDSLREEVVKLRAQV 844

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           EELT K++  E ELERT+ QLK   A+AE+E  KCK A EVIKSLT Q
Sbjct: 845 EELTHKAQLQEVELERTTSQLKEAVAVAEEETAKCKAAKEVIKSLTAQ 892


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/913 (50%), Positives = 596/913 (65%), Gaps = 87/913 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY-NDRSLDLICKDKD 60
           LIWYSGKEE+ L+L+ ++RI+PGQRTA FQRYPR EKEYQSFSLIY NDRSLDLICKDKD
Sbjct: 50  LIWYSGKEEKSLRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGNDRSLDLICKDKD 109

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN-CSTSSDS-PRARIRKTSPTVTPFDFGDIQGTQ 118
           EAEVW VGLKAL++ G  S+ +  + + C   SDS   A   + SP  +PF  G++    
Sbjct: 110 EAEVWFVGLKALVSGGQLSRLRFDSRSECGPPSDSNSPATWSRISPASSPF--GNV---- 163

Query: 119 VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP-SPLTNA----FPDNSN----- 168
              DN+      +AF     Y   +         SFSP +P  ++    F +N++     
Sbjct: 164 ---DNLPRQDGREAFRFQSPY--GSPPRYALQQRSFSPGAPSLDSSSKLFLENASTAGSL 218

Query: 169 --DRSSAAET----------------------FRISLSSVVSSSSHGSAHEDFDSLGDVF 204
             D SS                          FR+S+SS VSSSS GS  E+ D+LGDVF
Sbjct: 219 HSDMSSEPAASVLHLRGGAAAATSAAIPLDANFRVSMSSAVSSSSQGSGQEEGDALGDVF 278

Query: 205 IWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGE 264
           +WGE + +G  G            +TD+LLPKA+ES + LDVH+IACG RHA LVTKQGE
Sbjct: 279 LWGESVGSGDGG-----------IKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGE 327

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +F WG+ESGGRLGHG + DV+HP+L+E L+  N E VACGEYH+CAVT SGDL+TWGDGT
Sbjct: 328 VFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGT 387

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
           ++ GLLGHG+ +S W P++V G L+GI +S ++CG+WHTA+VTSAG LFTFGDG+FG LG
Sbjct: 388 HSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLG 447

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HGD  S ++P+EVE+L+GL+T RV+CGVWHTAAVV      S++     S GKLFTWGDG
Sbjct: 448 HGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNA---GGSSGKLFTWGDG 504

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           DKGRLGHGDKE +L P CVA L+D N  QVACGH L+VALT +G V+TMGS+ YGQLG  
Sbjct: 505 DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDV 564

Query: 505 VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
            ADG +P  V+G + E+FVEE+ACGAYHVA LT+ ++VYTWGKGANG+LGHGD  +RN+P
Sbjct: 565 RADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTP 624

Query: 565 TLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLV 624
           TLV+ LK+KQVK V CG  FTA ICLHKWVS  D S+CS C  PFGF RKRHNCYNCG  
Sbjct: 625 TLVEALKEKQVKSVACGSGFTAAICLHKWVSGADQSLCSGCRQPFGFTRKRHNCYNCGHA 684

Query: 625 FCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNV 684
           FC +CS+RK+LKA+LAP+  KPYRVCD CF KLKK    L    G  + V          
Sbjct: 685 FCHSCSARKALKASLAPNPAKPYRVCDPCFVKLKKGGEVLLPGGGGGAGVP--------- 735

Query: 685 NHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQM 744
             + + +A +  QG  ++    +    +  +Q + +  + +L   LQ +        + +
Sbjct: 736 --RKSMVATQGQQG-SVKKPRKLELQPEQQQQQQQQQPQYHLNQALQFSSSVQPWGAVDI 792

Query: 745 GRIYSPKSSIFLAKSSKKKFSA-SASSSRMSSLATSPVSGKSSSARSSAVT--------- 794
             +++P +S     S +   SA S  +SR++S + SP+S + S  RS+  T         
Sbjct: 793 PSVFNPYASGGSGSSLRPLVSALSVPTSRVASRSVSPLSRRPSPPRSATPTPTLAGLATP 852

Query: 795 ---IDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKC 851
              +D+ K+ ND +N E++KL+ QVE+L  K    +AEL R+++Q++   AIA +E+ KC
Sbjct: 853 KTLVDELKRENDVVNHEVVKLKEQVEDLNRKLLQQDAELRRSAQQVQEALAIAGEESAKC 912

Query: 852 KTANEVIKSLTVQ 864
           + A EVIK LT Q
Sbjct: 913 QAAKEVIKQLTAQ 925


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/884 (49%), Positives = 572/884 (64%), Gaps = 61/884 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL  VSRIIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSSGERILKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EAEVW+ GLKALI+ G   +     W  G +    S D        +S + T     DI
Sbjct: 110 VEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYFDDSKDLTSNSPSDSSVSATR----DI 165

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN--DRSS 172
              +V +   SN               + N+    +SV   P   ++   D++N   + S
Sbjct: 166 SSPEVSVGFNSNT--------------SPNSYRPENSV---PPERSHVALDHTNMQTKGS 208

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
            ++ FR+S+SS  S+SSHGSA +D D+LGDV+IWGE I +  +  G  +     + + D 
Sbjct: 209 GSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVICDNLVKVGADKNANYLTTRADL 268

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLPK +ES + LDVH+IACG RHA LVT+QGEIF+WGEESGGRLGHG   DV  P+L+E 
Sbjct: 269 LLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVES 328

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+  +V+ VACGE+HTCAVT +G+L+TWGDGT+N+GLLGHG+ VS WIP+++SG L+G+ 
Sbjct: 329 LAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQ 388

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++ ++CG WHTA+VT+   LFTFGDG+FG LGHGD  + + PREVE+L GLRT  V+CGV
Sbjct: 389 VASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGV 448

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAAVV    + SS+   S S GKLFTWGDGDK RLGHGDKEPRL P CV  LI+ N  
Sbjct: 449 WHTAAVVEVIVTQSSA---SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQ 505

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +VACGH L+V LTTSG V TMGS  YGQLG P +DG +P  V+ ++    VEE+ACGAYH
Sbjct: 506 KVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYH 565

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           VA LTS ++VYTWGKGANG+LGHGD ++R +PTLV+ LKD+ VK + CG N+TA ICLHK
Sbjct: 566 VAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHK 625

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
           WVS  + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+AALAP+  KPYRVCD 
Sbjct: 626 WVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDS 685

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
           C+TKL K             +  +  NR   V   + E  DR  +      + ++ S+ D
Sbjct: 686 CYTKLNKV------------LEAAANNRRTTVPRLSGENKDRLDKAEIRLSKSAMPSNLD 733

Query: 713 SNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
             KQ +S+ +KQ  K +   + V P    L   +     S++ L ++  +      + S 
Sbjct: 734 LIKQLDSKAAKQGKKADTF-SLVRPSQAPLLQLKDVVLFSAVDLRRTVPRPI---LTPSG 789

Query: 773 MSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRAQVEELT 820
           +SS + SP S K S  RS+           + +I DS K+ N+ LNQE++KLR QVE L 
Sbjct: 790 VSSRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLR 849

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            + E  E EL++++K+++    +A +E+ K K A EVIKSLT Q
Sbjct: 850 ERCELQELELQKSAKKVQEAMVVATEESAKSKAAKEVIKSLTAQ 893


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/888 (49%), Positives = 574/888 (64%), Gaps = 71/888 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW +   ER LKL+ VSRIIPGQRTA FQRY RPEK+Y SFSLIY++  RSLDLIC+DK
Sbjct: 51  LIWITSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLICRDK 110

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EAEVW+ GLKALI  G   +     W  G +  + S D     +   +P+V+       
Sbjct: 111 VEAEVWIAGLKALIASGQGGRSKIDGWSDGGLILNDSRD-----LTSNNPSVS------- 158

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND--RSS 172
                    +++   G    DI       NT+ ++     + S  ++A PD +N   + S
Sbjct: 159 ---------LASTSRGICSPDI--SVTLPNTSPKSFRSDNTISERSHAPPDPTNMQVKGS 207

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A++ FR+S+SS  S+SSHGSA +D D+LGDV+IWGE        G +  V Y  S + D 
Sbjct: 208 ASDVFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVTCENVKVGADKNVNY-VSPRADV 266

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLP+ +ES++ LDVH+IACG RHA LVT+QGE+F+WGEESGG LGHG   +V  P+L+E 
Sbjct: 267 LLPRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEA 326

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+   V+ VACGE+H+CAVT +G+LYTWGDGT+N+GLLGHGS VS WIP++++G L+G+ 
Sbjct: 327 LTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQ 386

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++++CG WHTA+VTS G LFTFGDG+FG LGHGD  + S PREVE+L GLRT  V+CGV
Sbjct: 387 IAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGV 446

Query: 413 WHTAAVV--VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           WHTAAVV  +AT SS+S      S GKLFTWGDGDK RLGHGDKE RL P CVA LID N
Sbjct: 447 WHTAAVVEVIATHSSTS-----ISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSN 501

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
             ++ACGH L+  LT SG V+TMGS  YGQLG P +DG VP  V  +IA   +EE+ACGA
Sbjct: 502 FHKIACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGA 561

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           YHVA LTS ++VYTWGKGANG+LGHGD ++R +P LV+ LKD+ VK + CG N++A ICL
Sbjct: 562 YHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAICL 621

Query: 591 HKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVC 650
           HKWVS  + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+AA AP+  KPYRVC
Sbjct: 622 HKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVC 681

Query: 651 DDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSS 710
           D C+ KL K                S  NR   +   + E  DR  +      +  I S+
Sbjct: 682 DSCYAKLNKV------------AEASNSNRRNALPRLSGENKDRLDKSDLRLSKAVIHSN 729

Query: 711 FDSNKQTESRLSKQNLKLELQDNHVYPVNKN--LQMGRIYSPKSSIFLAKSSKKKFSASA 768
            D  KQ +S+ +KQ  K +   + V+P      LQ+  +    S++ L ++  +   A  
Sbjct: 730 MDLIKQLDSKAAKQGKKGDTF-SLVHPSQPPSLLQLKDVVL-SSALDLRRTVPRPVVA-- 785

Query: 769 SSSRMSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRAQV 816
             S +SS + SP S + S  RS+           + +I DS K+ N+ LNQE+ KL AQV
Sbjct: 786 -PSGVSSRSVSPFSRRPSPPRSATPIPTTSGLAFSKSISDSLKKTNELLNQEVQKLHAQV 844

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           E L  + E  E EL+R++K  +   A+A +E+ KCK A EVIKSLT Q
Sbjct: 845 ESLRQRCELQELELQRSAKNTQEAMALAAEESAKCKAAKEVIKSLTAQ 892


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/888 (49%), Positives = 562/888 (63%), Gaps = 68/888 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL  VS+IIPGQRTA FQRY RPEK+Y SFSLIYND  RSLDLICKDK
Sbjct: 50  LIWISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNDGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EAEVW+ GLKALI+ G   +     W  G +      D        +S +VT       
Sbjct: 110 VEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDGRDLTSNSASDSSISVT------- 162

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAA 174
                    +S+  +  +F   IS   +   NS     S   S  TN        + S +
Sbjct: 163 -------REISSPDISVSFNPNISPRSSRPENSPNSDRSHVASDNTNM-----QVKGSGS 210

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS  S+SSHGSA +D D+LGDV+IWGE I +  +  G  +     S + D LL
Sbjct: 211 DAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVIYDNAVKIGADKNANYVSTRADVLL 270

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +ES + LDVH+IACG RHA LVT+QGE+F+WGEESGGRLGHG   DV  P+L+E L+
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLA 330

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V+ VACGE+HTCAVT +G++YTWGDGT+N+GLLGHG+ VS WIP+++SG L+G+ ++
Sbjct: 331 VSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVA 390

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            ++CG WHTA+VTS G LFTFGDG+FG LGHGD  + + PREVE+L GLRT   +CGVWH
Sbjct: 391 SVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWH 450

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAAVV    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CV  LID N  ++
Sbjct: 451 TAAVVEVIVTQSSS---SISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKI 507

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSGHV+ MGS  YGQLG P ADG +P  V+ +++   VEE+ACGAYHVA
Sbjct: 508 ACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS ++VYTWGKGANG+LGHGD ++R +P LV+ LKD+ VK + CG N+TA ICLHK V
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAICLHKLV 627

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  + S CSSC   FGF RKRHNCYNCGLV C +CSSRK+ +AALAP+  KPYRVCD CF
Sbjct: 628 SGAEQSQCSSCRQAFGFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPGKPYRVCDSCF 687

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
            KL K                S  NR  +V   + E  DR  +      + ++ S+ D  
Sbjct: 688 VKLNKVSD------------ASNHNRRNSVPRLSGENKDRLDKAEIRLSKSTLPSNMDLI 735

Query: 715 KQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIF------LAKSSKKKFSASA 768
           KQ +++ +KQ  K +      + + ++ Q   +   K  +F       AK  K   + S 
Sbjct: 736 KQLDTKAAKQGKKAD-----TFSLVRSSQAPSLLQLKDVVFSSAIDLRAKVPKPVLTPSG 790

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
            +SR    + SP S + S  RS            S    D  ++ N+ LNQE+IKLRAQV
Sbjct: 791 VNSR----SVSPFSRRPSPPRSATPVPTTSGLSFSKSVTDSLRKTNELLNQEVIKLRAQV 846

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           E L  + +  E EL++++K+++   A+A +E+ K K A +VIKSLT Q
Sbjct: 847 ESLKQRCDFQELELQKSAKKVQEAMALAAEESSKSKAAKDVIKSLTAQ 894


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/886 (48%), Positives = 568/886 (64%), Gaps = 65/886 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL+ VSRIIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQ 118
            E EVW+ GLKALI+ G   + K+ G  +     D  R     +    +     D+    
Sbjct: 110 VEVEVWIAGLKALISSGQGGRSKIDGWSDGGLHLDDSRDLTSNSPSESSVSASRDLSSPD 169

Query: 119 VPLDNVSNNGLGKAFADIISYTEAANTNSRA----DSVSFSPSPLTNAFPDNSNDRSSAA 174
           V                   Y   ANT+  +    ++++F  S   +  P N   + S++
Sbjct: 170 V-------------------YVSLANTSPHSFHSENTLNFERSHAPSN-PSNMQVKGSSS 209

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS  S+SSHGSA +D+D+LGDV+IWGE I    +  G  +    FS +TD LL
Sbjct: 210 DVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSPRTDILL 269

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +ES + LDV  IACG +HA LVT+QGE+F+WGEESGGRLGHG   +V  P+L+E ++
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVEAMA 329

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V+ VACGE+HTCAVT +G+LYTWGDGT+N+GLLGHG+ VS WIP++++G L+G+ ++
Sbjct: 330 STTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVA 389

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            ++CG WHTA++TS G LFTFGDG+FG LGHGD  + S PREVE+L GLRT  V+CGVWH
Sbjct: 390 LVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWH 449

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA++    + SS+   S S GKLFTWGDGDK RLGHGDK+ RL P CV  LI++N  ++
Sbjct: 450 TAAIIEVIVTQSSA---SVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRI 506

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG V+TMGS  YGQLG P +DG +P  V+ + A   VEE+ACGAYHVA
Sbjct: 507 ACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS ++V+TWGKGANG+LGHGD ++R SPTLV+ LKD+ VK + CG N+++ ICLHKWV
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAICLHKWV 626

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+AALAP+  KPYRVCD CF
Sbjct: 627 SGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCF 686

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQ-DQLSILSSFDS 713
            KL K                   NR   +   + E  DR  + P L+  + ++ S+ D 
Sbjct: 687 VKLNKV------------AELGNNNRRNAMPRLSGENKDR-LEKPELRLTKTAVPSNMDL 733

Query: 714 NKQTESRLSKQNLK---------------LELQDNHVYPVNKNLQMGRIYSPKSSIFLAK 758
            KQ +S+ +KQ  K               L+L+D  V     +L+        +S  ++ 
Sbjct: 734 IKQLDSKAAKQGKKADTFSLVRTSQPQSLLQLKDV-VLSTAIDLKRTAPRPVLTSSGVSS 792

Query: 759 SSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEE 818
            S   FS   S  R    + +P+   S  + S ++T D  K+ N+ LNQE++KLR QVE 
Sbjct: 793 RSVSPFSRRPSPPR----SATPIPTTSGLSFSKSIT-DSLKKTNELLNQEVLKLRGQVET 847

Query: 819 LTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  + E  E EL+R++K+ +   A+A +E+ K K A EVIKSLT Q
Sbjct: 848 LRQRCELQELELQRSTKKAQEAMAVAAEESAKSKAAKEVIKSLTAQ 893


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/886 (49%), Positives = 566/886 (63%), Gaps = 64/886 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL+ VSRIIPGQRTA FQRY  PEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSSGERNLKLSSVSRIIPGQRTAVFQRYLCPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPRARIRKTSPTVTPFDFGDIQG-- 116
            EAEVW+ GLKALI+ G   + K+ G  +     D  R     +    +     DI    
Sbjct: 110 VEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDSRDLTSNSPSESSASVSRDISSPD 169

Query: 117 TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAET 176
             V L N S             Y E+     R    S +PS      P N   + S+++ 
Sbjct: 170 VSVSLANTSPQSF---------YFESTLNIER----SHAPSN-----PSNMQVKGSSSDV 211

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           FR+S+SS  S+SSHGSA +D+D+LGDV+IWGE I    +  G  +    FS +TD LLP+
Sbjct: 212 FRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPR 271

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
            +ES + LDV  IACG +HA LVT+QGE+F+WGEESGGRLGHG   +V  P+L+E ++  
Sbjct: 272 PLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVEAMAST 331

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            V+ VACGE+HTCAVT +G+LYTWGDGT+N+GLLGHG+ VS WIP++++G L+G+ ++ +
Sbjct: 332 TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALV 391

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           +CG WHTA++TS G LFTFGDG+FG LGHGD  + S PREVE+L GLRT  V+CGVWHTA
Sbjct: 392 TCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTA 451

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           AVV    + SS+   S S  KLFTWGDGDK RLGHGDK+ RL P CV+ LID N  ++AC
Sbjct: 452 AVVEVIVTQSSA---SVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIAC 508

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           GH L+V LTTSG V+TMGS+ YGQLG P +DG VP  V  ++A   VEE+ACGAYHVA L
Sbjct: 509 GHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAVL 568

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSS 596
           TS ++VYTWGKGANG+LGHGD ++R +PTLV+ LKD+ VK + CG N++A ICLHKWVS 
Sbjct: 569 TSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSG 628

Query: 597 VDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTK 656
            + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+A+LAP+  KPYRVCD CF K
Sbjct: 629 AEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRASLAPNPGKPYRVCDSCFVK 688

Query: 657 LKKTDTKLKRTSGYTSVVQSPRNRTGNVNHK-TAELADREAQGPRLQDQLSILSSFDSNK 715
           L K             V +S  N   N   + + E  DR  +      + ++ S+ D  K
Sbjct: 689 LIK-------------VAESGNNNRRNAMPRLSGENKDRLEKSELRLTKTAVPSNMDLIK 735

Query: 716 QTES----------------RLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKS 759
           Q +S                R S+    L+L+D     ++  + + R  +P+    L  S
Sbjct: 736 QLDSKAAAKQGKKADTFSLVRTSQPQSLLQLKD---VVLSTAIDLKRT-APRP--VLTPS 789

Query: 760 SKKKFSASASSSRMS-SLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEE 818
                S S  S R S   + +P+   S  + S ++T D  K+ N+ LNQE++KLR QVE 
Sbjct: 790 GVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIT-DSLKKTNELLNQEVLKLRGQVET 848

Query: 819 LTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  + E  E EL+R++K+ +   A+A +E+ K K A EVIKSLT Q
Sbjct: 849 LRQRCELQELELQRSTKKTQEAMALAAEESAKSKAAKEVIKSLTAQ 894


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/881 (49%), Positives = 569/881 (64%), Gaps = 54/881 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL  VS+IIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQ 118
            EAEVW+ GLKALI  G   + K+ G  +     D  R     ++   +     DI   +
Sbjct: 110 VEAEVWIAGLKALIISGQGGRSKIDGWSDGGLYLDDGRDLTPNSASDSSVSISRDISSPE 169

Query: 119 VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
           V + N + N   K F       E++  + R+   S +          N   + S ++ FR
Sbjct: 170 VSV-NFNPNTSPKNFQ-----LESSPHSDRSHVASEN---------TNMQVKGSGSDAFR 214

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  S+SSHGSA +D D+LGDV++WGE I +  +  G  +     S + D LLP+ +
Sbjct: 215 VSVSSAPSTSSHGSAPDDCDALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPL 274

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDVH+IACG RHA +VT+QGE+F+WGEESGGRLGHG   DV  P+L+E L+   V
Sbjct: 275 ESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTV 334

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACGE+HTCAVT +G++YTWGDG + +GLLGHG+ +S WIP+++SG L+G+ ++ ++C
Sbjct: 335 DFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTC 394

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WHTA+VTS G LFTFGDG+FG LGHG+  + + P+EVE+L GLRT  V+CGVWHTAAV
Sbjct: 395 GPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CV  LID N  ++ACGH
Sbjct: 455 VEVIVTQSSS---SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGH 511

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            L+V LTTSGHV+TMGS  YGQLG P ADG VP  V+ +++   VEE+ACGAYHVA LTS
Sbjct: 512 SLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTS 571

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            ++VYTWGKGANG+LGHGD ++R +PTLV+ LKDK VK + CG N++A ICLHKWVS  +
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICLHKWVSGSE 631

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            S CSSC   FGF RKRHNCYNCGLV C +CSSRK+ +AALAP+ +KPYRVCD CFTKL 
Sbjct: 632 QSQCSSCRQAFGFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFTKLN 691

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
           K                S  NR       + E  DR  +      +L++ S+ D  KQ +
Sbjct: 692 KVSD------------ASNTNRRNAGPRLSGENKDRLDKADLRLSKLTLPSNLDLIKQLD 739

Query: 719 SRLSKQNLK---LELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSS 775
           S+ +KQ  K     L  +   P    LQ+  +    +     K  K   + S  SSR   
Sbjct: 740 SKAAKQGKKADTFSLVWSSQAP--SLLQLKDVVLSSTIDLRPKVPKPVLTPSGVSSR--- 794

Query: 776 LATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRAQVEELTSKS 823
            + SP S + S  RS+           + +I DS K+ N+ LNQE++KLR QVE L  + 
Sbjct: 795 -SVSPFSRRPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRTQVESLRQRC 853

Query: 824 EHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           E  E+EL++++K+++   A+A +E+ K K A +V+KSLT Q
Sbjct: 854 EFQESELQKSAKKVQEAMAVAAEESAKSKAAKDVMKSLTAQ 894


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/890 (48%), Positives = 568/890 (63%), Gaps = 75/890 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW +   ER LKL+ VSRIIPGQRTA FQRY RPEK+Y SFSLIY++  RSLDLICKDK
Sbjct: 51  LIWITSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLICKDK 110

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVW+ GLKALI+ G   + K+   +                      D G I     
Sbjct: 111 AEAEVWIAGLKALISSGQGGRSKIDGWS----------------------DGGLILNDSR 148

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP----SPLTNAFPDNSND--RSSA 173
            L + S +    + +  IS  + ++T       S+ P    S  ++A PD +N   + SA
Sbjct: 149 DLTSNSPSESSASTSRGISSPDISSTLPNTSPKSYRPDNTISERSHASPDPTNMQVKGSA 208

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
           ++ FR+S+SS  S+SSHGSA +D+D+L DV+IWGE        G +  V Y FS + D L
Sbjct: 209 SDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCENVKVGADKNVNY-FSPRADVL 267

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           LP+ +ES + LDVH+IACG RHA LVT+QGE+F+WGEESGGRLGHG   +V  P+L+E L
Sbjct: 268 LPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEAL 327

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               ++ VACGE+H+CAVT +G+LYTWGDG +N+GLLGHGS VS WIP++++G L+G+ +
Sbjct: 328 ISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQI 387

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           ++++CG WHTA++TS G LFTFGDG+FG LGHGD  + S PREVE+L GLRT  V+CGVW
Sbjct: 388 AFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVW 447

Query: 414 HTAAVV--VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           HTAAVV  +AT S +S      S GKLFTWGDGDK RLGHGDKE RL P CV+ LID N 
Sbjct: 448 HTAAVVEVIATHSGTS-----ISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNF 502

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            ++ACGH L+V LTTSG V+TMGS  YGQLG  ++DG VP  V  +IA   +EE+ACGAY
Sbjct: 503 HKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAY 562

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           HVA LTS ++VYTWGKGANG+LGHGD ++R +P LV+ LKD+ VK + CG N++A ICLH
Sbjct: 563 HVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAICLH 622

Query: 592 KWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCD 651
           KWVS  + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+AA AP+  KPYRVCD
Sbjct: 623 KWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCD 682

Query: 652 DCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSF 711
            C+ KL K                   NR   +   + E  DR  +      +  I S+ 
Sbjct: 683 SCYAKLNKVAEACN------------SNRRNALPRLSGENKDRLDKSDLRLSKAVIPSNM 730

Query: 712 DSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIF-----LAKSSKKKFSA 766
           D  KQ +S+ +KQ  K        + + +  Q   +   K  +      L ++  +   A
Sbjct: 731 DLIKQLDSKAAKQGKK-----GDTFSLIRPSQPPSLLQLKDVVLSTALDLRRTVPRPVVA 785

Query: 767 SASSSRMSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRA 814
               S +SS + SP S +SS  RS+           + +I DS K+ N+ LNQE+ KL A
Sbjct: 786 ---PSGVSSRSVSPFSRRSSPPRSATPIPTTSGLSFSKSISDSLKKTNELLNQEVQKLHA 842

Query: 815 QVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           QVE L  + E  E EL+R++K+ +  TA+A +E+ K K A EVIKSLT Q
Sbjct: 843 QVESLRQRCELQELELQRSAKKTQEATALAAEESGKSKAAKEVIKSLTAQ 892


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/886 (48%), Positives = 561/886 (63%), Gaps = 77/886 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYS  EER LKL+ VSRIIPGQRTA F+RY RPEK+Y SFSL+YN  +RSLDLICKDK
Sbjct: 50  LIWYSHGEERNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPF-DFGD-IQGT 117
            EAEVWL GL+ALI+ G H                   R R+T   +  F D GD IQ  
Sbjct: 110 VEAEVWLAGLQALISTGQH-------------------RNRRTRSDIPDFHDGGDFIQNG 150

Query: 118 Q---VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAA 174
           +   V LD  S+   G++  D+         +SR  S++++ S    +   N   R+S  
Sbjct: 151 RPFGVNLDFASSIARGRSSVDL---------SSRDSSLNWASSD-AGSERTNMQLRTSGV 200

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FRIS+SS  S SS GS  +D +SLGDV++WGE   +G L  G       F  + D L 
Sbjct: 201 DGFRISVSSTPSCSSQGSGPDDIESLGDVYVWGEVWCDGVLPDGSVS---PFPIKIDVLT 257

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK++ES + LDVH IACG RH  LVT+QGE+F+WGEESGGRLGHG + D S P L+E L+
Sbjct: 258 PKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLA 317

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             NV+ VACGEYHTCAV+ SGDL+TWGDGT+N+GLLGHG++VS WIP++VSG L+G+ + 
Sbjct: 318 VNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVL 377

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            ++CG WH+A+ TS G LFTFGDG+FG LGHGD  S   PREV+ L GL+T +V+CGVWH
Sbjct: 378 SVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWH 437

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA++     S ++     S  KLFTWGDGDK RLGHG KE  L P CV+ LID N  Q+
Sbjct: 438 TAAIIEVMSQSGTN----ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQL 493

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH ++VALTTSGHV+TMG  AYGQLG P++DG +P  V  ++   FVEE++CGAYHVA
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVA 553

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWG+GANG+LGHGD ++R SPT V+ LKD+ VK + CG NFTA IC+HKWV
Sbjct: 554 VLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWV 613

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D SVCS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD C+
Sbjct: 614 SGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCY 673

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR----EAQGPRLQDQLSILSS 710
            KLK  +      +G  S+     NR   V  ++ +   R    E +  R+      ++ 
Sbjct: 674 AKLKAAE------AGDASIF----NRKNTVPRRSIDATIRSDRGEVRSARILMSPGPINY 723

Query: 711 FDSNKQTESRL-SKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASAS 769
           F+      +RL  + +    +Q +    + K++       P S   L  + K   +AS  
Sbjct: 724 FEFKP---ARLGPRPDPSPMIQSSQGPSLLKDIAF-----PSSLSALQNALKPVITASPQ 775

Query: 770 SSRMS------SLATSPVSGKSSSARS-----SAVTIDDSKQMNDSLNQEIIKLRAQVEE 818
           ++         S   SP S + S  RS     S   ID  K+ N+ LNQE+ KL+ QV  
Sbjct: 776 TAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRS 835

Query: 819 LTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  KSE  +AE+++  K  +    +A +E+ KC  A EV+KS+T Q
Sbjct: 836 LKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITTQ 881


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/736 (59%), Positives = 527/736 (71%), Gaps = 38/736 (5%)

Query: 149 ADSVSFSPSPLTNAFPDNSN--DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIW 206
           +DS + S   +++   DN+N   R    + FR+S SS VSSSSHGS H+D D+LGDVFIW
Sbjct: 13  SDSNAGSVHSMSSGHSDNTNGHPRGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIW 72

Query: 207 GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIF 266
           GEG   G LGGG  RVG S   + D L+PK +E  + LDV NI+CG RHA LVTKQGEI+
Sbjct: 73  GEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIY 132

Query: 267 SWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN 326
           SWGEESGGRLGHG + DVS P+LI+ LS +N+ELVACGEYHTCAVT SGDLYTWGDGT+ 
Sbjct: 133 SWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFK 192

Query: 327 SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
            GLLGHG+ VS W+P+ V+G L+GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHG
Sbjct: 193 FGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
           D  S S+PREVE+L+GLRT R +CGVWHTAAVV     + +S S + S GK+FTWGDGDK
Sbjct: 253 DRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM--AGNSSSSNCSSGKIFTWGDGDK 310

Query: 447 GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           GRLGHGDKE +L P CVA L++ N CQVACGH L+VALTTSGHVYTMGSA YGQLG   A
Sbjct: 311 GRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQA 370

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
           DG++P RV+G++ ++FVEE++CGAYHVA LTS ++VYTWGKGANG+LGHGD D++N+PTL
Sbjct: 371 DGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTL 430

Query: 567 VDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFC 626
           V+ LKDKQV+ VVCG+NFTA IC+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC
Sbjct: 431 VEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFC 490

Query: 627 KACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNH 686
            +CSS+KSLKA+LAP+ NKPYRVCD C++KL         T G  + + S   R   V  
Sbjct: 491 HSCSSKKSLKASLAPNTNKPYRVCDTCYSKL---------TKGPETDMHSSAKRAATVPG 541

Query: 687 KTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------ 740
            +  +   E    R   QLS LSS +S K  +SR SK+N K E     V PV        
Sbjct: 542 FSDTI--EEDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWS 599

Query: 741 NLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR----------- 789
            L + R ++P   +F   SSKK FSAS   SR+ S ATSP+S ++S  R           
Sbjct: 600 GLNISRSFNP---VF--GSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGL 654

Query: 790 -SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEA 848
            S  V  +D K  ND+L+QE++ LR+QVE LT KS+ LE ELERT+KQLK   +IA +E 
Sbjct: 655 TSPRVVPNDGKPTNDALSQEVLNLRSQVESLTRKSQLLEVELERTTKQLKEAISIAGEET 714

Query: 849 EKCKTANEVIKSLTVQ 864
            KCK A EVIKSLT Q
Sbjct: 715 AKCKAAKEVIKSLTAQ 730


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/886 (48%), Positives = 573/886 (64%), Gaps = 71/886 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDR--SLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RP+K+Y SFSLIY++R  +LDLICKDK
Sbjct: 45  LIWISNGGEKRLKLATVSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDK 104

Query: 60  DEAEVWLVGLKALIT----RGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPF----DF 111
            EAEVW+ GLKALI+    R     W  G ++ + S D     +  +SPT +      DF
Sbjct: 105 VEAEVWIAGLKALISGQAGRSKIDGWSDGGLSIADSRD-----LTLSSPTNSSVCASRDF 159

Query: 112 GDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS 171
                      N++++          S TE + ++ R+   S SP+ L          R 
Sbjct: 160 -----------NIADSPYNSTNFPRTSRTENSVSSERSHVASDSPNMLV---------RG 199

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQT 230
           + ++ FR+S+SSV SSSSHGSA +D D+LGDV+IWGE +       G +  +GY  SR +
Sbjct: 200 TGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSR-S 258

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D L+PK +ES + LDVH+IACG +HA LV++QGE+F+WGE SGGRLGHG   DV+ PQLI
Sbjct: 259 DVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLI 318

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           E L+  +++ VACGE+HTCAVT +G++YTWGDGT+N+GLLGHG+ VS WIP+++SG L+G
Sbjct: 319 ESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG 378

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ +SCG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT  V+C
Sbjct: 379 LQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVAC 438

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           GVWH AA+V    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CV+ LID  
Sbjct: 439 GVWHAAAIVEVIVTHSSS---SVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT 495

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
             +VACGH L+V LTTSG VYTMGS  YGQLG P ADG +P  V+ ++ +  VEE+ACGA
Sbjct: 496 FHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGA 555

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           YHVA LTS ++V+TWGKGANG+LGHGD ++R +PTLVD LK++ VK + CG NFTA ICL
Sbjct: 556 YHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAICL 615

Query: 591 HKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVC 650
           HKWVS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+KSLKAALAP+  KPYRVC
Sbjct: 616 HKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVC 675

Query: 651 DDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSS 710
           D C +KL K            + + S +N    ++ +  +  D+     RL     I S+
Sbjct: 676 DSCHSKLSKVS---------EANIDSRKNVMPRLSGENKDRLDKTEI--RLAKS-GIPSN 723

Query: 711 FDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASS 770
            D  KQ ++R ++Q  K    D           + ++    +++   +    K + + SS
Sbjct: 724 IDLIKQLDNRAARQGKK---ADTFSLVRTSQTPLTQLKDALTNVADLRRGPPKPAVTPSS 780

Query: 771 SRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEE 818
           SR      SP S +SS  RS            S    +  K+ N+ LNQE+++LRAQ E 
Sbjct: 781 SR----PVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRLRAQAES 836

Query: 819 LTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  + E  E E++++ K+++   ++A +E+ K + A EVIKSLT Q
Sbjct: 837 LRHRCEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLTAQ 882


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/884 (48%), Positives = 565/884 (63%), Gaps = 60/884 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S K ER LKL  +SRIIPGQRTA F+RY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSKGERSLKLASISRIIPGQRTAVFERYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EAE W+ GLKALI  G   +     W  G +      +        +S +V        
Sbjct: 110 VEAEAWISGLKALIASGQGGRSKIDGWSDGGLYLDEGCELTSNSPSDSSHSVN------- 162

Query: 115 QGTQVPLDNVSNNGLGKAFADI-ISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSA 173
                  DN S        A+I +  ++  N  ++ +    S +        N   + S+
Sbjct: 163 ------RDNSSPEFFVSYNANISLKTSQPENNIAKLERAHVSLNQT------NMQVKGSS 210

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
           ++  R+S+SS  S+SSHGSA +D D+LGDV+IWGE + +  +  G  +     + +TD L
Sbjct: 211 SDVMRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVL 270

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           LP+ +ES + LD+H+IACG RHA LVT+QGE+F+WGEESGGRLGHG   DV  P+++E L
Sbjct: 271 LPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESL 330

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +  ++  VACGE+HTCAVT +G+LYTWGDGT+N+GLLGHGS VS WIP++VSG L+G+ +
Sbjct: 331 AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQV 390

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++CG WHTA+VTS G LFTFGDG+FGALGHGD  + S P+EVE+L GLRT  V+CGVW
Sbjct: 391 TSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAVACGVW 450

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAAVV    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CV  LID +  +
Sbjct: 451 HTAAVVEVIVTQSSS---SISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHK 507

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           VACGH ++V LTTSG V++MGS  YGQLG P ADG +P  V+ ++    VEEV+CGAYHV
Sbjct: 508 VACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHV 567

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
             LTS ++VYTWGKGANG+LGHGD ++R +PTLV+ LKD+ VK + CG N+TA ICLHKW
Sbjct: 568 VVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAICLHKW 627

Query: 594 VSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDC 653
           VSS + S CS+C   FGF RKRHNCYNCGLV C +CSSRK+L+AALAP+  K YRVCD C
Sbjct: 628 VSSAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDSC 687

Query: 654 FTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDS 713
           +TKL K    +              NR   +   + E  DR      ++   S+ S+ D 
Sbjct: 688 YTKLMKAAEAIN------------NNRKNAMPRLSGENKDR-IDKTDMKISKSVPSNLDL 734

Query: 714 NKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKK-FSASASSSR 772
            KQ +++ +KQ  K +           +L   R     +++ L +++ K   +AS  SSR
Sbjct: 735 IKQLDNKAAKQGKKADTFSLVRSSQAPSLLQLRDVVLSTAVDLRRTAPKPVLTASGVSSR 794

Query: 773 MSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRAQVEELT 820
               + SP S K S  RS+           + +I DS K+ ND LN E++KLR+QVE L 
Sbjct: 795 ----SVSPFSRKPSPPRSATPVPTASGLSFSKSITDSLKKTNDLLNHEVLKLRSQVESLR 850

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            K E  E EL+++ K+ +   A+A +E+ K K A EVIK LT Q
Sbjct: 851 QKCELQEQELQKSLKKTREAMALAAEESGKSKAAKEVIKLLTAQ 894


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/911 (49%), Positives = 589/911 (64%), Gaps = 57/911 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYSG EE++L L+ VSRIIPGQRT  F RYPRPEKE QS SL+++  +RSLD+ICKDK
Sbjct: 50  LIWYSGGEEKRLWLSTVSRIIPGQRTPVFLRYPRPEKECQSLSLLHSNEERSLDVICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGDIQGT 117
           DEAEVW VGLKA +      K K   +    + D  SP A  R +SP  +P  FG     
Sbjct: 110 DEAEVWFVGLKASVAGAQLRKSKFNNVRHERTVDIVSP-ALTRNSSPLTSP--FGSTDNL 166

Query: 118 QVPLDNV--SNNGLGKAFADIISY----TEAANTNSRADSVSFSPSPLTNAFPDNSNDR- 170
           Q    +   +++ +G        Y    T   ++ +  D+ S   S  + +    S+   
Sbjct: 167 QQESGDFFKTSSFIGSPLQSEKGYLGGPTSTIDSKNNFDAGSVGGSMHSGSSSMGSDSVS 226

Query: 171 -------SSAAETFRISLSSVVSSSSHGSAH-ED----FDSLGDVFIWGEGIANGFLGGG 218
                  +  ++ +RIS+SS VSSSS  S H ED     + LGDV++WGEG+ +G LGGG
Sbjct: 227 AHLRLAGAGQSDNYRISMSSAVSSSSQSSQHGEDGLHYAEPLGDVYMWGEGVGDGILGGG 286

Query: 219 EHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH 278
            HR+G   +   DALLPK +ES + LDV  IACG +HA LVTKQGE+F+WGEESGGRLGH
Sbjct: 287 IHRIGSGGAINLDALLPKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGH 346

Query: 279 GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
           G + DVSHPQL+E L+    E+VACGEYH CAVT SGDLY+WGDGT+N GLLGHG+ +S 
Sbjct: 347 GVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISH 406

Query: 339 WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE 398
           WIP++V+G L+G+ ++ I+CG WHTA+VT+ G LFTFGDG+FG LGH D  S   PREVE
Sbjct: 407 WIPKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVE 466

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL 458
           +L+GLRT R +CGVWHTAAVV     SSS+ S S+   KLFTWGDG+KGRLGHGDKE RL
Sbjct: 467 SLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSG--KLFTWGDGEKGRLGHGDKEQRL 524

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI 518
            P CVA L+D N  QVACG+ L+VALTT G V+TMGS+ YGQLG P ADG +P  V+G++
Sbjct: 525 VPTCVAALVDHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKL 584

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            E++VE++ACGA+HVA LT  S+VYTWGKGANG+LGHGD ++RN+PTLV+ LK+KQVK +
Sbjct: 585 VEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSI 644

Query: 579 VCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAA 638
            CG  FTA ICLHKW+S  D + CS C  PFGF RKRHNCYNCGLV+C ACSS+K+LKA+
Sbjct: 645 ACGATFTAAICLHKWLSGADQNACSGCKQPFGFTRKRHNCYNCGLVYCHACSSKKALKAS 704

Query: 639 LAPSINKPYRVCDDCFTKLKKT-DTKLKRTSGYTSVVQSPRNRTGNVNHKT--AELADRE 695
           LAP+  KP+RVCD CF KL+K  +  L   +  +      RNR   V   +   E     
Sbjct: 705 LAPNPGKPFRVCDPCFLKLRKAGEGGLGGVAALSKRSVPNRNRGVEVKDGSGKGEFRAPR 764

Query: 696 AQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIF 755
            QGP    +  I   F    + +S  +K+  K E   + + P    +  G  +   S   
Sbjct: 765 PQGPN-TGRPPITLEFGKVGEGKSG-TKRGKKPENSSSRISPAPNGVSSGATWGAVS--V 820

Query: 756 LAKSSKKKF----------SASASSSRMSSLATSPVSGKSSSARSSA------------V 793
            A  SK  F          S+SA + R  S A SP+S +SS  RS+              
Sbjct: 821 PAGFSKPPFQTGLNGPVAVSSSAVAGRAVSRAVSPLSRRSSPPRSTTPTPTGSGLVIPKT 880

Query: 794 TIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKT 853
            ++D K+ ND+L+ E I+LR+QVE L  + ++ E E++R+++QL+   ++A +EA K + 
Sbjct: 881 VVEDLKKTNDALSDENIQLRSQVESLARQLQNHEKEVQRSAQQLQNAISLATEEAAKSRA 940

Query: 854 ANEVIKSLTVQ 864
           A EVIKSLT Q
Sbjct: 941 AKEVIKSLTSQ 951


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/889 (48%), Positives = 565/889 (63%), Gaps = 67/889 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RPEK+Y SFSL+YN   +SLDLICKDK
Sbjct: 50  LIWISSSGEKRLKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPR--ARIRKTSPTVTPFDFGDIQG 116
            EAE+W+ GLK LI+ G   + K+ G      S D+ R       +S + +        G
Sbjct: 110 VEAEIWIGGLKTLISTGQGGRSKINGWSGGGLSVDASRELTSSSPSSSSASASRGHSSPG 169

Query: 117 TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS--SAA 174
           T   +D +++    +         E   T+S    V+           DN N ++  S +
Sbjct: 170 TPFNIDPITSPKSAEP--------EVPPTDSEKSHVAL----------DNKNMQTKVSGS 211

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS  SSSSHGSA +D D+LGDV+IWGE I +  +  G  +     + +TD L+
Sbjct: 212 DGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLV 271

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDVH IACG RHA  VT+QGEIF+WGEESGGRLGHG   DV HP+L+E L+
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLT 331

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + V+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHGS +S WIP++++G+L+G+H+
Sbjct: 332 ATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHV 391

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + +SCG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT  VSCGVW
Sbjct: 392 ASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVW 451

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAAVV      + S S S S GKLFTWGDGDK RLGHGDK+PRL P CV  LID N  +
Sbjct: 452 HTAAVVEII--VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK 509

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           +ACGH L+V LTTSG V+TMGS  YGQLG    DG +P  V+ ++A  FVEE++CGAYHV
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
           AALTS ++VYTWGKGANG+LGHGD ++R  PT+V+ LKD+ VK + CG N+TA ICLHKW
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKW 629

Query: 594 VSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDC 653
           VS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+ +AALAPS  + YRVCD C
Sbjct: 630 VSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSC 689

Query: 654 FTKLKKT----DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           + KL K     DT  +R S    +    R+R      + A+                  S
Sbjct: 690 YVKLSKVSEINDTN-RRNSAVPRLSGENRDRLDKSEIRLAKFG---------------TS 733

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI--FLAKSSKKKFSAS 767
           + D  KQ +S+ +KQ  K +      + + +N Q+  +   K ++   +    +     +
Sbjct: 734 NMDLIKQLDSKAAKQGKKTD-----TFSLGRNSQLPSLLQLKDAVQSNIGDMRRATPKLA 788

Query: 768 ASSSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIKLRAQ 815
            + S +SS + SP S +SS  RS+                D+ K+ N+ LNQEI+KLR Q
Sbjct: 789 QAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 848

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           V+ LT K E  E EL+ + K+ +   A+AE+E+ K + A E IKSL  Q
Sbjct: 849 VDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 897


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/882 (48%), Positives = 565/882 (64%), Gaps = 61/882 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDR--SLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RP+K+Y SFSLIY++R  +LDLICKDK
Sbjct: 50  LIWISNGGEKRLKLATVSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDK 109

Query: 60  DEAEVWLVGLKALIT----RGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFG-DI 114
            EAEVW+ GLKALI+    R     W  G ++ + S D     +  +SPT +      D 
Sbjct: 110 VEAEVWIAGLKALISGQAGRSKIDGWSDGGLSIADSRD-----LTLSSPTNSSVCASRDY 164

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAA 174
              + P ++        AF    S TE + ++ R+   S SP+ L          R   +
Sbjct: 165 NIAETPYNST-------AFPRT-SRTENSVSSERSHVASDSPNMLV---------RGPGS 207

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SSV SSSSHGSA +D D+LGDV+IWGE + +     G  +       ++D L+
Sbjct: 208 DVFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLI 267

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDVH+IACG RHA LV++QGE+F+WGE SGGRLGHG   DV+ PQLIE L+
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLA 327

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             +V+ VACGE+HTCAVT +G++YTWGDGT+N+GLLGHG+ VS WIP+++SG L+G+ ++
Sbjct: 328 ATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIA 387

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            +SCG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT  V+CGVWH
Sbjct: 388 SVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWH 447

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
            AA+V    + S+S   S S GKLFTWGDGDK RLGHGDKE RL P CV+ LID    +V
Sbjct: 448 AAAIVEVIVTQSTS---SISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRV 504

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG VYTMGS  YGQLG P ADG +P  V+ ++ +  VEE+ACGAYHVA
Sbjct: 505 ACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS ++V+TWGKGANG+LGHGD ++R +P+LVD LK++ VK + CG NFTA ICLHKWV
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKWV 624

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  + S CS+C   FGF RKRHNCYNCGLV C +CSS+KSLKAALAP+  KPYRVCD C+
Sbjct: 625 SGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCY 684

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
           +KL K                S  +R   +   + E  DR  +      +  I S+ D  
Sbjct: 685 SKLSKVSE------------ASTDSRKNIMPRLSGENKDRLDKAEIRLAKSGIPSNIDLI 732

Query: 715 KQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMS 774
           +Q +SR ++Q  K +      + + +  Q        +   +A   +     + + S  S
Sbjct: 733 RQLDSRAARQGKKAD-----TFSLVRTSQTPLTQLRDALTNVADLRRGPPKPAVTPSGAS 787

Query: 775 SLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTSK 822
           S + SP S +SS  RS            S    +  K+ N+ LNQE++KLRAQ E L  +
Sbjct: 788 SRSVSPFSRRSSPPRSVTPIPLTAGLGFSTSIAESLKKTNELLNQEVVKLRAQAESLRHR 847

Query: 823 SEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            E  E E++++ K++K    +A +E+ K + A EVIKSLT Q
Sbjct: 848 CEVQEFEVQKSVKKVKEAMNLAAEESAKSEAAKEVIKSLTAQ 889


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/889 (48%), Positives = 565/889 (63%), Gaps = 67/889 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RPEK+Y SFSL+YN   +SLDLICKDK
Sbjct: 50  LIWISSSGEKRLKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPR--ARIRKTSPTVTPFDFGDIQG 116
            EAE+W+ GLK LI+ G   + K+ G      S D+ R       +S + +        G
Sbjct: 110 VEAEIWIGGLKTLISTGQGGRSKIDGWSGGGLSVDASRELTSSSPSSSSASASRGHSSPG 169

Query: 117 TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS--SAA 174
           T   +D +++    +         E   T+S    V+           DN N ++  S +
Sbjct: 170 TPFNIDPITSPKSAEP--------EVPPTDSEKSHVAL----------DNKNMQTKVSGS 211

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS  SSSSHGSA +D D+LGDV+IWGE I +  +  G  +     + +TD L+
Sbjct: 212 DGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLV 271

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDVH IACG RHA  VT+QGEIF+WGEESGGRLGHG   DV HP+L+E L+
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLT 331

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + V+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHGS +S WIP++++G+L+G+H+
Sbjct: 332 ATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHV 391

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + +SCG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT  VSCGVW
Sbjct: 392 ASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVW 451

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAAVV      + S S S S GKLFTWGDGDK RLGHGDK+PRL P CV  LID N  +
Sbjct: 452 HTAAVVEII--VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK 509

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           +ACGH L+V LTTSG V+TMGS  YGQLG    DG +P  V+ ++A  FVEE++CGAYHV
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 569

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
           AALTS ++VYTWGKGANG+LGHGD ++R  PT+V+ LKD+ VK + CG N+TA ICLHKW
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKW 629

Query: 594 VSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDC 653
           VS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+ +AALAPS  + YRVCD C
Sbjct: 630 VSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSC 689

Query: 654 FTKLKKT----DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           + KL K     DT  +R S    +    R+R      + A+                  S
Sbjct: 690 YVKLSKVSEINDTN-RRNSAVPRLSGENRDRLDKSEIRLAKFG---------------TS 733

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI--FLAKSSKKKFSAS 767
           + D  KQ +S+ +KQ  K +      + + +N Q+  +   K ++   +    +     +
Sbjct: 734 NMDLIKQLDSKAAKQGKKTD-----TFSLGRNSQLPSLLQLKDAVQSNIGDMRRATPKLA 788

Query: 768 ASSSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIKLRAQ 815
            + S +SS + SP S +SS  RS+                D+ K+ N+ LNQEI+KLR Q
Sbjct: 789 QAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 848

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           V+ LT K E  E EL+ + K+ +   A+AE+E+ K + A E IKSL  Q
Sbjct: 849 VDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 897


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/889 (48%), Positives = 565/889 (63%), Gaps = 67/889 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RPEK+Y SFSL+YN   +SLDLICKDK
Sbjct: 55  LIWISSSGEKRLKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDK 114

Query: 60  DEAEVWLVGLKALITRGTHSKWKL-GTINCSTSSDSPR--ARIRKTSPTVTPFDFGDIQG 116
            EAE+W+ GLK LI+ G   + K+ G      S D+ R       +S + +        G
Sbjct: 115 VEAEIWIGGLKTLISTGQGGRSKIDGWSGGGLSVDASRELTSSSPSSSSASASRGHSSPG 174

Query: 117 TQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS--SAA 174
           T   +D +++    +         E   T+S    V+           DN N ++  S +
Sbjct: 175 TPFNIDPITSPKSAEP--------EVPPTDSEKSHVAL----------DNKNMQTKVSGS 216

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS  SSSSHGSA +D D+LGDV+IWGE I +  +  G  +     + +TD L+
Sbjct: 217 DGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLV 276

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDVH IACG RHA  VT+QGEIF+WGEESGGRLGHG   DV HP+L+E L+
Sbjct: 277 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLT 336

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + V+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHGS +S WIP++++G+L+G+H+
Sbjct: 337 ATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHV 396

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + +SCG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT  VSCGVW
Sbjct: 397 ASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVW 456

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAAVV      + S S S S GKLFTWGDGDK RLGHGDK+PRL P CV  LID N  +
Sbjct: 457 HTAAVVEII--VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK 514

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           +ACGH L+V LTTSG V+TMGS  YGQLG    DG +P  V+ ++A  FVEE++CGAYHV
Sbjct: 515 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 574

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
           AALTS ++VYTWGKGANG+LGHGD ++R  PT+V+ LKD+ VK + CG N+TA ICLHKW
Sbjct: 575 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKW 634

Query: 594 VSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDC 653
           VS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+ +AALAPS  + YRVCD C
Sbjct: 635 VSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSC 694

Query: 654 FTKLKKT----DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           + KL K     DT  +R S    +    R+R      + A+                  S
Sbjct: 695 YVKLSKVSEINDTN-RRNSAVPRLSGENRDRLDKSEIRLAKFG---------------TS 738

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI--FLAKSSKKKFSAS 767
           + D  KQ +S+ +KQ  K +      + + +N Q+  +   K ++   +    +     +
Sbjct: 739 NMDLIKQLDSKAAKQGKKTD-----TFSLGRNSQLPSLLQLKDAVQSNIGDMRRATPKLA 793

Query: 768 ASSSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIKLRAQ 815
            + S +SS + SP S +SS  RS+                D+ K+ N+ LNQEI+KLR Q
Sbjct: 794 QAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 853

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           V+ LT K E  E EL+ + K+ +   A+AE+E+ K + A E IKSL  Q
Sbjct: 854 VDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 902


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/893 (48%), Positives = 566/893 (63%), Gaps = 75/893 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E++LKL  VS+I+PGQRTA FQRY RPEK+Y SFSL+YN   +SLDLICKDK
Sbjct: 50  LIWISSSGEKRLKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTV-------- 106
            EAE+W+ GLK LI+ G   +     W  G ++   S D   +    +S +         
Sbjct: 110 VEAEIWIGGLKTLISTGQGGRSKIDGWSGGGLSVDASRDLTSSSPSSSSASASRGHSSPG 169

Query: 107 TPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDN 166
           TPF+F  +                K+    +  T+   ++   D+              N
Sbjct: 170 TPFNFDPVASP-------------KSVEPEVPPTDTEKSHVALDN-------------KN 203

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
              + S ++ FR+S+SS  SSSSHGSA +D D+LGDV+IWGE I +  +  G  +     
Sbjct: 204 MQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYL 263

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
           + +TD L+PK +ES + LDVH IACG RHA  VT+QGEIF+WGEESGGRLGHG   DV H
Sbjct: 264 TTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFH 323

Query: 287 PQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           P+L+E L+  + V+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHGS +S WIP++++
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L+G+H++ ++CG WHTA++TS G LFTFGDG+FG LGHGD  +   PREVE+L GLRT
Sbjct: 384 GCLEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRT 443

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             VSCGVWHTAAVV    + S+S   S S GKLFTWGDGDK RLGHGDK+PRL P CV  
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNS--SSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPA 501

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           LID N  ++ACGH L+V LTTSG V+TMGS  YGQLG    DG +P  V+ ++A  FVEE
Sbjct: 502 LIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEE 561

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           ++CGAYHVAALTS ++VYTWGKGANG+LGHGD ++R  PTLV+ LKD+ VK + CG N+T
Sbjct: 562 ISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYT 621

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINK 645
           A ICLHKWVS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+ +AALAPS  +
Sbjct: 622 AAICLHKWVSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGR 681

Query: 646 PYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQL 705
            YRVCD C+ KL K  +++  T+   SVV  PR         + E  DR  +      + 
Sbjct: 682 LYRVCDSCYVKLSKV-SEINDTNRRNSVV--PR--------LSGENKDRLDKSEIRLAKF 730

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI--FLAKSSKKK 763
              S+ D  KQ +S+ +KQ  K +      + + +N Q+  +   K ++   +    +  
Sbjct: 731 GT-SNMDLIKQLDSKAAKQGKKTD-----TFSLGRNSQLPSLLQLKDAVQSNIGDMRRAT 784

Query: 764 FSASASSSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIK 811
              + + S +SS + SP S +SS  RS+                D+ K+ N+ LNQEI+K
Sbjct: 785 PKLAPAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVK 844

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           LR QV+ LT K E  E EL+ + K+ +   A+AE+E+ K + A E IKSL  Q
Sbjct: 845 LRTQVDSLTQKCELQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 897


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/871 (49%), Positives = 565/871 (64%), Gaps = 76/871 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY----NDRSLDLICK 57
           LIW+SG++ERQL+L+ V++IIPGQRTA FQRYPRPEKEYQSFSLIY     +RSLDLICK
Sbjct: 51  LIWFSGRKERQLRLDAVTKIIPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLDLICK 110

Query: 58  DKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGDIQ 115
           DKDEAEVW VGLKA ++  ++   K+   +  T SD  SP  R  + SP  +   F    
Sbjct: 111 DKDEAEVWFVGLKARVS--SNRTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYDSFNRSP 168

Query: 116 GTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS-SAA 174
                L   ++ G        +   E+A ++S A   S            N+  RS S A
Sbjct: 169 YGSPSLFKTASTGE-------LQSVESAKSDSLASEESL-----------NAQGRSVSLA 210

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS VSSSS GS  ED D+LGDVFIWGEG   GFLGGG  ++      + D+L+
Sbjct: 211 DAFRVSMSSAVSSSSQGSGPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLV 270

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PKA+++ + LDV +IACG+RHA LVTKQG++F WGEE GGRLGHG + DVS PQL++ L+
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           GVN ELVACG++HTCAVT SG+LYTWG    + GL+GH + VS W+P+++S  L+G+ +S
Sbjct: 331 GVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 390

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            I+CG WHTA+V+SAG LFTFGDG+FG LGHGD  + +IP+EVE+L+GL+T R +CG+WH
Sbjct: 391 SIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWH 450

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAAVV      SS+ S S+  GKLFTWGDGDK RLGHGDKE +L P CVA L+D N  QV
Sbjct: 451 TAAVVEVIVGYSSATSCSS--GKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQV 508

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+VALTTSG V+TMGS  YGQLG P ADG VP  VDGE+A +FVEE+ CGA+HVA
Sbjct: 509 ACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVA 568

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           AL+S +++YTWGKGANG+LGHGD ++R +PTLV+ L+DKQVK V CG +FTA+ICLHK V
Sbjct: 569 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPV 628

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D SVCS C   FGF RKRHNCYNCGL +C +CSS+K+ +A+LAP+ +K YRVC+ C 
Sbjct: 629 SDADQSVCSGCKQAFGFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCL 688

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
            KL+++ ++                    V  K+ +  D                     
Sbjct: 689 AKLERSASE-------------------EVARKSRKYMDGR------------------- 710

Query: 715 KQTESRLSKQNLKLELQDNHVYPVNKNL-QMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
              E  L + +  +E++    Y  ++N       +    +I  A   +K  SA  S  R 
Sbjct: 711 ---ERPLIRASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAIPERKAVSAKPSPPR- 766

Query: 774 SSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERT 833
            S   +P S   +   +     D+ ++  +   QE++ L+ Q+  LTSK E  E EL R 
Sbjct: 767 -SATPTPTSAGLAPPGNGP---DELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRG 822

Query: 834 SKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +++++    +A +E  KC+ A EVIKSLTV+
Sbjct: 823 AQKVQEAVLLAGEETAKCRAAKEVIKSLTVE 853


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/871 (49%), Positives = 565/871 (64%), Gaps = 76/871 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY----NDRSLDLICK 57
           LIW+SG++ERQL+L+ V++IIPGQRTA FQRYPRPEKEYQSFSLIY     +RSLDLICK
Sbjct: 60  LIWFSGRKERQLRLDAVTKIIPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLDLICK 119

Query: 58  DKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSD--SPRARIRKTSPTVTPFDFGDIQ 115
           DKDEAEVW VGLKA ++  ++   K+   +  T SD  SP  R  + SP  +   F    
Sbjct: 120 DKDEAEVWFVGLKARVS--SNRTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYDSFNRSP 177

Query: 116 GTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS-SAA 174
                L   ++ G        +   E+A ++S A   S            N+  RS S A
Sbjct: 178 YGSPSLFKTASTGE-------LQSVESAKSDSLASEESL-----------NAQGRSVSLA 219

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           + FR+S+SS VSSSS GS  ED D+LGDVFIWGEG   GFLGGG  ++      + D+L+
Sbjct: 220 DAFRVSMSSAVSSSSQGSGPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLV 279

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PKA+++ + LDV +IACG+RHA LVTKQG++F WGEE GGRLGHG + DVS PQL++ L+
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           GVN ELVACG++HTCAVT SG+LYTWG    + GL+GH + VS W+P+++S  L+G+ +S
Sbjct: 340 GVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 399

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            I+CG WHTA+V+SAG LFTFGDG+FG LGHGD  + +IP+EVE+L+GL+T R +CG+WH
Sbjct: 400 SIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWH 459

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAAVV      SS+ S S+  GKLFTWGDGDK RLGHGDKE +L P CVA L+D N  QV
Sbjct: 460 TAAVVEVIVGYSSATSCSS--GKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQV 517

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+VALTTSG V+TMGS  YGQLG P ADG VP  VDGE+A +FVEE+ CGA+HVA
Sbjct: 518 ACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVA 577

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           AL+S +++YTWGKGANG+LGHGD ++R +PTLV+ L+DKQVK V CG +FTA+ICLHK V
Sbjct: 578 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPV 637

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D SVCS C   FGF RKRHNCYNCGL +C +CSS+K+ +A+LAP+ +K YRVC+ C 
Sbjct: 638 SDADQSVCSGCKQAFGFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCL 697

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
            KL+++ ++                    V  K+ +  D                     
Sbjct: 698 AKLERSASE-------------------EVARKSRKYMDGR------------------- 719

Query: 715 KQTESRLSKQNLKLELQDNHVYPVNKNL-QMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
              E  L + +  +E++    Y  ++N       +    +I  A   +K  SA  S  R 
Sbjct: 720 ---ERPLIRASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAIPERKAVSAKPSPPR- 775

Query: 774 SSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERT 833
            S   +P S   +   +     D+ ++  +   QE++ L+ Q+  LTSK E  E EL R 
Sbjct: 776 -SATPTPTSAGLAPPGNGP---DELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRG 831

Query: 834 SKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +++++    +A +E  KC+ A EVIKSLTV+
Sbjct: 832 AQKVQEAVLLAGEETAKCRAAKEVIKSLTVE 862


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/923 (48%), Positives = 581/923 (62%), Gaps = 84/923 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIWYSG EE++L L+ VSRII GQRT  F RYPRPEKE QSFSLI+   +RSLDL   DK
Sbjct: 50  LIWYSGGEEKRLWLSTVSRIITGQRTPVFLRYPRPEKECQSFSLIHANEERSLDL---DK 106

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTI--NCSTSSDSPRARIRKTSPTVTPFDFGDIQGT 117
           DEAEVW VGLKA +      K KL T+  + S  + SP A  R +SP  +P  FG     
Sbjct: 107 DEAEVWFVGLKASVAGAQLRKSKLHTLRHDGSVENISP-AVTRHSSPLTSP--FG----- 158

Query: 118 QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDR------- 170
                  S + L +   D    +    +  R++      S L+     N+ D        
Sbjct: 159 -------STDNLNQESGDFFKNSSFIGSPLRSEKGYLGGS-LSTVETKNNYDAGSVGGSM 210

Query: 171 --------------------SSAAETFRISLSSVVSSSSHGSAH-ED----FDSLGDVFI 205
                               +  ++ +RIS+SS VSSSS  S H ED     ++LGDV++
Sbjct: 211 HSGSSSMGSDSVSAQLRLVGAGQSDNYRISMSSAVSSSSQSSQHGEDGSHHAEALGDVYM 270

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEI 265
           WGEG+ +G LGGG  R+G   +   DA LPKA+ES + LDV  +ACG +HA LVTKQGE+
Sbjct: 271 WGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACGGKHAALVTKQGEV 330

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           F+WGEESGGRLGHG + DVSHPQL+E L+    E+VACGEYH CAVT SGDLYTWGDGT+
Sbjct: 331 FTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTH 390

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
           + GLLGHG+ +S WIP++V+G L+ + ++ I+CG WHTAVVT+AG LFTFGDG+FG LGH
Sbjct: 391 SLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGH 450

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
            D  S   PREVE+L+GLRT R +CGVWHTAAVV     SSS+   S S GKLFTWGDGD
Sbjct: 451 NDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSA--SSCSSGKLFTWGDGD 508

Query: 446 KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
           KGRLGHGDKE RL P CVA L+D N  +VACGH L+VALTT G V+TMGS+ +GQLG P 
Sbjct: 509 KGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQ 568

Query: 506 ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
           ADG +P  V+G + +++VE++ACGA+HVA +T  S+VYTWGKGANG+LGHGD+++RN+PT
Sbjct: 569 ADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPT 628

Query: 566 LVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVF 625
           LV+ LK+KQVK + CG  FTA +CLHKW+S  D + CS C  PF F RKRHNCYNCGLVF
Sbjct: 629 LVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQPFSFTRKRHNCYNCGLVF 688

Query: 626 CKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSP-RNRTGNV 684
           C ACSS+K+LKA+LAP+  KPYRVCD C  KL+K            S   +P RNR   V
Sbjct: 689 CHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAGASLSKRGAPSRNRGMEV 748

Query: 685 NHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLS-KQNLKLELQDNHVYPVNKNLQ 743
              + +   R  + P+  +      + +  K  E +L  K+  K E   + V PV     
Sbjct: 749 KEGSGKGEFRVPR-PQAPNAGRPPITLEFGKAGEGKLGMKRGKKPENSSSRVSPVPNGTS 807

Query: 744 MGRIYSPKSSIFLAKSSKKKF----------SASASSSRMSSLATSPVSGKSSSARSSA- 792
            G  +   S    A  SK  F          S+S  S R  S A SP+S ++S  RS+  
Sbjct: 808 GGSTWGAVS--VPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAVSPLSRRTSPPRSTTP 865

Query: 793 -----------VTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVT 841
                        ++D K+ ND+L+ E I+LR+QVE L  + ++ E E++R+++QL+   
Sbjct: 866 TPTGSGLAIPKTVVEDLKKTNDTLSDENIQLRSQVESLARQLQNYEKEIQRSAQQLQNAI 925

Query: 842 AIAEDEAEKCKTANEVIKSLTVQ 864
           A+A +EA K + A EVIKSLT Q
Sbjct: 926 ALATEEAAKSRAAKEVIKSLTSQ 948


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/894 (48%), Positives = 571/894 (63%), Gaps = 85/894 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   E+ LKL  VSRIIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISTTGEKSLKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAE+W+ GLKALI  G                D  R++I   S      D G  Q    
Sbjct: 110 VEAEIWIAGLKALIGSG----------------DGGRSKIDGWS------DGGLYQDDNS 147

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNS--------RADSVSFSPSPLTNAFPDNSNDRS 171
            L + S +    + A  IS  E   T S        R+++ + S  P+      N   + 
Sbjct: 148 DLTSSSPSDSYNSVARDISSPEVCTTFSPNKSPTSVRSENSTRSHVPINQT---NMQAKG 204

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           S+++ FR+S+SS  SSSSHGS  +D D+LGD+F+WGE I++ F+  G  R   + S +TD
Sbjct: 205 SSSDIFRVSVSSAPSSSSHGSTPDDCDALGDIFVWGEVISDNFMKPGADRAS-NVSSRTD 263

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            LLPK +ES + LD  +IACG RH+ +VT+QGE+F+WGEE+GGRLG G   DV+ P+L+E
Sbjct: 264 VLLPKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVE 323

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L+   V+LVACGE+HTCAVT  G+LYTWGDG +N+GLLG+G+ VS W+P+++SG L+G+
Sbjct: 324 ALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGL 383

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            ++Y++CG WHTA+++S G LFTFGDG+FG LGHGD  S S PREV++L GLRT  V+CG
Sbjct: 384 QVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACG 443

Query: 412 VWHTAAVV--VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           VWHTAAVV  + T SS+S PSG     KLFTWGDGDK RLGHGDKEPRL P CV  LID 
Sbjct: 444 VWHTAAVVEVIMTQSSTSIPSG-----KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 498

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           N  ++ACGH +++ LTTSG V+T+GS+ YGQLG P ADG  P  V+ ++     EEVACG
Sbjct: 499 NFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEEVACG 558

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           AYHV  LTS ++VYTWGKGANG+LGHGD ++R SPTLV+ LKDK VK + CG N++A IC
Sbjct: 559 AYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAIC 618

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHK +S  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+L+AALAP+  K YRV
Sbjct: 619 LHKSLSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRV 678

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD C+ KL K     +  S Y       +N    ++ +  +  D+    P      + LS
Sbjct: 679 CDSCYAKLSKVS---ESGSNYR------KNAVPRLSGENRDKLDKSDTRP----PKTALS 725

Query: 710 SFDSNKQTESRLSKQNLK---------------LELQDNHVYPVNKNLQMGRIYSPKSSI 754
           + D  KQ +S+ +KQ  +               L+L+D    P+   + + R+ +PK  I
Sbjct: 726 NMDLIKQLDSKAAKQGKRTDTFAVVRPTQAHSLLQLKDG---PIPNTVDIRRL-APK-PI 780

Query: 755 FLAKSSKKKFSASASSSRMSSLATSPVSG---KSSSARSSAVTIDDS-KQMNDSLNQEII 810
            +A         S S S +S  ++ P SG    ++S  S +  I DS K+ N+ LNQE++
Sbjct: 781 PMANGVN-----SRSVSPLSRRSSPPRSGTPVPTASGLSFSKGIADSLKKTNELLNQEVL 835

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LRAQVE L  + E  E EL ++ K+ +   A+A +E+ K K A EVI SLT Q
Sbjct: 836 MLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESAKSKAAKEVITSLTAQ 889


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/885 (47%), Positives = 544/885 (61%), Gaps = 74/885 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S  EE+ L L+ VSRIIPGQRTA F+R+ RPEK+Y SFSL+YN  +R+LDLICKDK
Sbjct: 50  LIWLSRGEEKILNLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLLYNNGERTLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPF----DF---G 112
            EAEVWL GLKALI R                      R R+T   ++      DF   G
Sbjct: 110 VEAEVWLAGLKALIGRN---------------------RGRRTRSDISDLTDGGDFLQNG 148

Query: 113 DIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSS 172
            I G  + L +  N G  +   D+     + N+ S +D+ S            N   R+S
Sbjct: 149 RISGATLDLSSSINRG--RVSIDLGPRDTSLNSAS-SDAASERA---------NMQLRTS 196

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
             + FRIS+SS  S SS GS  +D +SLGDV++WGE  ++     G      S   + D 
Sbjct: 197 GGDGFRISVSSTPSCSSGGSGPDDIESLGDVYLWGEVWSDAVFPDGSMS---SVPIKNDV 253

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L PK +ES + LDV  IACG RH  LVT+QGE+F+WGEESGGRLGHG E D S P+L+E 
Sbjct: 254 LTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEF 313

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+  NV+ VACGEYHTCAVT SGDLYTWGDGT N+GLLG G+ VS WIP++VSG L+G+ 
Sbjct: 314 LAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQ 373

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  I+CG WH+A+ TS G LFTFGDG+FG LGHGD  S S P+EV+ L GL+T +V+CGV
Sbjct: 374 VFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGV 433

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAA+V     S ++     S  KLFTWGDGDK RLGHG K+  L P CV+ LID N  
Sbjct: 434 WHTAAIVEVMSQSGAN----VSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           Q+ACG  L+VALTTSGHV+TMG  A+GQLG P +DG +PT V   +   FVEEV+CGA+H
Sbjct: 490 QIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKMPTLVQDSLVGEFVEEVSCGAHH 549

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           VA LTS S++YTWGKGANG+LGHGD ++R +PTLV+ LKD+ VK + CG NFT  IC+HK
Sbjct: 550 VAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHK 609

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
           WVS  D SVCS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD 
Sbjct: 610 WVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDA 669

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
           C+ KLK +DT      G  ++     NR      ++ ++ ++  +G     +     S +
Sbjct: 670 CYAKLKTSDT------GNYNI-----NRKATTPRRSIDIREKMDRGEANTSRTLFSPSTE 718

Query: 713 SNKQTESRLSKQNLKLELQD-NHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSS 771
             K  E +  +  ++ E         V   LQ+  I  P SS+   +++ K  S+  S S
Sbjct: 719 PIKYLEIKSVRPGMRSEAPSIVRASQVPNLLQLKDIAFP-SSLSAIQNAWKPVSSPVSLS 777

Query: 772 RM-------SSLATSPVSGKSSSARSSAV-----TIDDSKQMNDSLNQEIIKLRAQVEEL 819
            +       +S   SP S + S  R S+       ID  K+ N+ L  ++ K++ Q++  
Sbjct: 778 PLNSPQPMGNSRPASPYSRRPSPPRISSPGFSRSVIDSLKKTNEILKNDMTKVQNQMKTF 837

Query: 820 TSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             K +  E E+++  K+       A+ EA KC+ A E++KSL  Q
Sbjct: 838 KQKCDAQETEIQKLQKEANETALSAKREASKCRVAKELVKSLAEQ 882


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/978 (44%), Positives = 574/978 (58%), Gaps = 160/978 (16%)

Query: 2    LIWYSGKEERQLKLNQVSRIIPGQRT---------------------------------- 27
            L W+S  EER LKL+ VS+IIPGQRT                                  
Sbjct: 78   LFWFSSSEERSLKLSSVSKIIPGQRTGMGRKSLGGDGKEKLRRGREGKEGKGRKGREKGG 137

Query: 28   -ATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWLVGLKALITRGTHSK---- 80
             A FQR+PRPEK+Y SFSLIYN   RSLDLICKDK EAEVW+ GL ALI+ G   +    
Sbjct: 138  KAVFQRFPRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLGALISSGQGGRSKID 197

Query: 81   -WKLGTINC----STSSDSP-RARIRKTSPTVTPFDFGDIQGTQVPLDNVSNNGLGKAFA 134
             W  G +      + +S+SP  + +R +    +P    DI  +   + NVS     K+F 
Sbjct: 198  GWCDGGLYLDDGKNLTSNSPSESSVRASQDISSP----DISAS---IPNVSP----KSFH 246

Query: 135  DIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAH 194
                           ++V+F  S      P N   + S+++ FR+S+SS  S+SSHGSA 
Sbjct: 247  P-------------ENTVNFEKSHAPANSP-NMQVKGSSSDVFRVSVSSAPSTSSHGSAP 292

Query: 195  EDFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
            +D+D+LGDV+IWGE I+   +  G +  V Y   R TD LLPK +ES + LDV  IACG 
Sbjct: 293  DDYDALGDVYIWGEVISENVVKVGADKNVSYCSPR-TDILLPKPLESNVVLDVLQIACGV 351

Query: 254  RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
            +HA LVT+QGE+F+WGEESGGRLGHG   +V  P L+E L+   V+ VACGE+HTCAVT 
Sbjct: 352  KHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTM 411

Query: 314  SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            +G++YTWGDGT+N+GLLGHG+ VS WIP++++G L+G+ +++++CG WHTA++TS G LF
Sbjct: 412  AGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLF 471

Query: 374  TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
            TFGDG+FG LGHGD  + S PREVE+L GLRT  V+CGVWHTAA+V    + SS+   S 
Sbjct: 472  TFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSA---SI 528

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            S GKLFTWGDGDK RLGHGDK+ RL P C++ LID N  ++ACGH L+V LTTSG V+TM
Sbjct: 529  SSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTM 588

Query: 494  GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            GS  YGQLG P +DG +P  V+ ++A   VEE+ACGAYHV  LTS ++VYTWGKGANG+L
Sbjct: 589  GSTVYGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRL 648

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            GHGD ++R +PTLV+ LKD+ VK + CG N++A ICLHKWVS  + S CS+C   FGF R
Sbjct: 649  GHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTR 708

Query: 614  KRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSV 673
            KRHNCYNCGLV C +CSSRK+L+AALAP+  K YRVCD C+ KL K              
Sbjct: 709  KRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDTCYVKLNKV------------A 756

Query: 674  VQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQD- 732
              S  NR   +     E  DR  +      + ++ S+ D  KQ +S+ +KQ  K ++   
Sbjct: 757  ESSINNRRNAMPRFPGENKDRLEKSELRLSKPAVPSNMDLIKQLDSKAAKQGKKADMFSL 816

Query: 733  NHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSS- 791
             H       LQ+  +    +        +   + S  +SR    + SP S +SS  RS+ 
Sbjct: 817  AHTTQAPSLLQLKDVVLSTAMDLKRTVPRPVITPSGVNSR----SVSPFSRRSSPPRSAT 872

Query: 792  ----------AVTIDDS-KQMNDSLNQEIIKLRAQV------------------------ 816
                      + +I DS K+ ND LNQE++KLR+QV                        
Sbjct: 873  PIPTTSGLAFSKSITDSLKKTNDLLNQEVLKLRSQVYYTSLISVVSIKLQNFSSILNFFS 932

Query: 817  ------EELT------------------------SKSEHLEAELERTSKQLKTVTAIAED 846
                  EE+                          + E  E EL++++K+ +    +A +
Sbjct: 933  VMFESEEEIVGQILEKLDEERIEKKNEARVETLRQRCELQELELKKSAKKTQEAMVLATE 992

Query: 847  EAEKCKTANEVIKSLTVQ 864
            E+ K K A EVIKSLT Q
Sbjct: 993  ESAKSKAAKEVIKSLTAQ 1010


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/880 (45%), Positives = 541/880 (61%), Gaps = 67/880 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S  +E+ LKL+ V RIIPGQRTA F+RY RPEK+Y SFSL+YN  +RSLDLICKDK
Sbjct: 50  LIWLSHGQEKNLKLSSVLRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVWL GLKALI +  +                     R+T   ++ F   D +  Q 
Sbjct: 110 VEAEVWLAGLKALIGKNHN---------------------RRTRSNISDFQLTDGELYQN 148

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND-----RSSAA 174
                     G+ F   + +T +      +  +    +PL     D S       R+S  
Sbjct: 149 ----------GRPFGATLEFTSSLARGRVSIDLGSRDNPLDLRSSDVSERSSMQLRASTG 198

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
             FRIS+SS  S SS GS  +D +SLGDV+IWGE  ++G    G      S   + D L 
Sbjct: 199 GDFRISVSSTPSCSSAGSGPDDIESLGDVYIWGEIWSDGVFPDGSVS---SVPTKNDVLT 255

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDVH I+CG RH  LVT+QGE+F+WGEESGGRLGHG E   +HP+L+E L+
Sbjct: 256 PKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLA 315

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N++ VACGEYHTCA++ SGDL+TWGDG+ NSGLLGHG+ VS WIP++VSG L+G+ + 
Sbjct: 316 VTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVL 375

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            I+CG WH+A+ TS G LFTFGDG+FGALGHGD  S S P+E+++L GL+T +V+CGVWH
Sbjct: 376 SIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWH 435

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA+V     S S+     S  KLFTWGDGDK RLGHG+K+  L P CV+ LID N  Q+
Sbjct: 436 TAAIVEVMSQSGSN----ISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQL 491

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH ++VALTTSGHV+TMG +AYGQLG P ++G +P  V   +   FVEE++CGAYH A
Sbjct: 492 ACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTA 551

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWG+GANGQLGHGD ++R  PTLV+ LK++ VK + CG NFT+ IC+HKWV
Sbjct: 552 VLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWV 611

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D SVCS C   FGF RKRHNCYNCGLV C  CSS+K++KAALAP+  KP+RVCD C+
Sbjct: 612 SGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCY 671

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
            KLK  +      SG TS +    NR   V  ++ ++ ++  +G     ++ +  + +  
Sbjct: 672 AKLKAAE------SGNTSAI----NRKTTVPRRSMDIREKMERGEPRFSRILLSPTTEPI 721

Query: 715 KQTESRLSKQNLKLELQD-NHVYPVNKNLQMGRIYSPKSSIFLAKSSK------KKFSAS 767
           K  E +  KQ  + E         V   L +  +  P S   L  + K       + + +
Sbjct: 722 KYLEIKSGKQGAQSEAASIVRASQVPSLLPLKDVAFPSSPSTLQNAWKPAPPIVPQLTVN 781

Query: 768 ASSSRMSSLATSPVSGKSSSARSSAV-----TIDDSKQMNDSLNQEIIKLRAQVEELTSK 822
           +S    +S  +SP S + S  RS++       ID  K+ N+   Q++ K++ Q++ L  K
Sbjct: 782 SSQPAANSRPSSPYSRRPSPPRSASPGFSRGVIDSLKKTNEIFKQDMTKMQNQIKTLKKK 841

Query: 823 SEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
            ++ E E+     + K    +A  E+ K   A E  KS+T
Sbjct: 842 CDNQELEIHNLENRAKGAAKLAAAESSKSNIAMEFAKSIT 881


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/879 (46%), Positives = 542/879 (61%), Gaps = 71/879 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S K+ER LKL+ VSRIIPGQRT  F+RY +PEK+Y SFSL+YN  +R+LDLICKDK
Sbjct: 50  LIWISHKKERTLKLSSVSRIIPGQRTVVFRRYLQPEKDYLSFSLVYNNGERTLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVW  GLKALI+ G HS+         T S+S                    +G   
Sbjct: 110 AEAEVWFAGLKALISTGRHSRL--------TRSES------------------SYEG--- 140

Query: 120 PLDNVSNNGLGKAFADIISY-TEAANTNSRADSVSFSPSPLTNAFPD------NSNDRSS 172
            +D + N   G+ F  ++   T  A      DS+    S L  A PD      N   R+S
Sbjct: 141 -VDIIPN---GRPFGAVLEISTSIARGRVSTDSLPCESS-LYFANPDVGLDRTNMQGRTS 195

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
             + FRIS+SS  S SS GS  +D +SLGDV+IWGE  A+     G    G  F   TD 
Sbjct: 196 VGDGFRISVSSTPSVSSLGSGPDDIESLGDVYIWGEVWADAVAPDGN---GTQFPSTTDV 252

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L+PK +ES++ LDVH IA G RH  LVT+QGE+F+WGEESGGRLGHG + D   PQL+E 
Sbjct: 253 LVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEF 312

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+  NVE VACGE HTCAV+ S +L++WGDG YN GLLGHG+ VS W+P++++G L+G+ 
Sbjct: 313 LAVTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQ 372

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  I+CG WH+A+ TS G LFTFGDG+FG LGHG+  S + P+EV+ L GL+T  V+CGV
Sbjct: 373 VISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGV 432

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAA+V  T  S S+     S  KLFTWGDGDK RLGHG+KE  L P CV+ LI+ N  
Sbjct: 433 WHTAAIVEVTFQSGSN----VSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH 488

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           Q+ACGH +++ALTTSGH++TMG   +GQLG  ++DG +P  V   +   FVEE++CGA+H
Sbjct: 489 QIACGHTMTIALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHH 548

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           VAALTS S++YTWGKGANG+LGHGD D+R SPTLV+ LK++ VK + CG +FT+ IC+HK
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHK 608

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
           WVS VD S C+ C  PFGF RKRHNCYNCGLV C  CSSRK +KAALAP+  KP+RVCD 
Sbjct: 609 WVSGVDQSTCTGCRQPFGFTRKRHNCYNCGLVHCHGCSSRKVMKAALAPTPGKPHRVCDS 668

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSF- 711
           C+TKLK  +            +  PR+        + +  DR  QG  ++    +   F 
Sbjct: 669 CYTKLKAVEANAASNLNRKVTITQPRS--------SIDGRDRYGQGETVRSTKILFPPFS 720

Query: 712 DSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSAS-ASS 770
           +  K  E R +K      L  + +  +    QM  +  P S+  +    K   + +  S+
Sbjct: 721 EPLKYLEMRTNKLGNSSMLPTSQIPSI---AQMKDMSFPSSTSSIQNGLKYPLAPNPPST 777

Query: 771 SRMSSLATSPVSGKSSSARS-----SAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEH 825
             +++ + SP + + S  RS     S   ID  K+ N+ LNQ++ KL+ Q   L  KS  
Sbjct: 778 PPLNARSVSPYARRPSPPRSSSPGFSRSIIDSMKKTNELLNQQVSKLQNQNRSLKQKS-- 835

Query: 826 LEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
              E+++  K +K  T++A +E+ K K   E   S+  Q
Sbjct: 836 -TMEIQKLHKNIKDATSLAAEESSKHKATKEYFGSMIAQ 873


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/888 (46%), Positives = 543/888 (61%), Gaps = 91/888 (10%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   E++LKL+ VSRIIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 120 LIWISSGGEKKLKLSSVSRIIPGQRTAVFQRYLRPEKDYVSFSLIYNNGKRSLDLICKDK 179

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EA+VW+ GLK LI+ G   +     W  G +N   S D        +S + +       
Sbjct: 180 VEADVWISGLKKLISSGQGGRSKIDGWSDGGLNLDDSKDLTSNSPSGSSASAS------- 232

Query: 115 QGTQVPLDNVSNNGLGKAFADI-ISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSA 173
                         L  +  DI +S    +  + R D+   S      +   N   + S 
Sbjct: 233 --------------LDISSPDISVSLPSTSPNSYRPDNTLNSERSHARSESTNMQIKGSG 278

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
            +T R+S+SS  ++SSHGSA +D+D+L DV+IWGE I      G +  V   F  + D L
Sbjct: 279 TDTVRVSVSS--ATSSHGSAPDDYDALADVYIWGEIICENIKVGADKSV--HFCPRADVL 334

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           LP+ +ES + LDV +IACG RHA LVT+QGE+F+WGEESGGRLGHG   +V  P+L+E L
Sbjct: 335 LPRPLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEAL 394

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   V+ VACGE+H+CAVT +G+LYTWGDGT+N+GLLGHGS  S WIP+++ G LDG+ +
Sbjct: 395 TSTTVDFVACGEFHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQV 454

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           S+++CG WHTA++TS G                   + S PREV++L GLRT  V+CGVW
Sbjct: 455 SFVACGPWHTALITSTGKE-----------------NVSYPREVDSLLGLRTIAVACGVW 497

Query: 414 HTAAVV--VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           HTAAVV  +AT S +S      S GKLFTWGDGDK RLGHGDKE RL P CV  +ID + 
Sbjct: 498 HTAAVVEVIATQSIAS-----LSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDF 552

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            ++ACGH L+V LTT+G V+TMGS  YGQLG P +DG +P  V  +IA   VEE++CGAY
Sbjct: 553 KKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIALESVEEISCGAY 612

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           HVA LTS ++VYTWGKG+NG+LGHGD ++R +PTLV+ LKD+ VK + C  N++A ICLH
Sbjct: 613 HVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACASNYSAAICLH 672

Query: 592 KWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCD 651
           KWVS  + S CS+C   FGF RKRHNCYNCGLV C +CSS+K+L+AALAP+ +K YRVCD
Sbjct: 673 KWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALRAALAPNPDKHYRVCD 732

Query: 652 DCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSF 711
            C+ KL K                +  NR   +   + E  DR  +      +  I S+ 
Sbjct: 733 SCYAKLSKV------------AEANNSNRRNALPRLSGENKDRLDKSELRVSKALIPSNM 780

Query: 712 DSNKQTESRLSKQNLK---LELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
           D  KQ +++ +KQ  K     L  N   P+   LQ+  +    ++     + +   + S 
Sbjct: 781 DLIKQLDNKAAKQGKKSDTFSLARNSQTPL---LQLKDVVFATAADLRRTTPRPVIAPSG 837

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
            S+R    + SP S +SS  RS            S    D  K+ N+ LN+E+ KL AQV
Sbjct: 838 VSTR----SASPFSRRSSPPRSATPIPTMSGLSFSKNIADSLKKTNELLNKEVQKLHAQV 893

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           E L +K E  E E++R++K+ +   A+A +E+ KCK A +VIKSLT Q
Sbjct: 894 ESLKNKCERQELEVQRSAKKTQEAIALATEESTKCKAAKQVIKSLTAQ 941


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/932 (45%), Positives = 564/932 (60%), Gaps = 80/932 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WY GK+E++LKL+ V+RIIPGQRTA F+RYP+P KEYQSFSLIY +RSLDL   DKDE
Sbjct: 53  LLWYCGKKEKRLKLSSVTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDE 109

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRAR---------IRKTSPTVTPFDFG 112
           AE WL  L+AL++R   S   L + + S + ++             IR  S + T ++  
Sbjct: 110 AEFWLTTLRALLSRNNSSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVS-SDTSYEEH 168

Query: 113 DIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP--SPLTNAFPDNSNDR 170
             + +    +      LGK F++++S T      S  D +   P  SP        +N  
Sbjct: 169 AKKASGSHCNTPQR--LGKVFSEVLSQTAVLKALS-LDELVHKPHTSPPETIENRPTNHS 225

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
           S   +T + S+SS VSSSS GS  ED  SL DVF+WGE I +G LGGG H+ G S S  T
Sbjct: 226 SPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMT 285

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D+ LPK ++S +ALD  +I+CG  +AVLVTKQG+++SWGEESGGRLGHG  + V HP+LI
Sbjct: 286 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLI 345

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           +  +G  VEL  CGE+HTCAVT SGDLY WGDG +N+GLLG GS  S W P ++ G ++G
Sbjct: 346 DEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 405

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           I++  ISCG WHTA VTS G LFTFGDG+FGALGHGD IST+IPREVE L G RT + +C
Sbjct: 406 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAAC 465

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           GVWH+AAVV     ++SS       GKLFTWGDGD GRLGHGD E RL P CV  L   +
Sbjct: 466 GVWHSAAVVSVFGEATSS-------GKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTS 518

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACG 529
             QVACG  ++VAL+ SG VY MG+A       P  D +  P+ ++G + +SFV+EVACG
Sbjct: 519 FQQVACGQSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACG 572

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            +H+A L S ++VYTWGKG+NGQLGHGD + R  PTLV  LK KQV++VVCG N+TA IC
Sbjct: 573 FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATIC 632

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHK ++  D + CS C +PF + RK HNCYNCG VFC +C+S+KSL AA+AP  N+PYRV
Sbjct: 633 LHKPITGTDSTKCSGCRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRV 692

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CDDC+ KL+          G    + +P N     N       + +  G   Q QL  + 
Sbjct: 693 CDDCYIKLE----------GIRESLATPANSARFSNASLPSSYEMDEIGITPQRQLLRVD 742

Query: 710 SFDSNKQTE-------SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKK 762
           SFD  +QT+          S  +    +  N     + NL+  R  S  +S    +   K
Sbjct: 743 SFDFFRQTKHADLKTIGETSGGSCTSSIHSNMDIKGSFNLKGIRRLSRLTSFDSVQEEGK 802

Query: 763 KFSASASS------------------SRMSSLATSPVSGKSSSARSSAVTIDDS------ 798
           + +   +S                  SR  S+   P+S KSS   S A T D +      
Sbjct: 803 QRTKHCASKSDTSSLIRHSVTCGLPFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDH 862

Query: 799 -------KQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKC 851
                  K+ N  L+ EI  L+AQVEELT KS+ LE EL +TSK+L+    +A D+AEK 
Sbjct: 863 ELLQEVPKKSNQCLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKI 922

Query: 852 KTANEVIKSLTVQGLNSKVGLWNNQDRNRQAL 883
           K++ E+++SLT+Q +N+     +   R+R + 
Sbjct: 923 KSSEEIVRSLTLQLMNTTKKEVDKTRRHRNSF 954


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/932 (45%), Positives = 564/932 (60%), Gaps = 80/932 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WY GK+E++LKL+ V+RIIPGQRTA F+RYP+P KEYQSFSLIY +RSLDL   DKDE
Sbjct: 50  LLWYCGKKEKRLKLSSVTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDE 106

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRAR---------IRKTSPTVTPFDFG 112
           AE WL  L+AL++R   S   L + + S + ++             IR  S + T ++  
Sbjct: 107 AEFWLTTLRALLSRNNSSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVS-SDTSYEEH 165

Query: 113 DIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP--SPLTNAFPDNSNDR 170
             + +    +      LGK F++++S T      S  D +   P  SP        +N  
Sbjct: 166 AKKASGSHCNTPQR--LGKVFSEVLSQTAVLKALS-LDELVHKPHTSPPETIENRPTNHS 222

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
           S   +T + S+SS VSSSS GS  ED  SL DVF+WGE I +G LGGG H+ G S S  T
Sbjct: 223 SPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMT 282

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D+ LPK ++S +ALD  +I+CG  +AVLVTKQG+++SWGEESGGRLGHG  + V HP+LI
Sbjct: 283 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLI 342

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           +  +G  VEL  CGE+HTCAVT SGDLY WGDG +N+GLLG GS  S W P ++ G ++G
Sbjct: 343 DEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 402

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           I++  ISCG WHTA VTS G LFTFGDG+FGALGHGD IST+IPREVE L G RT + +C
Sbjct: 403 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAAC 462

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           GVWH+AAVV     ++SS       GKLFTWGDGD GRLGHGD E RL P CV  L   +
Sbjct: 463 GVWHSAAVVSVFGEATSS-------GKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTS 515

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACG 529
             QVACG  ++VAL+ SG VY MG+A       P  D +  P+ ++G + +SFV+EVACG
Sbjct: 516 FQQVACGQSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACG 569

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            +H+A L S ++VYTWGKG+NGQLGHGD + R  PTLV  LK KQV++VVCG N+TA IC
Sbjct: 570 FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATIC 629

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHK ++  D + CS C +PF + RK HNCYNCG VFC +C+S+KSL AA+AP  N+PYRV
Sbjct: 630 LHKPITGTDSTKCSGCRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRV 689

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CDDC+ KL+          G    + +P N     N       + +  G   Q QL  + 
Sbjct: 690 CDDCYIKLE----------GIRESLATPANSARFSNASLPSSYEMDEIGITPQRQLLRVD 739

Query: 710 SFDSNKQTE-------SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKK 762
           SFD  +QT+          S  +    +  N     + NL+  R  S  +S    +   K
Sbjct: 740 SFDFFRQTKHADLKTIGETSGGSCTSSIHSNMDIKGSFNLKGIRRLSRLTSFDSVQEEGK 799

Query: 763 KFSASASS------------------SRMSSLATSPVSGKSSSARSSAVTIDDS------ 798
           + +   +S                  SR  S+   P+S KSS   S A T D +      
Sbjct: 800 QRTKHCASKSDTSSLIRHSVTCGLPFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDH 859

Query: 799 -------KQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKC 851
                  K+ N  L+ EI  L+AQVEELT KS+ LE EL +TSK+L+    +A D+AEK 
Sbjct: 860 ELLQEVPKKSNQCLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKI 919

Query: 852 KTANEVIKSLTVQGLNSKVGLWNNQDRNRQAL 883
           K++ E+++SLT+Q +N+     +   R+R + 
Sbjct: 920 KSSEEIVRSLTLQLMNTTKKEVDKTRRHRNSF 951


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/932 (46%), Positives = 564/932 (60%), Gaps = 77/932 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WY GK+E++LKL+ V+RIIPGQRTA F+RYP+P KEYQSFSLIY +RSLDL   DKDE
Sbjct: 58  LLWYCGKKEKRLKLSSVTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDE 114

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPR------------ARIRKTSPTVTPF 109
           AE WL  L+AL++R   S   +  ++  + S +P             + IR  S + T +
Sbjct: 115 AEFWLTTLRALLSRNNSSSALV--LHSRSRSFAPENGEQSSTSKNSKSNIRSVS-SDTSY 171

Query: 110 DFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND 169
           +    + +    +      LGK F++++S T      S  + V    +    A  + S +
Sbjct: 172 EEHAKKASGSHCNTPQR--LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPEAIENRSTN 229

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
            S A +T + S+SS VSSSS GS  ED  SL DVF+WGE I +G LGGG H+ G S S  
Sbjct: 230 HSPAVDTSKYSVSSAVSSSSQGSCFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLM 289

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD+ LPK ++S +ALD  +I+CG  +AVLVTKQG+++SWGEESGGRLGHG  + V HP+L
Sbjct: 290 TDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKL 349

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+   G  VEL  CGE+HTCAVT SGDLY WGDG +N+GLLG GS  S W P ++ G ++
Sbjct: 350 IDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQME 409

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GI++  ISCG WHTA VTSAG LFTFGDG+FGALGHGD IST+IPREVE L G RT R +
Sbjct: 410 GINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTA 469

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWH+AAVV     +SSS       GKLFTWGDGD G+LGHGD   RL P  V  L   
Sbjct: 470 CGVWHSAAVVSVFGEASSS-------GKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTT 522

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  QVACG  ++VAL+ SG VY MG+A   Q  V  A    P+ ++G + +SFV+EVACG
Sbjct: 523 SFQQVACGQSITVALSMSGQVYAMGTADPSQDDVVRA----PSCIEGGLGKSFVQEVACG 578

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            +H+A L S ++VYTWGKG+NGQLGHGD + R  PTLV  LK KQV++VVCG N+TA IC
Sbjct: 579 YHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATIC 638

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHK ++  D S CS C +PF + RK HNCYNCG VFC +C+S+KSL AA+AP  N+PYRV
Sbjct: 639 LHKPITGTDSSRCSGCRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRV 698

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CDDC+ KL+     L       +   S R    ++   + E+ D     P+ Q  L  + 
Sbjct: 699 CDDCYIKLEGIRESLG------TPANSARFSNASLPSSSNEM-DEIGTTPQRQ-LLHRVD 750

Query: 710 SFDSNKQTE-------SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKK 762
           SFD  +QT+          S  +       N     + NL+  R  S  +S    K   K
Sbjct: 751 SFDFFRQTKIPDLKTIGETSGTSCTSSTHSNMDIKGSFNLKGIRRLSRLTSFDSVKEEGK 810

Query: 763 KFSASASS------------------SRMSSLATSPVSGKSSSARSSAVTIDDS------ 798
           + S   +S                  SR  S+   P+S KSS   S A T D +      
Sbjct: 811 QRSKHCASKSDTSSLIRHSVTCGLPFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDH 870

Query: 799 -------KQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKC 851
                  K+ N  L+ EI  L+AQVEELT KS+ LEAEL  TSK+L+    +A D+AEK 
Sbjct: 871 DLLQEVPKKSNQCLSHEISVLKAQVEELTLKSKKLEAELGMTSKKLEVAVLMARDDAEKI 930

Query: 852 KTANEVIKSLTVQGLNSKVGLWNNQDRNRQAL 883
           K++ E+++SLT+Q +N+     +   R R + 
Sbjct: 931 KSSEEIVRSLTLQLMNATKKEVDKTRRRRNSF 962


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/774 (54%), Positives = 520/774 (67%), Gaps = 61/774 (7%)

Query: 110 DFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN- 168
           D  D    + P  +   NGL KAF+D++ Y         +DS + S   +++   DN+N 
Sbjct: 71  DGSDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMSSGQSDNTNG 130

Query: 169 -DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
             R    + FR+S SS VSSSSHGS H+D D+LGDVFIWGEG   G LGGG  RVG S  
Sbjct: 131 HSRGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSG 190

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
            + D L+PK +E  + LDV NI+CG RHA LVTKQ                         
Sbjct: 191 AKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQA------------------------ 226

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           +LI+ LS +N+ELVACGEYHTCAVT SGDLYTWGDGT+  GLLGHG+ VS W+P+ V+G 
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP 286

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L+GIH+S ISCG WHTA+VTSAG LFTFGDGSFG LGHGD  S S+PREVE+L+GLRT R
Sbjct: 287 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVR 346

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            +CGVWHTAAVV     +S+S   + S GK+FTWGDGDKGRLGHGDKEP+L P CVA L+
Sbjct: 347 AACGVWHTAAVVEVMSVNSNS--SNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALV 404

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           + N CQVACGH L+VALTTSGHVYTMGSA YGQLG   ADG++P RV+G++ ++FVEE++
Sbjct: 405 EPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEIS 464

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CGAYHVA LTS ++VYTWGKGANG+LGHGD +++N+PTLV+ LKDKQV+ VVCG+NFTA 
Sbjct: 465 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAA 524

Query: 588 ICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPY 647
           IC+HKWVS VD S+CS C  PF  RRKRHNCYNC LVFC +CSS+KSLKA+LAP+ NKPY
Sbjct: 525 ICIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNGNKPY 584

Query: 648 RVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSI 707
           RVCD C++KL         T G  + +     R   V   +  +   E    R   QLS 
Sbjct: 585 RVCDTCYSKL---------TKGLETDMHFSAKRAATVPGFSDTI--EEDLETRSNAQLSR 633

Query: 708 LSSFDSNKQTESRLSKQNLKLELQDNHVYPVNK------NLQMGRIYSPKSSIFLAKSSK 761
           LSS +S K  +SR SK+N K E     V PV         L + R ++P   +F   SSK
Sbjct: 634 LSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNP---VF--GSSK 688

Query: 762 KKFSASASSSRMSSLATSPVSGKSSSAR-----------SSAVTIDDSKQMNDSLNQEII 810
           K FSAS   SR+ S ATSP+S ++S  R           +S     D K  ND+L+QE++
Sbjct: 689 KFFSASVPGSRIVSRATSPISRRTSPPRSTTPTPTLGGLTSPRVPTDGKPTNDALSQEVL 748

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            LR+QVE LT KS+ LE ELERT+KQLK   +IA +E  KCK A EVIKSLT Q
Sbjct: 749 NLRSQVESLTRKSQLLELELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQ 802


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/879 (45%), Positives = 536/879 (60%), Gaps = 65/879 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYS  EER LKL+ +SRIIPGQRTA F+RY RPEK+Y SFSL+Y   +RSLDLICKDK
Sbjct: 50  LIWYSHGEERTLKLSSISRIIPGQRTAVFRRYLRPEKDYLSFSLLYRNGERSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVW +GLK LI+   H                   R R         DF D+Q    
Sbjct: 110 GEAEVWFLGLKNLISPRQH-----------------HGRSRS--------DFSDVQDANE 144

Query: 120 PLDNVSNNGLGKAFADIISY-TEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
              +    G    F++ ++   ++ + NSR   +    S + +    N   R+S  + FR
Sbjct: 145 FFQSSRPFGATLEFSNSLARGRDSIDLNSRESHLHLVSSDVGSERA-NMQLRTSGGDGFR 203

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
            S+SS  S SS GS  +D +SLGDV++WGE   +  L  G          + D L PK +
Sbjct: 204 SSVSSTPSCSSGGSGPDDIESLGDVYVWGEIWTDLVLPDG---TSSQIPVKNDVLTPKPL 260

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           E+ + LDV  IACG RH  LVT+QGE+F+WGEE GGRLGHG + D S P L+E L+  +V
Sbjct: 261 ETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHV 320

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + VACGEYHTCA+T S DLYTWGDG +NSG+LGHG+ +S WIP++V G+L+G+ +  ++C
Sbjct: 321 DFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVAC 380

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+ TS G L+TFGDG++G LGHGD  S   PREV+ L GLRT +V+CGVWHTAA+
Sbjct: 381 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 440

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V     + S+     S  KLFTWGDGDK RLGHG+KE  L P CV+ LID N  Q+ACGH
Sbjct: 441 VEVMSQTGSN----MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGH 496

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           +++VALTTSGHV+TMG  AYGQLG P +DG++P  V   +   FVEE++CGAYH   LTS
Sbjct: 497 NMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTS 556

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            ++V++WG+G+NG+LGHGD ++R +PTL++ LKD+ VK + CG NFTA IC+HKWVS  D
Sbjct: 557 RNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGAD 616

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVC+ C   FGF RKRHNCYNCGLV C +CSS+K+LKAALAP+  KP+RVCD C+ KLK
Sbjct: 617 QSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLK 676

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
             +      +G    V    NR    N ++ +  +R  +G     ++ +  + +  K  E
Sbjct: 677 SAE------AGNNFCV----NRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHE 726

Query: 719 -------SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSS 771
                  SR +  ++    Q      V    Q+  I  P S   +  + +    A  S  
Sbjct: 727 IKSVRPGSRPTSPSMVRASQ------VPSLQQLKDIAFPSSLSAIQNALRPALVAPPSPP 780

Query: 772 RM-SSLATSPVSGKSSSARS-----SAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEH 825
            M +S   SP + + S  RS     S   ID  K+ N++L Q+  KL+ +V+ L  K + 
Sbjct: 781 PMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDI 840

Query: 826 LEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             AE++   K      ++ E+E+ KCK A +++ ++T Q
Sbjct: 841 QGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITEQ 879


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/872 (47%), Positives = 541/872 (62%), Gaps = 66/872 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           L+W S  +++ LKL  VSRI+ GQRT  FQR+  PEK++ SFSLIYND  RSLDLICK+K
Sbjct: 43  LVWVSNNKDKSLKLASVSRILSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKNK 102

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAE W  GL ALI RG H               S    I        PFD     G + 
Sbjct: 103 VEAEAWFTGLSALICRGQHG--------------SQVQHIDGIRIAGLPFD-----GARE 143

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
              + S+     +F + +S   + N++    S  ++ S  T+    +   +S ++   RI
Sbjct: 144 SSLSGSSTFTSDSFENKLS---SVNSSKDRSSGEYTYSERTDV--SDMQVKSVSSSDIRI 198

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +S+SSHGS  ED +S GD+++WGE I +     G  R  YS    TD L+PK +E
Sbjct: 199 SVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLE 258

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV  +ACG +HA LVT+Q E+F+WGEE  GRLGHG   +V  P+L+E LS  NVE
Sbjct: 259 SNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVE 318

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           L+ACGE+HTCAVT +GDLYTWGDGT+N+GLLGHGS VS WIP++VSG LDG+ +S +SCG
Sbjct: 319 LIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCG 378

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WHTA++TS+G L+TFGDG+FG LGHG+  S S P+EVE+L+GLRT  VSCGVWHTAAVV
Sbjct: 379 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVV 438

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               S S++     S GKLFTWGDGDK RLGHGD+  +L P CV  LID N  + ACGH 
Sbjct: 439 EVIISQSNA-----SSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHT 493

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           L++ LTTSGH++T+GS  YGQLG P  DG  P  V+ ++    V EVACG+YHVA LT+ 
Sbjct: 494 LTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNA 553

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
            +VYTWGKG NG+LGHGD  +R  PTLV+ LKD+ VKRV CG +FTA IC HKWVS ++ 
Sbjct: 554 GEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQHKWVSGMEQ 613

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           S CS+C  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ KL K
Sbjct: 614 SQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVKLSK 673

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKT-AELADREAQGPRLQDQLSILSSFDSNKQTE 718
                       S V   RN    +   T AE  D +A       +++  +S D  +  +
Sbjct: 674 V---------LDSGVSYSRNTIPRLPGDTKAERIDTKAT------RVAQSNSSDMIRNLD 718

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASS------SR 772
            + +KQ  K E        V   LQ+      K   F++    +  S  A+       S 
Sbjct: 719 VKAAKQTKKSEYSSQ----VPATLQL------KDIPFISAPDLQNLSTVANQYPYDPRST 768

Query: 773 MSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELER 832
           + SL    ++  SS +  S+ ++ D+   N+ L QE+ KL+A+V  L  + E  +AEL++
Sbjct: 769 LPSLRMPYLNYSSSMSSESSESLKDA---NELLKQEVQKLQAEVNSLRQEREQQDAELQK 825

Query: 833 TSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
              + +    +A +EA K KTA +VI SLT Q
Sbjct: 826 ADAKAREAMNLATEEASKLKTAKDVINSLTAQ 857


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/870 (45%), Positives = 539/870 (61%), Gaps = 66/870 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           L W S  EE+ LKL  VSRI+PGQRTA F+RY RPEK+Y SFSLIY+  DRSLDLICKDK
Sbjct: 55  LFWLSHGEEKGLKLATVSRILPGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDK 114

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTS------PTVTPFDFGD 113
            E EVW  GLK+LI +  + + K         S+ P   I  +       P+    DF  
Sbjct: 115 AETEVWFAGLKSLIRQNRNKQAK---------SEIPEVSIHDSDCFSTGRPSTASIDFAP 165

Query: 114 IQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPL--TNAFPDNSNDRS 171
                      +N   G+   D+               +  SP+    ++   +  N   
Sbjct: 166 -----------NNTRRGRTSIDL--------------GIQNSPTKFGSSDVGYERGNMLR 200

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
            + + FRIS+SS  S S+  S  +D +SLGDV++WGE  ++G    G   V  S + + D
Sbjct: 201 PSTDGFRISVSSTPSCSTGTSGPDDIESLGDVYVWGEVWSDGISPDG---VVNSTTVKID 257

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L+PK +ES + LDVH IACG RH  LVT+QGE+F+W EE+GGRLGHG + DV  P+L+E
Sbjct: 258 VLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVE 317

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L+  N++ VACGEYHTCAV+ SGDL+TWGDG +N GLLGHGS +S WIP++VSG ++G+
Sbjct: 318 FLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGL 377

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +  ++CG WH+A+ T+ G LFTFGDG+FG LGHGD  S S P+EV+ L GL+T +V+CG
Sbjct: 378 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACG 437

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           VWHT A+V   + + +S    TS  KLFTWGDGDK RLGHG+KE  L P CV+ LID N 
Sbjct: 438 VWHTVAIVEVMNQTGTS----TSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 493

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            Q+ACGH  +VALTTSGHV+TMG  ++GQLG   +DG +P  V   +   FVEE++CG +
Sbjct: 494 NQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDH 553

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           HVA LTS S+V+TWGKG+NG+LGHGDKD+R +PTLV+ L+++ VK + CG NFT+ IC+H
Sbjct: 554 HVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSICIH 613

Query: 592 KWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCD 651
           KWVS  D SVCS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD
Sbjct: 614 KWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCD 673

Query: 652 DCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSF 711
            C+TKLK  +      SGY S V +  + T   +       DR+ +  R      IL S 
Sbjct: 674 ACYTKLKAGE------SGYNSNVANRNSTTPTRSLDGTGRPDRDIRSSR------ILLSP 721

Query: 712 DSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSS 771
            +     S +     +  +      P    LQ  R  +  SS+   +++ K  ++S++S+
Sbjct: 722 KTEPVKYSEVRSSRSESSIVRASQVPA---LQQLRDVAFPSSLSAIQNAFKPVASSSTST 778

Query: 772 RMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELE 831
             S   +S +S    S+  S   ID  K+ N  +N+E+ KL++Q++ L  K ++   E++
Sbjct: 779 LPSGTRSSRISSPPRSSGFSRGMIDTLKKSNGVINKEMTKLQSQIKNLKEKCDNQGTEIQ 838

Query: 832 RTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           R  K  +  + +A   + K K A EV+KS+
Sbjct: 839 RLKKTAREASDLAVKHSSKHKAATEVMKSV 868


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/908 (45%), Positives = 540/908 (59%), Gaps = 124/908 (13%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYS  EER LKL+ VSRIIPGQRTA F+RY RPEK+Y SFSL+YN  +RSLDL+ +  
Sbjct: 50  LIWYSHGEERNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLVSEMG 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPF---------- 109
              EVWL GL+ALI+ G H        N  T SD P  RI      +  +          
Sbjct: 110 LFTEVWLAGLQALISTGQHR-------NRRTRSDIPDVRISFQHQYIYAYVNIYLQKNGT 162

Query: 110 -------------DFGD-IQGTQ---VPLDNVSNNGLGKAFADIISYTEAANTNSRADSV 152
                        D GD IQ  +   V LD  S+   G++  D+         +SR  S+
Sbjct: 163 FICYIYIMLFQFHDGGDFIQNGRPFGVNLDFASSIARGRSSVDL---------SSRDSSL 213

Query: 153 SFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIAN 212
           +++ S    +   N   R+S  + FRIS+SS  S SS GS  +D +SLGDV++WGE    
Sbjct: 214 NWASSD-AGSERTNMQLRTSGVDGFRISVSSTPSCSSQGSGPDDIESLGDVYVWGE---- 268

Query: 213 GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
                                               IACG RH  LVT+QGE+F+WGEES
Sbjct: 269 ------------------------------------IACGVRHVALVTRQGEVFTWGEES 292

Query: 273 GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
           GGRLGHG + D S P L+E L+  NV+ VACGEYHTCAV+ SGDL+TWGDGT+N+GLLGH
Sbjct: 293 GGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGH 352

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           G++VS WIP++VSG L+G+ +  ++CG WH+A+ TS G LFTFGDG+FG LGHGD  S  
Sbjct: 353 GTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVP 412

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            PREV+ L GL+T +V+CGVWHTAA++     S ++     S  KLFTWGDGDK RLGHG
Sbjct: 413 YPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTN----ISSRKLFTWGDGDKHRLGHG 468

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            KE  L P CV+ LID N  Q+ACGH ++VALTTSGHV+TMG  AYGQLG P++DG +P 
Sbjct: 469 SKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPC 528

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            V  ++   FVEE++CGAYHVA LTS S+V+TWG+GANG+LGHGD ++R SPT V+ LKD
Sbjct: 529 LVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKD 588

Query: 573 KQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSR 632
           + VK + CG NFTA IC+HKWVS  D SVCS C   FGF RKRHNCYNCGLV C ACSS+
Sbjct: 589 RNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSK 648

Query: 633 KSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELA 692
           K+LKAALAP+  KP+RVCD C+ KLK  +      +G  S+     NR   V  ++ +  
Sbjct: 649 KALKAALAPTPGKPHRVCDPCYAKLKAAE------AGDASIF----NRKNTVPRRSIDAT 698

Query: 693 DR----EAQGPRLQDQLSILSSFDSNKQTESRL-SKQNLKLELQDNHVYPVNKNLQMGRI 747
            R    E +  R+      ++ F+      +RL  + +    +Q +    + K++     
Sbjct: 699 IRSDRGEVRSARILMSPGPINYFEFKP---ARLGPRPDPSPMIQSSQGPSLLKDIAF--- 752

Query: 748 YSPKSSIFLAKSSKKKFSASASSSRMS------SLATSPVSGKSSSARS-----SAVTID 796
             P S   L  + K   +AS  ++         S   SP S + S  RS     S   ID
Sbjct: 753 --PSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVID 810

Query: 797 DSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANE 856
             K+ N+ LNQE+ KL+ QV  L  KSE  +AE+++  K  +    +A +E+ KC  A E
Sbjct: 811 SLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKE 870

Query: 857 VIKSLTVQ 864
           V+KS+T Q
Sbjct: 871 VVKSITTQ 878


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/884 (44%), Positives = 536/884 (60%), Gaps = 83/884 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW+S  EE+ LKL +VSRI+PGQRTA F+R+ RPEK++ SFSL+YN  +RSLDLICKDK
Sbjct: 56  LIWFSRGEEKGLKLFEVSRIVPGQRTAVFKRFLRPEKDHLSFSLLYNNRERSLDLICKDK 115

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   LK LI +                S + RAR                  +++
Sbjct: 116 AETEVWFAALKFLIEK----------------SRNRRAR------------------SEI 141

Query: 120 P-LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
           P + +     +G+   D +     +N      S+       ++   +  N    + + FR
Sbjct: 142 PEIHDSDTFSVGRQSIDFV----PSNIPRGRTSIDLGYQNNSDVGYERGNMLRPSTDGFR 197

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           IS+SS  S SS GS  +D +SLGDV++WGE    G L  G      + + +TD L P+ +
Sbjct: 198 ISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNETVKTDVLTPRPL 254

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDVH I CG RH  LVT+QGE+F+WGEE GGRLGHG + D+S P+L+E L+  N+
Sbjct: 255 ESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNI 314

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + VACGEYHTC V+ SGDL++WGDG +N GLLGHGS +S WIP++VSG L+G+ +  ++C
Sbjct: 315 DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVAC 374

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+ T+ G LFTFGDG+FG LGHG+  S S P+EV++L GL+T +V+C +WHTAA+
Sbjct: 375 GTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAI 434

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V     +++S     S  KLFTWGDGDK RLGHG+KE  L P CV+ LID N  ++ACGH
Sbjct: 435 VEVMGQTATS----MSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGH 490

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             +VALTTSGHV+TMG  A+GQLG  ++DG +P  V   +   FVEE+ACGA+HVA LTS
Sbjct: 491 TFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTS 550

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+V+TWGKGANG+LGHGD +++ +PTLV+ L+D+ VK + CG NFT+ IC+HKWVS  D
Sbjct: 551 RSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGAD 610

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            S+CS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD C++KLK
Sbjct: 611 QSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLK 670

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSS---FDSNK 715
             +      SGY+S          NVN   A    R   G    D+ +  SS     +NK
Sbjct: 671 AAE------SGYSS----------NVNRNVA-TPGRSIDGSVRTDRETTRSSKVLLSANK 713

Query: 716 QTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSS 775
            +    S+     E  +     V    Q+  I  P S   +  + K   + + +  R   
Sbjct: 714 NSVMSSSRPGFTPESSNARASQVPSLQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTLV 773

Query: 776 LA------------TSPVSGKSSSARSSAVT---IDDSKQMNDSLNQEIIKLRAQVEELT 820
           +             +SP + + S  R+S  +   ID  ++ N+ +NQE+ KL +QV+ L 
Sbjct: 774 IGPSSPSPPPPPRSSSPYARRPSPPRTSGFSRSVIDSLRKTNEVMNQEMTKLHSQVKNLK 833

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            +  +   E+ER  K  K  + +A  ++ K K A E +KS+  Q
Sbjct: 834 QRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQ 877


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/864 (44%), Positives = 532/864 (61%), Gaps = 69/864 (7%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKD 58
           +L+WYS  +E+ LKL+ VS+IIPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD
Sbjct: 39  ILVWYSKHKEKCLKLSAVSKIIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKD 98

Query: 59  KDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQ 118
           + E EVW   L+ LIT            +C  + D    R+   S  VT +   ++ GT 
Sbjct: 99  QAEVEVWFSTLETLIT------------SCRVT-DCQSDRV-SFSDEVTQYQDSNLYGTT 144

Query: 119 VPLDNVSNNGLGKAFADIISYTEAANTNS-RADSVSFSPSPLTNAFPDNSNDRSSAAETF 177
           V + +        A      Y+ A + NS RAD  S   + L  +  D+S    S++   
Sbjct: 145 VDIASSITRTFNSA-----GYSTANSLNSSRADVGSDRANMLRVSTGDSSRISISSSIP- 198

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
                   SSSS GS  +D +SLGDV++WGE   +     G   +  S   +TD L+PK 
Sbjct: 199 --------SSSSQGSGPDDIESLGDVYVWGEVWTDVIPSEGSSNLVCS---KTDVLIPKP 247

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +ES + LDV  I+CG+RH  L T+QGE+F+WGEE GGRLGHG + D+S P+L+E L+  N
Sbjct: 248 LESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSN 307

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           VE +ACGE+HTCAVT SGDLY WGDG+YN+GLLGHG   S W+P++VSG L+G+ +  ++
Sbjct: 308 VEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVA 367

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG WH+A+  S+G +FTFGDG+FGALGHG+  + + P+EVE+L G RT +V+CGVWH+AA
Sbjct: 368 CGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAA 427

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +V  T    S    +    KLFTWGDGDK RLGHGDKE RL P  V  L+D N  QVACG
Sbjct: 428 IVETT----SQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACG 483

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           + +++AL TSGHV+TMGS+ YGQLG P ADG  P +V  +++   VEE++CG+YHVA LT
Sbjct: 484 YSMTIALATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLT 543

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S S+VYTWG GANG+LGHG  +++  PT+VD LKD+ VK + CG NFT  IC+HKWVS  
Sbjct: 544 SRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICIHKWVSGA 603

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           D SVCS C  PFGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KL
Sbjct: 604 DQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL 663

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQT 717
           K  D          S   SP N+   +  ++ ++ ++  +      +L+  +  +  K  
Sbjct: 664 KAAD----------SGSNSPYNKKSVITRRSVDIKEKSERPDIRPSRLATAAPAEPMKHA 713

Query: 718 ESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLA 777
           +++  + ++K +       P  + L +    SP               A    S  S   
Sbjct: 714 DTKSVRNDVKPDPTTMARAP--QALSVPTTVSP---------------AQPKKSNPSPAT 756

Query: 778 TSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQL 837
            SP++ KS +   +    D  K+  ++LNQE+ KL+ QV +L  K E  + +L+++ K+ 
Sbjct: 757 VSPLAIKSDTKSDT----DGMKKTIETLNQELSKLQTQVTKLKQKCEVQDEQLQKSEKRA 812

Query: 838 KTVTAIAEDEAEKCKTANEVIKSL 861
           K+  ++A +E+ +     + ++ L
Sbjct: 813 KSAASLASEESARRNAVLDFVRFL 836


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/866 (45%), Positives = 533/866 (61%), Gaps = 65/866 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S  +E+ LKL+ VSR++ GQRT  FQR+  PEK++ SFSLIYND  RSLDLICKDK
Sbjct: 43  LIWVSNNKEKSLKLSSVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDK 102

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVW  GL  LI+ G H               S    I         F+ G       
Sbjct: 103 VEAEVWFAGLNVLISPGQHG--------------SQHQHIDGIRNGALSFECGRDSSLSS 148

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
                ++     +F + +S   +AN+     S  F+ S  T+    +      A+   RI
Sbjct: 149 SSAYTTD-----SFENKLS---SANSAKDRSSGEFTYSERTDV---SDMQVKGASSDIRI 197

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +S+SSHGS  +D +S GDV++WGE + +     G     YS +  TD L+PK +E
Sbjct: 198 SVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLE 256

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV  +ACG +HA LVT+Q E+F+WGEE  GRLGHG    +  P+L+E LS  NVE
Sbjct: 257 SNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVE 316

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACGE+HTCA+T +GDLYTWGDGT+N+GLLGHGS VS WIP++VSG L+G+ +S +SCG
Sbjct: 317 TIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCG 376

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WHTA++TS+G L+TFGDG+FG LGHG+  + S P+EVE+L+GLRT  VSCGVWHTAAVV
Sbjct: 377 TWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVV 436

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               + S+     TS GKLFTWGDGDK RLGHGD+  +L P CV  LID N  +  CGH 
Sbjct: 437 EVIMAQSN-----TSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHT 491

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           L++ LTTSGH++T GS+ YGQLG P  DG  P  V+ ++    V EVACGAYHVA LT +
Sbjct: 492 LTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQS 551

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
            +VYTWGKGANG+LGHGD  +R +PT V+ L+D+ VKR+ CG  FTA IC HK VS ++ 
Sbjct: 552 GEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQ 611

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           S CSSC  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ KL K
Sbjct: 612 SQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSK 671

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQTE 718
                       S +   +N T  +   +   AD+ +++G R    ++  +S D  K  +
Sbjct: 672 V---------LDSGIGHNKNNTPRIPGDSK--ADKMDSKGNR----VASANSSDMIKNLD 716

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
            + +KQ  K +      YP     Q   I   K   F+  + ++   ++ SS  +     
Sbjct: 717 VKAAKQTKKYD------YPP----QFPAILQLKDIPFIGAADQQPNDSTYSSPLLR---- 762

Query: 779 SPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLK 838
             +   +SS+  S+ + D  +  N+ L QE+ KL+ +V  L  + E  +A+L+++  +  
Sbjct: 763 --LPNLNSSSSLSSESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAH 820

Query: 839 TVTAIAEDEAEKCKTANEVIKSLTVQ 864
               +A +EA K K A +VIKSLT Q
Sbjct: 821 EAMTLASEEASKSKAAKDVIKSLTAQ 846


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/868 (44%), Positives = 535/868 (61%), Gaps = 66/868 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW+S K+E+ L+L+ V++IIPGQRTA F R+  PEK+Y SFSLI+ +  RSLDL+CKD+
Sbjct: 40  LIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ LI+    S  K   IN        + R+   S  VT +   D      
Sbjct: 100 AEVEVWFSALEGLIS----SFRKKSLIN------EHKDRV-SFSEEVTYYQ--DRHSYDS 146

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
            LD  SN  + ++F          N+     + SFS       F   +  R+SAA++ R+
Sbjct: 147 TLDIASN--ISRSF----------NSAGYCGTNSFSFRKSDVGFDRLNMIRTSAADSSRV 194

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +SS S GS  +D +SLGDV++WGE   +     G      S   + D L+PK +E
Sbjct: 195 SISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDGHTSSSCS---KVDVLIPKPLE 251

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV+ IACG RH  L T+QGE+F+WGEE GGRLGHG +AD+S P+L+E LS   V+
Sbjct: 252 SDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD 311

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G++VS W+P+KVSG L+G+ +  ++CG
Sbjct: 312 LISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WH+A+ TS+G L+TFGDG+FG LGHGD  + + P+EVE L G +T +V+CG+WH+AA+V
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIV 431

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
             T+ + ++        KL+TWGDGDK RLGHGDKEPRL P+CV  L++ N  Q+ACGH+
Sbjct: 432 EVTNQTGAN----VMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHN 487

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           ++VAL TSG V+TMGS++ GQLG P +DG  P  V   +A   VEE++CGA HV  LTS 
Sbjct: 488 MTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSR 547

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           S+VYTWG GANG+LGHGD  +R  P LV+ LKD+ VK + CG NFT  IC+HKWVS  D 
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQ 607

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           SVC+ C   FGF RKRH+CYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK 
Sbjct: 608 SVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKA 667

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTES 719
            +T    ++   +V +  R+  G    +  E+       P            +S K TE 
Sbjct: 668 AETGSNNSNRRNAVTR--RSIDGREKLERPEIRPSRTTAPA-----------ESVKYTEV 714

Query: 720 RLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT- 778
           + ++ +++               Q+  +   K   F A        A   S  + +L+T 
Sbjct: 715 KAARNDMRAS-------------QISSLLQFKDLSFSALQPTAMSPAVTMSPAVPALSTP 761

Query: 779 SPVSGKSSSARSS-----AVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERT 833
           SP + K+ S   +        ID+ ++ N+ LNQE++KL++QV+ L  K E    +L+ +
Sbjct: 762 SPYTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEMLKLQSQVDSLKQKCEAQHEQLQIS 821

Query: 834 SKQLKTVTAIAEDEAEKCKTANEVIKSL 861
            K+ KTV ++A +E  +C    E +K L
Sbjct: 822 DKKTKTVVSMATEEYTRCSAVVEFVKFL 849


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/915 (44%), Positives = 557/915 (60%), Gaps = 84/915 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIWYS K+E+ L+L+ VS++IPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 40  LIWYSHKKEKFLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ALI+          + + ++S D  + R+   S  V+ +  G       
Sbjct: 100 VEVEVWFSALEALIS----------SCHRNSSVDEHKDRV-SFSDDVSYYRDGH------ 142

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND-RSSAAETFR 178
           P D+  +       A  IS +       R  S SF  S   +A  D +N  R+S A++ R
Sbjct: 143 PYDSTLD------IASSISRSFNTADYCRGSSFSFRRS---DAGSDRANMIRTSGADSTR 193

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  SSSS GS  +D +SLGDV++WGE   +     G      S   + D L+PK +
Sbjct: 194 LSISSAPSSSSQGSGTDDIESLGDVYVWGEVWTDAAPSDGHTSSSCS---KVDVLIPKPL 250

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDV+ I CG+RH  L T+QGE+F+WGEE GGRLGHG + D+S P+L+E LS   V
Sbjct: 251 ESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIV 310

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + ++CGE+HTCA++ SGDL+ WGDG+Y +GLLG+ +  S W+P++VSG L+G+ +  ++C
Sbjct: 311 DFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVAC 370

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A++TS G L+TFGDG FGALGHG+  S + P+EVE L G RT +V+CGVWH+AA+
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAI 430

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V A    S     +    KL+TWGDGDK RLG GDKE RL P C+  L++ N  Q+ CG 
Sbjct: 431 VEA----SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQ 486

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           +++VAL TSGHVYTMGS+  GQLG P +DG  P  V  ++A   VEE++CGA HVA LTS
Sbjct: 487 NMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTS 546

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+VYTWG GANG+LGHGD +++ +PT+V+ LKD+ VK + CG NFT  IC+H+WVS  D
Sbjct: 547 RSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICIHRWVSGAD 606

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVC+ C   FGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK
Sbjct: 607 QSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLK 666

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQT 717
             DT             S  NR      ++ +  ++ E + PR    L    S +  K  
Sbjct: 667 NADTS-----------SSNANRRNAATRRSTDSREKPEIRPPR----LVATPSAEPGKYM 711

Query: 718 ESRLSKQNLK--------------LELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSK-K 762
           E + SK ++K              L+ +D     +    Q G +        LA S    
Sbjct: 712 EVKASKSDMKPADSIMKASQASALLQFKD-----LGFGAQFGGLQPMGMPPALAMSPAIP 766

Query: 763 KFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSK 822
            FS +  S     + + P    S+  +SS V +D  ++ ND LNQE++KL++QVE+L  K
Sbjct: 767 AFSLAPPSPYTKKMKSPPT---SAIPQSSKVDVDHLQKSNDLLNQEVLKLQSQVEDLKQK 823

Query: 823 SEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL--TVQGLNSKV------GLWN 874
            E    +L+++ K+ K+V ++A +E+ K   A E +K L   ++G+  K+       L  
Sbjct: 824 CEAQHEQLQKSDKKAKSVASMATEESSKRNAAVEFVKFLDNELKGIADKLPVDVADSLKA 883

Query: 875 NQDRNRQALLWEQLG 889
            Q R  Q+LL EQ G
Sbjct: 884 LQMRT-QSLLREQSG 897


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/873 (44%), Positives = 534/873 (61%), Gaps = 77/873 (8%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           L+WYS  + + L L+ VSRIIPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 40  LVWYSHSKVKYLVLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ALIT          +   S S+D P  R+   S  V+ +          
Sbjct: 100 AEVEVWFSTLEALIT----------SCRKSYSADGPSDRL-SVSDEVSHYQ--------- 139

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
             D   +  L     DI S       +++ D VS           D +N   ++ ++ R+
Sbjct: 140 --DTFHDTTL-----DIASSITRTFNSAKTDVVS-----------DRANMLRASTDSSRL 181

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS  SSSS GS  +D +SLGDV++WGE   +     G     Y  S+  D L+PK +E
Sbjct: 182 SISSAPSSSSQGSGQDDIESLGDVYVWGEVWTDMIPAEGS--ANYLCSK-ADILIPKPLE 238

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV  IACG RH  L T+QGE+F+WGEE GGRLGHG +AD+S P+L+E L+  NVE
Sbjct: 239 SDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVE 298

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            VACGE+HTCA+T SGDLYTWGDG YN+GLLGHG+  S W+P++VSG L+G+ +  +SCG
Sbjct: 299 YVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCG 358

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WH+A+ TS+G +FTFGDG+FGALGHG+  + + P+EVETL G RT +V+CG+WH+AA+V
Sbjct: 359 SWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIV 418

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
             T+ +  +        KLFTWG GDK  LGHGDK+ RL P CV  LID N  QVACGH 
Sbjct: 419 ETTNQAGVN----VISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHS 474

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           +++AL+TSGHV+TMGS++ GQLG P +DG  PT V   +A   VEE++CG+ HVA LTS 
Sbjct: 475 MTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSR 534

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           S+VYTWG GANG+LGHG  +++  PTLV+ LKD+ VK + CG NFT  IC+HKWVS  D 
Sbjct: 535 SEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGADQ 594

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           SVCS C  PFGF RKRHNCYNCGLV C ACSS+K LKAALAP+  KP+RVCD CF KLK 
Sbjct: 595 SVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSKKVLKAALAPTPGKPHRVCDSCFMKLKA 654

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTES 719
            +T        ++   S RN    +  ++ +  DR  +      +L+  S+ +  KQ E 
Sbjct: 655 AETS-------SNSSHSKRN---AIARRSVDSKDRSERPEIRSSRLATGSTAEPLKQAEL 704

Query: 720 RLSKQNLKLE-------LQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
           +  +  +K +        Q   + P N NL  G  +   +S+     +    +   S + 
Sbjct: 705 KAVRNEIKPDPMSTMRAPQVPSMLPFN-NLAFGATFGGPASLKPMTMAPMPMAMPMSPAP 763

Query: 773 MSS----LATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEA 828
           ++      A +P+ GKS +        D+ K     LN++I KL++QV +L  K +  E 
Sbjct: 764 LTKKPTPAAATPLCGKSDT--------DNLKMAKQVLNEDISKLQSQVNKLKQKCDAQEE 815

Query: 829 ELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           +L++  ++ +   + A +E+ +     E I+ L
Sbjct: 816 QLQKAERRAEHSASTAAEESSRRNGVLEFIRFL 848


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/885 (43%), Positives = 529/885 (59%), Gaps = 94/885 (10%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW+S  EE+ LKL +VSRI+PGQRT    R+ RPEK++ SFSL+YN  +RSLDLICKDK
Sbjct: 51  LIWFSRGEEKGLKLFEVSRIVPGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDK 106

Query: 60  DEAEVWLVGLKALI--TRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGT 117
            E EVW   LK LI  +R   ++ ++  I+ S +    R  I             D   +
Sbjct: 107 AETEVWFAALKFLIEKSRNRRARSEIPEIHDSDTFSVGRQSI-------------DFVPS 153

Query: 118 QVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETF 177
            +P    S + LG      + Y                         +  N    + + F
Sbjct: 154 NIPRGRTSID-LGYQNNSDVGY-------------------------ERGNMLRPSTDGF 187

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           RIS+SS  S SS GS  +D +SLGDV++WGE    G L  G      + + +TD L P+ 
Sbjct: 188 RISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNETVKTDVLTPRP 244

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +ES + LDVH I CG RH  LVT+QGE+F+WGEE GGRLGHG + D+S P+L+E L+  N
Sbjct: 245 LESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTN 304

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           ++ VACGEYHTC V+ SGDL++WGDG +N GLLGHGS +S WIP++VSG L+G+ +  ++
Sbjct: 305 IDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVA 364

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG WH+A+ T+ G LFTFGDG+FG LGHG+  S S P+EV++L GL+T +V+C +WHTAA
Sbjct: 365 CGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAA 424

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +V     +++S     S  KLFTWGDGDK RLGHG+KE  L P CV+ LID N  ++ACG
Sbjct: 425 IVEVMGQTATS----MSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACG 480

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           H  +VALTTSGHV+TMG  A+GQLG  ++DG +P  V   +   FVEE+ACGA+HVA LT
Sbjct: 481 HTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLT 540

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S S+V+TWGKGANG+LGHGD +++ +PTLV+ L+D+ VK + CG NFT+ IC+HKWVS  
Sbjct: 541 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGA 600

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           D S+CS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD C++KL
Sbjct: 601 DQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKL 660

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSS---FDSN 714
           K  +      SGY+S          NVN   A    R   G    D+ +  SS     +N
Sbjct: 661 KAAE------SGYSS----------NVNRNVA-TPGRSIDGSVRTDRETTRSSKVLLSAN 703

Query: 715 KQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMS 774
           K +    S+     E  +     V    Q+  I  P S   +  + K   + + +  R  
Sbjct: 704 KNSVMSSSRPGFTPESSNARASQVPSLQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTL 763

Query: 775 SLA------------TSPVSGKSSSARSSAVT---IDDSKQMNDSLNQEIIKLRAQVEEL 819
            +             +SP + + S  R+S  +   ID  ++ N+ +NQE+ KL +Q    
Sbjct: 764 VIGPSSPSPPPPPRSSSPYARRPSPPRTSGFSRSVIDSLRKTNEVMNQEMTKLHSQ---- 819

Query: 820 TSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             +  +   E+ER  K  K  + +A  ++ K K A E +KS+  Q
Sbjct: 820 -QRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQ 863


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/915 (43%), Positives = 556/915 (60%), Gaps = 83/915 (9%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIWYS K+E+ L+L+ VS++IPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 40  LIWYSHKKEKFLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ LI           + + ++S D  + R+  +        + D      
Sbjct: 100 VEVEVWFSALEGLIN----------SCHRNSSVDEHKDRVSFSDDASY---YQDSHSYDS 146

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND-RSSAAETFR 178
            +D  S            S + + NT       SFS    ++A  D +N  R+S A++ R
Sbjct: 147 TVDIAS------------SISRSFNTAGYCGGSSFSFR-RSDAGSDRANMIRTSGADSTR 193

Query: 179 ISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           +S+SS   SSS   +  +D +SLGDV++WGE   +     G      S   + D L+PK 
Sbjct: 194 LSISSAAPSSSSQGSGTDDIESLGDVYVWGEVWTDAAPSDGH---TTSSCSKVDVLIPKP 250

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +ES + LDV+ I CG+RH  L T+QGE+F+WGEE GGRLGHG + D+S P+L+E +S   
Sbjct: 251 LESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTI 310

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V+ ++CGE+HTCA++ SGDL+ WGDG+Y++GLLG+ +  S W+P++VSG L+G+ + +++
Sbjct: 311 VDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVA 370

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG WH+A++TS G L+TFGDG+FGALGHG+  S++ P+EVE L G RT +V+CGVWH+AA
Sbjct: 371 CGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAA 430

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +V AT  +      +    KL+TWGDGDK RLG GDKE RL P CV  L++ N  Q+ACG
Sbjct: 431 IVEATVQTGM----NMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACG 486

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
            +++VAL TSGHVYTMGS+  GQLG P +DG  P  V  ++A   VEE++CGA HVA LT
Sbjct: 487 QNMTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLT 546

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S S+VYTWG GANG+LGHGD +++ +PT+V+ LKD+ VK + CG NFT  IC+HKWVS  
Sbjct: 547 SRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSGA 606

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           D SVC+ C   FGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KL
Sbjct: 607 DQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKL 666

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQ 716
           K  DT             S  NR      ++ +  ++ E + PR    L    S +  K 
Sbjct: 667 KNADT-----------TTSNANRRNAATRRSIDSREKPEIRPPR----LVATPSAEPVKY 711

Query: 717 TESRLSKQNLK--------------LELQDNHVYPVNKNLQ-MGRIYSPKSSIFLAKSSK 761
            E +++K ++K              L+ +D         LQ MG   SP  +I  A  S 
Sbjct: 712 MEVKVAKNDMKSADSIMKASQASALLQFKDLGFAAQFGGLQPMG--MSPSVAISPAIPS- 768

Query: 762 KKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
             FS +  S+      + P S    S +   V +D  ++ ND LNQE+++L++QVE+L  
Sbjct: 769 --FSVAPPSAYTKKAKSPPASAIPQSCK---VDVDHLQKSNDLLNQELLRLQSQVEDLKQ 823

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL--TVQGLNSKVGL-----WN 874
           K E    +L+++ K+ K+V ++A +E+ K   A E +K L   ++G+  K+ +       
Sbjct: 824 KCEAQHEQLQKSDKKAKSVASMATEESSKRNAAVEFVKFLDHELKGIVDKLPVDAADSMK 883

Query: 875 NQDRNRQALLWEQLG 889
                 Q+LL EQ G
Sbjct: 884 ALQMKTQSLLREQSG 898


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/875 (44%), Positives = 531/875 (60%), Gaps = 62/875 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           L+WYS  +E+ L+L+ VS++IPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 45  LVWYSHNKEKCLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 104

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L++LIT       +L  +N     D    R+   S  VT +   D      
Sbjct: 105 AEVEVWFSTLESLIT-----SCRLNFLN-----DGQTDRV-SFSEDVTIYQ--DSTSYDT 151

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNS-RADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
            LD  S+  + ++F +   Y+   + NS RAD  S   + L  +  DNS          R
Sbjct: 152 TLDIASS--ITRSF-NSAGYSTPNSLNSIRADVGSDRVNMLRASTGDNS----------R 198

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  SSSS  S  +D +SLGDV++WGE         G          +TD L+PK +
Sbjct: 199 VSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVLPSEGSSNY---LCSKTDFLIPKPL 255

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDV  IACG+RH  L T+QGE+F+WGEE GGRLGHG + D+  P+L+E L+  NV
Sbjct: 256 ESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNV 315

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           E +ACGE+HTC VT SGDLY WGDG+YN+GLLGHG+ VS W+P++VSG L+G+ +  ++C
Sbjct: 316 EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVAC 375

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+  S+G LFTFGDG+FG+LGHGD  S + P+EVE L G R  +V+CGVWH+AA+
Sbjct: 376 GSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAI 435

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V  +  +S++        KLFTWGDGDK RLGHGDKE +L P CV  L+D N  QVACGH
Sbjct: 436 VEISGQASTNAMSR----KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGH 491

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            ++VAL TSGHV+TMGS+  GQLG P ADG  P  V  ++    VEE++CG+ HVAALTS
Sbjct: 492 SMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTS 551

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+VYTWG GANG+LGHG  +++  PTLVD LKD+ VK + CG NFT  IC+HKWVS  D
Sbjct: 552 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGAD 611

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVCS C  PFGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK
Sbjct: 612 QSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLK 671

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
             DT           V S  N+   +  ++ ++ D+  +      +L+  S  +  K  E
Sbjct: 672 AADTG----------VISSYNKRNVITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQE 721

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
           ++    N++ E +      + K  Q+  +   K   F         +  + +        
Sbjct: 722 TK----NVRNETKPADPMSMMKASQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMG 777

Query: 779 SPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHL 826
            P+   S  ++  +            V  D  K+ N+ LNQ+I KL++QV +L  K E  
Sbjct: 778 MPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQ 837

Query: 827 EAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           + +L++  ++ K   ++A +E+ +  T  + +K L
Sbjct: 838 DEQLQKAERKAKQAASMASEESARRNTVLDFVKHL 872


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/875 (44%), Positives = 531/875 (60%), Gaps = 62/875 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           L+WYS  +E+ L+L+ VS++IPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 59  LVWYSHNKEKCLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 118

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L++LIT       +L  +N     D    R+   S  VT +   D      
Sbjct: 119 AEVEVWFSTLESLIT-----SCRLNFLN-----DGQTDRV-SFSEDVTIYQ--DSTSYDT 165

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNS-RADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
            LD  S+  + ++F +   Y+   + NS RAD  S   + L  +  DNS          R
Sbjct: 166 TLDIASS--ITRSF-NSAGYSTPNSLNSIRADVGSDRVNMLRASTGDNS----------R 212

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  SSSS  S  +D +SLGDV++WGE         G          +TD L+PK +
Sbjct: 213 VSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVLPSEGSSNY---LCSKTDFLIPKPL 269

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDV  IACG+RH  L T+QGE+F+WGEE GGRLGHG + D+  P+L+E L+  NV
Sbjct: 270 ESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNV 329

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           E +ACGE+HTC VT SGDLY WGDG+YN+GLLGHG+ VS W+P++VSG L+G+ +  ++C
Sbjct: 330 EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVAC 389

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+  S+G LFTFGDG+FG+LGHGD  S + P+EVE L G R  +V+CGVWH+AA+
Sbjct: 390 GSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAI 449

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V  +  +S++        KLFTWGDGDK RLGHGDKE +L P CV  L+D N  QVACGH
Sbjct: 450 VEISGQASTNAMSR----KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGH 505

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            ++VAL TSGHV+TMGS+  GQLG P ADG  P  V  ++    VEE++CG+ HVAALTS
Sbjct: 506 SMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTS 565

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+VYTWG GANG+LGHG  +++  PTLVD LKD+ VK + CG NFT  IC+HKWVS  D
Sbjct: 566 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGAD 625

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVCS C  PFGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK
Sbjct: 626 QSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLK 685

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
             DT           V S  N+   +  ++ ++ D+  +      +L+  S  +  K  E
Sbjct: 686 AADTG----------VISSYNKRNVITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQE 735

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
           ++    N++ E +      + K  Q+  +   K   F         +  + +        
Sbjct: 736 TK----NVRNETKPADPMSMMKASQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMG 791

Query: 779 SPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHL 826
            P+   S  ++  +            V  D  K+ N+ LNQ+I KL++QV +L  K E  
Sbjct: 792 MPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQ 851

Query: 827 EAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           + +L++  ++ K   ++A +E+ +  T  + +K L
Sbjct: 852 DEQLQKAERKAKQAASMASEESARRNTVLDFVKHL 886


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/874 (44%), Positives = 530/874 (60%), Gaps = 67/874 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW+S  + + L L+ VSRIIPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 40  LIWHSHSKVKHLVLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ LIT          +   S S D P  R+  +                 
Sbjct: 100 AEVEVWFSTLETLIT----------SCRKSYSVDGPSDRLSISDE--------------- 134

Query: 120 PLDNVSNNGLGKAFADIIS-YTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
            + +  +N       DI S  T   N+   + + S + S  T+   D +N   ++ ++ R
Sbjct: 135 -VSHYQDNAFHDTTLDIASSITRTFNSAGYSTNNSLN-SAKTDVVSDRANMLRASTDSSR 192

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  SSSS GS  +D +SLGDV++WGE   +     G     Y  S+  D L+PK +
Sbjct: 193 LSISSAPSSSSQGSGQDDIESLGDVYVWGEVWTDVIPAEGS--TNYLCSK-ADILIPKPL 249

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ES + LDV  IACG RH  L T+QGE+F+WGEE GGRLGHG +AD+S P+L+E L+  NV
Sbjct: 250 ESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNV 309

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           E +ACGE+HTCAVT SGDLYTWGDG YN GLLG+G+  S W+P++VSG L+G+ +  +SC
Sbjct: 310 EYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSC 369

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+ TS+G +FTFGDG+FGALGHG   +   P+EVE L G RT +V+CG+WH+AA+
Sbjct: 370 GSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAI 429

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V     SS+  S +    KL+TWG GDK +LGHGDK+ RL P CV  LID +  QVACGH
Sbjct: 430 V----ESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGH 485

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            +++AL+TSGHV+TMGS++ GQLG P +DG  P  V   ++   VEE++CG+ HVA LTS
Sbjct: 486 SMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTS 545

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+VYTWG GANG+LGHG  +++  PTLV+ LKD+ VK + CG NFT  IC+HKWVS  D
Sbjct: 546 RSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGAD 605

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVCS C  PFGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK
Sbjct: 606 QSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLK 665

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
             DT    + G          +   +  ++ +  DR  +      +L+  S+ +  KQ E
Sbjct: 666 AADTSNNSSHG----------KRNAIARRSVDSKDRSERPEIRPSRLATGSTAEPLKQAE 715

Query: 719 SRLSKQNLKLE-------LQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSS 771
            +  +  +K +        Q   V P N NL  G  +   +S+     +    +   S S
Sbjct: 716 IKPVRNEIKPDPMSTMRAPQVPSVLPFN-NLAFGATFGGPASLKPMVMAPMPMAMPMSQS 774

Query: 772 RMSSL----ATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLE 827
            ++       T+P+ GKS +        D+ K     LN++I KL++QV +L  K +  E
Sbjct: 775 PLTKKPCPPTTTPLCGKSET--------DNLKIAKQVLNEDIAKLQSQVNKLKQKCDAQE 826

Query: 828 AELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
            +L++  ++ +   +IA +E+ +     E I+ L
Sbjct: 827 EQLQKAERRAENSNSIAAEESSRRNGVLEFIRFL 860


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/887 (44%), Positives = 529/887 (59%), Gaps = 98/887 (11%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW+S  EE+ LKL +VSRI+PGQRT    R+ RPEK++ SFSL+YN  +RSLDLICKDK
Sbjct: 51  LIWFSRGEEKGLKLFEVSRIVPGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDK 106

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW  GLK LI +                  S   R R   P +   D   + G Q 
Sbjct: 107 AETEVWFAGLKFLIEK------------------SRNRRARSEIPEIHDSDTFSV-GRQ- 146

Query: 120 PLDNVSNN-GLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
            +D V NN   G+   D+  Y   ++                    +  N    + + FR
Sbjct: 147 SIDFVPNNIPRGRTSIDL-GYQNNSDVGY-----------------ERGNMLRPSTDGFR 188

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT---DALLP 235
           IS+SS  S SS GS  +D +SLGDV++WGE    G L  G      + S++T   D L P
Sbjct: 189 ISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG------TVSKETVKTDVLTP 242

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           + +ES + LDVH I CG RH  LVT+QGE+F+WGEE GGRLGHG + D+S P+L+E L+ 
Sbjct: 243 RPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLAL 302

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
            N++ VACGEYHTC V+ SGDL++WGDG +N GLLGHGS +S WIP++VSG L+G+ +  
Sbjct: 303 TNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLS 362

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG WH+A+ T+ G LFTFGDG+FG LGHG+  S S P+EV++L GL+T +V+C +WHT
Sbjct: 363 VACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHT 422

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AA+V     + +S     S  KLFTWGDGDK RLGHG+KE  L P CV+ LID N  ++A
Sbjct: 423 AAIVEVMGQTGTS----MSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIA 478

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CGH  +VALTTSGHV+TMG  A+GQLG  ++DG +P  V   +   FVEE+ACG +HVA 
Sbjct: 479 CGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGDHHVAV 538

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
           LTS S+V+TWGKGANG+LGHGD +++ +PT V+ L+D+ VK + CG NFT+ IC+HKWVS
Sbjct: 539 LTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSICIHKWVS 598

Query: 596 SVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT 655
             D S+CS C   FGF RKRHNCYNCGLV C ACSS+K+LKAALAP+  KP+RVCD C++
Sbjct: 599 GADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYS 658

Query: 656 KLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSS---FD 712
           KLK  +      SGY+S          NVN   A    R   G    D+ +  SS     
Sbjct: 659 KLKAAE------SGYSS----------NVNRNVA-TPGRSIDGSVRSDKETTRSSKVLLS 701

Query: 713 SNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
           +N  +    S+  L  +  +     V    Q+  I  P S   +  + K   + + +  R
Sbjct: 702 ANTNSVRSSSRPGLTPDSSNARASQVPSLQQLKDIAFPSSLSAIQNAFKPVIAPTTTPPR 761

Query: 773 ------------MSSLATSPVSGKSSSARSSAVT---IDDSKQMNDSLNQEIIKLRAQVE 817
                           ++SP + ++S  R+S  +   ID  K+ N+ +NQE+ KL++Q  
Sbjct: 762 PLVVGPSSPSPPPPPRSSSPYARRTSPPRTSGFSRSVIDSLKKTNEVMNQEMTKLQSQ-- 819

Query: 818 ELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
               +  +   E+ER  K  K    +A  ++ K K A E +KS+  Q
Sbjct: 820 ---QRCNNQGTEIERFQKAAKDAFELAAKQSSKHKAATEALKSVAEQ 863


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/872 (45%), Positives = 537/872 (61%), Gaps = 66/872 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   E+ LKL  VSR++ GQRT  FQR+  PEK++ SFSLIYND  RSLDLICKDK
Sbjct: 43  LIWISDNTEKSLKLASVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDK 102

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E +VW   L ALI+ G H      T    T + S              FD G       
Sbjct: 103 VETQVWFTCLNALISPGQHGSQPQYTDGMRTGALS--------------FDCGR------ 142

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
             ++  ++        + +   +AN+     S  ++ S  T+A       +S+++   R+
Sbjct: 143 --ESSLSSSSTYTTDSLENKLSSANSTKDRSSGEYTYSERTDA--SEMQVKSASSSDIRV 198

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +S+SSHGS  ED +S GDV++WGE + +     G     +     TD L+PK +E
Sbjct: 199 SVSSALSTSSHGSG-EDSESFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLE 257

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV  +ACG +HA L+T+Q E+F+WGEE  GRLGHG    +  P+L+E LS  NVE
Sbjct: 258 SNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVE 317

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           ++ACGE+HTCAVT +GDLYTWGDGT+N+GLLGHGS VS WIP++VSG L+G+ +S +SCG
Sbjct: 318 IIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCG 377

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WHTA++TS+G L+TFGDG+FGALGHG+  + S P+EVE+L+GLRT  VSCGVWH+AAVV
Sbjct: 378 TWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVV 437

Query: 420 --VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
             + T S++SS       GKLFTWGDGDK RLGHGD+  +L P CV  LID N  + ACG
Sbjct: 438 EVIMTQSNASS-------GKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACG 490

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           H L++ LTTSGH++T+GS+ YGQLG P  DG  P  V+ ++    V EVACG+YHVA LT
Sbjct: 491 HTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLT 550

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           +T +VYTWGKGANG+LGHGD  +R  PTLV+ L+D+ VKR+ CG +FTA I  HKWVS V
Sbjct: 551 NTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTAAISQHKWVSGV 610

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           + S CS+C  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ KL
Sbjct: 611 EQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYMKL 670

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKT-AELADREAQGPRLQDQLSILSSFDSNKQ 716
            K            S V   RN    +   T AE  D +A       +++  +S D  K 
Sbjct: 671 SKV---------LDSGVSYSRNTIPRIPGDTKAERMDTKAT------RVASATSSDMIKN 715

Query: 717 TESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSL 776
            + + +KQ  K     +H       LQ+      K   F+         ++ S+   +  
Sbjct: 716 LDVKAAKQTKK----SDHAPQFPAILQL------KDIPFVGPGDLNNTGSTVSNGYSNDT 765

Query: 777 ATSP----VSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELER 832
             +P    +   +SS+  S+ +I+  ++ N+ L QE+ KLRA+V  L  + E  + EL++
Sbjct: 766 RYAPQILRMPHLNSSSSLSSESIESFREANELLKQEVQKLRAEVSSLRQEREQQDNELQK 825

Query: 833 TSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +  +      +A +E  K K A EVIKSLT Q
Sbjct: 826 SEAKAHEAVTLAAEEVSKSKAAKEVIKSLTAQ 857


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/866 (45%), Positives = 532/866 (61%), Gaps = 65/866 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S  +E+ LKL+ VSR++ GQRT  FQR+  PEK++ SFSLIYND  RSLDLICKDK
Sbjct: 68  LIWVSNNKEKSLKLSSVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDK 127

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            EAEVW  GL  LI+ G H               S    I         F+ G       
Sbjct: 128 VEAEVWFAGLNVLISPGQHG--------------SQHQHIDGIRNGALSFECGRDSSLSS 173

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
                ++     +F + +S   +AN+     S  F+ S  T+    +      A+   RI
Sbjct: 174 SSAYTTD-----SFENKLS---SANSAKDRSSGEFTYSERTDV---SDMQVKGASSDIRI 222

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +S+SSHGS  +D +S GDV++WGE + +     G     YS +  TD L+PK +E
Sbjct: 223 SVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLE 281

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV  +ACG +HA LVT+Q E+F+WGEE  GRLGHG    +  P+L+E LS  NVE
Sbjct: 282 SNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVE 341

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACGE+HTCA+T +GDLYTWGDGT+N+GLLGHGS VS WIP++VSG L+G+ +S +SCG
Sbjct: 342 TIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCG 401

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WHTA++TS+G L+TFGDG+FG LGHG+  + S P+EVE+L+GLRT  VSCGVWHTAAVV
Sbjct: 402 TWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVV 461

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               + S+     TS GKLFTWGDGDK RLGHGD+  +L P CV  LID N  +  CGH 
Sbjct: 462 EVIMAQSN-----TSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHT 516

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           L++ LTTSGH++T GS+ YGQLG P  DG  P  V+ ++    V EV CGAYHVA LT +
Sbjct: 517 LTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQS 576

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
            +VYTWGKGANG+LGHGD  +R +PT V+ L+D+ VKR+ CG  FTA IC HK VS ++ 
Sbjct: 577 GEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQ 636

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           S CSSC  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ KL K
Sbjct: 637 SQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSK 696

Query: 660 TDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQTE 718
                       S +   +N T  +   +   AD+ +++G R    ++  +S D  K  +
Sbjct: 697 V---------LDSGIGHNKNNTPRIPGDSK--ADKMDSKGNR----VASANSSDMIKNLD 741

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
            + +KQ  K +      YP     Q   I   K   F+  + ++   ++ SS  +     
Sbjct: 742 VKAAKQTKKYD------YPP----QFPAILQLKDIPFIGAADQQPNDSTYSSPLLR---- 787

Query: 779 SPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLK 838
             +   +SS+  S+ + D  +  N+ L QE+ KL+ +V  L  + E  +A+L+++  +  
Sbjct: 788 --LPNLNSSSSLSSESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAH 845

Query: 839 TVTAIAEDEAEKCKTANEVIKSLTVQ 864
               +A +EA K K A +VIKSLT Q
Sbjct: 846 EAMTLASEEASKSKAAKDVIKSLTAQ 871


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/878 (44%), Positives = 529/878 (60%), Gaps = 69/878 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDL----I 55
           LIW S  +E+ LKL+ V RII GQRTA F+RY RPEK+Y SFSLIY   +RSLDL    I
Sbjct: 44  LIWISHGKEKNLKLSSVLRIISGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLVRENI 103

Query: 56  CKDKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQ 115
           CKD  E EVWL GLKALI+ G                   + R R+T   +T  D  DI 
Sbjct: 104 CKDTAEVEVWLSGLKALISTG-------------------QLRNRRTRSELTD-DSNDIS 143

Query: 116 GTQVP----LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRS 171
               P    L+  ++   G+   + +     +N  S A S   S +P+          R+
Sbjct: 144 PNDRPFGGALEFTASIPKGRFSFEAVPRESTSNRRSDAGSEHTSMAPV----------RT 193

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           S  +  R+S+SS   +SS  S  +D +SLGDVFIWGE  A G    G   +G     + D
Sbjct: 194 SVGDGSRVSVSSTNYASSVVSGPDDIESLGDVFIWGEVWAEGNSSDG---LGSQVPSKID 250

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L+PK +ES + LDV+ I  G  H  LVT+QGEIF+WGE+SGGRLGHG + D   P+L++
Sbjct: 251 MLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVD 310

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L+  +V  VACGEYHTCAV+ SGDLYTWGDGT+N+G+LGHG+ VS  IP++V+G L+G 
Sbjct: 311 SLAITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGH 370

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +  I+CG WHTA++TS G LFTFGDG+ G LGHGD  S + P+E++ L G +  +V+CG
Sbjct: 371 QVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACG 430

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           VWHTAA++   D S SS S ++S  KLFTWGDGD+ RLGH +KE  L P CVA L D N 
Sbjct: 431 VWHTAAIIEVNDQSGSS-SNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNF 489

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            QVACGH L+VALT SGHV+TMGS AYGQLG P +DG VP  V  ++    VEE++CG +
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTH 549

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           HVA LTS S++YTWG+GANG+LGHGD +++ +P LV+ LK++ VK + CG NFT  IC+H
Sbjct: 550 HVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCICIH 609

Query: 592 KWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCD 651
           KWVS  D SVCS C  PFGF RKRHNCY+CGLV+C  CSS+K+LKAALAP+ +KP+RVCD
Sbjct: 610 KWVSGNDQSVCSGCRQPFGFTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKPHRVCD 669

Query: 652 DCFTKLKKTDTKLKRTSGYTSVVQSP------RNRTGNVNHKTAELADREAQGPRLQDQL 705
            C+ KLK  +      S +   +  P      R +T  V  + ++          L    
Sbjct: 670 ACYAKLKGCEN--SNASHFNKEITRPSSSVYGREKTERVEVRPSKFL--------LSSAT 719

Query: 706 SILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFS 765
            ++ S  S  ++ S        L+L+D  ++P   +           ++ + +S      
Sbjct: 720 CLVKSLGSTHESSSMAGD---ALQLKDI-IFPGPSSATQ----KASRALIMQQSQAPTPP 771

Query: 766 ASASSSRMSSLATSPVSG-KSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSE 824
            SA+S   S  +  P S  +S S   S   ID  K+ N+ LNQE+ KL+  +  L  K +
Sbjct: 772 PSANSRPASPYSRRPPSPTRSVSPGFSRSLIDSLKKKNEHLNQEVSKLQNHIRSLKQKGD 831

Query: 825 HLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
             + ++    K ++    +A +E+ K + A E IKS+T
Sbjct: 832 MQDIKIRELQKNIEEANLLAGEESSKHREAKEFIKSIT 869


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/870 (45%), Positives = 536/870 (61%), Gaps = 61/870 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E+ LKL+ VS IIPGQRTA F+RY RPEK+Y SFSLIY   +RSLDLICKD+
Sbjct: 94  LIWISHGREKNLKLSSVSHIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDQ 153

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   LKALI+RG   +     ++  +    P  R     P     +F        
Sbjct: 154 AEVEVWFSSLKALISRGERIRRGKSDLSNESVDLIPNDR-----PNAGTLEFA------- 201

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
                S+   G+   + +S+ E+ ++ SR+D+              N   R+S  +  R+
Sbjct: 202 -----SSIARGRFSFESVSH-ESTSSCSRSDT--------------NMPVRTSCGDGSRV 241

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SSV  SSS GS  +D +SLGDV+IWGE   +G    G   +G   S +TD L PK +E
Sbjct: 242 SVSSVSHSSSVGSGLDDIESLGDVYIWGEVWVDGNSSDG---LGSLASCKTDVLTPKPLE 298

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDVH I  G RH  LVT+QGE+F+WGE+SGGRLGHG E D   P L+E L+  NV 
Sbjct: 299 SDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVT 358

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            VACGEYH+CAV+ SGDL+TWGDGT+ +GLLGHG+ VS WIP++VSG L+G+ +  ++CG
Sbjct: 359 FVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACG 418

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WH+A+ TS G LFT GDG FG LGHGD  S + P+EV+ L G +  +V+CGVWH+AA++
Sbjct: 419 TWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAII 478

Query: 420 VATDSSSSSPSGS-TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                    PSGS TS  +LFTWGDGD+ RLGH +KE  L P CVA + + N  QVACG+
Sbjct: 479 EVM-----GPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGY 533

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            ++VALTTSGHV+TMG  AYGQLG P +DG VP  V G++   FVEE++CGA HVA LTS
Sbjct: 534 TMTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTS 593

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S++YTWG+GANG+LGHGD D++ SPT+V+ LKD+ +K + CG  FT+ ICLHKWVS VD
Sbjct: 594 RSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFTSCICLHKWVSGVD 653

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVCS C  PFGF RKR NCY+CGLV+C  CSS+K+ KAALAP+ +KP+RVCD C+ KLK
Sbjct: 654 QSVCSDCRQPFGFTRKRRNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLK 713

Query: 659 KTDTKLKRTSGYTSVVQSPRNRT-GNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQT 717
            +D+     S +   +  P +   G  +    E+       P   + +  L    +NK  
Sbjct: 714 GSDS----ASNFNRDISRPSSSIYGRESFHRGEVRSSRVLLPPTIEPVKYL-EIRTNKPG 768

Query: 718 ES-----RLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
            +     R ++    L+L+D   +P++ +  +  +Y P     +  S       SA+   
Sbjct: 769 STHDSIVRAAQVPTSLQLKDVS-FPISLS-SVQNVYKP----VIQPSQPPTPPTSATPIP 822

Query: 773 MSSLATSPVSGKSSSARS-SAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELE 831
           MS  A  P S   S++   S   ID+ ++ ND LNQE+ K + + + L  KS+  + +++
Sbjct: 823 MSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQEVTKWQNKNQNLEQKSDMQDMKIQ 882

Query: 832 RTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
              K ++   +   +E+ K + A E IKSL
Sbjct: 883 ELQKNIEEAMSQFGEESSKLREAKEFIKSL 912


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/712 (50%), Positives = 465/712 (65%), Gaps = 34/712 (4%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           N + R ++++  R S+SS  S+SSHGSA +D DSLGDV++WGE      +  G   +  S
Sbjct: 77  NMHTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRS 136

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
            + +TD LLPK +ES + LDV+++ CG RHA LVT+ G++F+WGE+SGGRLGHG   D  
Sbjct: 137 -TEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV 195

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           HP+L+E L+  NV+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+    WIP+++S
Sbjct: 196 HPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRIS 255

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G LDG+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S P+EVE+L GL+T
Sbjct: 256 GALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKT 315

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+CGVWHTAA+V    + SSS   S S GKLFTWGDGDK RLGHGDKE RL P CVA 
Sbjct: 316 IAVACGVWHTAAIVEVIVTHSSS---SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVAS 372

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           LID +  +VACGH L+V LTTSG V +MG++ YGQLG P +DG +P  V+  IA   V +
Sbjct: 373 LIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQ 432

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           VACG+YHVA LT  S+V+TWGKGANG+LGHGD ++R  PT V+ LKD+ V+ + CG NFT
Sbjct: 433 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 492

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINK 645
           A ICLHKWVS  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  K
Sbjct: 493 AAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGK 552

Query: 646 PYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAEL-ADREAQGPRLQDQ 704
           PYRVCD CF KLK             S   S   R   V+H   E   D +A    L   
Sbjct: 553 PYRVCDSCFLKLKN-----------ASDSDSFNKRKDIVSHLAGESNGDTKASKTILSSN 601

Query: 705 LSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKF 764
           + I+ S D      S+ ++Q  K +       P   +L   R  +   S  + +S  +  
Sbjct: 602 MDIIRSLD------SKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAV 655

Query: 765 SASASSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKL 812
             SA  S  +S A SP S KSS  RS            S    D+  + N+ LNQEI +L
Sbjct: 656 RTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRL 715

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            AQV+ L  + EH E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 716 HAQVDNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 767


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/708 (50%), Positives = 462/708 (65%), Gaps = 34/708 (4%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R ++++  R S+SS  S+SSHGSA +D DSLGDV++WGE      +  G   +  S + +
Sbjct: 4   RGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRS-TEK 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD LLPK +ES + LDV+++ CG RHA LVT+ G++F+WGE+SGGRLGHG   D  HP+L
Sbjct: 63  TDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+    WIP+++SG LD
Sbjct: 123 VESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALD 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S P+EVE+L GL+T  V+
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS   S S GKLFTWGDGDK RLGHGDKE RL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTHSSS---SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  +VACGH L+V LTTSG V +MG++ YGQLG P +DG +P  V+  IA   V +VACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  S+V+TWGKGANG+LGHGD ++R  PT V+ LKD+ V+ + CG NFTA IC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAEL-ADREAQGPRLQDQLSIL 708
           CD CF KLK                 S   R   V+H   E   D +A    L   + I+
Sbjct: 480 CDSCFLKLKNALDS-----------DSFNKRKDIVSHLAGESNGDTKASKTILSSNMDII 528

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
            S D      S+ ++Q  K +       P   +L   R  +   S  + +S  +    SA
Sbjct: 529 RSLD------SKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSA 582

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
             S  +S A SP S KSS  RS            S    D+  + N+ LNQEI +L AQV
Sbjct: 583 VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + L  + EH E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 643 DNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 690


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/874 (44%), Positives = 538/874 (61%), Gaps = 67/874 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIW S   E+ LKL+ VSRIIPGQRTA F+RY RPEK+Y SFSLIY   +RSLDLICK++
Sbjct: 50  LIWISHGREKNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKNQ 109

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   LKALI+ G   + + GT + S  S           P   P+      GT  
Sbjct: 110 AEVEVWFSSLKALISPG--ERIRRGTSDLSNDS-------VDLIPNDRPY-----AGT-- 153

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
            L+  S+   G+   + +S+ E+ ++ SR+++              N   R+S  +  R+
Sbjct: 154 -LEFASSIARGRFSFESVSH-ESTSSWSRSET--------------NMPVRTSCGDGSRV 197

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANG--FLGGGEHRVGYSFSRQTDALLPKA 237
           S+SSV  SSS GS  +D +SLGDV+IWGE  A+G  F G G     +    +TD L PK 
Sbjct: 198 SVSSVSHSSSVGSGLDDIESLGDVYIWGEVWADGNSFDGLGSQLQAFC---KTDVLTPKP 254

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +ES + LDVH I  G RH  LVT+QGE+F+WGE+SGGRLGHG E D   P L+E L+  N
Sbjct: 255 LESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITN 314

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V  VACGEYH+CAV+ SGDL+TWGDGT+ +GLLGHG+ VS WIP++VSG L+G+ +  ++
Sbjct: 315 VTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVA 374

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG WH+A+ TS G LFTFGDG FG LGHG+  S + P+EV+ L G +  +V+CGVWH+AA
Sbjct: 375 CGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAA 434

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           ++   D S S  S      +LFTWGDGD+ RLGH +KE  L P CVA + + N  QVACG
Sbjct: 435 IIDVMDLSGSKASAK----RLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACG 490

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           + ++VALT SGHV++MG   YGQLG P +DG VP  V  ++   FVEE++CGA HVA LT
Sbjct: 491 YTMTVALTASGHVFSMGGTTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLT 550

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           S S++YTWG+GANG+LGHGD D++ SPTLV+ LKD+ VK + CG  FT+ ICLHKWVS V
Sbjct: 551 SRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGV 610

Query: 598 DHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKL 657
           D SVCS C  PFGF RKRHNCY+CGLV+C  CSS+K+ KAALAP+ +KP+RVCD C+ KL
Sbjct: 611 DQSVCSDCRQPFGFTRKRHNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKL 670

Query: 658 KKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREA--QGPRLQDQLSILSSFDSNK 715
           K +D+             S  NR   ++  ++ +  RE+  +G     ++ +  + +  K
Sbjct: 671 KGSDS------------ASDFNR--EISRPSSSVYGRESFHRGEVRSSRVLLPPTTEPVK 716

Query: 716 QTESRLSKQ-NLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMS 774
             E R +K  N+           V  +LQ+  +  P  S+  A++  K        +  +
Sbjct: 717 YLEIRTNKPGNMHDFSSIVRAAQVPTSLQLKDVAFP-ISLSSAQNVYKPVIQPTPPTPAT 775

Query: 775 SLATSPVSGKSSSARS------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEA 828
            +  SP + +  S         S   ID+ ++ ND LNQ++ K +   + L  KS+  + 
Sbjct: 776 PIPMSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQQVSKWQNNNQNLKQKSDMQDM 835

Query: 829 ELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
           ++    K ++   +   +E+ K + A E+IKSLT
Sbjct: 836 KIRELQKNIEEAVSRVGEESSKLRKAKELIKSLT 869


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/708 (50%), Positives = 462/708 (65%), Gaps = 34/708 (4%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R ++++  R S+SS  S+SSHGSA +D DSLGDV++WGE      +  G   +  S + +
Sbjct: 4   RGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRS-TEK 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD LLPK +ES + LDV+++ CG RHA LVT+ G++F+WGE+SGGRLGHG   D  HP+L
Sbjct: 63  TDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+    WIP+++SG LD
Sbjct: 123 VESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALD 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S P+EVE+L GL+T  V+
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS   S S GKLFTWGDGDK RLGHGDKE RL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTHSSS---SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  +VACGH L+V LTTSG V +MG++ YGQLG P +DG +P  V+  IA   V +VACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  S+V+TWGKGANG+LGHGD ++R  PT V+ LKD+ V+ + CG NFTA IC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAEL-ADREAQGPRLQDQLSIL 708
           CD CF KLK                 S   R   V+H   E   D +A    L   + I+
Sbjct: 480 CDSCFLKLKNALDS-----------DSFNKRKDIVSHLAGESNGDTKASKTILSSNMDII 528

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
            S D      S+ ++Q  K +       P   +L   R  +   S  + +S  +    SA
Sbjct: 529 RSLD------SKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSA 582

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
             S  +S A SP S KSS  RS            S    D+  + N+ LNQEI +L AQV
Sbjct: 583 VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + L  + EH E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 643 DNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 690


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/698 (52%), Positives = 470/698 (67%), Gaps = 31/698 (4%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           GS H +  +LGDV++WGEG+ +G LGGG  R+G   +   DA LPKA+ES + LDV  +A
Sbjct: 258 GSHHAE--ALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVA 315

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
           CG +HA LVTKQGE+F+WGEESGGRLGHG + DVSHPQL+E L+    E+VACGEYH CA
Sbjct: 316 CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCA 375

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           VT SGDLYTWGDGT++ GLLGHG+ +S WIP++V+G L+ + ++ I+CG WHTAVVT+AG
Sbjct: 376 VTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAG 435

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            LFTFGDG+FG LGH D  S   PREVE+L+GLRT R +CGVWHTAAVV     SSS+  
Sbjct: 436 QLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSA-- 493

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
            S S GKLFTWGDGDKGRLGHGDKE RL P CVA L+D N  +VACGH L+VALTT G V
Sbjct: 494 SSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEV 553

Query: 491 YTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           +TMGS+ +GQLG P ADG +P  V+G + +++VE++ACGA+HVA +T  S+VYTWGKGAN
Sbjct: 554 FTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGAN 613

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
           G+LGHGD+++RN+PTLV+ LK+KQVK + CG  FTA +CLHKW+S  D + CS C  PF 
Sbjct: 614 GRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQPFS 673

Query: 611 FRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGY 670
           F RKRHNCYNCGLVFC ACSS+K+LKA+LAP+  KPYRVCD C  KL+K           
Sbjct: 674 FTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAGAS 733

Query: 671 TSVVQSP-RNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLS-KQNLKL 728
            S   +P RNR   V   + +   R  + P+  +      + +  K  E +L  K+  K 
Sbjct: 734 LSKRGAPSRNRGMEVKEGSGKGEFRVPR-PQAPNAGRPPITLEFGKAGEGKLGMKRGKKP 792

Query: 729 ELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKF----------SASASSSRMSSLAT 778
           E   + V PV      G  +   S    A  SK  F          S+S  S R  S A 
Sbjct: 793 ENSSSRVSPVPNGTSGGSTWGAVS--VPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAV 850

Query: 779 SPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHL 826
           SP+S ++S  RS+               ++D K+ ND+L+ E I+LR+ +E L+ + + L
Sbjct: 851 SPLSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSCENIQLRSHIESLSRELQRL 910

Query: 827 EAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + E +R+++QL+    +A +E+ K + A EVIKSLT Q
Sbjct: 911 DGEFQRSAQQLQNAVVMATEESAKSRAAKEVIKSLTTQ 948



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 5/108 (4%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYSG EE++L L+ VS+I+ GQRT  F RYPRP K  QSFSLIY+  +RSLDL   DK
Sbjct: 50  LIWYSGGEEKKLWLSTVSKILSGQRTPVFLRYPRPGKVCQSFSLIYSNEERSLDL---DK 106

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVT 107
           DEA+VW VGLKA +      K KL  IN   S+++    ++++S ++T
Sbjct: 107 DEADVWFVGLKASVAGAQLRKSKLNNINHVGSTNATNHSLKRSSLSLT 154


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/704 (50%), Positives = 461/704 (65%), Gaps = 33/704 (4%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           +++  R S+SS  S+SSHGSA +D DSLGDV++WGE + +         V  S  + TD 
Sbjct: 7   SSDVLRASISSAPSTSSHGSAPDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTGK-TDF 65

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLPK +ES + LDV+++ CG RHA LVT+ GE+F+WGE+SGGRLGHG   D  HP+L+E 
Sbjct: 66  LLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVES 125

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+  N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ V  WIPR++SG L+G+ 
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQ 185

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S PREVE+L GL+T  V+CGV
Sbjct: 186 VAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAA+V    + SS+   + S GKLFTWGDGDK RLGHGDKE RL P CVA LID +  
Sbjct: 246 WHTAAIVEVIVTQSSA---TVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFY 302

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +VACGH L+V LTTSG V+TMG++ YGQLG P +DG  P  V  +I    V +VACG+YH
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVGDKITNEHVLQVACGSYH 361

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V+ LTS S+V+TWGKGANG+LGHGD +++  PTLV+ LKD+ V+ + CG NFTA ICLHK
Sbjct: 362 VSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFTAAICLHK 421

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
           WVS  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  K +RVCD 
Sbjct: 422 WVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVCDS 481

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
           CF+KLK                    + + N     A     E+ G     +  + S+ D
Sbjct: 482 CFSKLKNASD----------------SSSANKKKDLAPHLSGESNGEVRVGKSILPSNMD 525

Query: 713 SNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
             +  +S+ +KQ  K +       P   +L   R  +    I L +S  +    SA  S 
Sbjct: 526 MIRSLDSKAAKQGKKTDALSFLRNPQVSSLMQLRDIAFSGGIDLNRSVPRAVRTSAVRSV 585

Query: 773 MSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELT 820
            SS A SP S KSS  RS            S    D+  + N+ LNQE+ +LRAQV+ L 
Sbjct: 586 TSSRAVSPFSRKSSPPRSTTPIPTTHGLSFSKSATDNLVKTNEFLNQEVERLRAQVDNLR 645

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            + EH E EL +++K+++    +  +E+ + K A EVIKSLT Q
Sbjct: 646 HRCEHHELELHKSAKKVQEAMTLVAEESARSKAAKEVIKSLTAQ 689


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/703 (49%), Positives = 463/703 (65%), Gaps = 40/703 (5%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +  R S+SS  S+SSHGSA +D DSLGDV++WGE + +         V  S  + TD LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTGK-TDFLL 67

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDV+++ CG RHA LVT+ GE+F+WGE+SGGRLGHG   D  HP+L+E L+
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ V  WIPR++SG L+G+ ++
Sbjct: 128 ASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S PREVE+L GL+T  V+CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWH 247

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA+V    + SS+   + S GKLFTWGDGDK RLGHGDKE RL P CVA LID +  +V
Sbjct: 248 TAAIVEVIVTQSSA---TVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRV 304

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG V+TMG++ YGQLG P +DG  P  V+ +IA   V ++ACG+YHVA
Sbjct: 305 ACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVEDKIASEHVLQIACGSYHVA 363

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWGKGANG+LGHGD ++R  PT V+ L+D+ V+ + CG NFTA ICLHKWV
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWV 423

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  K +RVCD C+
Sbjct: 424 SGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVCDSCY 483

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
           +KLK   +   +                       +LA  E+ G     + ++ S+ D  
Sbjct: 484 SKLKNASSSASKK----------------------DLASGESNGEARVGKSNLSSNMDMI 521

Query: 715 KQTESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
           +  +S+ +KQ  K +       P V+  LQ+  I     +     ++ +     A  S  
Sbjct: 522 RSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRSAAPRAVRTPAVRSVA 581

Query: 774 SSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
           +S A SP S KSS  RS            S    D+  + N+ L+QE+ +LRAQV+ L +
Sbjct: 582 TSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLVKANELLSQEVERLRAQVDSLRN 641

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + +H E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 642 RCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 684


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/875 (43%), Positives = 516/875 (58%), Gaps = 98/875 (11%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           L+WYS  +E+ L+L+ VS++IPGQRTA F+R+ RPEK+Y SFSLIY +  RSLDL+CKD+
Sbjct: 45  LVWYSHNKEKCLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQ 104

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L++LIT       +L  +N     D    R+   S  VT +   D      
Sbjct: 105 AEVEVWFSTLESLIT-----SCRLNFLN-----DGQTDRV-SFSEDVTIYQ--DSTSYDT 151

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNS-RADSVSFSPSPLTNAFPDNSNDRSSAAETFR 178
            LD  S+  + ++F +   Y+   + NS RAD  S   + L  +  DNS          R
Sbjct: 152 TLDIASS--ITRSF-NSAGYSTPNSLNSIRADVGSDRVNMLRASTGDNS----------R 198

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+SS  SSSS  S  +D +SLGDV++WGE                              
Sbjct: 199 VSISSAPSSSSQSSGLDDIESLGDVYVWGE------------------------------ 228

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                     IACG+RH  L T+QGE+F+WGEE GGRLGHG + D+  P+L+E L+  NV
Sbjct: 229 ---------QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNV 279

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           E +ACGE+HTC VT SGDLY WGDG+YN+GLLGHG+ VS W+P++VSG L+G+ +  ++C
Sbjct: 280 EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVAC 339

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G WH+A+  S+G LFTFGDG+FG+LGHGD  S + P+EVE L G R  +V+CGVWH+AA+
Sbjct: 340 GSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAI 399

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
           V  +  +S++        KLFTWGDGDK RLGHGDKE +L P CV  L+D N  QVACGH
Sbjct: 400 VEISGQASTNAMSR----KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGH 455

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            ++VAL TSGHV+TMGS+  GQLG P ADG  P  V  ++    VEE++CG+ HVAALTS
Sbjct: 456 SMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTS 515

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            S+VYTWG GANG+LGHG  +++  PTLVD LKD+ VK + CG NFT  IC+HKWVS  D
Sbjct: 516 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGAD 575

Query: 599 HSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK 658
            SVCS C  PFGF RKRHNCYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK
Sbjct: 576 QSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLK 635

Query: 659 KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTE 718
             DT           V S  N+   +  ++ ++ D+  +      +L+  S  +  K  E
Sbjct: 636 AADTG----------VISSYNKRNVITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQE 685

Query: 719 SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLAT 778
           ++    N++ E +      + K  Q+  +   K   F         +  + +        
Sbjct: 686 TK----NVRNETKPADPMSMMKASQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMG 741

Query: 779 SPVSGKSSSARSSA------------VTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHL 826
            P+   S  ++  +            V  D  K+ N+ LNQ+I KL++QV +L  K E  
Sbjct: 742 MPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQ 801

Query: 827 EAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           + +L++  ++ K   ++A +E+ +  T  + +K L
Sbjct: 802 DEQLQKAERKAKQAASMASEESARRNTVLDFVKHL 836


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/708 (49%), Positives = 467/708 (65%), Gaps = 32/708 (4%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           +  +++  R S+SS  S+SSHGSA ++ DSLGDV++WGE + +  +  G   V  S  R 
Sbjct: 4   KGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTGR- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD LLPK +ES + LDV+++ CG +HA LV K GE+F+WGE+SGGRLGHG   D   P+L
Sbjct: 63  TDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV+ VACGE+HTCAVT +G+LY+WGDGT+N GLLGHG+ V  WIP++VSG L+
Sbjct: 123 VESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHGD  S S PREVE+L GL+T  V+
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS S   S GKLFTWGDGDK RLGHGDKE RL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTRSSS-SVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  +VACGH L+VALTTSG V +MG+A YGQLG P +DG +P  V+ +I    V ++ACG
Sbjct: 302 DFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACG 361

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  ++V+TWGKGANG+LGHGD ++R  PTLV+ LKD+ V+ + CG NFTA IC
Sbjct: 362 SYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAIC 421

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            +KWVS  D S CSSC  PFGF RKR NCYNCGLV C AC+SRK+L+AALAPS  KPYRV
Sbjct: 422 QYKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNACTSRKALRAALAPSPGKPYRV 481

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD CF KL              S   +   R   V ++       E+ G     + S+ S
Sbjct: 482 CDSCFLKLNN-----------ASDPNAANRRKDPVPYQPV-----ESNGDAKVGKASLPS 525

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
           + D  +  + + ++Q  K +       P V+  LQ+  I +    + + +S+ +    SA
Sbjct: 526 NMDMIRNLDIKAARQGKKTDGLSFLRNPQVSSLLQLSDI-ALSGGLGMNRSAPRAVRISA 584

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
           + S  +S A SP S K S  RS            S    D+  + ++ LNQE+ +LRAQV
Sbjct: 585 ARSVTTSRAVSPFSRKPSPPRSTTPVPTAHGLSLSKSATDNIVKAHELLNQEVERLRAQV 644

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + L ++ E  E EL++++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 645 DNLRNRCELQELELQKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 692


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/663 (51%), Positives = 449/663 (67%), Gaps = 34/663 (5%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW+S K+E+ L+L+ V++IIPGQRTA F R+  PEK+Y SFSLI+ +  RSLDL+CKD+
Sbjct: 40  LIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ LI+    S  K   IN        + R+   S  VT +   D      
Sbjct: 100 AEVEVWFSALEGLIS----SFRKKSLIN------EHKDRV-SFSEEVTYYQ--DRHSYDS 146

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
            LD  SN  + ++F          N+     + SFS       F   +  R+SAA++ R+
Sbjct: 147 TLDIASN--ISRSF----------NSAGYCGTNSFSFRKSDVGFDRLNMIRTSAADSSRV 194

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +SS S GS  +D +SLGDV++WGE   +     G      S   + D L+PK +E
Sbjct: 195 SISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDGHTSSSCS---KVDVLIPKPLE 251

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV+ IACG RH  L T+QGE+F+WGEE GGRLGHG +AD+S P+L+E LS   V+
Sbjct: 252 SDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD 311

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G++VS W+P+KVSG L+G+ +  ++CG
Sbjct: 312 LISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WH+A+ TS+G L+TFGDG+FG LGHGD  + + P+EVE L G +T +V+CG+WH+AA+V
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIV 431

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
             T+ + ++        KL+TWGDGDK RLGHGDKEPRL P+CV  L++ N  Q+ACGH+
Sbjct: 432 EVTNQTGAN----VMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHN 487

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           ++VAL TSG V+TMGS++ GQLG P +DG  P  V   +A   VEE++CGA HV  LTS 
Sbjct: 488 MTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSR 547

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           S+VYTWG GANG+LGHGD  +R  P LV+ LKD+ VK + CG NFT  IC+HKWVS  D 
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQ 607

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
           SVC+ C   FGF RKRH+CYNCGLV C ACSSRK LKAALAP+  KP+RVCD CF KLK 
Sbjct: 608 SVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKA 667

Query: 660 TDT 662
            +T
Sbjct: 668 AET 670


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/703 (50%), Positives = 464/703 (66%), Gaps = 40/703 (5%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +  R S+SS  S+SSHGSA +D DSLGDV++WGE + +         V  S  + TD LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTGK-TDFLL 67

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDV+++ CG RHA LVT+ GE+F+WGE+SGGRLGHG   D  HP+L+E L+
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ V  WIPR++SG L+G+ ++
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           Y+SCG WHTA++TS G LFTFGDGSFG LGHGD  S S PREVE+L GL+T  V+CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA+V    + SS+   + S GKLFTWGDGDK RLGHGDKE RL P CVA LID +  +V
Sbjct: 248 TAAIVEVIVTQSSA---TVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRV 304

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG V+TMG++ YGQLG   +DG  P  V+ +IA   V ++ACG+YHVA
Sbjct: 305 ACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVA 363

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWGKGANG+LGHGD ++R  PT V+ L+D+ V+ + CG NFTA ICLHKWV
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWV 423

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAPS  K +RVCD C+
Sbjct: 424 SGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCY 483

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
           +KLK                    N + + N K  +LA  E+ G     +  + S+ D  
Sbjct: 484 SKLK--------------------NASSSANKK--DLAPGESNGEARVGKSILSSNMDMI 521

Query: 715 KQTESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
           +  +S+ +KQ  K +       P V+  LQ+  I     +     +  +     A+ S  
Sbjct: 522 RSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPRAARTPAARSVT 581

Query: 774 SSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
           SS A SP S +SS  RS            S    D+  + N+ L+QE+ +LRAQV+ L +
Sbjct: 582 SSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRN 641

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + +H E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 642 RCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 684


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/703 (50%), Positives = 464/703 (66%), Gaps = 40/703 (5%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +  R S+SS  S+SSHGSA +D DSLGDV++WGE + +         V  S  + TD LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTGK-TDFLL 67

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDV+++ CG RHA LVT+ GE+F+WGE+SGGRLGHG   D  HP+L+E L+
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ V  WIPR++SG L+G+ ++
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           Y+SCG WHTA++TS G LFTFGDGSFG LGHGD  S S PREVE+L GL+T  V+CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA+V    + SS+   + S GKLFTWGDGDK RLGHGDKE RL P CVA LID +  +V
Sbjct: 248 TAAIVEVIVTQSSA---TVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRV 304

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG V+TMG++ YGQLG   +DG  P  V+ +IA   V ++ACG+YHVA
Sbjct: 305 ACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVA 363

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWGKGANG+LGHGD ++R  PT V+ L+D+ V+ + CG NFTA ICLHKWV
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWV 423

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAPS  K +RVCD C+
Sbjct: 424 SGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCY 483

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
           +KLK                    N + + N K  +LA  E+ G     +  + S+ D  
Sbjct: 484 SKLK--------------------NASSSANKK--DLAPGESNGEARVGKSILSSNMDMI 521

Query: 715 KQTESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
           +  +S+ +KQ  K +       P V+  LQ+  I     +     +  +     A+ S  
Sbjct: 522 RSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPRAARTPAARSVT 581

Query: 774 SSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
           SS A SP S +SS  RS            S    D+  + N+ L+QE+ +LRAQV+ L +
Sbjct: 582 SSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRN 641

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + +H E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 642 RCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 684


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/703 (50%), Positives = 466/703 (66%), Gaps = 40/703 (5%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +  R S+SS  S+SSHGSA +D DSLGDV++WGE + +         V  S + +TD LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRS-TGKTDFLL 67

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +ES + LDV+++ CG RHA LVT+ GE+F+WGE+SGGRLGHG   D  HP+L+E L+
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ V  WIPR++SG L+G+ ++
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           Y+SCG WHTA++TS G LFTFGDGSFG LGHGD  S S PREVE+L GL+T  V+CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TAA+V    + SS+   + S GKLFTWGDGDK RLGHGDKE RL P CVA LID +  +V
Sbjct: 248 TAAIVEVIVTQSSA---TVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRV 304

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACGH L+V LTTSG V+TMG++ YGQLG   +DG  P  V+ +IA   V ++ACG+YHVA
Sbjct: 305 ACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVA 363

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LTS S+V+TWGKGANG+LGHGD ++R  PT V+ L+D+ V+ + CG NFTA ICLHKWV
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWV 423

Query: 595 SSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCF 654
           S  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAPS  K +RVCD C+
Sbjct: 424 SGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCY 483

Query: 655 TKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSN 714
           +KLK                    N + + N K  +LA  E+ G     +  + S+ D  
Sbjct: 484 SKLK--------------------NASSSANKK--DLAPGESNGEARVGKSILSSNMDMI 521

Query: 715 KQTESRLSKQNLKLELQDNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRM 773
           +  +S+ +KQ  K +       P V+  LQ+  I     +     ++ +     A+ S  
Sbjct: 522 RSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRPAAPRAARTPAARSVT 581

Query: 774 SSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
           SS A SP S +SS  RS            S    D+  + N+ L+QE+ +LRAQV+ L +
Sbjct: 582 SSRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRN 641

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + +H E EL +++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 642 RCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQ 684


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/712 (50%), Positives = 475/712 (66%), Gaps = 44/712 (6%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           + ++++  R+S SS  S+SSHGSA +D+DS GDV++WGE I +  +  G   V  S ++ 
Sbjct: 4   KGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTAK- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D LLPK +ES + LDV+++ CG +HA LVTK GE+F+WGEESGGRLGHG   D  HP+L
Sbjct: 63  ADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV++VACGE+HTCAVT SG+LYTWGDGT+N GLLG+G+ VS WIP+++SG L+
Sbjct: 123 VESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  ++Y+SCG WHTA+VTS G LFTFGDG+FG LGHG+  S S PREVE+L GL+T  V+
Sbjct: 183 GHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV    + SSS   S S GKLFTWGDGDK RLGHGDKEP+L P CVA LID 
Sbjct: 243 CGVWHTAAVVEVIVTQSSS---SMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           + C++ACGH L+V LTTSG V +MG+  YGQLG P +DG +P  ++  + E  V +VACG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIEDIMGEHVV-QVACG 358

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT+ S+V+TWGKGANG+LGHGD ++R  PTLV+ L+D+ V+ + CG NFT+ IC
Sbjct: 359 SYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAIC 418

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            HKWVS  + S C+SC  PFGF RKRHNC+NCGLV C AC+S K L+AALAP+  KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRV 478

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQS-----PRNRTGNVNHKTAELADREAQGPRLQDQ 704
           CD CF KL         ++ Y+S +       PR+ +G  NH  A+LA           +
Sbjct: 479 CDSCFMKLN--------SAAYSSTINKKKEVVPRH-SGESNHD-AKLA-----------R 517

Query: 705 LSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKF 764
             + S+ D  +  +S+ +KQ  K +       P   +L   R  +    I L KS  +  
Sbjct: 518 AIVPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMSSLLQLRDITLSGGIDLNKSVPRAV 577

Query: 765 SASASSSRMSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKL 812
             S  S   SS A SP S K S  RS+           A T  DS  + N+ L+QE+ +L
Sbjct: 578 RTSVRSLN-SSRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERL 636

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           RAQV+ L  + E  E EL++++K+++   ++  +E+ K K A EVIKSLT Q
Sbjct: 637 RAQVDNLRRRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEVIKSLTSQ 688


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/710 (49%), Positives = 471/710 (66%), Gaps = 40/710 (5%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           + ++++  R+S SS  S+SSHGSA +D+DS GDV++WGE I +  +  G   V  S  + 
Sbjct: 4   KGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTGK- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D LLPK +ES + LDV+++ CG +HA LVTK GE+F+WGEESGGRLGHG   D  HP+L
Sbjct: 63  ADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV++VACGE+HTCAVT +G+LYTWGDGT+N GLLG+G+ VS WIP+++SG L+
Sbjct: 123 VESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  ++Y+SCG WHTA+VTS G LFTFGDG+FG LGHG+  S S PREVE+L GL+T  V+
Sbjct: 183 GHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CVA LID 
Sbjct: 243 CGVWHTAAVVEVIVTQSSS---SMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           + C++ACGH L+V LTTSG + +MG+  YGQLG P +DG +P  V+  + E  V +VACG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKLPCLVEDIMGEHVV-QVACG 358

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT+ S+V+TWGKGANG+LGHGD ++R  PTLV+ L+D+ V+ + CG NFT+ IC
Sbjct: 359 SYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAIC 418

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            HKWVS  + S C+SC  PFGF RKRHNC+NCGLV C AC+S K L+AALAP+  KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRV 478

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRN---RTGNVNHKTAELADREAQGPRLQDQLS 706
           CD CF KL         ++ Y+S V   +    R    ++  A+LA           +  
Sbjct: 479 CDSCFMKLN--------SAAYSSAVNKKKEAVPRHSGESNNDAKLA-----------RAI 519

Query: 707 ILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
           + S+ D  +  +S+ +KQ  K +       P   +L   +  +    I + KS  +    
Sbjct: 520 VPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMSSLLQLKDIALSGGIDMNKSVPRAVRT 579

Query: 767 SASSSRMSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRA 814
           S  S   SS A SP S K S  RS+           A T  DS  + N+ L+QE+ +LRA
Sbjct: 580 SVRSLN-SSRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRA 638

Query: 815 QVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           QV+ L  + E  E EL++++K+++   ++  +E+ K K A EVIKSLT Q
Sbjct: 639 QVDNLRHRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEVIKSLTAQ 688


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/707 (49%), Positives = 462/707 (65%), Gaps = 36/707 (5%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           + ++++  R+S SS  S+SSHGSA +D DS GDV++WGE I +  +  G   V  S  R 
Sbjct: 4   KGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTVVRSTVR- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD L PK +ES + LD +++ CG +H+ LVTK GE+F+WGEESGGRLGHG   D  HP+L
Sbjct: 63  TDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE L+  NV++VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG  VS WIP++++G L+
Sbjct: 123 IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++T+ G LFTFGDG+FG LGHG+  S S P+EVE+L GL+T  V+
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS   S S GKLFTWGDGDK RLGHGDKEPRL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTQSSS---SISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  ++ACGH L+V LTTSG V +MG+  YGQLG P +DG +P  V+  + E+ V +VACG
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-QVACG 358

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  S+V+TWGKGANG+LGHGD ++R  PTLV+ L+D+ V+ + CG NFTA IC
Sbjct: 359 SYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAIC 418

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            HKWVS  + S C+SC  PFGF RKRHNC+NCGLV C AC+SRK+++AALAP+  KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRV 478

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD CF KL              + V S      +   K  E   RE+       +  I S
Sbjct: 479 CDSCFLKL-------------NNAVDS------SAISKKKENVLRESNSDGRLTKAIIPS 519

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASAS 769
           + D  +  +S+ +KQ  K +       P   +L   R  +    + L +   +    +A 
Sbjct: 520 NLDMIRSLDSKAAKQGKKTDALSFLRTPQMNSLLQLRDIALSGGLDLNRPVPRAVRTTAV 579

Query: 770 SSRMSSLATSPVSGKSSSARSSAVT------------IDDSKQMNDSLNQEIIKLRAQVE 817
            S  +S A SP S K S  RS+                D+  + N+ LNQE+ +LRAQV+
Sbjct: 580 RSVNTSRAVSPFSRKPSPPRSTTPVPTTHGLSIGKGAADNLAKTNEMLNQEVERLRAQVD 639

Query: 818 ELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            L  + E  E EL++++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 640 NLRHRCEVQELELQKSAKKVQEAMTLVAEESSKSKAAKEVIKSLTAQ 686


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/687 (50%), Positives = 453/687 (65%), Gaps = 59/687 (8%)

Query: 193 AHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
             E+ D  G++++WGEGI +G   G   ++  SF  +TDA LP+AV S + LDV  IACG
Sbjct: 77  GQEEGDVFGELWMWGEGIGDG---GVTKKLDTSF--RTDAFLPRAVRSLVVLDVQQIACG 131

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            RH  LVT+QGE+FSWGEESGGRLGHG +ADV+HPQLI+ L+   V+ VACGEYH+CAVT
Sbjct: 132 VRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVT 191

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
           +SGDLYTWGDGT+N GLLGHG+ +S W P++V G L+G+ +S ++CG WHT +VTS G L
Sbjct: 192 QSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQL 251

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           F+FGDG+FG LGHGD  S S+PREVE+L+GL+T R +CG WHTAAVV     S  S +GS
Sbjct: 252 FSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM--SRYSNAGS 309

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           +  GKLFTWGDGDK RLGHGDKE +L P CVA L+D N  QVACGH L+VALTT+GH+YT
Sbjct: 310 SLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYT 369

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           MGS +YGQLG P A G +P  +   +  + +EEV+CGAYHVAALTS   V TWGKGANG+
Sbjct: 370 MGSVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGR 427

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV--DHSVCSSCHNPFG 610
           LGHGD ++R+ PTLV+ L+DKQVK+V CG +FT+ ICLHK    V   +S+CS C  PFG
Sbjct: 428 LGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNSMCSGCRQPFG 487

Query: 611 FRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGY 670
           F RK+HNCYNCGL +C +CSS+K+L A+ AP+  K +RVCD CF K+ ++   +      
Sbjct: 488 FTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKMSRSSVSV------ 541

Query: 671 TSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLEL 730
                                A +E    R    L + +  D  KQT+ + +K++ + + 
Sbjct: 542 --------------------TAPKENSETRF---LKVQTKGDLFKQTDVKTTKRSKRPD- 577

Query: 731 QDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR 789
             + V P+ N  LQ G + +P +      ++K     S   SR+ S A SP+S + S  R
Sbjct: 578 STSRVSPMPNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVSPLSRRPSPPR 632

Query: 790 SSAVT------------IDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQL 837
           S+               ++  K  N+SL  EI +L+AQVE+LT + E  E EL  +SKQ+
Sbjct: 633 SATPIPTVGGLTSPKHEVEGVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQI 692

Query: 838 KTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +   A+A  E+ KCK A EVI SLT Q
Sbjct: 693 QDAFAVAGAESAKCKAAKEVIMSLTAQ 719


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/700 (49%), Positives = 455/700 (65%), Gaps = 30/700 (4%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           +  +++  R S+SS  S+SSHGSA ++ DSLGDV++WGE + +  +  G   V  S  R 
Sbjct: 4   KGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTGR- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D LLPK +ES + LDV+++ CG +HA LV K GE+F+WGE+SGGRLGHG   D   P+L
Sbjct: 63  IDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV+ VACGE+HTCAVT +G+LYTWGDGTYN GLLGHG+ V  WIP+++SG L+
Sbjct: 123 VESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHGD  S S PREVE+L GL+T  V+
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS S   S GKLFTWGDGDK RLGHGDKE RL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTRSSS-SVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  +VACGH L+VALTTSG V +MG+A YGQLG P +DG +P  V+ +I    V ++ACG
Sbjct: 302 DFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACG 361

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT+ S+V+TWGKGANG+LGHGD ++R  PTLV+ LKD+ V+ + CG NFTA IC
Sbjct: 362 SYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAIC 421

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            +KWVS  D S CSSC  PFGF RKR NCYNCGLV C +C+SRK+L+A+LAPS  KPYRV
Sbjct: 422 QYKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNSCTSRKALRASLAPSPGKPYRV 481

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD CF KL               V   P    G+     A L         +   L I +
Sbjct: 482 CDSCFLKLNNASDPNAANRRKDPVPYQPVESNGDAKVGKASLPSNM----EMIRNLDIKA 537

Query: 710 SFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASAS 769
           ++   K+T+     +N +          V+  LQ+  I +    + + +S+ +    SA+
Sbjct: 538 AWQ-GKKTDGLSFLRNPQ----------VSSLLQLSDI-ALSGGLGMNRSAPRAVHISAA 585

Query: 770 SSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQVE 817
            S  +S A SP S K S  RS            S    D+  + N+ LNQE+ +LRAQV+
Sbjct: 586 RSVTTSRAVSPFSRKPSPPRSTTPVPTAHGLSFSKSATDNIVKANELLNQEVERLRAQVD 645

Query: 818 ELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEV 857
            L ++ E  E EL++++K++     +  +E+ K K A EV
Sbjct: 646 NLRNRCELQELELQKSAKKVLEAMTLVAEESAKSKAAKEV 685


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/699 (49%), Positives = 458/699 (65%), Gaps = 34/699 (4%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           +S ++   RIS+SS +S+SSHGS  ED +S GD+++WGE I +     G  R  YS    
Sbjct: 4   KSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPGTT 63

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD L+PK +ES + LDV  +ACG +HA LVT+Q E+F+WGEE  GRLGHG   +V  P+L
Sbjct: 64  TDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRL 123

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E LS  NVEL+ACGE+HTCAVT +GDLYTWGDGT+N+GLLGHGS VS WIP++VSG LD
Sbjct: 124 VESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLD 183

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ +S +SCG WHTA++TS+G L+TFGDG+FG LGHG+  S S P+EVE+L+GLRT  VS
Sbjct: 184 GLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVS 243

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAAVV    S S++     S GKLFTWGDGDK RLGHGD+  +L P C+  LID 
Sbjct: 244 CGVWHTAAVVEVIISQSNA-----SSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDY 298

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           N  + ACGH L++ LTTSGH++T+GS+ YGQLG P  DG  P  V+ ++    V EVACG
Sbjct: 299 NFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACG 358

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT+  +VYTWGKGANG+LGHGD  +R  PTLV+ L+D+ VKRV CG +FTA IC
Sbjct: 359 SYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAIC 418

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            HKWVS ++ S CS+C  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRV
Sbjct: 419 QHKWVSGMEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 478

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKT-AELADREAQGPRLQDQLSIL 708
           CD C+ KL K            S V   RN    +   T AE  D +A      ++++  
Sbjct: 479 CDSCYVKLSKV---------LDSGVSYSRNTIPRIPGDTKAERIDTKA------NKVAPS 523

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
           SS D  +  + + +KQ  K +        V   LQ+      K   F++    +  S  A
Sbjct: 524 SSSDMIRNLDVKAAKQTKKSDYSSQ----VPAMLQL------KDIPFISAPDLQNSSTVA 573

Query: 769 SSSRMSSLATSP---VSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEH 825
           +     S +T P   +   + S+  S+ + +  +  N+ L QE+ KL+A+V  L  + E 
Sbjct: 574 NQFPYDSRSTLPFLRMPYLNYSSSLSSESSESLRDANELLKQEVQKLQAEVNSLRQEREQ 633

Query: 826 LEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            + EL+++  +      +A +EA K KTA +VIK+LT Q
Sbjct: 634 QDTELKKSEAKAHEAMNLATEEASKLKTAKDVIKALTAQ 672


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/675 (51%), Positives = 439/675 (65%), Gaps = 35/675 (5%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R ++++  R S+SS  S+SSHGSA +D DSLGDV++WGE      +  G   +  S + +
Sbjct: 4   RGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTIIRS-TEK 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD LLPK +ES + LDV+++ CG RHA LVT+ G++F+WGE+SGGRLGHG   D  HP+L
Sbjct: 63  TDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L+  NV+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+    WIP+++SG LD
Sbjct: 123 VESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALD 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++TS G LFTFGDGSFG LGHG+  S S P+EVE+L GL+T  V+
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V    + SSS   S S GKLFTWGDGDK RLGHGDKE RL P CVA LID 
Sbjct: 243 CGVWHTAAIVEVIVTHSSS---SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  +VACGH L+V LTTSG V +MG++ YGQLG P +DG +P  V+  IA   V +VACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  S+V+TWGKGANG+LGHGD ++R  PT V+ LKD+ V+ + CG NFTA IC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHKWVS  D S CSSC  PFGF RKRHNCYNCGLV C AC+SRK+L+AALAP+  KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAEL-ADREAQGPRLQDQLSIL 708
           CD CF KLK                 S   R   V+H   E   D +A    L   + I+
Sbjct: 480 CDSCFLKLKNALDS-----------DSFNKRKDIVSHLAGESNGDTKASKTILSSNMDII 528

Query: 709 SSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASA 768
            S D      S+ ++Q  K +       P   +L   R  +   S  + +S  +    SA
Sbjct: 529 RSLD------SKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSA 582

Query: 769 SSSRMSSLATSPVSGKSSSARS------------SAVTIDDSKQMNDSLNQEIIKLRAQV 816
             S  +S A SP S KSS  RS            S    D+  + N+ LNQEI +L AQV
Sbjct: 583 VRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642

Query: 817 -EELTSKSEHLEAEL 830
              L S   +L+A L
Sbjct: 643 CTSLYSAEINLDALL 657


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/650 (51%), Positives = 441/650 (67%), Gaps = 34/650 (5%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW+S K+E+ L+L+ V++IIPGQRTA F R+  PEK+Y SFSLI+ +  RSLDL+CKD+
Sbjct: 40  LIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQ 99

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
            E EVW   L+ LI+    S  K   IN        + R+   S  VT +   D      
Sbjct: 100 AEVEVWFSALEGLIS----SFRKKSLIN------EHKDRV-SFSEEVTYYQ--DRHSYDS 146

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRI 179
            LD  SN  L        S+  A    +  +S SF  S +   F   +  R+SAA++ R+
Sbjct: 147 TLDIASNISL--------SFNSAGYCGT--NSFSFRKSDV--GFDRLNMIRTSAADSSRV 194

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+SS +SS S GS  +D +SLGDV++WGE   +     G      S   + D L+PK +E
Sbjct: 195 SISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDGHTSSSCS---KVDVLIPKPLE 251

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S + LDV+ IACG RH  L T+QGE+F+WGEE GGRLGHG +AD+S P+L+E LS   V+
Sbjct: 252 SDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD 311

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G++VS W+P+KVSG L+G+ +  ++CG
Sbjct: 312 LISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            WH+A+ TS+G L+TFGDG+FG LGHGD  + + P+EVE L G +T +V+CG+WH+AA+V
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIV 431

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
             T+ + ++        KL+TWGDGDK RLGHGDKEPRL P+CV  L++ +  Q+ACGH+
Sbjct: 432 EVTNQTGAN----VMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHN 487

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           ++VAL TSG V+TMGS++ GQLG P +DG  P  V   +A   VEE++CGA HV  LTS 
Sbjct: 488 MTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSR 547

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           S+VYTWG GANG+LGHGD  +R  P LV+ LKD+ VK + CG NFT  IC+HKWVS  D 
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQ 607

Query: 600 SVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           SVC+ C   FGF RKRH+CYNCGLV C ACSSRK LKAALAP+  KP+R+
Sbjct: 608 SVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRL 657


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/892 (42%), Positives = 532/892 (59%), Gaps = 48/892 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKD 58
            LIWYSG+EE+QL+L+ +++IIPGQRT  FQR  + E+E +SFSL+Y   +RSLDLICKD
Sbjct: 50  FLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKD 109

Query: 59  KDEAEVWLVGLKALITRGTHSKWKLGTI-NC---STSSDSPRARIRKTSPTVTPFDFGDI 114
           K +A+ W +GLKA+I+R  H + +L T  NC    T  +SP    R+        D    
Sbjct: 110 KAQADSWFLGLKAVISRCQHPR-QLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPKF 168

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYT---------EAANTNSRADSVSFSPSPLTNAFPD 165
              +    + + +   + F+D +SY+           +N  +  D VS   SP       
Sbjct: 169 SQVRSLCGSPTQSLSERCFSDGLSYSADSFYSSESSVSNVKNVVD-VSLPSSPYVEPDHL 227

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
              +   A    +  + S V++ SH S   E  D L DV IWGEGI  G LGGG +R G 
Sbjct: 228 KQGEEIYAGTEIQTDMLSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGN 287

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
               Q+DALLPK +EST  LDV  I+ G +HA LVTK GE+F WGE SGG LGH    D+
Sbjct: 288 QNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDM 347

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            +P+++E L+GV V+ V+CGEY TCA+T SG+LYTWGD      L+G   K S WIP ++
Sbjct: 348 GNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL 407

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
           SG L+G  +S ++CG WH A+V+++G LFT+GDG+FG LGHG   S S P+EVE+L GL 
Sbjct: 408 SGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLW 467

Query: 405 TTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
               +CG WHTAA+V V  D    +  G    GKLFTWGDGDKGRLGHGD+E +L P CV
Sbjct: 468 VKAAACGPWHTAAIVEVRADRLKFNTKG----GKLFTWGDGDKGRLGHGDQERKLLPTCV 523

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
           A L+D +  QV+CG  L+V LT  G VYTMGSA +GQLG P A       V G++ + FV
Sbjct: 524 AQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFV 583

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           +E++ G+YHVAALTS   +YTWG GANGQLG GD ++RNSP +V+ L+D+QV+ + CG  
Sbjct: 584 KEISSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSG 643

Query: 584 FTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
           FTA ICLHK +SS D S CS C   FGF RK+HNCYNCGL+FC+ACS++K L A+LAP+ 
Sbjct: 644 FTAAICLHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNK 703

Query: 644 NKPYRVCDDCFTKLK--KTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRL 701
            KP+RVCD C+T L+  K  ++L +   +     +PR           E  DR  +G   
Sbjct: 704 KKPFRVCDPCYTYLQRIKHSSRLLKLENH-----NPRQLLMTQKTSFDEKEDR-GEGTPA 757

Query: 702 QDQLSILSSFDSNKQTESRLSKQNLKLELQDNH-VYPV----NKNLQMGRIYSPKSSIFL 756
           + Q S +     N+ ++S   K+  K ++++   V PV    N   + G++  P    FL
Sbjct: 758 RTQFSSVGQ-PCNEASQS-YEKKPFKNQVENQQTVEPVSSLSNGLPRWGQVPCP----FL 811

Query: 757 AKSSKKKFSASASSSRMSSLATSPVSGKSS---SARSSAVTIDDSKQMNDS---LNQEII 810
            +   ++ S +      + L++ P+  K S   S    +  ++  K   D+   L +E+ 
Sbjct: 812 FEKYCRENSIALVPLSNNQLSSVPLCWKHSPRGSKYMVSTVVNMEKDFPDTDKILIEEVE 871

Query: 811 KLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
           +LR++   L    +    +++   ++L+   ++A +EA KCK A EVIK+L+
Sbjct: 872 RLRSEARSLEKLCQMRSEKIQECQQKLQETWSLAREEAAKCKAAKEVIKALS 923


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/687 (50%), Positives = 454/687 (66%), Gaps = 59/687 (8%)

Query: 193 AHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
             E+ D  G++++WGEGI +G       ++  SF  +TDA LP+AV S + LDV  IACG
Sbjct: 77  GQEEGDVFGELWMWGEGIGDGGG---TKKLDTSF--RTDAFLPRAVRSLVVLDVQQIACG 131

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            RHA LVT+QGE+FSWGEESGGRLGHG +ADV+HPQLI+ L+   V+ VACGEYH+CAVT
Sbjct: 132 VRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVT 191

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
           +SGDLYTWGDGT+N GLLGHG+ +S W P++V G L+G+ +S ++CG WHT +VTS G L
Sbjct: 192 QSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQL 251

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           F+FGDG+FG LGHGD  S S+PREVE+L+GL+T R +CG WHTAAVV     S  S +GS
Sbjct: 252 FSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM--SRYSNAGS 309

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           +  GKLFTWGDGDK RLGHGDKE +L P CVA L+D N  QVACGH L+VALTT+GH+YT
Sbjct: 310 SLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYT 369

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           MGS +YGQLG P A G +P  +   +  + +EEV+CGAYHVAALTS   V TWGKGANG+
Sbjct: 370 MGSVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGR 427

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV--DHSVCSSCHNPFG 610
           LGHGD ++R+ P+LV+ L+DKQVK+V CG +FT+ ICLHK    V   +S+CS C  PFG
Sbjct: 428 LGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNSMCSGCRQPFG 487

Query: 611 FRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGY 670
           F RK+HNCYNCGL +C +CSS+K+L A+ AP+  K +RVCD CF K+ ++   +      
Sbjct: 488 FTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKMSRSSVSV------ 541

Query: 671 TSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLEL 730
                                A +E    R    L + +  D  KQT+ + +K++ + + 
Sbjct: 542 --------------------TAPKENSETRF---LKVQTKGDLFKQTDVKTTKRSKRPD- 577

Query: 731 QDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR 789
             + V P+ N  LQ G + +P +      ++K     S   SR+ S A SP+S + S  R
Sbjct: 578 STSRVSPMPNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVSPLSRRPSPPR 632

Query: 790 SSAVT------------IDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQL 837
           S+               +++ K  N+SL  EI +L+AQVE+LT + E  E EL  +SKQ+
Sbjct: 633 SATPIPTVGGLTSPKHEVEEVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQI 692

Query: 838 KTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +   A+A  E+ KCK A EVI SLT Q
Sbjct: 693 QDAFAVAGAESAKCKAAKEVIMSLTAQ 719


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/692 (49%), Positives = 453/692 (65%), Gaps = 25/692 (3%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           +++  R+S SS  S+SSHGSA +D DS GDV++WGE I    +  G   V  S  R  D 
Sbjct: 22  SSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICENSVRAGSDAVIRSTVRH-DV 80

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLPK +ES + LDV+++ CG +HA LVTK GE+F+WGEESGGRLGHG   D  HP L+E 
Sbjct: 81  LLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVES 140

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+  NV+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG+ +S WIP+++SG L+G  
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ 200

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++Y+SCG WHTA++TS G LFTFGDG+FG LGHG+  S   PREVE+L GL+T  V+CGV
Sbjct: 201 VAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVACGV 260

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           WHTAAVV    + SSS   S S GKLFTWGDGDK RLGHGDKEPR+ P CVA LID +  
Sbjct: 261 WHTAAVVEVIVTQSSS---SISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFH 317

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           ++ACGH L+V LTTSG V+ MG+  YGQLG P +DG +P  V+  + E+ V +VACG+YH
Sbjct: 318 RIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKLPCLVEDIMGENVV-QVACGSYH 376

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           VA LT  S+V+TWGKGANG+LGHGD ++R  PTLV+ L+D+ V+ + CG NFTA IC  K
Sbjct: 377 VAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQRK 436

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
           W+S  + S C+SC  PFGF RKRHNC+NCG V C AC+SRK L+AALAP+  KPYRVCD 
Sbjct: 437 WMSGAEQSQCASCRQPFGFTRKRHNCHNCGHVHCNACTSRKVLRAALAPNPAKPYRVCDS 496

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
           CF KL              +V   PR+ +G  N   A+LA           +  I S+ D
Sbjct: 497 CFLKLNNAIDSSAVNKRKEAV---PRH-SGESN-TDAKLA-----------KAIIPSNLD 540

Query: 713 SNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSR 772
             +  +S+ +KQ  K +       P   +L   R  +      L +  +K     A  S 
Sbjct: 541 MIRSLDSKAAKQGKKTDALSFLRNPQMNSLLQLRDIALSGGFDLNRPVQKTVRTPAVRSP 600

Query: 773 MSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELER 832
               +T+P  G S +  ++    D+  + N+ LNQE+ +LR QV+ L  + E  + EL++
Sbjct: 601 SPPRSTTPTHGLSIAKSAT----DNLTKKNEMLNQEVERLRGQVDNLRHRCELQDLELQK 656

Query: 833 TSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           ++K+++    +  +E+ K K A EVIKSLT Q
Sbjct: 657 SAKKVQEAMTLVAEESGKSKAAKEVIKSLTAQ 688


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  636 bits (1641), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 360/840 (42%), Positives = 499/840 (59%), Gaps = 92/840 (10%)

Query: 28   ATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWLVGLKALI--TRGTHSKWKL 83
            A F+RY RPEK+Y SFSLIY+  DRSLDLICKDK E EVW  GLK+LI   R   +K ++
Sbjct: 1032 AVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSLIRQNRNKQAKSEI 1091

Query: 84   GTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAA 143
              I+ S    + R       P+    DF             +N   G+   D+       
Sbjct: 1092 PEIHDSDCFSTGR-------PSTASIDFAP-----------NNTRRGRTSIDL------- 1126

Query: 144  NTNSRADSVSFSPSPL--TNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLG 201
                    +  SP+    ++   +  N    + + FRIS+SS  S S+  S  +D +SLG
Sbjct: 1127 -------GIQNSPTKFGSSDVGYERGNMLRPSTDGFRISVSSTPSCSTGTSGPDDIESLG 1179

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WGE  ++G                   + P  V ++  + + +IACG RH  LVT+
Sbjct: 1180 DVYVWGEVWSDG-------------------ISPDGVVNSTTVKI-DIACGVRHIALVTR 1219

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            QGE+F+W EE+GGRLGHG + DV  P+L+E L+  N++ VACGEYHTCAV+ SGDL+TWG
Sbjct: 1220 QGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWG 1279

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            DG +N GLLGHGS +S WIP++VSG ++G+ +  ++CG WH+A+ T+ G LFTFGDG+FG
Sbjct: 1280 DGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFG 1339

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHGD  S S P+EV+ L GL+T +V+CGVWHT A+V   + + +    STS  KLFTW
Sbjct: 1340 VLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGT----STSSRKLFTW 1395

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            GDGDK RLGHG+KE  L P CV+ LID N  Q+ACGH  +VALTTSGHV+TMG  ++GQL
Sbjct: 1396 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQL 1455

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G   +DG +P  V   +   FVEE++CG +HVA LTS S+V+TWGKG+NG+LGHGDKD+R
Sbjct: 1456 GSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDR 1515

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNC 621
             +PTLV+ L+++ VK + CG                D SVCS C   FGF RKRHNCYNC
Sbjct: 1516 KTPTLVEALRERHVKSISCG---------------ADQSVCSGCRQAFGFTRKRHNCYNC 1560

Query: 622  GLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRT 681
            GLV C ACSS+K+LKAALAP+  KP+RVCD C+TKLK  +      SGY S V +  + T
Sbjct: 1561 GLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLKAGE------SGYNSNVANRNSTT 1614

Query: 682  GNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKN 741
               +       DR+ +  R      IL S  +     S +     +  +      P    
Sbjct: 1615 PTRSLDGTGRPDRDIRSSR------ILLSPKTEPVKYSEVRSSRSESSIVRASQVPA--- 1665

Query: 742  LQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQM 801
            LQ  R  +  SS+   +++ K  ++S++S+  S   +S +S    S+  S   ID  K+ 
Sbjct: 1666 LQQLRDVAFPSSLSAIQNAFKPVASSSTSTLPSGTRSSRISSPPRSSGFSRGMIDTLKKS 1725

Query: 802  NDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
            N  +N+E+ KL++Q++ L  K ++   E++R  K  +  + +A   + K K A EV+KS+
Sbjct: 1726 NGVINKEMTKLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSV 1785


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 369/894 (41%), Positives = 522/894 (58%), Gaps = 96/894 (10%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND----RSLDLICK 57
           LIWYSG+EE+QL+L+ V +I+ GQRT   Q    P+KE QSFSLIY +    RSLDLICK
Sbjct: 51  LIWYSGQEEKQLRLSLVVKIVTGQRTRQLQ----PDKENQSFSLIYTNGDRARSLDLICK 106

Query: 58  DKDEAEVWLVGLKALITRGTHSKWKLGTIN---CSTSSDSPRARIRKTSPTVTPFDFGDI 114
           DK +A+ W +GL+A+I+R   S+      N     +  +SP   IR+        D  D 
Sbjct: 107 DKAQADSWFIGLRAVISRCHRSRPICVLKNHRGAQSCVNSPAGFIRRKHNLGILED--DT 164

Query: 115 QGTQV------PLDNVSNNGLGKAFADIISYTEAANT------NSRADSVSFSPSPLTNA 162
           + +QV      P  ++S+ G+    +        + +      N     VS+ P    N 
Sbjct: 165 ELSQVRSLSGSPTQSLSDRGISDGLSLSSDSLFFSGSSLPQMQNVEDLLVSYIP----NV 220

Query: 163 FPDN--SNDRSSAAETFRISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGE 219
            P N   N   +A   F+ +    V   +HGS   E  D L DV IWGEG+  G +G  +
Sbjct: 221 EPQNLKKNGSDTAYSEFQKNTCHRVIGLNHGSPRTEKKDILKDVLIWGEGVEVGNIGCVD 280

Query: 220 HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
           ++ GY  ++Q DALLPK +EST+ LDV NI+ G +HA L+TK+GE+F WGE S G+LGH 
Sbjct: 281 NQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK 340

Query: 280 READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
            + DVS P+++E L GV+V+ VACGEY TCA+T SG+LY WG+  Y + L       S W
Sbjct: 341 VDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQW 400

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
           +PR++SG L G+ +  ++CG WHTA+V+S+G LFT+GDGSFG LGHG+ +S S P+EVE+
Sbjct: 401 LPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVES 460

Query: 400 LRGLRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL 458
           L+GL    V+CG WHTAA+V +  D    +  G    GKLFTWGDGDKGRLGH D E +L
Sbjct: 461 LKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVG----GKLFTWGDGDKGRLGHADLEKKL 516

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI 518
            P CVA L++ +  QV+CG  L+VALT +G VYTMGS+ +GQLG P A       V+G++
Sbjct: 517 LPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKL 576

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            E FV+E++ G+YHVAALTS+  +YTWGKG NGQLG G+ ++RN PTLV+ L+D QV+ +
Sbjct: 577 KEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSI 636

Query: 579 VCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAA 638
            CG N TA ICLHK +S  D S C  C  PFGF RK+HNCYNCGL+FC+ACSS+K + A+
Sbjct: 637 ACGSNLTAAICLHKSISVSDQSACKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKVMNAS 696

Query: 639 LAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQG 698
           LAP+ +KP RVCD CF  ++               +  P +R   ++  + E+   E + 
Sbjct: 697 LAPNKSKPSRVCDSCFYSMQN--------------ITHPGHRLQLMSQPSLEIRPGERKT 742

Query: 699 PRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIF--- 755
           PR Q +                  +Q+L+     +   P     Q G++  P  +IF   
Sbjct: 743 PRNQGE-----------------KQQHLETAFSISAGLP-----QWGQVSCP--AIFESC 778

Query: 756 LAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
             K+S+    + +S S   +L                  + DSK+M   L +E+ +LRAQ
Sbjct: 779 YIKNSELPLESKSSISSSLNLEEE---------------LSDSKKM---LIEEVKRLRAQ 820

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQGLNSK 869
              L  + +    ++E     ++    +A +EA K K ANE+IK+L ++ ++ +
Sbjct: 821 ARSLEMQCQTGSQKIEECQLTIEKTWFLAREEAAKRKAANEIIKALALRSMDGR 874


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 329/712 (46%), Positives = 449/712 (63%), Gaps = 36/712 (5%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           N   R+S  + FR S+SS  S SS GS  +D +SLGDV++WGE   +  L  G       
Sbjct: 53  NMQLRTSGGDGFRSSVSSTPSCSSGGSGPDDIESLGDVYVWGEIWTDLVLPDG---TSSQ 109

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
              + D L PK +E+ + LDV  IACG RH  LVT+QGE+F+WGEE GGRLGHG + D S
Sbjct: 110 IPVKNDVLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFS 169

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P L+E L+  +V+ VACGEYHTCA+T S DLYTWGDG +NSG+LGHG+ +S WIP++V 
Sbjct: 170 RPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 229

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G+L+G+ +  ++CG WH+A+ TS G L+TFGDG++G LGHGD  S   PREV+ L GLRT
Sbjct: 230 GSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRT 289

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
            +V+CGVWHTAA+V     + S+     S  KLFTWGDGDK RLGHG+KE  L P CV+ 
Sbjct: 290 IKVACGVWHTAAIVEVMSQTGSN----MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSS 345

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           LID N  Q+ACGH+++VALTTSGHV+TMG  AYGQLG P +DG++P  V   +   FVEE
Sbjct: 346 LIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEE 405

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           ++CGAYH   LTS ++V++WG+G+NG+LGHGD ++R +PTL++ LKD+ VK + CG NFT
Sbjct: 406 ISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFT 465

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINK 645
           A IC+HKWVS  D SVC+ C   FGF RKRHNCYNCGLV C +CSS+K+LKAALAP+  K
Sbjct: 466 ASICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGK 525

Query: 646 PYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQL 705
           P+RVCD C+ KLK  +      +G    V    NR    N ++ +  +R  +G     ++
Sbjct: 526 PHRVCDSCYAKLKSAE------AGNNFCV----NRKLTANRRSTDYKERFDRGDVRPSRI 575

Query: 706 SILSSFDSNKQTE-------SRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK 758
            +  + +  K  E       SR +  ++    Q      V    Q+  I  P S   +  
Sbjct: 576 LLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQ------VPSLQQLKDIAFPSSLSAIQN 629

Query: 759 SSKKKFSASASSSRM-SSLATSPVSGKSSSARS-----SAVTIDDSKQMNDSLNQEIIKL 812
           + +    A  S   M +S   SP + + S  RS     S   ID  K+ N++L Q+  KL
Sbjct: 630 ALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLKKSNETLVQDKSKL 689

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + +V+ L  K +   AE++   K      ++ E+E+ KCK A +++ ++T Q
Sbjct: 690 QREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITEQ 741


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 358/840 (42%), Positives = 503/840 (59%), Gaps = 95/840 (11%)

Query: 28   ATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWLVGLKALI--TRGTHSKWKL 83
            A F+RY RPEK+Y SFSLIY+  DRSLDLICKDK E E+W  GLK+LI   R  H+K ++
Sbjct: 911  AVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEIWFAGLKSLIRQNRNKHAKSEI 970

Query: 84   GTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAA 143
              I+ S    + R       P+    DF             +N   G+   D+       
Sbjct: 971  PEIHDSDCFSTGR-------PSTASIDFAP-----------NNTRRGRTSIDL------- 1005

Query: 144  NTNSRADSVSFSPSPL--TNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLG 201
                    +  SP+    ++   +  N    + + FRIS+SS  S S+  S  +D +SLG
Sbjct: 1006 -------GIQNSPTKFGSSDVGYERGNMLRPSTDGFRISVSSTPSCSTGTSGPDDIESLG 1058

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WGE  ++G    G                      T+ +D   IACG RH  LVT+
Sbjct: 1059 DVYVWGEVCSDGISQDGTVNC-----------------RTVKID---IACGVRHIALVTR 1098

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            QGE+F+WGEE+GGRLGHG + DVS P+L+E L+  N++ VACGEYHTCAV+ SGDL+TWG
Sbjct: 1099 QGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWG 1158

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            DG +N GLLGHGS +S WIP++VSG ++G+ +  ++CG WH+A+ T+ G LFTFGDG+FG
Sbjct: 1159 DGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFG 1218

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHGD  S S P+EV+ L GL+T +V+CGVWHT A+V   + + +    S S  KLFTW
Sbjct: 1219 VLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVMNQTGT----SMSSKKLFTW 1274

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            GDGDK RLGHG+KE  L P CV+ LID N  Q+ACGH L+VALTTSGHV+TMG  ++GQL
Sbjct: 1275 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGTSHGQL 1334

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G   +DG +P  V   +   FVEE++CG +HVA LTS S+V+TWGKG+NG+LGHGDK++R
Sbjct: 1335 GSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDR 1394

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNC 621
             +PTLV+ LK++ VK + C                 D SVCS C   FGF RKRHNCYNC
Sbjct: 1395 KTPTLVEALKERHVKSISCA----------------DQSVCSGCRQAFGFTRKRHNCYNC 1438

Query: 622  GLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRT 681
            GLV C ACSS+K+LKAALAP+  KP+RVCD C+TKLK  +      SGY S V +  + T
Sbjct: 1439 GLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLKAGE------SGYNSNVANRNSTT 1492

Query: 682  GNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKN 741
             +++       DR+ +  ++     +LS      +     S ++    ++ + V      
Sbjct: 1493 RSLDGSVR--PDRDIRSSKI-----LLSPKTEPVKYSEVRSSRSESSIVRASQV----PA 1541

Query: 742  LQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQM 801
            LQ  R  +  SS+   +++ K  +++++S+  S + +S  S    S+  S   ID  K+ 
Sbjct: 1542 LQQLRDVAFPSSLSAIQNALKPAASTSTSTLSSGIRSSRRSSPPRSSGFSRSMIDTLKKS 1601

Query: 802  NDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
            N  +N+E+ +L++Q++ L  K ++   E++R  K  +  + +A   + K K A EV+KS+
Sbjct: 1602 NGVINKEMTRLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSV 1661


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 359/885 (40%), Positives = 522/885 (58%), Gaps = 47/885 (5%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKD 58
            L+WYSG +E+QL+L+ V +IIPG+   +     +  K+ +SFSLIY+  +RSL L CKD
Sbjct: 50  FLVWYSGNQEKQLRLSLVVKIIPGKMLPSLVNQLQITKKLESFSLIYSNCERSLVLTCKD 109

Query: 59  KDEAEVWLVGLKALITRGTHS------KWKLGTINCSTSSDSPRARIRKTSPTVTPFDFG 112
           K +A+ W +GL ++I+R  H       K + G ++C+   +SP   IR+        D  
Sbjct: 110 KAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCA---NSPAGFIRRKYNLGLLEDSA 166

Query: 113 DIQGTQV----PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN 168
           D    +     P  ++S   L    +        ++  S  D +S   +P+  A PD  N
Sbjct: 167 DFPQVRSLCGSPTLSLSERCLSDGLSHSFDSFYPSDGQSEGD-ISAWGTPV--AEPDVLN 223

Query: 169 DRSSAAETF--RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
            R S  ET   + +LS  V+        E  + L DV IWGEGI  G +GGG  R     
Sbjct: 224 -RGSLDETIYEKNALSRFVAPVHTSPYIEKNNILKDVMIWGEGIEGGLIGGGTERSASHK 282

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
               DALLPK +ESTM LDV +I+ G +HA L+TK GEIFSWG+   GRLGH    D+ H
Sbjct: 283 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDH 342

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           P+L++ L+G+  + VACGEY TCA+T++G++YTWGD  + +      +  S W+P+K+SG
Sbjct: 343 PKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSG 402

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L GI +S ++CG WHTAVV++ G LFT+GDG+FGALGHG+ IS S P+EVE+L GL   
Sbjct: 403 PLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVK 462

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            V+CG WHTAA+V   D         ++ GKLFTWGDGDKG+LGHGD E +L P CVAPL
Sbjct: 463 SVACGSWHTAAIV---DIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 519

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
           +D +  QV+CG  L+V LT  G VYTMGS+ +GQLG   +       V+G++ E FV+ +
Sbjct: 520 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAI 579

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           + G+YHVA+LTST +VYTWGKGA+GQLG GD D+RN PT V+ L DKQV+ + CG NFTA
Sbjct: 580 SSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTA 639

Query: 587 IICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKP 646
            ICLH+ ++S D S C  C  PFGF RK+HNCY+CGL FC+ CSS+K+  AALAP+ +K 
Sbjct: 640 AICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCGLYFCRMCSSKKTTNAALAPNKSKA 699

Query: 647 YRVCDDCFTKLKK---TDTKLKRTSGYT--SVVQSPRNRTGNVNHKTAELADREAQGPRL 701
           +RVCD CF  L++    D  LK+ +  T  S+ Q   +    V+ ++          P  
Sbjct: 700 FRVCDPCFNILRRHIHLDRSLKQENTRTQNSLKQQKVSGFERVDKRSMSSKHSPLLSPTK 759

Query: 702 QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAK-SS 760
           Q+   + S +    Q E++          QD   +  +     G++  P S     + ++
Sbjct: 760 QNIDEMQSHWKFINQGENQ----------QDLETFTSSGIPSWGQVSCPASFKMCDRENT 809

Query: 761 KKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQ-MNDSLNQEIIKLRAQVEEL 819
           K  FS S + +  + L          S  SSA+++D      ++ L++E+ +LR +V+ L
Sbjct: 810 KTLFSPSQNQTTANDLV------HLKSPNSSAISLDRFLYGSSEKLSEEVQRLRTEVKNL 863

Query: 820 TSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             +    + ++++  ++++   ++A +EA KCK A E+IK+L ++
Sbjct: 864 ELQCNDGDEKMQKCRQKIEEAWSVAREEAAKCKAAKEIIKALALR 908


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/891 (40%), Positives = 510/891 (57%), Gaps = 70/891 (7%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIWYSG+EE+QLKL+ V +I+ GQRT  FQR  +P+KE+QSFSLIY   +RSLDLICKDK
Sbjct: 56  LIWYSGQEEKQLKLSSVMKIVTGQRTVNFQRQLQPDKEHQSFSLIYAKGERSLDLICKDK 115

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSS----DSPRARIRKTSPTVTPFDFGDIQ 115
            +A+ W +GL+A+I+R  H    L  +    S+    +SP    R+        D  D +
Sbjct: 116 AQADSWFIGLRAVISR-CHRSRPLTALRSHRSAQSCVNSPAGYFRRKHNLGILED--DKE 172

Query: 116 GTQV------PLDNVSNNGLGKAFADI---ISYTEAANTNSRADSVSFSPSPLTNAFPDN 166
            +QV      P  ++S        +        +E++     A  +    SP      + 
Sbjct: 173 FSQVRSLCGSPTPSLSEKCFSDGLSLSSDSFCLSESSLQMHNAVDILVPNSPCVGPILEK 232

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
                 A   F+  +S    + ++G       DSL DV +WGEG+  G +GG   R+G  
Sbjct: 233 CGS-DYACSKFQKDMSFRFVTPAYGCTQIGKNDSLKDVLMWGEGVEGGNIGGMVQRLGNQ 291

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
              Q DAL+PK +EST  LDV +I+ G +HA L+TK+GE+F WG+ S G+LGH    DV 
Sbjct: 292 SVMQVDALVPKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVG 351

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+++E L  V+++ V CGEY TCA+T SG+LYTWGD    + L       S W+P K+ 
Sbjct: 352 MPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLF 411

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G LDGI +S ++CG WHTA+V+ +G LFT+GDG+FG LGHG   S S P+EV +LRGL  
Sbjct: 412 GPLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSV 471

Query: 406 TRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
             V+CG WHTAA+V +  D    +  G    GKLFTWGDGDKGRLGH D E +L P CVA
Sbjct: 472 KSVACGSWHTAAIVDIIADRFKFNAVG----GKLFTWGDGDKGRLGHSDMEKKLVPTCVA 527

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE 524
            L+D +  +V+CG  L+VALT +G VYTMGS+ +GQLG P A     T V+G++ E FV+
Sbjct: 528 KLVDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVK 587

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           E++ G+YHVA LTS   VYTWGKG NGQLG G+ ++RNSPT V+ L+D++V+ + CG N 
Sbjct: 588 EISSGSYHVAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNL 647

Query: 585 TAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSIN 644
           TA ICLHK +S  D S CS C  PFG  RK+HNCYNCGL+FC +CSS+K + A+LAP+ +
Sbjct: 648 TAAICLHKSISVTDQSSCSGCRMPFGLTRKKHNCYNCGLLFCHSCSSKKVINASLAPNKS 707

Query: 645 KPYRVCDDCFTKLKKTDTKLKRTSGYT---SVVQSPRNRTGNVNHKTAELADREAQG--- 698
           KP RVCD C   L+K     + +   T     +  P     N         ++E +G   
Sbjct: 708 KPSRVCDSCLNHLQKVTLSGRMSKPGTHGSKQLLCPNKVLAN---------EKEGKGEAT 758

Query: 699 PRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQM-------GRIYSPK 751
           P      S+  S++ +     R ++++     Q  H + V     +       G++  P 
Sbjct: 759 PPGSHTRSVSQSYNQDSPVSQRKTQKD-----QGEHQHHVETVSSLSAGLPRWGQVSCP- 812

Query: 752 SSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIK 811
             +F +  SK  F               PV  KS+   S+A+ IDD    ++ +   + +
Sbjct: 813 -VVFESYYSKNSF--------------LPVESKSTD--SNAILIDDGMLESNMMLSSVQR 855

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
           L AQV  L  + E  + +++   + ++   ++A +EA K K ANE+IK+LT
Sbjct: 856 LEAQVRNLEMQCEIRDQKIQECRETIERTWSLAREEAAKRKAANEIIKALT 906


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 318/632 (50%), Positives = 422/632 (66%), Gaps = 49/632 (7%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           RH+ +VT+QGE+F+WGEE+GGRLG G   DV+ P+L+E L+   V+LVACGE+HTCAVT 
Sbjct: 247 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G+LYTWGDG +N+GLLG+G+ VS W+P+++SG L+G+ ++Y++CG WHTA+++S G LF
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV--VATDSSSSSPSG 431
           TFGDG+FG LGHGD  S S PREV++L GLRT  V+CGVWHTAAVV  + T SS+S PSG
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSG 426

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                KLFTWGDGDK RLGHGDKEPRL P CV  LID N  ++ACGH +++ LTTSG V+
Sbjct: 427 -----KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVF 481

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
           T+GS+ YGQLG P ADG  P  V+ ++     EEVACGAYHV  LTS ++VYTWGKGANG
Sbjct: 482 TVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 541

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGF 611
           +LGHGD ++R SPTLV+ LKDK VK + CG N++A ICLHK +S  + S CS+C   FGF
Sbjct: 542 RLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGF 601

Query: 612 RRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYT 671
            RKRHNCYNCGLV C +CSS+K+L+AALAP+  K YRVCD C+ KL K     +  S Y 
Sbjct: 602 TRKRHNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVS---ESGSNYR 658

Query: 672 SVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLK---- 727
                 +N    ++ +  +  D+    P      + LS+ D  KQ +S+ +KQ  +    
Sbjct: 659 ------KNAVPRLSGENRDKLDKSDTRP----PKTALSNMDLIKQLDSKAAKQGKRTDTF 708

Query: 728 -----------LELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSL 776
                      L+L+D    P+   + + R+ +PK  I +A         S S S +S  
Sbjct: 709 AVVRPTQAHSLLQLKDG---PIPNTVDIRRL-APK-PIPMANGVN-----SRSVSPLSRR 758

Query: 777 ATSPVSG---KSSSARSSAVTIDDS-KQMNDSLNQEIIKLRAQVEELTSKSEHLEAELER 832
           ++ P SG    ++S  S +  I DS K+ N+ LNQE++ LRAQVE L  + E  E EL +
Sbjct: 759 SSPPRSGTPVPTASGLSFSKGIADSLKKTNELLNQEVLMLRAQVESLRKRCELQELELRK 818

Query: 833 TSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           + K+ +   A+A +E+ K K A EVI SLT Q
Sbjct: 819 SEKKTEEAIAVAAEESAKSKAAKEVITSLTAQ 850



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 151/300 (50%), Gaps = 45/300 (15%)

Query: 201 GDVFIWGEGIAN-GFLGGGEHRVGYSFSRQTDA--LLPKAVESTM-ALDVHNIACGARHA 256
           G+++ WG+G+ N G LG G           TD    +PK +   +  L V  +ACG  H 
Sbjct: 308 GELYTWGDGVHNAGLLGNG-----------TDVSHWMPKRISGILEGLQVAYVACGPWHT 356

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR--- 313
            L++  G++F++G+ + G LGHG +  +S+P+ ++ L+G+    VACG +HT AV     
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIM 416

Query: 314 --------SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
                   SG L+TWGDG  N   LGHG K     P  V   +D  +   I+CG   T  
Sbjct: 417 TQSSTSIPSGKLFTWGDGDKNR--LGHGDKEPRLKPTCVPALID-YNFHKIACGHSITIG 473

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDS 424
           +T++G +FT G   +G LG+  H     P  VE  L G     V+CG +H   +      
Sbjct: 474 LTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVEDKLLGESAEEVACGAYHVMVL------ 526

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   TS  +++TWG G  GRLGHGD E R  P  V  L D+++  +ACG + S A+
Sbjct: 527 --------TSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 365/885 (41%), Positives = 516/885 (58%), Gaps = 61/885 (6%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND----RSLDLICK 57
           LIWYSG+EE+QL+L+ V+ I+PGQRT   Q    P+KE QSFSLIY +     SLDLICK
Sbjct: 51  LIWYSGQEEKQLRLSLVTTIVPGQRTRQLQ----PDKENQSFSLIYTNGDHSSSLDLICK 106

Query: 58  DKDEAEVWLVGLKALITRGTHSKWKLGTIN---CSTSSDSPRARIRKTSPTVTPFDFGDI 114
           D  +A+ W +GL+A+I++  HS+      N     +  +SP   IR+        D  D 
Sbjct: 107 DNAQADSWFIGLRAVISKCHHSRPFCALKNHRVAQSCVNSPAGFIRRKHNLGILED--DT 164

Query: 115 QGTQV------PLDNVSNNGLGKAFADIIS---YTEAANTNSRADSVSFSPSPLTNAFPD 165
           + +QV      P+ ++S+ G     +       ++EA+    +       P    NA P 
Sbjct: 165 ELSQVHSLYGSPMQSISDRGFSDGLSLSSDSLCFSEASLPLLQTVEDFLIPH-TPNAEPQ 223

Query: 166 N--SNDRSSAAETFRISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           N   N   +    F+ ++   +  S+H S   E  D L DV IWGEG   G +G   +  
Sbjct: 224 NIKKNGSDNGFAEFQKNMCHRIIGSNHRSQRTEKNDVLKDVLIWGEGAGGGNIGCVSNHF 283

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           GY  + Q D+LLPK +E T+ LDV NI+ G  HA L+TK+GE+F WGE S G+LGH  + 
Sbjct: 284 GYHSTLQVDSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDM 343

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           DVS P ++E L G  V+ VACGEY TCA+T SG+L+ WG+  Y   L+      S W+PR
Sbjct: 344 DVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPR 403

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           ++SG L G+ +S ++CG WHTA V+S+G LFT+GDG+FG LGHG+  S S P+EVE+L+G
Sbjct: 404 QISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKG 463

Query: 403 LRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
           L    V+CG WHTAA+V V  D    +  G    GKLFTWGDGDKGRLGH D E +L P 
Sbjct: 464 LWVKSVACGSWHTAAIVDVIFDRFKFNGVG----GKLFTWGDGDKGRLGHADLEKKLQPT 519

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES 521
           CVA L++ +  QV+CG  L+VALT +G +YTMGS+ +GQLG P A       V+G++ E 
Sbjct: 520 CVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEE 579

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           FV+E++ G+YHVAALTS   VYTWGKG NGQLG G+ ++RN PTLV+ L+D+QV+ + CG
Sbjct: 580 FVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACG 639

Query: 582 LNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAP 641
            N TA ICLHK +S  D S C  C  PFGF RK+HNCYNCGL+FC+ACSS+K + A+LAP
Sbjct: 640 SNLTAAICLHKSISVSDQSACKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKLINASLAP 699

Query: 642 SINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRL 701
           + +K  RVCD CF  L+     +    G +  + S +     ++ +  E       G RL
Sbjct: 700 NKSKLCRVCDSCFNSLQ----NITHPGGGSRKLLSQQK---ALSDEKEERGGATPPGHRL 752

Query: 702 QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYP-VNKNL-QMGRIYSPKSSIFLAKS 759
           Q    ++S      Q   R + +N   + Q     P ++  L + G++  P  +IF  +S
Sbjct: 753 Q----LMSRPSLESQPGERKTSRNQGEKQQHLETVPSISAGLPRWGQVSCP--AIF--ES 804

Query: 760 SKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEEL 819
             +K S              P+S  SSS        +D  + N+ L +E+ +LRAQ + L
Sbjct: 805 CYRKDSVH---------PLEPISSSSSSLNLE----EDKHESNNILVEEVERLRAQAKGL 851

Query: 820 TSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
             + +    +++   + ++    +A +EA K K AN +IK+L ++
Sbjct: 852 EMQCQTGSQKIQECQQTIEKTWLLAREEAAKRKAANGIIKALVLR 896


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/488 (59%), Positives = 369/488 (75%), Gaps = 5/488 (1%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           + ++++  R+S SS  S+SSHGSA +D DS GDV++WGE I +  +  G   V  S  R 
Sbjct: 4   KGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTVVRSTVR- 62

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD L PK +ES + LD +++ CG +H+ LVTK GE+F+WGEESGGRLGHG   D  HP+L
Sbjct: 63  TDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRL 122

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE L+  NV++VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG  VS WIP++++G L+
Sbjct: 123 IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALE 182

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ ++Y+SCG WHTA++T+ G LFTFGDG+FG LGHG+  S S P+EVE+L GL+T  V+
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CGVWHTAA+V   +   +  S S S GKLFTWGDGDK RLGHGDKEPRL P CVA LID 
Sbjct: 243 CGVWHTAAIV---EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  ++ACGH L+V LTTSG V +MG+  YGQLG P +DG +P  V+  + E+ V +VACG
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-QVACG 358

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +YHVA LT  S+V+TWGKGANG+LGHGD ++R  PTLV+ L+D+ V+ + CG NFTA IC
Sbjct: 359 SYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAIC 418

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
            HKWVS  + S C+SC  PFGF RKRHNC+NCGLV C AC+SRK+++AALAP+  KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRV 478

Query: 650 CDDCFTKL 657
           CD CF KL
Sbjct: 479 CDSCFLKL 486


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 355/881 (40%), Positives = 515/881 (58%), Gaps = 70/881 (7%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKD 58
            L+WYSG +E+QL+L+ V +IIPG+   +     +  K+ +SFSLIY+  +RSL L CKD
Sbjct: 70  FLVWYSGNQEKQLRLSLVVKIIPGKMLPSLVNQLQITKKLESFSLIYSNCERSLVLTCKD 129

Query: 59  KDEAEVWLVGLKALITRGTHS------KWKLGTINCSTSSDSPRARIRKTSPTVTPFDFG 112
           K +A+ W +GL ++I+R  H       K + G ++C+   +SP   IR+        D  
Sbjct: 130 KAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCA---NSPAGFIRRKYNLGLLEDSA 186

Query: 113 DIQGTQV----PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN 168
           D    +     P  ++S   L    +        ++  S  D +S   +P+  A PD  N
Sbjct: 187 DFPQVRSLCGSPTLSLSERCLSDGLSHSFDSFYPSDGQSEGD-ISAWGTPV--AEPDVLN 243

Query: 169 DRSSAAETF--RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
            R S  ET   + +LS  V+        E  + L DV IWGEGI  G +GGG  R     
Sbjct: 244 -RGSLDETIYEKNALSRFVAPVHTSPYIEKNNILKDVMIWGEGIEGGLIGGGTERSASHK 302

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
               DALLPK +ESTM LDV +I+ G +HA L+TK GEIFSWG+   GRLGH    D+ H
Sbjct: 303 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDH 362

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           P+L++ L+G+  + VACGEY TCA+T++G++YTWGD  + +      +  S W+P+K+SG
Sbjct: 363 PKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSG 422

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L GI +S ++CG WHTAVV++ G LFT+GDG+FGALGHG+ IS S P+EVE+L GL   
Sbjct: 423 PLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVK 482

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            V+CG WHTAA+V   D         ++ GKLFTWGDGDKG+LGHGD E +L P CVAPL
Sbjct: 483 SVACGSWHTAAIV---DIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 539

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
           +D +  QV+CG  L+V LT  G VYTMGS+ +GQLG   +       V+G++ E FV+ +
Sbjct: 540 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAI 599

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           + G+YHVA+LTST +VYTWGKGA+GQLG GD D+RN PT V+ L DKQV+ + CG NFTA
Sbjct: 600 SSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTA 659

Query: 587 IICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKP 646
            ICLH+ ++S D S C  C  PFGF RK+HNCY+CGL FC+ CSS+K+  AALAP+ +K 
Sbjct: 660 AICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCGLYFCRMCSSKKTTNAALAPNKSKA 719

Query: 647 YRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLS 706
           +RVCD CF  L++    L R+      ++    RT N       L  ++  G    D+ S
Sbjct: 720 FRVCDPCFNILRR-HIHLDRS------LKQENTRTQN------SLKQQKVSGFERVDKRS 766

Query: 707 ILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
           +     S        +KQN+  E+Q +                     F+ +   ++   
Sbjct: 767 M----SSKHSPLLSPTKQNID-EMQSHWK-------------------FINQGENQQDLE 802

Query: 767 SASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQM---NDSLNQEIIKLRAQVEELTSKS 823
           + +SS +      P  G+ S   S  + I   + +   ++ L++E+ +LR +V+ L  + 
Sbjct: 803 TFTSSGI------PSWGQVSCPASFKIAISLDRFLYGSSEKLSEEVQRLRTEVKNLELQC 856

Query: 824 EHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
              + ++++  ++++   ++A +EA KCK A E+IK+L ++
Sbjct: 857 NDGDEKMQKCRQKIEEAWSVAREEAAKCKAAKEIIKALALR 897


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/703 (45%), Positives = 436/703 (62%), Gaps = 34/703 (4%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           N   R+SA +  R S SS  S+SS GS  +D +S GDV+IWGE  A+GF           
Sbjct: 25  NMQPRASAVDVIRFSASSTPSNSSGGSEADDIESKGDVYIWGEVFADGF----------- 73

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
              +TD L P+ +EST+ LDV +I  G  H  +V+++G++F+WGEESGGRLGHG + D  
Sbjct: 74  -PSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFG 132

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P L+E    V +++VACGE+HT AV++  + +TWGDGT+N GLLGHG+++S WIP+ V+
Sbjct: 133 KPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVN 192

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G LDG+ +  ++CG WH+A+ TS G LFTFGDG+FG LGHGD  S   P+EV+ L GL+T
Sbjct: 193 GFLDGLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKT 252

Query: 406 TRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
            +V+CGVWHTAA++ VA  S S++     S  KLFTWGDGDK RLGHG+K+  L P  V+
Sbjct: 253 VKVACGVWHTAAIIEVAFQSGSNA-----SSWKLFTWGDGDKFRLGHGNKDMYLKPTRVS 307

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE 524
           PLI+ N  Q+ACGH ++VALTTSGHV+TMGS   GQLG P A G VPT V  ++   F+E
Sbjct: 308 PLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIE 367

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           E++CGA+HVAA+TS S++YTWGKG+NG+LGHGD D+R SPTLV  LKD+ +K + CG NF
Sbjct: 368 EISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNF 427

Query: 585 TAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSIN 644
           T+ +C  K+VS  D SVC  C  PFG  R RHNC NCGLVFC  CSS+K++KAA+AP+++
Sbjct: 428 TSCVCNQKYVSGTDQSVCFGCRQPFGLTRIRHNCNNCGLVFCHNCSSKKAIKAAMAPTLD 487

Query: 645 KPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNV--NHKTAELADREAQGPRLQ 702
           KP+RVCD C+TKLK  DT              P    G    +H +    +R  QG    
Sbjct: 488 KPHRVCDTCYTKLKVVDT------------NDPSKFNGKAVPSHCSTTAYERLDQGIIRS 535

Query: 703 DQLSILSSFDSNKQTESRLSKQNLKLELQDN-HVYPVNKNLQMGRIYSPKSSIFLAKSSK 761
            +    S+ +  K  E R  K   + +         V   LQ+  I  P SS+    S  
Sbjct: 536 KRTLFSSTTEPVKYLEIRNHKPGTEHDCTSFVRASLVPSLLQLKDITFP-SSLSSIPSVA 594

Query: 762 KKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTS 821
           K  +  +SS   +S   S  S    + R S   ++  ++ ND LNQ +  L++Q+  L  
Sbjct: 595 KPSTPPSSSQSSTSPNRSSPSPPLINPRFSGGIVNSLRRTNDVLNQRVSDLQSQIRSLEQ 654

Query: 822 KSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           KSE  + E+++  K+     A+   E+     A E I+S   Q
Sbjct: 655 KSEMRDVEIQKLQKKATEAIAMVAVESSSHTEAKEFIESTKHQ 697


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 359/910 (39%), Positives = 514/910 (56%), Gaps = 94/910 (10%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIW SG++E+ L+L+ V++I+ G+     QR    EKE  SFSLIY   + SLDLICKDK
Sbjct: 54  LIWCSGQQEKHLRLSGVTKIVQGEGNIRSQRQNETEKECHSFSLIYANGEHSLDLICKDK 113

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINC---STSSDSPRARIRKTSPTVTPFDFGDIQG 116
            +A  W VGLKA+I+R    K      +C    +   SP   +R+        D    Q 
Sbjct: 114 AQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQSCVSSPSGILRRKKNLGLLDDTS--QF 171

Query: 117 TQV------PLDNVSNNGLGKAFADIISY-TEAANTNSRADSV------SFSPSPLTNAF 163
           TQV      P  ++S     + F+D +SY +E  ++ S   S+      S   SP  N  
Sbjct: 172 TQVHSVCASPTLSLSE----RCFSDGLSYKSEFYSSVSSLSSIHGMTDNSVPSSPYIN-- 225

Query: 164 PD-NSNDRSSAAET-FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG--GE 219
           PD +SN ++S  E  ++  LSS  S     SA    + L DV +WG GI  G L G   E
Sbjct: 226 PDIHSNIKTSRFEKEYKKELSSNRSIMPPASALVGNNVLKDVMVWGGGI--GCLVGIVNE 283

Query: 220 HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
             V  S      +L+PK +EST  LDV N+A G  HA +VTKQGE++ WG+   GRLG  
Sbjct: 284 RFVQNSIY----SLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR 339

Query: 280 READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
            + D+S P++++ LS + V+ VACGEYHTCA+T SG++Y WG+    S L+  G   S W
Sbjct: 340 IDMDISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQW 399

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
           +  K+S  ++GI +S I+CG WHTA+V+S G LFT+GDG+FG LGHG + S S P+EVE+
Sbjct: 400 LTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVES 459

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L+GL    V+CG WHTAA++   + S+     +TS GKLFTWGD D+GRLGH D   +L 
Sbjct: 460 LKGLCVRSVACGTWHTAAII---EISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV 516

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEI 518
           P CV+ L+D +  QV+CG  +++ALT  G V+ MGSA YGQLG P V D  V   V+G +
Sbjct: 517 PTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVV--VEGML 574

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            + +V+ ++CG+YHVA LTS+  VYTWGKG NG+LG GD +NR +P  V+ L+D+QV  +
Sbjct: 575 KQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTI 634

Query: 579 VCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAA 638
            CG +FT  ICLHK +S  D S C+ C  PFGF RK+HNCYNCGL+FC++CSS+K + A+
Sbjct: 635 TCGPSFTVAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVMNAS 694

Query: 639 LAPSINKPYRVCDDCFTKLKKT------DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELA 692
           LAP  +K +RVCD CF + + +      D+   R      + +  +N TG+V     E  
Sbjct: 695 LAPVKSKAFRVCDSCFNRKQGSSEHPAMDSSKSRNYNNQQIQRHHQNMTGDVTEDRGE-- 752

Query: 693 DREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKS 752
                GP L   LS  + +  N  +  ++ K    LE   + +  V   +Q G+   P S
Sbjct: 753 TNVTNGPML--SLS-QTCYRKNMPSGRKVWKSQQDLEDSSSKLGNV---IQCGQGQVPYS 806

Query: 753 SIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKL 812
           + F                            + +   +S V   ++ + +  L +E+ +L
Sbjct: 807 AQF----------------------------RINCTENSVVHETETTKSDKLLMEEVQRL 838

Query: 813 RAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ-------- 864
           RA+ + L  + E    E++   ++++   ++A+DEA KCK A EVIK+L ++        
Sbjct: 839 RAEAKRLEKQCELKNQEIQECQQKVEESWSVAKDEAAKCKAAKEVIKALALRLHTISGKD 898

Query: 865 --GLNSKVGL 872
             GL  K GL
Sbjct: 899 NHGLEQKAGL 908


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 360/901 (39%), Positives = 507/901 (56%), Gaps = 103/901 (11%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIWYSG++E+ L+L+ V++I+ GQ     Q+    EKE  SFSLIY   +RSLDLICKDK
Sbjct: 53  LIWYSGQQEKHLRLSVVTKIVQGQEHIRSQKQNESEKECHSFSLIYANGERSLDLICKDK 112

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINC---STSSDSPRARIRKTSPTVTPFDFGDIQG 116
            +A  W VGLKA+I+R  H +      +C    + + SP   +R+        D    Q 
Sbjct: 113 AQAASWFVGLKAVISRCQHPRAFSSLRSCKGVQSCASSPAGILRRKKNLGLLDDTS--QF 170

Query: 117 TQV------PLDNVSNNGLGKAFADIISYTE---------AANTNSRADSVSFSPSPLTN 161
           TQV      P  ++S     + F+D +S T           +NT+   D+ S   SP  +
Sbjct: 171 TQVHSVCASPTLSLSE----RCFSDGLSCTSDNFYSSSSFLSNTHGVTDN-SVPSSPYID 225

Query: 162 AFPDNSND----RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
             PDN ++    R        +S   ++ S+S      +   L DV IWG GI  G L G
Sbjct: 226 --PDNHSNIESTRIDKEHKKNLSYRYLMHSTSPHVGKNNV--LKDVMIWGGGI--GCLVG 279

Query: 218 GEHRVGYSFSR-QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL 276
               V   F + +  +L+PK +EST  LDVHNIA G +HA L TKQGE+F WG    GRL
Sbjct: 280 ---IVNERFVQPRIYSLVPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRL 336

Query: 277 GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV 336
           G   + D+S P++++ L+G++V+ VACGEYHTCA+T SG++YTWG+    + LL  G   
Sbjct: 337 GQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTR 396

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           S WIP+K+ G+LDGI +S ++CG WHTA+V+S G LFT+GDG+FG LGHGD  S S P+E
Sbjct: 397 SQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKE 456

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           VE+L GLR    +CG WHTAA+V          S S   GKLFTWGDGD+GRLGH D   
Sbjct: 457 VESLSGLRVRSAACGSWHTAAIVEVMFDRFRYNSAS---GKLFTWGDGDEGRLGHVDNGS 513

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG 516
           +L P  V  L+D +  QV+CG  L+VALT  G V+ MGSA YGQLG P A       V+G
Sbjct: 514 KLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKA-VMVEG 572

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           ++ + FV+ ++ G+YHVA LTS   VYTWG+G NGQLG GD ++R +P  V+ L+D+QV 
Sbjct: 573 QLKQEFVKVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVN 632

Query: 577 RVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLK 636
            + CG +FTA I LHK +S  D S C+ C  PFGF RK+HNCY+CGL+FC+ACSS+K   
Sbjct: 633 TITCGPSFTAAISLHKPISISDQSTCTGCRLPFGFTRKKHNCYSCGLLFCRACSSKKITN 692

Query: 637 AALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNV------NHKTAE 690
           A LAPS +K +RVCD CF K +          G T  V + ++R  N        HK A+
Sbjct: 693 APLAPSKSKAFRVCDQCFDKRQ----------GGTHPVMASKSRNHNSQQLLKHQHKIAD 742

Query: 691 LADREA-----QGPRLQ-DQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNL-Q 743
           + +        QGP L   Q     S  S ++     S Q  + +++D+   P+   + Q
Sbjct: 743 VTEDRGETTVTQGPLLSLGQSCYRKSMPSGRKDWK--SNQESQQDVEDSS--PMLGGMPQ 798

Query: 744 MGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMND 803
            G++  P  +IF   S++                             + V   D+ + + 
Sbjct: 799 WGQVPCP--AIFKINSTE-----------------------------NPVAHTDATKSDK 827

Query: 804 SLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTV 863
            L +E+ +LRA+ + L  + E    +++   ++++    +A +EA KCK A EVIK+L +
Sbjct: 828 VLLEEVHRLRAEAKRLEEQCELKNHKIQECQQKIEESWFVAREEAAKCKAAKEVIKALAL 887

Query: 864 Q 864
           +
Sbjct: 888 R 888


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 329/750 (43%), Positives = 458/750 (61%), Gaps = 51/750 (6%)

Query: 130 GKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSS 189
           GK F D IS           DS  +  S        N   R+S  + FR+S SS  S+SS
Sbjct: 97  GKNFVDRIS----------NDSTLYLESSYVGLEHANMQPRASVGDGFRVSASSTPSNSS 146

Query: 190 HGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GS  +D DS   V+IWGE +ANG    G   +G     +TD L+PKA+ES + LDV +I
Sbjct: 147 GGSEPDDIDSFHAVYIWGEVLANGVSPDG---IGTQIPSKTDVLIPKALESNV-LDVCHI 202

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A GA H  + T+QG +F+WG+ESGGRLGHG + D S P L+E L G N E VACGEYHT 
Sbjct: 203 ATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFLEGNNFEFVACGEYHTS 262

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A+++S +LYTWGDGT+N GLLGHGS+ S WIP+ V+G L+G+ +  I+CG WH+A+ TS 
Sbjct: 263 ALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGLQVVSIACGTWHSALATSN 322

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV-VATDSSSSS 428
           G LFTFGDG+FG LGHGD  S   P+EV+ L GL+T +V+CGVWHTAA++ VA  S S+S
Sbjct: 323 GKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVAFQSGSNS 382

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                S  KLFTWGDGD  RLGHG+KE  L P  VAPL++ N  QV CGH++++ALTTSG
Sbjct: 383 -----SSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVECGHNMTIALTTSG 437

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           HV+TMG   +GQLG P++ G +PT V  ++   FVE+++CGA+HVA LT+ S++YTWG G
Sbjct: 438 HVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAILTNKSEIYTWGMG 497

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNP 608
           ANG+LGHGD ++R SPTLV  LKD+ +K V CG NFT+ IC+HKWVS  D S+ +     
Sbjct: 498 ANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCICVHKWVSETDQSIYNGFRQA 557

Query: 609 FGFRRKRHNCYNCGLVFCKACSSRKSLKA-ALAPSINKPYRVCDDCFTKLKKTD----TK 663
           FG  +KRHNC+NCGL    ACSS+K+LKA  L P+  KP+RVCD+C  KLK  +    +K
Sbjct: 558 FGLTKKRHNCHNCGL----ACSSKKTLKATTLTPTPEKPHRVCDNCNVKLKVVNDNGASK 613

Query: 664 LKR--TSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTES-- 719
           L R  T  + S+  + R   G +       + R    P + + +  L   +SN + +   
Sbjct: 614 LDRKVTPSHHSINGNERLGQGTIR------STRTLLSP-ITEPIKYLEIKNSNPKNKFDS 666

Query: 720 ----RLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSS 775
               R S+    ++L+D   +P + +         KS+I LA   +     + S    ++
Sbjct: 667 TSFIRASQVPSHVQLKD-IAFPSSLSSSQ---SVLKSTIPLASPPRTPPPHTNSGPIFTN 722

Query: 776 L-ATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTS 834
               SP   + +S R      ++ ++ ND+LNQE+ KL+ Q++ L  +S+  + E+++ +
Sbjct: 723 TRKQSPT--RLASPRYFGSLNNNLRRTNDALNQEVSKLQNQIQSLKQRSDMQDVEIKKLN 780

Query: 835 KQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           K++    A +  E+       E  +S   Q
Sbjct: 781 KKVVEAIAFSAVESSNHGVTKEFFESTVYQ 810


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 349/903 (38%), Positives = 497/903 (55%), Gaps = 107/903 (11%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLI--YNDRSLDLICKDK 59
           LIWYSG++E+ L+L+ V++I+ GQ     QR    EKE  SFSLI    +RSLDLICKDK
Sbjct: 53  LIWYSGQQEKHLRLSVVTKIVQGQEHIRSQRQNESEKECHSFSLICANGERSLDLICKDK 112

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINC---STSSDSPRARIRK--------------- 101
            +A  W V LKA+I+R  H +      +C    +   SP   +R+               
Sbjct: 113 AQAASWFVALKAVISRCQHPRAFSSLRSCKGVQSCVSSPAGILRRKKNLGLLDDTSQFTQ 172

Query: 102 -----TSPTVTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP 156
                 SPT++  +     G     DN  ++      A  +S T     +S A S    P
Sbjct: 173 VHSVCASPTMSLSERCFSDGLSCTSDNFYSS------ASFLSSTHGVTDSSVASSPYIDP 226

Query: 157 SPLTN--AFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGF 214
               N  +   +   + + ++++ +  ++     S        + L DV IWG GI  G 
Sbjct: 227 DIHGNIESTRIDKEHKKNLSDSYLMHFTTPHVGKS--------NVLKDVMIWGGGI--GC 276

Query: 215 LGGGEHRVGYSFSRQ-TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           L G    V   F      +L+PK +EST  LDVHNIA G +HA LVTKQGE+F WG+   
Sbjct: 277 LVG---IVNERFVHPGIYSLVPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKW 333

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           GRLG   + D+S P++++ L+G++V+ VACGEYHTCA+T SG++YTWG+    + LL  G
Sbjct: 334 GRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEG 393

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
              S WIP+++ G LDGI +S ++CG WHTA+V+S G LFT+GDG+FG LGHGD  S S 
Sbjct: 394 RTRSQWIPQRLGGPLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSS 453

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P+EVE+L GLR    +CG WHTAA+V          S S   GKLFTWGDGD+GRLGH D
Sbjct: 454 PKEVESLNGLRVRSAACGSWHTAAIVEVMFDRFRYNSAS---GKLFTWGDGDEGRLGHVD 510

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
              ++ P  V  L+D +  QV+CG  L+VALT  G V+ MGSA YGQLG P A   V   
Sbjct: 511 NGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVVI- 569

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
           V+G++ + FV+ ++ G+YHVA LTS   VYTWG+G  GQLG GD ++R +P  V+ L+D+
Sbjct: 570 VEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDR 629

Query: 574 QVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRK 633
           QV  + CG +FTA ICLHK +S  D S CS C  PFGF RK+HNCYNCGL+FC+ACSS+K
Sbjct: 630 QVNTITCGPSFTAAICLHKPISISDQSTCSGCRLPFGFTRKKHNCYNCGLLFCRACSSKK 689

Query: 634 SLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNV------NHK 687
              A LAPS +K +RVCD CF          KR  G  SV+ S ++R  N        HK
Sbjct: 690 ITNAPLAPSKSKAFRVCDQCFD---------KRQGGAHSVMAS-KSRNYNTQQVLKHQHK 739

Query: 688 TAELADREA-----QGPRLQ-DQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKN 741
            +++ +        QGP L   Q     S  S ++     + Q ++ +++D+    +   
Sbjct: 740 ISDVTEDRGETTVTQGPMLSLGQSCYRKSMPSGRKDWK--NHQEIQQDVEDSSSM-LGGM 796

Query: 742 LQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQM 801
            Q G++  P  ++F    ++                             + V   D+ + 
Sbjct: 797 PQWGQVPCP--AMFQINCTE-----------------------------NPVVHTDTTKS 825

Query: 802 NDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           +  L +E+ +LRA+ + L  + E    +++   ++++    +A +EA KCK A EVIK+L
Sbjct: 826 DKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIEESWFVAREEAAKCKAAKEVIKAL 885

Query: 862 TVQ 864
            ++
Sbjct: 886 ALR 888


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 355/913 (38%), Positives = 505/913 (55%), Gaps = 97/913 (10%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           L+W SGK+E+ L+L+ V++I+ G+     QR    EKE  S SLIY   +  LDLICKDK
Sbjct: 54  LVWCSGKQEKHLRLSGVTKIVQGEGNIRSQRQNGTEKECHSSSLIYANGEHPLDLICKDK 113

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSS---DSPRARIRKTSPTVTPFDFGDIQG 116
            +A  W VGLKA+I+R    K      +C        SP   +R+        D    Q 
Sbjct: 114 AQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQGCVSSPSGILRRKKNLGLLDDAS--QF 171

Query: 117 TQV------PLDNVSNNGLGKAFADIISYTEAANTNSRADSV-------SFSPSPLTNAF 163
           TQV      P  ++S     + F+D +SY     +++ + S        S   SP  N  
Sbjct: 172 TQVHSVCASPTLSLSE----RCFSDGLSYKSDFYSSASSLSSIHGITDNSVPSSPYIN-- 225

Query: 164 PD-NSNDRSSAAET-FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG--GE 219
           PD +SN ++S  E  ++  LSS  S     SA    + L DV IWG GI  G L G   E
Sbjct: 226 PDIHSNIKTSRFEKEYKKELSSNRSIMPPASALVGNNVLKDVMIWGGGI--GCLVGIVNE 283

Query: 220 HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
             V  S      +L+PK +EST  LDV N+A G  HA +VTKQGE++ WG+   GRLG  
Sbjct: 284 RFVQNSIY----SLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR 339

Query: 280 READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
            + D+S P++++ LS + V+ VACGEYHTCA+T SGD+YTWG  +  S L+  G   S W
Sbjct: 340 IDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSC-SDLVDEGRIRSQW 398

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
           +  K S  ++GI +S I+CG WHTA+V+S G LFT+GDG+FG LGHG++ S S P+EVE+
Sbjct: 399 LTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVES 458

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L+GL    V+CG WHTAA++   + S+     +TS GKLFTWGD D+GRLGH D   +L 
Sbjct: 459 LKGLCVRSVACGTWHTAAII---EVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV 515

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEI 518
           P CV+ L+D +  QV+CG  +++ALT  G V+ MGSA YGQLG P V D  V   V+G +
Sbjct: 516 PTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVV--VEGML 573

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            + +V+ ++CG+YHVA LTS+  VYTWGKG NG+LG GD +NR +P  V+ L+D+QV  +
Sbjct: 574 KQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTI 633

Query: 579 VCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAA 638
            CG +FT  ICLHK +S  D S C+ C  PFGF RK+HNCYNCGL+FC++CSS+K L A+
Sbjct: 634 TCGPSFTVAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVLNAS 693

Query: 639 LAPSINKPYRVCDDCFTKLKKTDTKLK------RTSGYTSVVQSPRNRTGNVNHKTAELA 692
           LAP  +K +RVC+ CF K + +  +        R      + +  +N  G+V     E  
Sbjct: 694 LAPVKSKAFRVCESCFNKKQGSSERSSMDSSKSRNCNNQQIQRHHQNMIGDVTEDRGE-- 751

Query: 693 DREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQ---DNHVYPVNKNLQMGRIYS 749
                GP L      LS     K   S      ++ E Q   ++    +   +Q G+   
Sbjct: 752 TNVTNGPLLS-----LSQTCYRKNMPSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQV 806

Query: 750 PKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEI 809
           P S+ F                            + +   +S V   ++ + +  L +E+
Sbjct: 807 PYSAQF----------------------------RINCTENSVVHETETTKSDKLLIEEV 838

Query: 810 IKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ----- 864
            +LRA+ + L  + E    E++   ++++   ++A++EA KCK A EVIK+L ++     
Sbjct: 839 QRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKEEAAKCKAAKEVIKALALRLHTIS 898

Query: 865 -----GLNSKVGL 872
                GL  K GL
Sbjct: 899 GKDNHGLEQKAGL 911


>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/568 (52%), Positives = 373/568 (65%), Gaps = 49/568 (8%)

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           G K+   +P+ +   +  + +  I+CG  H A+VT  G +F++G+ S G LGHG      
Sbjct: 227 GMKMDSLLPKALESAVV-LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 285

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATD---------------SSSSSPSGST---- 433
            P+ +++L       V+CG +HT AV ++ D                   SPS +T    
Sbjct: 286 HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNC 345

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S GKLFTWGDGDKGRLGHGDKE +L P CVA L+D N C+VACGH L+VALTTSGHVYTM
Sbjct: 346 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTM 405

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           GS  YGQLG P ADG +PTRV+G++A+SFVEE+ACGAYHVA LTS ++VYTWGKGANG+L
Sbjct: 406 GSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRL 465

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
           GHGD D+RNSPTLV+ LKDKQVK + CG NFTA ICLHKWVS VD S+CS C  PF F+R
Sbjct: 466 GHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKR 525

Query: 614 KRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK---TDTKLKRTSGY 670
           KRHNCYNCGLVFC +CSS+KSLKA++AP+ NKPYRVCD+CF+KL+K   TD         
Sbjct: 526 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETD--------- 576

Query: 671 TSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLE 729
            +  QS  +R G  N    EL D+ E    R + QL+  SS +S KQ ESR SK+N KLE
Sbjct: 577 -ASSQSAVSRRGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLE 635

Query: 730 LQDNHVYPV-NKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSA 788
              + V P+ N   Q G      + +F   SSKK FSAS   SR+ S  TSP+S + S  
Sbjct: 636 FNSSRVSPIPNGGSQWGGALKSLNPVF--GSSKKFFSASVPGSRIVSRTTSPISRRPSPP 693

Query: 789 R------------SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQ 836
           R            S  + +DD+K+ NDSL+QE+IKLR QVE LT K++  E ELERT+KQ
Sbjct: 694 RAATPTPTLEGLTSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQ 753

Query: 837 LKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           LK   AIA +E  +CK A EVIKSLT Q
Sbjct: 754 LKEAIAIAGEETARCKAAKEVIKSLTAQ 781



 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/527 (42%), Positives = 283/527 (53%), Gaps = 119/527 (22%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW+SGKEE+ LKL+ VSRII GQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 50  VLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 109

Query: 61  EAEVWLVGLKALITRGT-HSKWKLGTIN--CSTSSDSPRARIRKTSPTVTPF-------- 109
           EAEVW  GLKALI+RG  H KW+  + +    + ++SPR   R++SP  +PF        
Sbjct: 110 EAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQK 169

Query: 110 DFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSND 169
           D GD      P ++   + + KAF+D+I Y                  P    FP     
Sbjct: 170 DGGDHLRLHSPYESPPKSVMEKAFSDVILYA----------------VPPKGFFP----- 208

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
                           S S+ GS H                         HRVG  F  +
Sbjct: 209 ----------------SDSASGSVHS-----------------------FHRVGSCFGMK 229

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D+LLPKA+ES + LDV NIACG RHA LVTKQGEIFSWGEESGGRLGHG ++DV HP+L
Sbjct: 230 MDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKL 289

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN----------------------- 326
           I+ LS  N+ELVACGEYHTCAVT SGDLYTWGDGTYN                       
Sbjct: 290 IDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGK 349

Query: 327 --------SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
                    G LGHG K +  +P  V+  +D  +   ++CG   T  +T++GH++T G  
Sbjct: 350 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVD-PNFCRVACGHSLTVALTTSGHVYTMGSP 408

Query: 379 SFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            +G LG+       +P  VE  L       ++CG +H A +              TS  +
Sbjct: 409 VYGQLGN-PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVL--------------TSRTE 453

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
           ++TWG G  GRLGHGD + R  P  V  L D+ +  +ACG + +  +
Sbjct: 454 VYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 500


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 345/886 (38%), Positives = 489/886 (55%), Gaps = 110/886 (12%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIWYSG+EERQL+L+ V  I+ GQ T  FQ+  + +++ QSFSLIY   + +LDLICKDK
Sbjct: 52  LIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDK 111

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSS------DSPRARIRKT--------SPT 105
            +A+ W  GL+A+IT+  + +    + N  TS       +SP   +R+         +P 
Sbjct: 112 AQADSWFKGLRAVITKHHNIR---NSANLRTSRGAQSCINSPAGFMRRKQNLGLLEETPD 168

Query: 106 VTPFDFGDIQGTQVPL--DNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAF 163
           +T      + G+   L  +   +NGL            + +++S A+S +  P    N  
Sbjct: 169 LT--QIRSLCGSPSTLLEERCLSNGL------------SCSSDSFAESDALGPVSSYNGT 214

Query: 164 P---DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDF---DSLGDVFIWGEGIANGFLGG 217
                NS+   +  E  R S     +S       +     + L D+ IWG     G + G
Sbjct: 215 DYDFRNSDCERTGTELCRFSSQRFAASPPPSIITQPITRSNVLKDIMIWGA--ITGLIDG 272

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
            ++        Q DAL PK +ES    DV +I+ GA+HA LVT+QGE+F WG  + G+LG
Sbjct: 273 SKN--------QNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLG 324

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
                D+ HP+ +E L  V V  VAC ++ TCAVT SG+LY WG    + G +      S
Sbjct: 325 LKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG---IDGGTIEQSG--S 379

Query: 338 CWIPRKVSGNLDG-IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            ++ RK+S  L G + +  ++CG WHTA+VTS+G LFT+G  +FG LGHG   S + P+E
Sbjct: 380 QFLTRKISDVLGGSLSIFSVACGAWHTAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKE 439

Query: 397 VETLRGLRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           VE+LR ++   VSCG WHTAA+V  A D    +   + SCGKLFTWGDGDKGRLGH D +
Sbjct: 440 VESLRRMKVISVSCGPWHTAAIVETAIDRKFYN---AKSCGKLFTWGDGDKGRLGHADNK 496

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD 515
            +L P CV  LID +  +V+CG  L+VAL+ SG VYTMGS+ +GQLG P A       V 
Sbjct: 497 RKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVL 556

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
           G +   FV+++A G++HVA LTS   VYTWGKG NGQLG GD  +RNSP LV+ L D+ V
Sbjct: 557 GNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRLV 616

Query: 576 KRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSL 635
           + + CGLN TA ICLHK +S  D + CSSC + FGF RK+HNCYNCGL+FC ACSS+K++
Sbjct: 617 ESIACGLNLTAAICLHKEISLTDQTACSSCKSAFGFTRKKHNCYNCGLLFCNACSSKKAV 676

Query: 636 KAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADRE 695
            A+LAP+ +K  RVCD CF  L              S+ +  RN               E
Sbjct: 677 NASLAPNKSKLSRVCDSCFDHL-------------WSITEFSRN------------VKTE 711

Query: 696 AQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIF 755
              PR+Q     +S   + K+ E+++  QN+    + +   P     + G++  P    F
Sbjct: 712 NHTPRMQLVTRRVSEDWTEKEAENQM--QNVPQANRFSDGQP-----RWGQVSVPSLFHF 764

Query: 756 LAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQ 815
                  KFS S           SP++   S+ R S+  I  S + N  L +EI +L+A+
Sbjct: 765 ------DKFSTS-----------SPINLSVSARRPSSTKISTSSESNKILIEEIERLKAE 807

Query: 816 VEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           +  L  + E    ++E   ++L     +A++EAEK K A E+IK+L
Sbjct: 808 IRNLQKQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKAL 853


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 345/885 (38%), Positives = 493/885 (55%), Gaps = 107/885 (12%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKDK 59
           LIWYSG+EERQL+L+ V  I+ GQ T  FQ+  + +++ QSFSLIY   + +LDLICKDK
Sbjct: 52  LIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDK 111

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSS------DSPRARIRKT--------SPT 105
            +A+ W  GL+A+IT+  + +    ++N  +S       +SP   +R+         +P 
Sbjct: 112 AQADSWFKGLRAVITKHHNIR---NSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEETPD 168

Query: 106 VTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSP----SPLTN 161
           VT         + +  +   +NGL            + +++S A+S +  P         
Sbjct: 169 VTQIRSLCGSPSTLLEERCLSNGL------------SCSSDSFAESDALGPVSSYYETDY 216

Query: 162 AFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDF---DSLGDVFIWGEGIANGFLGGG 218
            F ++  DRS+ +E  R S     +S       +     + L D+ IWG     G + G 
Sbjct: 217 DFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGA--ITGLIDGS 274

Query: 219 EHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH 278
           ++        Q DAL PK +ES    DV +I+ GA+HA LVT+QGE+F WG  + G+LG 
Sbjct: 275 KN--------QNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGL 326

Query: 279 GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
               D+ HP+ +E L  V V  VAC ++ TCAVT SG+LY WG    + G +      S 
Sbjct: 327 KVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG---IDGGTIEQSG--SQ 381

Query: 339 WIPRKVSGNLDG-IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           ++ RK+S  L G + +  ++CG WHTA+VTS+G LFT+G G+FG LGHG   S + P+EV
Sbjct: 382 FLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEV 441

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           E+LR ++   VSCG WHTAA+V   +        + SCGKLFTWGDGDKGRLGH D + +
Sbjct: 442 ESLRRMKVISVSCGPWHTAAIVETANDRKFY--NAKSCGKLFTWGDGDKGRLGHADSKRK 499

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
           L P CV  LID +  +V+CG  L+VAL+ SG VYTMGS+ +GQLG P A       V G 
Sbjct: 500 LVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGN 559

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
           +   FV+++A G++HVA LTS   VYTWGKG NGQLG GD  +RNSP LV+ L D+ V+ 
Sbjct: 560 LTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVES 619

Query: 578 VVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKA 637
           + CGLN TA ICLHK +S  D + CSSC + FGF R++HNCYNCGL+FC ACSS+K++ A
Sbjct: 620 IACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNA 679

Query: 638 ALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQ 697
           +LAP+ +K  RVCD CF  L              S+ +  RN   + NH           
Sbjct: 680 SLAPNKSKLSRVCDSCFDHL-------------WSITEFSRNVKMD-NHT---------- 715

Query: 698 GPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLA 757
            PR+Q     +S   + KQ+E+ +  QNL    + +   P     + G++  P  S+F  
Sbjct: 716 -PRMQMVTRRVSEDLTEKQSENEM--QNLPQANRSSDGQP-----RWGQVSGP--SLF-- 763

Query: 758 KSSKKKFSASASSSRMSSLATSPVSGKSSSA-RSSAVTIDDSKQMNDSLNQEIIKLRAQV 816
                         R   ++TS     S SA R+S+  I  S + N  L +EI +L+A +
Sbjct: 764 --------------RFDKISTSSSLNLSVSARRTSSTKISTSSESNKILTEEIERLKAVI 809

Query: 817 EELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSL 861
           + L  + E    ++E   ++L     +A++EAEK K A E+IK+L
Sbjct: 810 KNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKAL 854


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 345/891 (38%), Positives = 485/891 (54%), Gaps = 105/891 (11%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKD 58
            LIWYSG+EE+QL+L+ +++IIPGQRT  FQR  + E+E +SFSL+Y   +RSLDLICKD
Sbjct: 50  FLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKD 109

Query: 59  KDEAEVWLVGLKALITRGTHSKWKLGTI-NC---STSSDSPRARIRKTSPTVTPFDFGDI 114
           K +A+ W +GLKA+I+R  H + +L T  NC    T  +SP    R+        D    
Sbjct: 110 KAQADSWFLGLKAVISRCQHPR-QLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPKF 168

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYT---------EAANTNSRADSVSFSPSPLTNAFPD 165
              +    + + +   + F+D +SY+           +N  +  D VS   SP       
Sbjct: 169 SQVRSLCGSPTQSLSERCFSDGLSYSADSFYSSESSVSNVKNVVD-VSLPSSPYVEPDHL 227

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
              +   A    +  + S V++ SH S   E  D L DV IWGEGI  G LGGG +R G 
Sbjct: 228 KQGEEIYAGTEIQTDMLSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGN 287

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
               Q+DALLPK +EST  LDV  I+ G +HA LVTK GE+F WGE SGGRLGH    D+
Sbjct: 288 QNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDM 347

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            +P+++E L+GV V+ V+CGEY TCA+T SG+LYTWGD      L+G   K S WIP ++
Sbjct: 348 GNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL 407

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
           SG L+G  +S ++CG WH A+V+++G LFT+GDG+FG LGHG   S S P+EVE+L GL 
Sbjct: 408 SGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLW 467

Query: 405 TTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
               +CG WHTAA+V V  D    +  G    GKLFTWGDGDKGRLGHGD+E +L P CV
Sbjct: 468 VKAAACGPWHTAAIVEVRADRLKFNTKG----GKLFTWGDGDKGRLGHGDQERKLLPTCV 523

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
           A L+D +  QV+CG  L+V LT  G VYTM     G+LG    D   P  V+ E+    V
Sbjct: 524 AQLVDHDFVQVSCGRMLTVGLTCLGTVYTM-----GRLG-DTEDRNSPAVVE-ELRYRQV 576

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           E +ACG+   AA+                                               
Sbjct: 577 ESIACGSGFTAAI----------------------------------------------- 589

Query: 584 FTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
                CLHK +SS D S CS C   FGF RK+HNCYNCGL+FC+ACS++K L A+LAP+ 
Sbjct: 590 -----CLHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNK 644

Query: 644 NKPYRVCDDCFTKLKKTDTKLKRTSGYTSVV-QSPRNRTGNVNHKTAELADREAQGPRLQ 702
            KP+RVCD C+T L+    ++K +S    +   SPR           E  DR  +G   +
Sbjct: 645 KKPFRVCDPCYTYLQ----RIKHSSRLLKLENHSPRQLLMTQKTSFDEKEDR-GEGTPAR 699

Query: 703 DQLSILSSFDSNKQTESRLSKQNLKLELQDNH-VYPV----NKNLQMGRIYSPKSSIFLA 757
            Q S +     N+ ++S   K+  K ++++   V PV    N   + G++  P    FL 
Sbjct: 700 TQFSSVGQ-PCNEASQS-YEKKPFKNQVENQQTVEPVSSLSNGLPRWGQVPCP----FLF 753

Query: 758 KSSKKKFSASASSSRMSSLATSPVSGKSSSARSS---AVTIDDSKQMNDS---LNQEIIK 811
           +   ++ S +      + L++ P+  K S   S    +  ++  K   D+   L +E+ +
Sbjct: 754 EKYCRENSIALVPLSNNQLSSVPLCWKHSPRGSKYMVSTVVNMEKDFPDTDKILIEEVER 813

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLT 862
           LR++   L    +    +++   ++L+   ++A +EA KCK A EVIK+L+
Sbjct: 814 LRSEARSLEKLCQMRSEKIQECQQKLQETWSLAREEAAKCKAAKEVIKALS 864


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 296/626 (47%), Positives = 388/626 (61%), Gaps = 47/626 (7%)

Query: 263 GEIFSWGEE-SGGRLGHGR-------EADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           G+++ WGE     ++G  +        ADV  P+ +E    ++V  +ACG  H   VTR 
Sbjct: 237 GDVYIWGEVLCSVKVGADKNTSYLSTRADVLLPRPLESNVVLDVHHIACGVRHAAMVTRQ 296

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIP-RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           G+++TWG+ +   G LGHG+      P  ++SG L+G+ ++ ++CG WHTA+VTS G LF
Sbjct: 297 GEVFTWGEES--GGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLF 354

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           TFGDG+FG LGHG+  + + PREVE+L GLRT  V+CGVWHTAAVV    + SSS   S 
Sbjct: 355 TFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQSSS---SA 411

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S GKLFTWGDGDK RLGHGDKEPRL P CV  LID N  ++ACGH L+V LTT+GHV+TM
Sbjct: 412 SSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTM 471

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           GS  YGQLG P ADG VP  V+ ++    VEE+ACGAYHVAALTS ++VYTWGKGANG+L
Sbjct: 472 GSTVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRL 531

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
           GHGD ++R +PT+V+ LKD+ VK + CG N++A IC HKWVS  + S CSSC   FGF R
Sbjct: 532 GHGDGEDRKTPTIVEALKDRHVKYIACGANYSAAICFHKWVSGSEQSQCSSCRQAFGFTR 591

Query: 614 KRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSV 673
           KRHNCYNCGLV C +CSSRK+ +AALAP+ +KPYRVCD CF KL K              
Sbjct: 592 KRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFVKLNKMSEP---------- 641

Query: 674 VQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLK---LEL 730
             S  NR       + E  DR  +      + +  S+ D  KQ +S+ +KQ  K     L
Sbjct: 642 --SNTNRRNAGPRLSGENKDRLDKADLRLSKSTPPSNLDLIKQLDSKAAKQGKKADTFSL 699

Query: 731 QDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARS 790
             +   P    LQ+  +    +     K SK   + S  SSR    + SP S + S  RS
Sbjct: 700 VRSSQAP--SLLQLKDVVLSSAIDLRPKVSKPVLTPSGVSSR----SVSPFSRRPSPPRS 753

Query: 791 SAV-----------TIDDS-KQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLK 838
           +             +I DS K+ N+ LNQE +KLR QVE L  + E  E EL++++K+++
Sbjct: 754 ATPVPTMSGLSFTKSIADSLKKTNELLNQEALKLRTQVESLRQRCEFQELELQKSAKKIQ 813

Query: 839 TVTAIAEDEAEKCKTANEVIKSLTVQ 864
              A+A +E+ K K A +VIKSLT Q
Sbjct: 814 EAMAVAAEESAKSKAAKDVIKSLTAQ 839


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 315/881 (35%), Positives = 482/881 (54%), Gaps = 88/881 (9%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           MLIWYS + E+ L L+ VS ++ GQ+T                           ICKD++
Sbjct: 50  MLIWYSKEREKHLSLSYVSSVVLGQKT---------------------------ICKDRE 82

Query: 61  EAEVWLVGLKALITRGTHSKWKL------GTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
           + E W +GL AL++   +S   L        IN  TSS  P + I++ S   +  D    
Sbjct: 83  QVECWYLGLTALLS-ALYSPLLLVDSTSSRRINSCTSS--PPSYIQQKSRLFSVHDTRKF 139

Query: 115 QGTQVPL----DNVSNNGLGKAFAD----IISYTEAANTNSRADSVSFSPSPLTNAFPDN 166
             TQV        +  N L K+  D     +S  +   ++       F+P  + N   ++
Sbjct: 140 --TQVHSLYGSPRLIQNKLSKSNLDCSEPFVSPRQRTWSDLDFYMEKFTPE-MINRVKNS 196

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAHEDF--DSLGDVFIWGEGIANGFLGGGEHRVGY 224
             D + A       ++ +        +H  +  DSL D+F+WG+ + +        +   
Sbjct: 197 FQDLTVADTIKEQGITQMPKLKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANV 256

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           S        LP+ + ST  LDV N++CG +HA +VTKQGE+FSWG+E GGRLGH     V
Sbjct: 257 S--------LPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 308

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            HP++IE L+  +V+ +A G  HTCA+  SG+L+ WG+GT++ G+     + S W P K+
Sbjct: 309 LHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKL 368

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            G L+G+ +  ++CG WHTA+++S+G LFT+GDG+FG LGHGD  S + P+EVE+L+GLR
Sbjct: 369 FGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLR 428

Query: 405 TTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              V+CG WHTAA+V +     S++PSG     KLFTWGD D+G+LGH DKE +L P CV
Sbjct: 429 VKAVACGPWHTAAIVEILGTVKSNAPSG-----KLFTWGDADRGKLGHSDKESKLVPTCV 483

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
             L D +  QV+C   L+VALT +G V+T+GS  +GQLG    D      V+G +   FV
Sbjct: 484 KALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFV 543

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            E++ G+ HVA LT   KV+TWGKG  GQLG G+  +R+SPTLV+ L+DKQV  + CG N
Sbjct: 544 REISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSN 603

Query: 584 FTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
           FT  +CLH+ +S  D SVCS C   F F RK+HNCYNCG +FC +CS+ K  +AAL P  
Sbjct: 604 FTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCYNCGSMFCNSCSNNKVSRAALGPDR 663

Query: 644 NKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQD 703
           NK YRVCD CFT+L+K +     +S  T  ++        +   T +L+    +   + +
Sbjct: 664 NKRYRVCDACFTQLQKNEECGTVSSRLT--IEKEEAFPTEIRAYTPKLSRIFKEANSIME 721

Query: 704 QLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKK 763
           ++++   +  +++ +   +   L+++             + G++  P S    A++S   
Sbjct: 722 KMALAQGY--HQRNQDLAAPDQLRIQ-------------RWGQVECP-SQFRCARNS--- 762

Query: 764 FSASASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKS 823
                S+S+  ++  S  +  + SA S    +D ++++   L +E+ +L+A V  LT + 
Sbjct: 763 -IPCCSTSKEQTVDESVPAKSAQSASSLKAELDSTEKI---LLEEVKQLQAHVTTLTEQC 818

Query: 824 EHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            +   +++   ++++    I  DEA KCK A E+IK LT Q
Sbjct: 819 RYRSLKVQLCKQKVEETWLIVRDEAAKCKAAKEIIKVLTNQ 859


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 330/886 (37%), Positives = 468/886 (52%), Gaps = 117/886 (13%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN--DRSLDLICKDK 59
           LIWYS + E++L LN VS ++ GQ+T    R   PEKE  S S+IY   + SLDL+    
Sbjct: 53  LIWYSKEREKRLSLNSVSSVVLGQKTTKLLRLHWPEKESHSLSVIYKNGESSLDLVHS-- 110

Query: 60  DEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQV 119
                 L G   LI     +K+    ++CS    SPR                       
Sbjct: 111 ------LYGSPRLI----QNKYLHSNLDCSEPFFSPRQ---------------------- 138

Query: 120 PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFR- 178
                      KA++++ SY E             SP  L N   +N  D  SA ET + 
Sbjct: 139 -----------KAWSELDSYLE-----------KISPE-LVNRVKNNLRDIRSA-ETIKD 174

Query: 179 ---ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLP 235
              I +  +  S    +A    DSL D+F+WG+ +  G +    H    + S      LP
Sbjct: 175 QRIIQMPKLKQSEGSNAA---TDSLKDIFVWGDVL--GRMSDHGHVPATNIS------LP 223

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           + ++S+  L+V +IACG +HA +VTKQG++FSWGEE+GGRLGH     VS P++I+ L+ 
Sbjct: 224 RLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLAS 283

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
             V+ +A G  +TCAV+ SG+LY WG+G ++ G   +  + S W P K+    DGI +  
Sbjct: 284 TPVKTIAFGAKYTCAVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLK 343

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I+CG WHTA+++S G L+T+G G+FG LGHGD  S   P+EVE+LRG R   V+CG WHT
Sbjct: 344 IACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHT 403

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AA+V  + +  SS  G    GKLFTWGD   G+LGH +K+ +L P  V  LID +  QV+
Sbjct: 404 AAIVETSGTLKSSAPG----GKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVS 459

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CG  L+  LT +G V+T+GS  +GQLG   +D      V+G +   FV++++CG+ HVA 
Sbjct: 460 CGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAV 519

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
           LT   KV+TWGKG  GQLG GD  +R+SPTLV+ L+DKQV  + C  NFTA+ C+H+ +S
Sbjct: 520 LTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIACSSNFTAVTCVHREIS 579

Query: 596 SVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT 655
           S D SVCSSC   F F RK+HNCYNCG +FC +CSS K  +AALAP  +K  RVCD CF 
Sbjct: 580 SKDQSVCSSCRLAFRFTRKKHNCYNCGSMFCNSCSSNKVQRAALAPDKSKRCRVCDACFN 639

Query: 656 KLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNK 715
           +L KT    K + G                 + + L +     P+L   L      ++N 
Sbjct: 640 ELNKTAQHGKMSCG------------SKTQKEESSLTETRTYTPKLSRMLK-----EANF 682

Query: 716 QTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSP------KSSIFLAKSSKKKFSASAS 769
             E   S Q+     Q++      +  + G++  P      + +I    +SKK+      
Sbjct: 683 IMEKMGSAQSPNQRNQESATLNQMQRQRWGQVECPDQFKCARDNIPHWLTSKKQTIDVLC 742

Query: 770 SSRMSSLATSPVSGKSSSARSSAVTIDDSKQ--MNDSLNQEIIKLRA---------QVEE 818
             RM    T PVS K+++    A      +Q  M   L +E+ +L+A         QV  
Sbjct: 743 IGRM----TDPVSQKTTAPLPQATNDRRKEQDLMEKILLEEVKQLQAQMVILLLPKQVTT 798

Query: 819 LTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  +  H   +++   ++L+    I +DEA KCK A E+IK LT Q
Sbjct: 799 LAEECRHRSLKVQLYKRKLEETWLIVKDEATKCKAAKEIIKILTNQ 844


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 327/898 (36%), Positives = 476/898 (53%), Gaps = 121/898 (13%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYS   E+ L LN VS +I GQ+T                           IC+D+D+
Sbjct: 50  LVWYSKDREKHLSLNSVSTVILGQKT---------------------------ICRDRDQ 82

Query: 62  AEVWLVGLKALITRGTHSKWK-LGTIN---CSTSSDSPRARIRKTS-------------- 103
           AE W +GL ALI+   HS +  +G+ +    ++ +++PR+ I++ S              
Sbjct: 83  AECWHLGLTALIS--AHSPFSSVGSKSGRQITSCTNTPRSYIQRKSKLSAVHDTPRHKQV 140

Query: 104 ------PTVTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPS 157
                 P +TP DF    G+ +           + F+D+ SY E  N      +      
Sbjct: 141 YPSYGSPKMTPKDFF---GSYLDCSEALFYQRQQTFSDVDSYLEKLNPKVTNPARHGLKD 197

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
            L          +    +TF +  ++              DSL DVF+WG+ + +     
Sbjct: 198 ILVGNKHKTQITQKPNLKTFEVPRAAC-----------RLDSLNDVFLWGDVLGSML--- 243

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
                    S      LP+ V ST  LDV +IACG  HA +VTK GE+FSWG ES   LG
Sbjct: 244 --------DSEDIPKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLG 295

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
           H     VS P+L+E L+ V+V+ VA G  HTCAVT SG+L  W +G +  GLL +  + +
Sbjct: 296 HQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERN 355

Query: 338 CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
            W P K+ G +D I +S I+CG WHTA++TS+G LFT+GDG+FG LGHGD    + P+EV
Sbjct: 356 QWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEV 415

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDS-SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           E+L+GLR   V+CG WHTAAVV  T S + ++PSG     KLFTWGD D+G+LGH DK+ 
Sbjct: 416 ESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSG-----KLFTWGDADRGKLGHADKKI 470

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG 516
           +L P CV  L   +  QV+CG  L+V LT++G V+T+GS+ +GQLG P ADG     V+G
Sbjct: 471 KLVPTCVDLLTSYDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEG 530

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            +   FV E++ G+ HVA LT   +V+TWGKGA+GQLG GD DNR+SPTLV+ L+ + V+
Sbjct: 531 TLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQ 590

Query: 577 RVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLK 636
            + CG NF+A +CLHK +S  D S+CS C   FGF RK+H+CYNCG +FC +CSS K  K
Sbjct: 591 SIACGSNFSAAVCLHKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMFCNSCSSNKIAK 650

Query: 637 AALAPSINKPYRVCDDCFTKLKKT--DTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADR 694
           A      N+ YRVCD CF +L+K    +K K           P+ +    +   AE+   
Sbjct: 651 A----DKNRRYRVCDVCFCQLQKVVDSSKFK-----------PQPKISKGDMFRAEI--- 692

Query: 695 EAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI 754
           +A  P+L          ++N   E   + Q    +  D+ +    K  + G++  P   +
Sbjct: 693 KAYTPKLSRLFK-----EANLIVEKMAAVQGPNQKNVDSAIPIQEKTRRWGQVECPGQFV 747

Query: 755 FLAKSSKKKFS-ASASSSRMSSLATSPVSGKS------SSARSSAVTIDDSKQMNDS-LN 806
               S+++ F     S+++M S++ S     S      +S R S  +  +   M ++ L 
Sbjct: 748 ----SARENFKHQPISNNQMHSVSFSQRMHDSVGLKVGNSLRRSTDSQKEELTMTETMLK 803

Query: 807 QEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +E+ +LR+QV  L  + +      +   ++L     +  DEA KCK A ++IK LT Q
Sbjct: 804 EEVKQLRSQVTALGEQCQQKNLIAQLYKQRLDETWLLVRDEAAKCKAAKDIIKVLTNQ 861


>gi|296086390|emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/402 (65%), Positives = 313/402 (77%), Gaps = 25/402 (6%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           MLIWYSGKEE+QLKLN VSRIIPGQRT  FQRYPRPEKEYQSFSLIY DRSLDLICKDKD
Sbjct: 49  MLIWYSGKEEKQLKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKD 108

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVP 120
           EAEVW +GLK LI+RG + KW+    + S SS+SP +R R+ SP+++  D GD Q TQV 
Sbjct: 109 EAEVWFIGLKGLISRGNYRKWRSEIRDDSISSESPHSRARRISPSLSSSDPGDTQQTQVT 168

Query: 121 LDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRIS 180
            +N+  +GLGKAF+D+ISYT +  + ++A+SV+ S S L++   DNSN R+SA+E FR+S
Sbjct: 169 FENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVS 228

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           LSS VSSSS GS H+DFD+LGDVF+WGEGI +G +G G HRVG S S + DALLPKA+ES
Sbjct: 229 LSSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALES 288

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
           T+ LDVH+IACG +HAVLVTK+GE+FSWGEE G RLGHG E DVSHP+LI+ L G+N+EL
Sbjct: 289 TVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIEL 348

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VACGEYH+CAVT SGDLYTWGDGT+NSGLLGHGS+ S WIP+KVS               
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVS--------------- 393

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
                      LFTFGDG+FGALGHGDH S SIPREVE LRG
Sbjct: 394 ----------QLFTFGDGTFGALGHGDHSSMSIPREVEALRG 425



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 27/164 (16%)

Query: 315 GDLYTWGDGTYNSGLLGHG---------SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
           GD++ WG+G    G++G G         +K+   +P+ +   +  + +  I+CG  H  +
Sbjct: 249 GDVFMWGEGI-GDGIMGAGVHRVGSSSSTKIDALLPKALESTVV-LDVHSIACGGKHAVL 306

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           VT  G +F++G+     LGHG  +  S P+ ++ L G+    V+CG +H+ AV ++    
Sbjct: 307 VTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLS---- 362

Query: 426 SSSPSGSTSCGKLFTWGDG--DKGRLGHGDKEPRLFPECVAPLI 467
                     G L+TWGDG  + G LGHG +     P+ V+ L 
Sbjct: 363 ----------GDLYTWGDGTHNSGLLGHGSEASHWIPKKVSQLF 396



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 52/215 (24%)

Query: 370 GHLFTFGDG-SFGALGHGDH---------ISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           G +F +G+G   G +G G H         I   +P+ +E+   L    ++CG  H  AV+
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKH--AVL 306

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           V            T  G++F+WG+    RLGHG +     P+ +  L   NI  VACG  
Sbjct: 307 V------------TKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEY 354

Query: 480 LSVALTTSGHVYTMGSAAY--GQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S A+T SG +YT G   +  G LG    A   +P +V                      
Sbjct: 355 HSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV---------------------- 392

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
              S+++T+G G  G LGHGD  + + P  V+ L+
Sbjct: 393 ---SQLFTFGDGTFGALGHGDHSSMSIPREVEALR 424



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 434 SCGKLFTWGDG-DKGRLGHG---------DKEPRLFPECVAPLIDENICQVACGHDLSVA 483
           + G +F WG+G   G +G G          K   L P+ +   +  ++  +ACG   +V 
Sbjct: 247 ALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVL 306

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           +T  G V++ G     +LG  V   +   ++   +    +E VACG YH  A+T +  +Y
Sbjct: 307 VTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLY 366

Query: 544 TWGKGAN--GQLGHGDKDNRNSPTLVDFL 570
           TWG G +  G LGHG + +   P  V  L
Sbjct: 367 TWGDGTHNSGLLGHGSEASHWIPKKVSQL 395



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
           D L+P  ++  +    V  +ACG  H   +T   +V++WG+    +LGHG + + + P L
Sbjct: 279 DALLPKALESTVVLD-VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKL 337

Query: 567 VDFLKDKQVKRVVCGLNFTAIICL 590
           +D L    ++ V CG   +  + L
Sbjct: 338 IDALCGMNIELVACGEYHSCAVTL 361


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 323/900 (35%), Positives = 468/900 (52%), Gaps = 121/900 (13%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYS   E+ L LN VS ++ GQ+T                           IC+D+D+
Sbjct: 50  LVWYSKDREKHLSLNSVSTVVLGQKT---------------------------ICRDRDQ 82

Query: 62  AEVWLVGLKALITRGTHSKWKLG------TINCSTSSDSPRARIRKTSPTVTPFD----- 110
           AE W +GL AL T   +S   L        IN  + + SPR+ +++        D     
Sbjct: 83  AECWFLGLTAL-TSSPYSPLPLAGSKSGRQIN--SCAISPRSYLQRKCRLSAALDTPRHT 139

Query: 111 --FGDIQGTQVPLDNVSNNGLGKA----------FADIISYTEAANTNSRADSVSFSPSP 158
             +      ++    +    L  +          F DI SY E  N            +P
Sbjct: 140 QVYPSYGSPKIIQKKIFGGNLDSSEALFYPRHPTFCDIDSYIEKLNPKI--------ATP 191

Query: 159 LTNAFPD--NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLG 216
           + +   D   +N R+       I+ +  + +          DSL DVF+WG  +    LG
Sbjct: 192 VKHGLKDIMVANRRAQ-----NITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLG 245

Query: 217 GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL 276
                     S      LP+ V S   LDV +IACG  HA ++TKQGE+++WG  S GRL
Sbjct: 246 ----------SEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRL 295

Query: 277 GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV 336
                 + S P+++E L+ V+V+ VA G  HTCA+T SG+L+ WG+G ++ GL+      
Sbjct: 296 DQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGR 355

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           + W P K  G +D I +S I+CG WHTA++TS+G LFT+GDG+FG LGHGD    + P+E
Sbjct: 356 NQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKE 415

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           VE+L+G R   V+CG WHTAA+V       SS  G+   GKLFTWGD D+G+LGH D++ 
Sbjct: 416 VESLKGSRVKSVACGPWHTAAIVEVM----SSFKGNAPSGKLFTWGDADRGKLGHADRKM 471

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG 516
           +L P CV  L   ++ QV+CG  ++V LT +G V+T+GS+ +GQLG P ADG     V+G
Sbjct: 472 KLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEG 531

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            +   FV E++ G+ HVA LT + KV+TWGKGA GQLG GD  NR+SPTLV+ L+ + V+
Sbjct: 532 PLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVE 591

Query: 577 RVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLK 636
            VVCG NFTA ICLHK +S  D SVCSSC   FGF RK+HNCYNCG +FC +C+S K   
Sbjct: 592 SVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSSCTSNKITM 651

Query: 637 AALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADRE- 695
           AALAP  N+ YRVCD CF +L+K             VV S ++++  +     E+   E 
Sbjct: 652 AALAPDTNRRYRVCDACFYQLQK-------------VVDSSKDKS-RLKISKGEMFKLEL 697

Query: 696 -AQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSI 754
            A  P+L          ++N   E   S Q      ++       K  + G++  P  ++
Sbjct: 698 KAYTPKLSRLFK-----EANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECP--AL 750

Query: 755 FLAKS--------SKKKFSASASSSRM--SSLATSPVSGKSSSARSSAVTIDDSKQMNDS 804
           F++          S  +  A + S RM  S++  S VS + + A+   + +     M   
Sbjct: 751 FISAQDSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQREEIEM-----MQTE 805

Query: 805 LNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L  ++ +L +QV  LT + +     ++   ++L     +  DEA +CK A ++IK LT Q
Sbjct: 806 LQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQ 865


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 327/893 (36%), Positives = 471/893 (52%), Gaps = 108/893 (12%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYS   E+ L LN VS ++ GQ+T                           IC+D+D+
Sbjct: 50  LVWYSKDREKHLSLNSVSTVVLGQKT---------------------------ICRDRDQ 82

Query: 62  AEVWLVGLKALITRGTHSKWKLG------TINCSTSSDSPRARIRKTSPTVTPFDFGDIQ 115
           AE W +GL AL T   +S   L        IN  + + SPR+ +++        D    +
Sbjct: 83  AECWFLGLTAL-TSSPYSPLPLAGSKSGRQIN--SCAISPRSYLQRKCRLSAALD--TPR 137

Query: 116 GTQVPLDNVSNNGLGKAFADIISYTEAA-----NTNSRADSV--SFSP---SPLTNAFPD 165
            TQV     S     K F   +  +EA       T+   DS     +P   +P+ +   D
Sbjct: 138 HTQVYPSYGSPKIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKIATPVKHGLKD 197

Query: 166 --NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVG 223
              +N R+       I+ +  + +          DSL DVF+WG  +    LG       
Sbjct: 198 IMVANRRAQ-----NITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLG------- 244

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
              S      LP+ V S   LDV +IACG  HA ++TKQGE+++WG  S GRL      +
Sbjct: 245 ---SEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVN 301

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
            S P+++E L+ V+V+ VA G  HTCA+T SG+L+ WG+G ++ GL+      + W P K
Sbjct: 302 ASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHK 361

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
             G +D I +S I+CG WHTA++TS+G LFT+GDG+FG LGHGD    + P+EVE+L+G 
Sbjct: 362 FLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGS 421

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R   V+CG WHTAA+V       SS  G+   GKLFTWGD D+G+LGH D++ +L P CV
Sbjct: 422 RVKSVACGPWHTAAIVEVM----SSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCV 477

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
             L   ++ QV+CG  ++V LT +G V+T+GS+ +GQLG P ADG     V+G +   FV
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFV 537

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            E++ G+ HVA LT + KV+TWGKGA GQLG GD  NR+SPTLV+ L+ + V+ VVCG N
Sbjct: 538 REISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFN 597

Query: 584 FTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
           FTA ICLHK +S  D SVCSSC   FGF RK HNCYNCG +FC +C+S K   AALAP  
Sbjct: 598 FTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDT 657

Query: 644 NKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADRE--AQGPRL 701
           N+ YRVCD CF +L+K             VV S ++++  +     E+   E  A  P+L
Sbjct: 658 NRRYRVCDACFYQLQK-------------VVDSSKDKS-RLKISKGEMFKLELKAYTPKL 703

Query: 702 QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKS-- 759
                     ++N   E   S Q      ++       K  + G++  P  ++F++    
Sbjct: 704 SRLFK-----EANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECP--ALFISAQDS 756

Query: 760 ------SKKKFSASASSSRM--SSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIK 811
                 S  +  A + S RM  S++  S VS + + A+   + +     M   L  ++ +
Sbjct: 757 FQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQREEIEM-----MQTELQGQVKQ 811

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L +QV  LT + +     ++   ++L     +  DEA +CK A ++IK LT Q
Sbjct: 812 LHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQ 864


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 327/893 (36%), Positives = 471/893 (52%), Gaps = 108/893 (12%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           L+WYS   E+ L LN VS ++ GQ+T                           IC+D+D+
Sbjct: 50  LVWYSKDREKHLSLNSVSTVVLGQKT---------------------------ICRDRDQ 82

Query: 62  AEVWLVGLKALITRGTHSKWKLG------TINCSTSSDSPRARIRKTSPTVTPFDFGDIQ 115
           AE W +GL AL T   +S   L        IN  + + SPR+ +++        D    +
Sbjct: 83  AECWFLGLTAL-TSSPYSPLPLAGSKSGRQIN--SCAISPRSYLQRKCRLSAALD--TPR 137

Query: 116 GTQVPLDNVSNNGLGKAFADIISYTEAA-----NTNSRADSV--SFSP---SPLTNAFPD 165
            TQV     S     K F   +  +EA       T+   DS     +P   +P+ +   D
Sbjct: 138 HTQVYPSYGSPKIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKIATPVKHGLKD 197

Query: 166 --NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVG 223
              +N R+       I+ +  + +          DSL DVF+WG  +    LG       
Sbjct: 198 IMVANRRAQ-----NITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLG------- 244

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
              S      LP+ V S   LDV +IACG  HA ++TKQGE+++WG  S GRL      +
Sbjct: 245 ---SEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVN 301

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
            S P+++E L+ V+V+ VA G  HTCA+T SG+L+ WG+G ++ GL+      + W P K
Sbjct: 302 ASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHK 361

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
             G +D I +S I+CG WHTA++TS+G LFT+GDG+FG LGHGD    + P+EVE+L+G 
Sbjct: 362 FLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGS 421

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R   V+CG WHTAA+V       SS  G+   GKLFTWGD D+G+LGH D++ +L P CV
Sbjct: 422 RVKSVACGPWHTAAIVEVM----SSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCV 477

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
             L   ++ QV+CG  ++V LT +G V+T+GS+ +GQLG P ADG     V+G +   FV
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFV 537

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            E++ G+ HVA LT + KV+TWGKGA GQLG GD  NR+SPTLV+ L+ + V+ VVCG N
Sbjct: 538 REISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFN 597

Query: 584 FTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
           FTA ICLHK +S  D SVCSSC   FGF RK HNCYNCG +FC +C+S K   AALAP  
Sbjct: 598 FTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDT 657

Query: 644 NKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADRE--AQGPRL 701
           N+ YRVCD CF +L+K             VV S ++++  +     E+   E  A  P+L
Sbjct: 658 NRRYRVCDACFYQLQK-------------VVDSSKDKS-RLKISKGEMFKLELKAYTPKL 703

Query: 702 QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKS-- 759
                     ++N   E   S Q      ++       K  + G++  P  ++F++    
Sbjct: 704 SRLFK-----EANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECP--ALFISAQDS 756

Query: 760 ------SKKKFSASASSSRM--SSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIK 811
                 S  +  A + S RM  S++  S VS + + A+   + +     M   L  ++ +
Sbjct: 757 FQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQREEIEM-----MQTELQGQVKQ 811

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L +QV  LT + +     ++   ++L     +  DEA +CK A ++IK LT Q
Sbjct: 812 LHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQ 864


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 400/675 (59%), Gaps = 43/675 (6%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           SL D+F+WGE   N    G   +   S        LP+ + +T  +DV ++ACG +HA +
Sbjct: 178 SLKDIFVWGEVPGNVLDHGDVSKANVS--------LPRLLNTTHIIDVQSVACGEKHAAI 229

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           VTKQGE+FSWG ++GGRLGH     VS P++IE L+   V+ +A G  HTCAV+ SG+LY
Sbjct: 230 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 289

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG+GT+  GL G   + S W P K+ G LDGI +  I+CG WHTA+++SAG +FT+GDG
Sbjct: 290 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDG 349

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS-SSSSPSGSTSCGK 437
           +FG LGHGD ++ + P++VE+L+G+R   ++CG WHTAA+V    +  S++PSG     K
Sbjct: 350 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSG-----K 404

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LFTWGD D+G+LGH DK+ +L P CV PL D +  QV+C    ++ LT +G V+T+GS  
Sbjct: 405 LFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKE 464

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           +G+LG P+++      ++G +   FV E++ G+ H+A LT   KV+TWGKG  GQLG GD
Sbjct: 465 HGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGD 524

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHN 617
             +R+ PTLV+ L+DKQV  + CG NFT  ICLH+ +SS D SVCS+C   FGF RK+HN
Sbjct: 525 YVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHN 584

Query: 618 CYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSP 677
           CYNCG +FC +CS+ K  +AALAP  +K YRVCD CF++++K +   K           P
Sbjct: 585 CYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHSKL---------DP 635

Query: 678 RNRTGNVNHKTAELADREAQGPRL-QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVY 736
           + +         E+     +  R+ ++  +I+    S +    R   QNL +    +HV 
Sbjct: 636 QQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQR--SQNLAVP---DHV- 689

Query: 737 PVNKNLQMGRIYSP-------KSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR 789
              + L+ G +  P       +S  + +  +K+  S S       ++A  P S    SA 
Sbjct: 690 ---RTLRWGLVECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSAN 746

Query: 790 SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAE 849
            S   +D    M + L +E+ +L+ QV  L  +      +++   ++++    IA+DEA 
Sbjct: 747 DSKAELD---LMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAA 803

Query: 850 KCKTANEVIKSLTVQ 864
           KCK A ++IK L  Q
Sbjct: 804 KCKAAKDIIKVLIDQ 818



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 13/167 (7%)

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKE------PRLFPECVAPLIDENICQVACGHDLSVAL 484
           G+TS   +F WG+     L HGD        PRL       +ID  +  VACG   +  +
Sbjct: 175 GATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLN--TTHIID--VQSVACGEKHAAIV 230

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G V++ G    G+LG  V+  +   ++   +A + V+ +A GA H  A++ + ++Y 
Sbjct: 231 TKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYE 290

Query: 545 WGKGANGQLGHGDKDNRNS---PTLVDFLKDKQVKRVVCGLNFTAII 588
           WG+G +     GD+  R+      L   L    + ++ CG   TAII
Sbjct: 291 WGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 337


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 399/675 (59%), Gaps = 43/675 (6%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           SL D+F+WGE   N    G   +   S        LP+ + +T  +DV ++ACG +HA +
Sbjct: 168 SLKDIFVWGEVPGNVLDHGDVSKANVS--------LPRLLNTTHIIDVQSVACGEKHAAI 219

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           VTKQGE+FSWG ++GGRLGH     VS P++IE L+   V+ +A G  HTCAV+ SG+LY
Sbjct: 220 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 279

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG+GT+  GL G   + S W P K+ G LDGI +  I+CG WHTA+++SAG LF +GDG
Sbjct: 280 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDG 339

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS-SSSSPSGSTSCGK 437
           +FG LGHGD ++ + P++VE+L+G+R   ++CG WHTAA+V    +  S++PSG     K
Sbjct: 340 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSG-----K 394

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LFTWGD D+G+LGH DK+ +L P CV PL D +  QV+C    ++ LT +G V+T+GS  
Sbjct: 395 LFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKE 454

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           +G+LG P+++      ++G +   FV E++ G+ H+A LT   KV+TWGKG  GQLG GD
Sbjct: 455 HGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGD 514

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHN 617
             +R+ PTLV+ L+DKQV  + CG NFT  ICLH+ +SS D SVCS+C   FGF RK+HN
Sbjct: 515 YVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHN 574

Query: 618 CYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSP 677
           CYNCG +FC +CS+ K  +AALAP  +K YRVCD CF++++K +   K           P
Sbjct: 575 CYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHRKL---------DP 625

Query: 678 RNRTGNVNHKTAELADREAQGPRL-QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVY 736
           + +         E+     +  R+ ++  +I+    S +    R   QNL +    +HV 
Sbjct: 626 QQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQR--SQNLAVP---DHV- 679

Query: 737 PVNKNLQMGRIYSP-------KSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR 789
              + L+ G +  P       +S  + +  +K+  S S       ++A  P S    SA 
Sbjct: 680 ---RTLRWGLVECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSAN 736

Query: 790 SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAE 849
            S   +D    M + L +E+ +L+ QV  L  +      +++   ++++    IA+DEA 
Sbjct: 737 DSKAELD---LMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAA 793

Query: 850 KCKTANEVIKSLTVQ 864
           KCK A ++IK L  Q
Sbjct: 794 KCKAAKDIIKVLIDQ 808



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 13/167 (7%)

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKE------PRLFPECVAPLIDENICQVACGHDLSVAL 484
           G+TS   +F WG+     L HGD        PRL       +ID  +  VACG   +  +
Sbjct: 165 GATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLN--TTHIID--VQSVACGEKHAAIV 220

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G V++ G    G+LG  V+  +   ++   +A + V+ +A GA H  A++ + ++Y 
Sbjct: 221 TKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYE 280

Query: 545 WGKGANGQLGHGDKDNRNS---PTLVDFLKDKQVKRVVCGLNFTAII 588
           WG+G +     GD+  R+      L   L    + ++ CG   TAII
Sbjct: 281 WGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 327


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 399/675 (59%), Gaps = 43/675 (6%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           SL D+F+WGE   N    G   +   S        LP+ + +T  +DV ++ACG +HA +
Sbjct: 166 SLKDIFVWGEVPGNVLDHGDVSKANVS--------LPRLLNTTHIIDVQSVACGEKHAAI 217

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           VTKQGE+FSWG ++GGRLGH     VS P++IE L+   V+ +A G  HTCAV+ SG+LY
Sbjct: 218 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 277

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG+GT+  GL G   + S W P K+ G LDGI +  I+CG WHTA+++SAG LF +GDG
Sbjct: 278 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDG 337

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS-SSSSPSGSTSCGK 437
           +FG LGHGD ++ + P++VE+L+G+R   ++CG WHTAA+V    +  S++PSG     K
Sbjct: 338 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSG-----K 392

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LFTWGD D+G+LGH DK+ +L P CV PL D +  QV+C    ++ LT +G V+T+GS  
Sbjct: 393 LFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKE 452

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           +G+LG P+++      ++G +   FV E++ G+ H+A LT   KV+TWGKG  GQLG GD
Sbjct: 453 HGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGD 512

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHN 617
             +R+ PTLV+ L+DKQV  + CG NFT  ICLH+ +SS D SVCS+C   FGF RK+HN
Sbjct: 513 YVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHN 572

Query: 618 CYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSP 677
           CYNCG +FC +CS+ K  +AALAP  +K YRVCD CF++++K +   K           P
Sbjct: 573 CYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHRKL---------DP 623

Query: 678 RNRTGNVNHKTAELADREAQGPRL-QDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVY 736
           + +         E+     +  R+ ++  +I+    S +    R   QNL +    +HV 
Sbjct: 624 QQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQR--SQNLAVP---DHV- 677

Query: 737 PVNKNLQMGRIYSP-------KSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSAR 789
              + L+ G +  P       +S  + +  +K+  S S       ++A  P S    SA 
Sbjct: 678 ---RTLRWGLVECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSAN 734

Query: 790 SSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAE 849
            S   +D    M + L +E+ +L+ QV  L  +      +++   ++++    IA+DEA 
Sbjct: 735 DSKAELD---LMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAA 791

Query: 850 KCKTANEVIKSLTVQ 864
           KCK A ++IK L  Q
Sbjct: 792 KCKAAKDIIKVLIDQ 806



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 13/167 (7%)

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKE------PRLFPECVAPLIDENICQVACGHDLSVAL 484
           G+TS   +F WG+     L HGD        PRL       +ID  +  VACG   +  +
Sbjct: 163 GATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLN--TTHIID--VQSVACGEKHAAIV 218

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G V++ G    G+LG  V+  +   ++   +A + V+ +A GA H  A++ + ++Y 
Sbjct: 219 TKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYE 278

Query: 545 WGKGANGQLGHGDKDNRNS---PTLVDFLKDKQVKRVVCGLNFTAII 588
           WG+G +     GD+  R+      L   L    + ++ CG   TAII
Sbjct: 279 WGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 325


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 324/893 (36%), Positives = 467/893 (52%), Gaps = 112/893 (12%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
           LIWYS   E+ L L+ VS ++ GQ+T                           IC D+D+
Sbjct: 49  LIWYSKGREKHLSLSSVSAVVLGQKT---------------------------ICSDRDQ 81

Query: 62  AEVWLVGLKALITRGTHSKWKLGT-----INCSTSSDSPRARIRKTSPTV--TPFDFGDI 114
           AE W +GL+AL+         +G+     ++  T++ S   +++   P+   TP      
Sbjct: 82  AEYWYLGLRALLPTPCSPCSSIGSRSSRQMDSCTNTPSSYVQLKSRLPSAHGTPRHIQVY 141

Query: 115 QGTQVPLDNVSNNGLG-----------KAFADIISYTEAANTNSRADSVSFSPSPLTNAF 163
              + P       G             + F+DI +Y                 +P  +  
Sbjct: 142 SSHRNPKKATFFGGSADCSEALFYPRQRTFSDIDTYLGKLTRKM--------SNPEIHGL 193

Query: 164 PDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVG 223
            D         E  +I+ +  + +     A    DSL DVF WG+   +         + 
Sbjct: 194 QDIMVGNREKEE--KITQTPKLKTFEGPRAACRLDSLKDVFFWGDAFGS--------ILD 243

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
           Y     T   LP  V+ST  LDV +IACG  HA ++TKQGE++SWG ES G +G+     
Sbjct: 244 YD---DTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIK 300

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
           VS P+L+E ++ ++V+ VA G  H CAVT SG+L+ WG+G +   L  + + +  W P K
Sbjct: 301 VSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNL--WFPHK 358

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           +   LDGI +  I+CG WHTA++TS+G L+T+GDG+FG LGHGD   T+ P+EVE L+G 
Sbjct: 359 LFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGS 418

Query: 404 RTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
           R   V+CG WHTAA+V V +D  S+SP       KLFTWGD D+G+LGH DK+ +L P C
Sbjct: 419 RVKCVACGPWHTAAIVEVLSDFKSNSPRS-----KLFTWGDADRGKLGHADKKMKLIPTC 473

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
           V  L D +  QV+CG  L+V L+ +G V+T+GS+ +GQLG P ADG     V+G +   F
Sbjct: 474 VDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEF 533

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           V  ++ G+ HVA LT+  KV+TWGKG  GQLG GD  NR++PTLVD L+ +QV+ + CG 
Sbjct: 534 VRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGY 593

Query: 583 NFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPS 642
           N+TA +CLHK +S  D SVCS C   FGF RK+HNCY+CG +FC +CSS K  +AALAP 
Sbjct: 594 NYTAAVCLHKIISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAALAPD 653

Query: 643 INKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQ 702
             + YRVCD CF++L +             VV S + ++     K AE+    +  P+L 
Sbjct: 654 KIRRYRVCDGCFSQLLR-------------VVDSAKVKSELKISKGAEII--RSYTPKLS 698

Query: 703 DQLSILSSFDSNKQTE--SRLSKQNLKLELQDNHVYPVNKNLQMGRI-----YSPKSSIF 755
                    D+N   E  + + + N + E+    V    K+ + G++     + P    F
Sbjct: 699 RIFR-----DANLPVEKVALVQRPNQRNEVPATPVQA--KSQRWGQVECPAQFLPGEDSF 751

Query: 756 LAKSSKKKFSASAS-SSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDS---LNQEIIK 811
             +S  K    SAS S RM  L T   SG+S    +     D  K +N +   L +E+ +
Sbjct: 752 RYQSISKNHMCSASVSERMHDL-TVLKSGRSLQQPND----DQRKDLNTTETLLTEEVKQ 806

Query: 812 LRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           LR+QV  L  +      ++E   ++L     I  DEA KCK A ++IK LT Q
Sbjct: 807 LRSQVTLLVEQYHQKALQVELYKQKLDETWLIVRDEAAKCKAAKDIIKVLTDQ 859


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/668 (39%), Positives = 400/668 (59%), Gaps = 39/668 (5%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           DSL D+F+WG+ + +        +   S        LP+ + ST  LDV N++CG +HA 
Sbjct: 165 DSLKDIFVWGDVLGSVLDDRDTSKANVS--------LPRLLNSTQILDVQNVSCGEKHAA 216

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           +VTKQGE+FSWG+E GGRLGH     V HP++IE L+  +V+ +A G  HTCA+  SG+L
Sbjct: 217 IVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGEL 276

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           + WG+GT++ G+     + S W P K+ G L+G+ +  ++CG WHTA+++S+G LFT+GD
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSCG 436
           G+FG LGHGD  S + P+EVE+L+GLR   V+CG WHTAA+V +     S++PSG     
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSG----- 391

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           KLFTWGD D+G+LGH DKE +L P CV  L D +  QV+C   L+VALT +G V+T+GS 
Sbjct: 392 KLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSK 451

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +GQLG    D      V+G +   FV E++ G+ HVA LT   KV+TWGKG  GQLG G
Sbjct: 452 EHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLG 511

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRH 616
           +  +R+SPTLV+ L+DKQV  + CG NFT  +CLH+ +S  D SVCS C   F F RK+H
Sbjct: 512 NYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSFSFARKKH 571

Query: 617 NCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQS 676
           NCYNCG +FC +CS+ K  +AAL P  NK YRVCD CFT+L+K +     +S  T  ++ 
Sbjct: 572 NCYNCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEECGTVSSRLT--IEK 629

Query: 677 PRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVY 736
                  +   T +L+    +   + +++++   +  +++ +   +   L+++       
Sbjct: 630 EEAFPTEIRAYTPKLSRIFKEANSIMEKMALAQGY--HQRNQDLAAPDQLRIQ------- 680

Query: 737 PVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTID 796
                 + G++  P S    A++S        S+S+  ++  S  +  + SA S    +D
Sbjct: 681 ------RWGQVECP-SQFRCARNS----IPCCSTSKEQTVDESVPAKSAQSASSLKAELD 729

Query: 797 DSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANE 856
            ++++   L +E+ +L+A V  LT +  +   +++   ++++    I  DEA KCK A E
Sbjct: 730 STEKI---LLEEVKQLQAHVTTLTEQCRYRSLKVQLCKQKVEETWLIVRDEAAKCKAAKE 786

Query: 857 VIKSLTVQ 864
           +IK LT Q
Sbjct: 787 IIKVLTNQ 794


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/689 (40%), Positives = 395/689 (57%), Gaps = 72/689 (10%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DSL DVF WG+   +    G            T   LP  V+ST  LDV +IACG  HA
Sbjct: 228 LDSLKDVFFWGDAFGSILECG-----------DTSKPLPMLVDSTNMLDVQSIACGETHA 276

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
            ++TKQGE++SWG ES GR+G+     VS P++++ L+ ++V+ VA G  HTCAVT SG+
Sbjct: 277 AIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGE 336

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           L  WG+G Y   L  +      W P K+   LDGI +  I+CG WHTA++TS+G L+T+G
Sbjct: 337 LIEWGEGPYMGQLDSYARNQ--WFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYG 394

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSC 435
           DG+FG LGHGD   T+ P+EVE+L+G R   V+CG WHTAA+V V +D  S+SP      
Sbjct: 395 DGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRS---- 450

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            KLFTWGD D+G+LGH DK+ +L P CV  L D +  QV+CG  L+VAL+ +G V+T GS
Sbjct: 451 -KLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGS 509

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
           + +GQLG P ADG   + V+G +   FV  ++ G+ HVA +T+  KV+TWGKG  GQLG 
Sbjct: 510 SMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGL 569

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
           GD  NR++PTLVD L+ + V+ + CG N+TA +CLHK +S  D SVCS C   FGF RK+
Sbjct: 570 GDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVISRKDLSVCSGCKMAFGFTRKK 629

Query: 616 HNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQ 675
           HNCY+CG +FC +CSS K  KAALAP  ++ YRVCD CF++L K             VV 
Sbjct: 630 HNCYHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGCFSQLLK-------------VVD 676

Query: 676 SPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHV 735
           S + ++     K AE+    +  P+L                 SR+ + ++ L ++   V
Sbjct: 677 SGKVKSELNTSKGAEII--RSYTPKL-----------------SRIFR-DVNLPVEKEKV 716

Query: 736 YPVNKNLQMGRI-YSP---KSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSS 791
             V ++ Q   + Y+P   KS  +       +F ++  SS   S++ + +   S S R  
Sbjct: 717 ALVQRSNQRNEVLYTPVQAKSQRWGQVECPAQFLSAEDSSHYQSISKNHMYSASVSERMH 776

Query: 792 AVTIDDS----KQMNDS------------LNQEIIKLRAQVEELTSKSEHLEAELERTSK 835
             T+  S    +Q ND             L +E+ +LR+Q+  L  +      ++E   +
Sbjct: 777 DPTVLKSGRSLQQPNDDQRKDLNSIEETLLTEEVKQLRSQMTLLMEQYHQKALQVELYKQ 836

Query: 836 QLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           +L     I  +EA KCK A ++IK LT Q
Sbjct: 837 KLDETWLIVRNEAAKCKAAKDIIKVLTDQ 865



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 27/72 (37%)

Query: 2  LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDE 61
          LIWYS   E+ L L+ VS ++ GQ+T                           IC D+D+
Sbjct: 50 LIWYSKGREKHLSLSSVSAVVLGQKT---------------------------ICSDRDQ 82

Query: 62 AEVWLVGLKALI 73
          AE W +GL+AL+
Sbjct: 83 AENWYLGLRALL 94


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 288/670 (42%), Positives = 381/670 (56%), Gaps = 122/670 (18%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY--NDRSLDLICKD 58
            LIWYSG+EE+QL+L+ +++IIPGQRT  FQR  + E+E +SFSL+Y   +RSLDLICKD
Sbjct: 50  FLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKD 109

Query: 59  KDEAEVWLVGLKALITRGTHSKWKLGTI-NC---STSSDSPRARIRKTSPTVTPFDFGDI 114
           K +A+ W +GLKA+I+R  H + +L T  NC    T  +SP    R+        + G +
Sbjct: 110 KAQADSWFLGLKAVISRCQHPR-QLSTFRNCVGVQTCFNSPAGYFRRK------HNLGLL 162

Query: 115 QGTQVPLDNVSNNGLGKAFADIISY----TEAANTNSRADSVSFSPSPLTNAFPDNSNDR 170
           + T               F+ + S     T++ +    +D +S+S     ++    SN+ 
Sbjct: 163 EDT-------------PKFSQVRSLCGSPTQSLSERCFSDGLSYSADSFYSSESSVSNN- 208

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
                                      D L DV IWGEGI  G LGGG +R G     Q+
Sbjct: 209 ---------------------------DILRDVMIWGEGIEGGILGGGVYRFGNQNGMQS 241

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           DALLPK +EST  LDV  I+ G +HA LVTK GE+F WGE SGGRLGH    D+ +P+++
Sbjct: 242 DALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIV 301

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           E L+GV V+ V+CGEY TCA+T SG+LYTWGD      L+G   K S WIP ++SG L+G
Sbjct: 302 ESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNG 361

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             +S ++CG WH A+V+++G LFT+GDG+FG LGHG   S S P+EVE+L GL     +C
Sbjct: 362 TSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAAC 421

Query: 411 GVWHTAAVV-VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           G WHTAA+V V  D    +  G    GKLFTWGDGDKGRLGHGD+E +L P CVA L+D 
Sbjct: 422 GPWHTAAIVEVRADRLKFNTKG----GKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDH 477

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  QV+CG  L+V LT  G VYTM     G+LG    D   P  V+ E+    VE +ACG
Sbjct: 478 DFVQVSCGRMLTVGLTCLGTVYTM-----GRLG-DTEDRNSPAVVE-ELRYRQVESIACG 530

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +   AA+                                                    C
Sbjct: 531 SGFTAAI----------------------------------------------------C 538

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           LHK +SS D S CS C   FGF RK+HNCYNCGL+FC+ACS++K L A+LAP+  KP+RV
Sbjct: 539 LHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRV 598

Query: 650 CDDCFTKLKK 659
           CD C+T L++
Sbjct: 599 CDPCYTYLQR 608



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 42/74 (56%)

Query: 789 RSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEA 848
           R +++ + D    +  L +E+ +LR++   L    +    +++   ++L+   ++A +EA
Sbjct: 678 RENSIALKDFPDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQKLQETWSLAREEA 737

Query: 849 EKCKTANEVIKSLT 862
            KCK A EVIK+L+
Sbjct: 738 AKCKAAKEVIKALS 751


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/679 (40%), Positives = 390/679 (57%), Gaps = 88/679 (12%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
             DSL D+F+WG+ +    LG          S      LP+ V ST  LDV +IACG  HA
Sbjct: 451  LDSLKDIFLWGD-VLGSMLG----------SEDLPKALPRLVGSTKMLDVQSIACGENHA 499

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             ++TKQGE+FSWG+ES GRLGH     +S P++++ L+ V+V++VA G  HTCAVT SG+
Sbjct: 500  AIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGE 559

Query: 317  LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
            L+ WG+G  + GLL      + W+P K+ G +D I +S I+CG WH A++TS+G LFT+G
Sbjct: 560  LFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYG 619

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV-VATDSSSSSPSGSTSC 435
            DG+FG LGHGD    + P+EVE+L+GLR + V+CG WHTAA+V V +   +++PSG    
Sbjct: 620  DGTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWHTAAIVEVMSSFKANAPSG---- 675

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
             KLFTWG+ D+G+L H DK+ +L P CV  LI  +  QV+CG  L+V LT +G V+T+GS
Sbjct: 676  -KLFTWGNADRGKLDHADKKMKLVPTCVDSLIVYDFIQVSCGMALTVVLTVTGVVFTVGS 734

Query: 496  AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            + +GQLG P  DG     V+G +   FV E++ G+ HVA LT   KV+TWGKGA GQLG 
Sbjct: 735  SRHGQLGNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGL 794

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
            GD  NR+SPTLV+ L+ + V+ + CG +FTA ICLHK +S  D SVCS C   FGF RK+
Sbjct: 795  GDYVNRSSPTLVEALEGRHVESIACGSSFTAAICLHKAISIKDQSVCSGCQMAFGFTRKK 854

Query: 616  HNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLK------KTDTKLKRTSG 669
            HNCYNCG +FC +CSS K  KA+ AP  N+ YRVCD CF +L+      K  ++LK + G
Sbjct: 855  HNCYNCGSMFCNSCSSNKIAKASFAPE-NRRYRVCDVCFCQLQKAVDSSKVKSELKTSKG 913

Query: 670  --YTSVVQSPRNRTGNVNHKTAELADREA--QGPRLQDQLSILSSFDSNKQTESRLSKQN 725
              + + ++S   +   +  +   + ++ A  QGP              N++ E   +   
Sbjct: 914  EMFKTEMKSYTPKLSRIFKEANFIVEKMALLQGP--------------NQRNEDSATPVQ 959

Query: 726  LKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKS 785
            +K +             + G++  P   I                S   S    P+S   
Sbjct: 960  VKTQ-------------RWGQVECPAQFI----------------SAQDSFQNKPMS--- 987

Query: 786  SSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAE 845
               ++    I  S++M+DS     + LR+      S  E  E ++      L  V A+  
Sbjct: 988  ---KNQMCGISFSQRMHDS-----VVLRSGSSLQQSADELKEYDI------LVDVQAVVR 1033

Query: 846  DEAEKCKTANEVIKSLTVQ 864
            DEA KCK A +VIK LT Q
Sbjct: 1034 DEAAKCKPAKDVIKVLTDQ 1052


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/427 (59%), Positives = 311/427 (72%), Gaps = 14/427 (3%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +LIW SGKEE++LKL+ VSRIIPGQRT  FQRYPRPEKEYQSFSLIYNDRSLDLICKDKD
Sbjct: 51  VLIWLSGKEEKRLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 110

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN-CSTSSDSPRARIRKTSPTVTPFDFGD-IQGTQ 118
           EAEVWL GLKALI+RG H K +  + +  S+ ++SPR   +++SP  +PF  GD +Q   
Sbjct: 111 EAEVWLTGLKALISRGHHQKGRTESRSGVSSEANSPRTHTQRSSPLSSPFGSGDSMQKDG 170

Query: 119 V-------PLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDR- 170
           V       P ++    GL KA +D+I Y         ++S   S   L++   D  N R 
Sbjct: 171 VDPLRLHTPYESPPKIGLEKALSDVILYAVPPKAFFPSESGCNSVHSLSSGGSDGINGRL 230

Query: 171 -SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
                + FR+SLSS VSSSS GS H+D D+LGDVFIWGEG  +G LGGG  RVG S S +
Sbjct: 231 KGMGVDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGTLGGGVLRVGSSSSVK 290

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D+ +PK +ES + LDV NIACG RHA LVTKQGE+FSWGEESGGRLGHG ++DVSHP+L
Sbjct: 291 MDSFVPKPLESAVLLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKL 350

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+ L  +N+ELVACGEYH+CAVT SGDLYTWG G+YN GLLG G+ +S W+P+++ G  +
Sbjct: 351 IDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPSE 410

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GIH+S ISCG WHTAVVTSAG LFTFGDG+FG LGHGD  S  IPREVE+L+GLRT  + 
Sbjct: 411 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRTQLL- 469

Query: 410 CGVWHTA 416
              W T+
Sbjct: 470 --FWETS 474



 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 191/489 (39%), Positives = 258/489 (52%), Gaps = 64/489 (13%)

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
           +P+ +E+   L    ++CG  H A V              T  G++F+WG+   GRLGHG
Sbjct: 295 VPKPLESAVLLDVQNIACGGRHAALV--------------TKQGEVFSWGEESGGRLGHG 340

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY--GQLGVPV-ADGL 509
                  P+ +  L + NI  VACG   S A+T SG +YT G  +Y  G LG        
Sbjct: 341 VDSDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHW 400

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
           VP R+ G      V  ++CG +H A +TS  +++T+G G  G LGHGD  +   P  V+ 
Sbjct: 401 VPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVES 460

Query: 570 LKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKAC 629
           LK         GL    +     W +S  + +            KRHNCYNCGLVFC +C
Sbjct: 461 LK---------GLRTQLLF----WETSQKYCL------------KRHNCYNCGLVFCHSC 495

Query: 630 SSRKSLKAALAPSINKPYRVCDDCFTKLKK-TDTKLKRTSGYTSVVQSPRNRTGNVNHKT 688
           SS+KSLK ++AP+ NKPYRVCD+CF+KL+K T+T     S  +          G++N   
Sbjct: 496 SSKKSLKTSMAPNPNKPYRVCDNCFSKLRKATETDSSSHSSLSR--------RGSMNQGL 547

Query: 689 AELADR-EAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQDNHVYPV-NKNLQMGR 746
            ELA++ E    R   QL   SS  S KQ ES  S++N KLE   + V P+ N   Q   
Sbjct: 548 NELAEKDEKLDSRSHVQLGKYSSMQSFKQVESGTSRRNKKLEFNSSRVSPLPNGASQWSA 607

Query: 747 IYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVT-----------I 795
             + KS       SKK  SAS   SR++S ATSP S +SS  R +  T           +
Sbjct: 608 TNNSKSFNPAFPPSKKFISASVPGSRIASRATSPTSRQSSPPRPATPTPILAGLTSSKIV 667

Query: 796 DDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTAN 855
            D+K  ND+L+QE++KLRAQVE LT K++  + ELERT+KQLK   A+A +E+ KCK A 
Sbjct: 668 VDAKSTNDNLSQEVLKLRAQVENLTRKAQLQDVELERTAKQLKDAIAVAGEESAKCKAAK 727

Query: 856 EVIKSLTVQ 864
           EVIKSLT Q
Sbjct: 728 EVIKSLTAQ 736



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 18/171 (10%)

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP 394
           K+  ++P+ +   +  + +  I+CG  H A+VT  G +F++G+ S G LGHG     S P
Sbjct: 290 KMDSFVPKPLESAVL-LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHP 348

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG--DKGRLGHG 452
           + ++ L+ +    V+CG +H+ AV ++              G L+TWG G  + G LG G
Sbjct: 349 KLIDALKNMNIELVACGEYHSCAVTLS--------------GDLYTWGGGSYNFGLLGRG 394

Query: 453 DKEPRLFPE-CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           +      P+  + P    ++  ++CG   +  +T++G ++T G   +G LG
Sbjct: 395 NDMSHWVPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 445



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 18/118 (15%)

Query: 201 GDVFIWGEGIAN-GFLGGGEHRVGYSFSRQTDALLPK-AVESTMALDVHNIACGARHAVL 258
           GD++ WG G  N G LG G     +         +PK  +  +  + V +I+CG  H  +
Sbjct: 376 GDLYTWGGGSYNFGLLGRGNDMSHW---------VPKRLIGPSEGIHVSSISCGPWHTAV 426

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV-------ACGEYHTC 309
           VT  G++F++G+ + G LGHG    V  P+ +E L G+  +L+        C + H C
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRTQLLFWETSQKYCLKRHNC 484


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/648 (40%), Positives = 375/648 (57%), Gaps = 44/648 (6%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           T+  LP+ ++S+  LDV +IACG +HA +VTKQG++FSWGEE+GGRLGH     VS P++
Sbjct: 10  TNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKI 69

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+ L+   ++ +A G  +TCAV+ SG+LY WG+G ++ G   +  + S W P K+    D
Sbjct: 70  IDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSD 129

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           GI ++ I+CG WHTA+V+S G LFT+G G+FG LGHGD  S   P+EVE+LRGLR   V+
Sbjct: 130 GISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVA 189

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG WHTAA+V     +S +P  +   GKLFTWG+    +LGH DK+ +L P  V  LID 
Sbjct: 190 CGPWHTAAIV----ETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDC 245

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +  QV+C           G V+T+GS  +GQLG P +D      V+G +   FV++++ G
Sbjct: 246 DFTQVSC-----------GVVFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSG 294

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             HVA LT   KV+TWGKG  GQLG GD  +R  PTLV+ L+DKQV  +VC  NFTA+IC
Sbjct: 295 NSHVAVLTMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSIVCSSNFTAVIC 354

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
           +H  +SS D +VCSSC   F F RK+HNCYNCG +FC +CSS K  +A LAP  +K  RV
Sbjct: 355 VHGEISSKD-TVCSSCRLAFRFTRKKHNCYNCGSMFCNSCSSNKVQRATLAPDKSKRCRV 413

Query: 650 CDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILS 709
           CD CF +L KT    K +       + P   T     K + +  +EA    ++   SI S
Sbjct: 414 CDACFNELNKTAEHGKMSCESKIQKEPPLTETRTYTPKLSRML-KEANFI-MEKMGSIRS 471

Query: 710 SFDSNKQ--TESRLSKQNL-KLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSA 766
               N++  T +++ KQ   ++E  D             +    + +I    +SKK+   
Sbjct: 472 PNQRNQESATLNQMQKQRWGQVECPD-------------QFKCARDNISHCLTSKKQPVD 518

Query: 767 SASSSRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLN----QEIIKLRAQVEELTSK 822
                RM+     PVS K+++  +   T D  ++  D +     +E+ +L+AQV  L  +
Sbjct: 519 IGRIGRMN----DPVSQKTAAPLTR--TTDKRRKEQDLIEKIMLEEVKQLQAQVTTLAEE 572

Query: 823 SEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQGLNSKV 870
             H   +++   ++L+    IA DEA KC  A E+IK LT Q  +  V
Sbjct: 573 CRHRSLKVQLYKRKLEETWLIARDEATKCNAAKEIIKILTNQNFSDTV 620



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 65/279 (23%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSR-QTDALLP-KAVESTMALDVHNIACGARHAVL 258
           G+++ WGEGI         H +G+  ++ Q     P K + ++  + V  IACG  H  +
Sbjct: 95  GELYEWGEGI---------HSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAI 145

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS---- 314
           V+  G++F++G  + G LGHG    V  P+ +E L G+ V+ VACG +HT A+  +    
Sbjct: 146 VSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVACGPWHTAAIVETSGTP 205

Query: 315 ------GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW------- 361
                 G L+TWG+ +     LGH  K S  +P +V   +D    + +SCG+        
Sbjct: 206 KSNAPGGKLFTWGNASGEK--LGHTDKKSKLVPTRVESLID-CDFTQVSCGVVFTIGSKD 262

Query: 362 ----------------------------------HTAVVTSAGHLFTFGDGSFGALGHGD 387
                                             H AV+T  G +FT+G G+ G LG GD
Sbjct: 263 HGQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGD 322

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           ++  + P  VE L   +   + C    TA + V  + SS
Sbjct: 323 YLDRTFPTLVEALEDKQVDSIVCSSNFTAVICVHGEISS 361


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/622 (42%), Positives = 369/622 (59%), Gaps = 58/622 (9%)

Query: 263 GEIFSWGE---ESGGRLGHGREA-------DVSHPQLIEILSGVNVELVACGEYHTCAVT 312
           G+++ WGE   ++  R G    A       D+  P+ +E    ++V  VACG  H   VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG----NLDGIHL-----SYISCGLWHT 363
           R  +++TWG+    SG LGHG+  S + PR V      N++ + +       +SCG WHT
Sbjct: 278 RQAEVFTWGEEC--SGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHT 335

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A+ TS+G L+TFGDG+FG LGHG+  + S P+EVE+L+GLRT  VSCGVWHTAAVV    
Sbjct: 336 ALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIM 395

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
           + S+     TS GKLFTWGDGDK RLGHGD+  +L P CV  LID N  +  CGH L++ 
Sbjct: 396 AQSN-----TSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIG 450

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           LTTSGH++T GS+ YGQLG P  DG  P  V+ ++    V EV CGAYHVA LT + +VY
Sbjct: 451 LTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVY 510

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCS 603
           TWGKGANG+LGHGD  +R +PT V+ L+D+ VKR+ CG  FTA IC HK VS ++ S CS
Sbjct: 511 TWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCS 570

Query: 604 SCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTK 663
           SC  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ KL K    
Sbjct: 571 SCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKV--- 627

Query: 664 LKRTSGYTSVVQSPRNRTGNVNHKTAELADR-EAQGPRLQDQLSILSSFDSNKQTESRLS 722
                   S +   +N T  +   +   AD+ +++G R    ++  +S D  K  + + +
Sbjct: 628 ------LDSGIGHNKNNTPRIPGDSK--ADKMDSKGNR----VASANSSDMIKNLDVKAA 675

Query: 723 KQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVS 782
           KQ  K +      YP     Q   I   K   F+  + ++   ++ SS  +       + 
Sbjct: 676 KQTKKYD------YPP----QFPAILQLKDIPFIGAADQQPNDSTYSSPLLR------LP 719

Query: 783 GKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTA 842
             +SS+  S+ + D  +  N+ L QE+ KL+ +V  L  + E  +A+L+++  +      
Sbjct: 720 NLNSSSSLSSESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAHEAMT 779

Query: 843 IAEDEAEKCKTANEVIKSLTVQ 864
           +A +EA K K A +VIKSLT Q
Sbjct: 780 LASEEASKSKAAKDVIKSLTAQ 801


>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
          Length = 358

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 235/347 (67%), Gaps = 15/347 (4%)

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHGD  + S PREVE+L GLRT   +CGVWHTAA+V    + SS+   S S GKLFTWG
Sbjct: 2   LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSA---SISSGKLFTWG 58

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           DGDK RLGHGDK+ RL P CV+ LID N  ++ACGH L+V LTTSGHV+TMGS  YGQLG
Sbjct: 59  DGDKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLG 118

Query: 503 VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
            P +DG +P  V+ ++A   VEE+ACGAYHV  LTS ++VYTWGKGANG+LGHGD ++R 
Sbjct: 119 NPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRK 178

Query: 563 SPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCG 622
            PTLV+ LKD+ VK + CG N++A ICLHKWVS  + S CS+C   FGF RKRHNCYNCG
Sbjct: 179 MPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCG 238

Query: 623 LVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTG 682
           LV C +CSSRK+ +AALAP+  KPYRVCD C+TKL K                S  NR  
Sbjct: 239 LVHCHSCSSRKAFRAALAPNPGKPYRVCDSCYTKLIKI------------AESSNNNRRN 286

Query: 683 NVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLE 729
            +     E  DR  +      + ++ S+ D  KQ +S+ +KQ  K +
Sbjct: 287 GMPRFPGENKDRLEKSELRLLKPAVPSNMDLIKQLDSKAAKQGKKAD 333



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 111/221 (50%), Gaps = 30/221 (13%)

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR-----------SGDLYTWGDGT 324
           LGHG   ++S+P+ +E LSG+     ACG +HT A+             SG L+TWGDG 
Sbjct: 2   LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGD 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            N   LGHG K +   P  VS  +D  +   I+CG   T  +T++GH+FT G   +G LG
Sbjct: 62  KNR--LGHGDKDARLEPTCVSALID-YNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLG 118

Query: 385 HGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           +       +P  VE  L G     ++CG +H   +              TS  +++TWG 
Sbjct: 119 N-PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVL--------------TSKNEVYTWGK 163

Query: 444 GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
           G  GRLGHGD E R  P  V  L D ++  +ACG + S A+
Sbjct: 164 GANGRLGHGDIEDRKMPTLVEALKDRHVKYIACGSNYSAAI 204



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 20/221 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTK-----------QGEIFSWGEESGGRLGHGREAD 283
           P+ VES   L     ACG  H   + +            G++F+WG+    RLGHG +  
Sbjct: 13  PREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGDKNRLGHGDKDA 72

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH---GSKVSCWI 340
              P  +  L   N   +ACG   T  +T SG ++T G   Y  G LG+     K+ C +
Sbjct: 73  RLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVY--GQLGNPQSDGKLPCLV 130

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
             K++G      +  I+CG +H  V+TS   ++T+G G+ G LGHGD     +P  VE L
Sbjct: 131 EDKLAGEC----VEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMPTLVEAL 186

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           +      ++CG  ++AA+ +    S +  S  ++C + F +
Sbjct: 187 KDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGF 227



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 17/170 (10%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMALDVHNIACGARHAV 257
           S G +F WG+G  N        R+G+      DA L P  V + +  + H IACG    V
Sbjct: 50  SSGKLFTWGDGDKN--------RLGHG---DKDARLEPTCVSALIDYNFHRIACGHSLTV 98

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGD 316
            +T  G +F+ G    G+LG+  ++D   P L+E  L+G  VE +ACG YH   +T   +
Sbjct: 99  GLTTSGHVFTMGSTVYGQLGN-PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNE 157

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           +YTWG G   +G LGHG      +P  V   L   H+ YI+CG  ++A +
Sbjct: 158 VYTWGKGA--NGRLGHGDIEDRKMPTLVEA-LKDRHVKYIACGSNYSAAI 204



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 229 QTDALLPKAVESTMALD-VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
           Q+D  LP  VE  +A + V  IACGA H  ++T + E+++WG+ + GRLGHG   D   P
Sbjct: 121 QSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMP 180

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            L+E L   +V+ +ACG  ++ A+     L+ W  G   S          C   R+  G 
Sbjct: 181 TLVEALKDRHVKYIACGSNYSAAIC----LHKWVSGAEQS---------QCSTCRQAFGF 227

Query: 348 LDGIHLSYISCGLWH 362
               H  Y +CGL H
Sbjct: 228 TRKRHNCY-NCGLVH 241


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/358 (51%), Positives = 234/358 (65%), Gaps = 26/358 (7%)

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G+++ WGE     L    E++V           ++V  +ACG  H   VTR G+++TWG+
Sbjct: 237 GDVYIWGEVICDNLVKPLESNVV----------LDVHHIACGVRHAALVTRQGEIFTWGE 286

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSG-----------NLDGIHLSYISCGLWHTAVVTSAGH 371
              + G LGHG       PR V              L+G+ ++ ++CG WHTA+VT+   
Sbjct: 287 --ESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQ 344

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           LFTFGDG+FG LGHGD  + + PREVE+L GLRT  V+CGVWHTAAVV    + SS+   
Sbjct: 345 LFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA--- 401

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
           S S GKLFTWGDGDK RLGHGDKEPRL P CV  LI+ N  +VACGH L+V LTTSG V 
Sbjct: 402 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVC 461

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
           TMGS  YGQLG P +DG +P  V+ ++    VEE+ACGAYHVA LTS ++VYTWGKGANG
Sbjct: 462 TMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANG 521

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPF 609
           +LGHGD ++R +PTLV+ LKD+ VK + CG N+TA ICLHKWVS       S   +PF
Sbjct: 522 RLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGTVQIFSSRSVSPF 579



 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 227/568 (39%), Positives = 305/568 (53%), Gaps = 92/568 (16%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND--RSLDLICKDK 59
           LIW S   ER LKL  VSRIIPGQRTA FQRY RPEK+Y SFSLIYN+  RSLDLICKDK
Sbjct: 50  LIWISSSGERILKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDK 109

Query: 60  DEAEVWLVGLKALITRGTHSK-----WKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
            EAEVW+ GLKALI+ G   +     W  G +    S D        +S + T     DI
Sbjct: 110 VEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYFDDSKDLTSNSPSDSSVSATR----DI 165

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSN--DRSS 172
              +V +   SN               + N+    +SV   P   ++   D++N   + S
Sbjct: 166 SSPEVSVGFNSNT--------------SPNSYRPENSV---PPERSHVALDHTNMQTKGS 208

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
            ++ FR+S+SS  S+SSHGSA +D D+LGDV+IWGE I +  +                 
Sbjct: 209 GSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVICDNLV----------------- 251

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
              K +ES + LDVH+IACG RHA LVT+QGEIF+WGEESGGRLGHG   DV  P+L+E 
Sbjct: 252 ---KPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVES 308

Query: 293 LSGVNVELVA------------CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
           L+  +V+ VA            CG +HT  VT +  L+T+GDGT+  G+LGHG K +   
Sbjct: 309 LAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTF--GVLGHGDKDNVAY 366

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVV-----------TSAGHLFTFGDGSFGALGHGDHI 389
           PR+V  +L G+    ++CG+WHTA V            S+G LFT+GDG    LGHGD  
Sbjct: 367 PREVE-SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 425

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
               P  V  L      +V+CG  H+  V            G T+ G++ T G    G+L
Sbjct: 426 PRLKPTCVPALIEYNFQKVACG--HSLTV------------GLTTSGQVCTMGSTVYGQL 471

Query: 450 GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADG 508
           G+   + +L       L+ E + ++ACG      LT+   VYT G  A G+LG   + D 
Sbjct: 472 GNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDR 531

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAAL 536
             PT V+  + +  V+ +ACG+ + AA+
Sbjct: 532 KTPTLVE-TLKDRHVKYIACGSNYTAAI 558



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 12/104 (11%)

Query: 773 MSSLATSPVSGKSSSARSS-----------AVTIDDS-KQMNDSLNQEIIKLRAQVEELT 820
            SS + SP S K S  RS+           + +I DS K+ N+ LNQE++KLR QVE L 
Sbjct: 571 FSSRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLR 630

Query: 821 SKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
            + E  E EL++++K+++    +A +E+ K K A EVIKSLT Q
Sbjct: 631 ERCELQELELQKSAKKVQEAMVVATEESAKSKAAKEVIKSLTAQ 674


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/464 (34%), Positives = 230/464 (49%), Gaps = 35/464 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           D++ WG     G LG GE         +T+ L P+ VE+ +  D+  +ACG  H + V+ 
Sbjct: 374 DIYTWGAS-PKGVLGHGE---------ETEELFPRVVEALLGRDIRTVACGTEHTLAVSV 423

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            GE+FSWG   GG+LG     D   P  I     VN+  V+C E H+ +VT SG+LYT+G
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG 483

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
               + G      K +  +PRKV  +     +  +SCGL  T  + S G L++FG    G
Sbjct: 484 RSGPHLGYTTEDRKQA--VPRKVDFSTAN-KIKAVSCGLEFTIALNSEGELYSFGKNDCG 540

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LG G       P  ++ L G+R ++VSCG  H  AV V               G ++ W
Sbjct: 541 QLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVN--------------GDVWLW 586

Query: 442 GDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G  + G+LG    E    P E  +   +E I  + CG   +V L+ +G VY  G+   GQ
Sbjct: 587 GSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQ 646

Query: 501 LGVPVADGLVPTRVDGEIA----ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           LGV V +   P   +  I      + + +V CG  H AA+T +  +YTWG G+ G+LGHG
Sbjct: 647 LGVAV-NQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHG 705

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRH 616
           D  +R  PTLV+ L  KQV+ + CG   TA   +  WV   +   C +C   F   R+RH
Sbjct: 706 DHQDRYVPTLVESLAYKQVQSIACGAYHTAACVIRAWVHDQETKSCMACKQRFTTVRRRH 765

Query: 617 NCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKT 660
           +C  CG +FC  CS RK     L    ++P RVCD C+  L ++
Sbjct: 766 HCRKCGGIFCGTCSQRKC--PLLEIGYSEPVRVCDRCYFILTES 807



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 197/497 (39%), Gaps = 123/497 (24%)

Query: 42  SFSLIYND----RSLDLICKDKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRA 97
           SFS+IY      RSLD++CKD+ E ++W VGL+AL             IN   + D  R 
Sbjct: 296 SFSVIYKQGNTKRSLDIVCKDRVEYDIWTVGLQAL-------------INGFDNLDGLR- 341

Query: 98  RIRKTSPTVTPFDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPS 157
                   ++  D     G ++ L+      LG  F D +S  E A      D  ++  S
Sbjct: 342 -------LMSEADLSKADG-KLMLE------LG-LFGDRVSVKEDA-----CDIYTWGAS 381

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLG 216
           P                      L   + + + G+ H    S+ G++F WG G   G LG
Sbjct: 382 P-KGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWGCG-RGGKLG 439

Query: 217 GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL 276
                         D  +P  + +   +++  ++C   H+  VT+ GE++++G  SG  L
Sbjct: 440 ---------LKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG-RSGPHL 489

Query: 277 GH-----------------------------------------------------GREAD 283
           G+                                                     G   D
Sbjct: 490 GYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFND 549

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
           +  P LI+ L+GV +  V+CG  H  AVT +GD++ WG   +  G LG     +  IP +
Sbjct: 550 IEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEF--GQLGTDKLEAHDIPFE 607

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSI--PREVETL 400
                    +  I CG  HT V++  G ++ FG+G  G LG   +  S  I  P  +   
Sbjct: 608 APSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMP 667

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
              +  +V CG+ HTAAV              T  G L+TWG+G +GRLGHGD + R  P
Sbjct: 668 NNTKIAKVDCGIEHTAAV--------------TESGCLYTWGNGSRGRLGHGDHQDRYVP 713

Query: 461 ECVAPLIDENICQVACG 477
             V  L  + +  +ACG
Sbjct: 714 TLVESLAYKQVQSIACG 730



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 114/251 (45%), Gaps = 32/251 (12%)

Query: 347 NLDGIHLS------------YISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           NLDG+ L              +  GL+    +V   A  ++T+G    G LGHG+     
Sbjct: 336 NLDGLRLMSEADLSKADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEEL 395

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            PR VE L G     V+CG  HT AV V               G++F+WG G  G+LG  
Sbjct: 396 FPRVVEALLGRDIRTVACGTEHTLAVSVN--------------GEMFSWGCGRGGKLGLK 441

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD--GLV 510
           +   R  P  +    + NI  V+C    S ++T SG +YT G +    LG    D    V
Sbjct: 442 NILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSG-PHLGYTTEDRKQAV 500

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           P +VD   A   ++ V+CG     AL S  ++Y++GK   GQLG G  ++   P L+  L
Sbjct: 501 PRKVDFSTANK-IKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFNDIEEPYLIKHL 559

Query: 571 KDKQVKRVVCG 581
              ++ +V CG
Sbjct: 560 NGVRISKVSCG 570


>gi|414590766|tpg|DAA41337.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 521

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/410 (40%), Positives = 219/410 (53%), Gaps = 80/410 (19%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           GKLFTWGDGDK RLGHGDKEP+L P             +ACGH L+V LTTS  V +MG+
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKP------------TIACGHSLTVGLTTSRQVLSMGN 84

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YGQLG P ++                            LT+ S+V+TWGKGANG+LGH
Sbjct: 85  IVYGQLGNPRSN---------------------------VLTNKSEVFTWGKGANGRLGH 117

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
           GD ++R  PT+V+ L+D+ ++ + CG NFT+ IC HKWVS  + S  +SC  PFGF RKR
Sbjct: 118 GDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQYASCRQPFGFTRKR 177

Query: 616 HNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQ 675
           HNC+NCGLV C  C+S K L+AALAP+  KPYRVCD CF KL         ++ Y+S + 
Sbjct: 178 HNCHNCGLVHCNVCTSHKVLRAALAPNPAKPYRVCDSCFMKLN--------SATYSSTIN 229

Query: 676 S-----PRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLEL 730
                 PR+ +G  NH  A+LA           +  + S+ D  +  +S+ +KQ  K + 
Sbjct: 230 KKKEVVPRH-SGESNHD-AKLA-----------RAIVPSNLDMIRSLDSKAAKQGKKTDA 276

Query: 731 QDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARS 790
                 P   +L   R  +    I L KS  +    S  S   SS   SP S K S  RS
Sbjct: 277 LSFLRTPQMSSLLQLRDITLSGVIDLNKSVPRAVRTSVRSLN-SSRVVSPFSRKPSPPRS 335

Query: 791 S-----------AVTIDDS-KQMNDSLNQEIIKLRAQVE--ELTSKSEHL 826
           +           A T  DS  + N+ L+QE+ +LRAQ E  + + K EHL
Sbjct: 336 TTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQSEIVKKSKKREHL 385



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 7/118 (5%)

Query: 370 GHLFTFGDGSFGALGHGD---HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           G LFT+GDG    LGHGD    +  +I        GL T+R    V     +V     + 
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKPTIACGHSLTVGLTTSR---QVLSMGNIVYGQLGNP 93

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            S +  T+  ++FTWG G  GRLGHGD E R  P  V  L D  I  +ACG + + A+
Sbjct: 94  RS-NVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAI 150



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 42/177 (23%)

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++F+WG+    RLGHG +     P             +ACG   T  +T S  + + G+
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKP------------TIACGHSLTVGLTTSRQVLSMGN 84

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             Y  G LG+        PR                    + V+T+   +FT+G G+ G 
Sbjct: 85  IVY--GQLGN--------PR--------------------SNVLTNKSEVFTWGKGANGR 114

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           LGHGD     IP  VE+LR      ++CG   T+A+      S +  S   SC + F
Sbjct: 115 LGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQYASCRQPF 171



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 35/180 (19%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQT--------DALLPKAVESTMALDVHNIACG 252
           G +F WG+G         +HR+G+               +L      S   L + NI  G
Sbjct: 37  GKLFTWGDG--------DKHRLGHGDKEPKLKPTIACGHSLTVGLTTSRQVLSMGNIVYG 88

Query: 253 ----ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
                R  VL T + E+F+WG+ + GRLGHG   D   P ++E L    +  +ACG   T
Sbjct: 89  QLGNPRSNVL-TNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFT 147

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+ +    + W  G   S         SC  P   +      H    +CGL H  V TS
Sbjct: 148 SAICQ----HKWVSGAEQSQY------ASCRQPFGFTRKRHNCH----NCGLVHCNVCTS 193


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 230/468 (49%), Gaps = 42/468 (8%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           D+  D+++WG        GG   R+G+   +     LP  VES +  +V  IACG  H +
Sbjct: 159 DNSCDLYLWG--------GGDRGRLGHKDDKPR--FLPNVVESLLGQNVTMIACGGSHTI 208

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGD 316
            +  +G++FSWG    G LGHG   D   P +I+  L  VNV  VAC E H+  ++  G+
Sbjct: 209 ALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGN 268

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LYTWG      G +   S      PR V   L G  +  ++CG  HT V+   G +++FG
Sbjct: 269 LYTWGKAGPFLGYMDD-SVTKQTKPRLVDA-LYGTRIVQVACGRSHTLVIDEEGRVYSFG 326

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
              FG LG G   + + P  V  L  +   +VSCG  H+AA+    D            G
Sbjct: 327 INKFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAI----DED----------G 370

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            LF WG G +G+LG G+ +    P  V    D+ +  V+CG+  + A+T +G  Y  G  
Sbjct: 371 VLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDN 430

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVE--EVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           A  Q GVP +     +   G +  S +   ++ CGA     +TS  +++TWG   +GQLG
Sbjct: 431 ASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLG 490

Query: 555 HGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
           +G+ K   + P  V+ L +K+VK V CG +    +  H WV   +   C +C   F   R
Sbjct: 491 NGEAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWVPDEEVKSCMACKKSFTAIR 550

Query: 614 KRHNCYNCGLVFCKACSSRKSLKAALAPSINK----PYRVCDDCFTKL 657
           +RH+C  CG +FC +CS+++       P ++K    P RVCD C+  L
Sbjct: 551 RRHHCRQCGGIFCGSCSTKR------YPLLDKGHADPVRVCDKCYVSL 592


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/378 (38%), Positives = 202/378 (53%), Gaps = 30/378 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG G  +G LG G+          +D   P  +++     +  IACG+ H V++T +
Sbjct: 3   VYSWGRG-EDGQLGLGD---------TSDQHRPVPIDALAERRIVQIACGSGHTVVLTDE 52

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE+++WG    GRLGHG       P+L+E L G N+  V CG YHT AVT SGDLYTWG 
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G Y  G LGHG++     P  V   L G+ +  ++CG  HT V+     ++T+GD   G 
Sbjct: 113 GMY--GKLGHGNETGHSTPFLVE-TLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            GHGD      +P  VE LRG    ++S   +HTAA+              +  G++FT+
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAAL--------------SEFGEVFTF 215

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G+G  GRLGH  +  +     V  L  + + QVACG   + A+T +G VYT G   +GQL
Sbjct: 216 GEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 275

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G     +  VPTRV+  + E  V ++ CG  H  ALT T +VYTWG G +G+LGH D   
Sbjct: 276 GHGDKVNKTVPTRVE-SLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTK 334

Query: 561 RNSPTLVDFLKDKQVKRV 578
              P LVD L+ K+V  V
Sbjct: 335 VTLPKLVDVLEGKRVISV 352



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/326 (38%), Positives = 183/326 (56%), Gaps = 20/326 (6%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    G+LG G  +D   P  I+ L+   +  +ACG  HT  +T  G++YTWG G 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRG- 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            + G LGHG     ++PR V   L G ++  ++CG +HTA VT +G L+T+G G +G LG
Sbjct: 62  -DDGRLGHGDNGWKFVPRLVE-ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG+    S P  VETL+G++  +V+CG  HT  ++   D              ++TWGD 
Sbjct: 120 HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKD--------------VYTWGDK 165

Query: 445 DKGRLGHGDKEPRLFPEC-VAPLIDENICQV-ACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + G  GHGD E   +  C V  L  +NI Q+ ACG   + AL+  G V+T G   +G+LG
Sbjct: 166 ENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFH-TAALSEFGEVFTFGEGKFGRLG 224

Query: 503 VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                     R    +A   V++VACG +H AA+T T +VYTWG G +GQLGHGDK N+ 
Sbjct: 225 HNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKT 284

Query: 563 SPTLVDFLKDKQVKRVVCGLNFTAII 588
            PT V+ L +K V ++ CG + T  +
Sbjct: 285 VPTRVESLVEKLVVQITCGWSHTVAL 310



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 159/324 (49%), Gaps = 52/324 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG G  +G LG G++  G+ F       +P+ VE     ++  + CG+ H   VT
Sbjct: 53  GEVYTWGRG-DDGRLGHGDN--GWKF-------VPRLVEELRGKNIRQVTCGSYHTAAVT 102

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++++WG    G+LGHG E   S P L+E L G+ V  VACG  HT  +  + D+YTW
Sbjct: 103 VSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTW 162

Query: 321 GDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           GD    +G+ GHG ++   ++P  V   L G ++  IS   +HTA ++  G +FTFG+G 
Sbjct: 163 GD--KENGVSGHGDTEGHQYLPCPVE-ELRGKNIVQISACGFHTAALSEFGEVFTFGEGK 219

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV--------------------- 418
           FG LGH    +  + R VE L G R  +V+CG +HTAAV                     
Sbjct: 220 FGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGD 279

Query: 419 -----------------VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
                            VV      S     T  G+++TWG+GD G+LGH D      P+
Sbjct: 280 KVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPK 339

Query: 462 CVAPLIDENICQVACGHDLSVALT 485
            V  L  + +  VA  ++ +VAL 
Sbjct: 340 LVDVLEGKRVISVASYNEHTVALV 363



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 88/155 (56%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +++WG G+ G+LG GD   +  P  +  L +  I Q+ACG   +V LT  G VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G+LG          R+  E+    + +V CG+YH AA+T +  +YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           +   ++P LV+ LK  QV++V CG   T ++  +K
Sbjct: 123 ETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENK 157


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 199/378 (52%), Gaps = 30/378 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG G  +G LG G+          +D   P  +++     +  IACG+ H V++T++
Sbjct: 3   VYSWGRG-EDGQLGLGD---------TSDQHRPVPIDALAERRIVQIACGSGHTVVLTEE 52

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE+++WG    GRLGHG       P+L+E L G N+  V CG YHT AVT SGDLYTWG 
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G Y  G LGHG++     P  V   L  + +  ++CG  HT V+     ++T+GD   G 
Sbjct: 113 GMY--GKLGHGNETGHSTPYLVE-TLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            GHGD      +P  VE LRG    ++S   +HTAA+              +  G++FT+
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAAL--------------SEFGEVFTF 215

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G+G  GRLGH  +  +     V  L  + + QVACG   + A+T +G VYT G   +GQL
Sbjct: 216 GEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQL 275

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G     +  VPTRV+  + E  V ++ CG  H   LT T +VYTWG G +G+LGH D   
Sbjct: 276 GHGDKVNKTVPTRVE-SLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAK 334

Query: 561 RNSPTLVDFLKDKQVKRV 578
              P  VD L  K+V  V
Sbjct: 335 VTLPKPVDVLDGKRVISV 352



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 182/326 (55%), Gaps = 20/326 (6%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    G+LG G  +D   P  I+ L+   +  +ACG  HT  +T  G++YTWG G 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRG- 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            + G LGHG     ++PR V   L G ++  ++CG +HTA VT +G L+T+G G +G LG
Sbjct: 62  -DDGRLGHGDNGWKFVPRLVE-ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG+    S P  VETL+ ++  +V+CG  HT  ++   D              ++TWGD 
Sbjct: 120 HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKD--------------VYTWGDK 165

Query: 445 DKGRLGHGDKEPRLFPEC-VAPLIDENICQV-ACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + G  GHGD E   +  C V  L  ++I Q+ ACG   + AL+  G V+T G   +G+LG
Sbjct: 166 ENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFH-TAALSEFGEVFTFGEGKFGRLG 224

Query: 503 VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                     R    +A   V++VACG +H AA+T T +VYTWG G +GQLGHGDK N+ 
Sbjct: 225 HNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKT 284

Query: 563 SPTLVDFLKDKQVKRVVCGLNFTAII 588
            PT V+ L +K V ++ CG + T  +
Sbjct: 285 VPTRVESLLEKLVLQITCGWSHTVTL 310



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 157/324 (48%), Gaps = 52/324 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG G  +G LG G++  G+ F       +P+ VE     ++  + CG+ H   VT
Sbjct: 53  GEVYTWGRG-DDGRLGHGDN--GWKF-------VPRLVEELRGKNIRQVTCGSYHTAAVT 102

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++++WG    G+LGHG E   S P L+E L  + V  VACG  HT  +  + D+YTW
Sbjct: 103 VSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTW 162

Query: 321 GDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           GD    +G+ GHG ++   ++P  V   L G  +  IS   +HTA ++  G +FTFG+G 
Sbjct: 163 GD--KENGVSGHGDTEGHQYLPCPVE-ELRGKSIVQISACGFHTAALSEFGEVFTFGEGK 219

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV--------------------- 418
           FG LGH    +  + R V+ L G R  +V+CG +HTAAV                     
Sbjct: 220 FGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGD 279

Query: 419 -----------------VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
                            V+      S     T  G+++TWG+GD G+LGH D      P+
Sbjct: 280 KVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPK 339

Query: 462 CVAPLIDENICQVACGHDLSVALT 485
            V  L  + +  VA  ++ +VAL 
Sbjct: 340 PVDVLDGKRVISVASYNEHTVALV 363



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 88/155 (56%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +++WG G+ G+LG GD   +  P  +  L +  I Q+ACG   +V LT  G VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G+LG          R+  E+    + +V CG+YH AA+T +  +YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           +   ++P LV+ LK  QV++V CG   T ++  +K
Sbjct: 123 ETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENK 157



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           S+V  S+ G         G+VF +GEG   G LG    R     +R  DAL  K V+   
Sbjct: 192 SIVQISACGFHTAALSEFGEVFTFGEG-KFGRLGHNSER-NQPVARFVDALAGKRVK--- 246

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
                 +ACG  H   VT+ GE+++WG    G+LGHG + + + P  +E L    V  + 
Sbjct: 247 -----QVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQIT 301

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           CG  HT  +T +G++YTWG+G  + G LGH       +P+ V   LDG
Sbjct: 302 CGWSHTVTLTDTGEVYTWGNG--DHGKLGHNDTAKVTLPKPVD-VLDG 346


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 212/427 (49%), Gaps = 67/427 (15%)

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           GR+GHG E D   P+++E L G +V  +ACG  HT A   +G LYTWG G    G LGH 
Sbjct: 156 GRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAG---QGRLGHD 212

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
            +   +IP +VS  L G  +   +CG  HTA +T AG ++T+G G  G LGHGD  + S 
Sbjct: 213 HERDRFIPLEVSA-LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACST 271

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           PREV +L           +     V+V    ++    GS   G ++ WG  +KG+LG GD
Sbjct: 272 PREVASL----------ALQVIVVVIVVVVVAAVVAGGS---GTVYAWGGNEKGQLGFGD 318

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH--------VYTMGSAAYGQLGVPV 505
           + PR+ P  +A L   +I ++AC +  S       H        ++T G  A GQLG   
Sbjct: 319 RTPRMSPALLADL--SSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGT 376

Query: 506 ADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN-S 563
            +  LVP +V   + +  +  VA G  H AALTS  +V+TWG G++GQLGHG    R   
Sbjct: 377 EEEELVPRQVMA-LEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCK 435

Query: 564 PTLVDFLKD-----------------------------------KQVKRVVCGLNFTAII 588
           P L++ LKD                                   K+VK V CG    A +
Sbjct: 436 PLLIESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAAL 495

Query: 589 CLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYR 648
            LH W+   + ++C +C  PF   R+RH+C NCG +FC +CSS++   A L      P R
Sbjct: 496 VLHAWIPDEESTLCMACKAPFTMIRRRHHCRNCGGLFCGSCSSKRI--ALLDAGFASPVR 553

Query: 649 VCDDCFT 655
           VCD C +
Sbjct: 554 VCDRCHS 560



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 198/491 (40%), Gaps = 102/491 (20%)

Query: 18  VSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWLVGLKALITRGT 77
           +  I  GQ T  F++  +PE E  SFS+IY D++LDL+ K+  E ++W+ GLK L    T
Sbjct: 61  IDEIRIGQNTPVFKKNRKPEYENVSFSIIYGDKTLDLVSKNVRERDIWVQGLKVL----T 116

Query: 78  HSKWKLGTINCSTSSDSPRARI-----------RKTSPTVTPFDFGDIQGTQVPLDNVSN 126
                L  ++ S ++D  +  +           R+ S        GD +  +VP   V  
Sbjct: 117 LEPHLLSEVD-SVATDEEKVSVKFKGKRTIVEKREVSNDNGRVGHGDEEDHKVP--RVVE 173

Query: 127 NGLGKAFADII---SYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSS 183
             LGK    I    ++T A N      +       L +   D+  DR    E   +    
Sbjct: 174 ALLGKDVRGIACGAAHTAAWNGAGVLYTWGAGQGRLGH---DHERDRFIPLEVSALGGKK 230

Query: 184 VVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLG-------------------------- 216
           VV ++  G AH       G V+ WG+G   G LG                          
Sbjct: 231 VVQAAC-GYAHTAAITDAGRVYTWGQG-KGGVLGHGDESACSTPREVASLALQVIVVVIV 288

Query: 217 ------------------GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
                             GG  +    F  +T  + P  +    ++    IAC    + L
Sbjct: 289 VVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRMSPALLADLSSIS--RIACTYLQSNL 346

Query: 259 VTKQG--------EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
             K+          +++WG+ + G+LGHG E +   P+ +  L  VN+  VA G+ HT A
Sbjct: 347 PVKRRHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVMALEQVNIIAVAAGKAHTAA 406

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           +T  G+++TWGDG+   G LGHG+ +                L Y  C       +  +G
Sbjct: 407 LTSQGEVWTWGDGS--DGQLGHGAAI----------------LRY--CKPLLIESLKDSG 446

Query: 371 HLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           HL+ +G+   GALG G      S+PR VE + G +   V+CG  H AA+V+         
Sbjct: 447 HLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALVLHAWIPDEES 506

Query: 430 SGSTSCGKLFT 440
           +   +C   FT
Sbjct: 507 TLCMACKAPFT 517



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           D GR+GHGD+E    P  V  L+ +++  +ACG   + A   +G +YT G A  G+LG  
Sbjct: 154 DNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWG-AGQGRLGHD 212

Query: 505 -VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D  +P  V   +    V + ACG  H AA+T   +VYTWG+G  G LGHGD+   ++
Sbjct: 213 HERDRFIPLEVSA-LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACST 271

Query: 564 PTLVDFL 570
           P  V  L
Sbjct: 272 PREVASL 278


>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/154 (66%), Positives = 129/154 (83%), Gaps = 2/154 (1%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           FSWGEES GRLGHG +++V HP+LI+ L   N+ELVACGEYH+CAV+ SGDLYTWG G +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G+LGHG++VS W+P++V+  ++GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGH
Sbjct: 61  --GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           GD  S  IPREV++L+GLRT R +CGVWHTAAVV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 4/134 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           PK +++    ++  +ACG  H+  V+  G++++WG+   G LGHG E     P+ +  L 
Sbjct: 22  PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 81

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G++V  +ACG YHT  VT +G L+T+GDGT+  G+LGHG + S +IPR+V  +L G+  
Sbjct: 82  EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF--GVLGHGDRKSVFIPREVD-SLKGLRT 138

Query: 354 SYISCGLWHTAVVT 367
              +CG+WHTA V 
Sbjct: 139 VRAACGVWHTAAVV 152



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F+WG+  +GRLGHG       P+ +  L   NI  VACG   S A++ SG +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           G LG        VP RV+  +    V  +ACG YH A +TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + +   P  VD LK  +  R  CG+  TA +
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 18/161 (11%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+   + G LGHG   +   P+ +   L   ++  ++CG +H+  V+ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 378 GSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G FG LGHG+ +S  +P+ V  L  G+  + ++CG +HTA V              TS G
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV--------------TSAG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +LFT+GDG  G LGHGD++    P  V  L      + ACG
Sbjct: 104 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM-ALDVHNIACGARHAVLV 259
           GD++ WG+G   G LG G          +    +PK V   M  + V +IACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILGHG---------NEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           T  G++F++G+ + G LGHG    V  P+ ++ L G+     ACG +HT AV  
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 153


>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 129/154 (83%), Gaps = 2/154 (1%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           FSWGEES GRLGHG +++V HP+LI+ L   N+ELVACGEYH+CAV+ SGDLYTWG G +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G+LGHG++VS W+P++V+  ++GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGH
Sbjct: 61  --GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           GD  S  IPRE+++L+GLRT R +CGVWHTAAVV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 84/134 (62%), Gaps = 4/134 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           PK +++    ++  +ACG  H+  V+  G++++WG+   G LGHG E     P+ +  L 
Sbjct: 22  PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 81

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G++V  +ACG YHT  VT +G L+T+GDGT+  G+LGHG + S +IPR++  +L G+  
Sbjct: 82  EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF--GVLGHGDRKSVFIPREID-SLKGLRT 138

Query: 354 SYISCGLWHTAVVT 367
              +CG+WHTA V 
Sbjct: 139 VRAACGVWHTAAVV 152



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F+WG+  +GRLGHG       P+ +  L   NI  VACG   S A++ SG +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           G LG        VP RV+  +    V  +ACG YH A +TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + +   P  +D LK  +  R  CG+  TA +
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 18/161 (11%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+   + G LGHG   +   P+ +   L   ++  ++CG +H+  V+ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 378 GSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G FG LGHG+ +S  +P+ V  L  G+  + ++CG +HTA V              TS G
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV--------------TSAG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +LFT+GDG  G LGHGD++    P  +  L      + ACG
Sbjct: 104 QLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACG 144



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM-ALDVHNIACGARHAVLV 259
           GD++ WG+G   G LG G          +    +PK V   M  + V +IACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILGHG---------NEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           T  G++F++G+ + G LGHG    V  P+ I+ L G+     ACG +HT AV  
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVE 153


>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 102/154 (66%), Positives = 129/154 (83%), Gaps = 2/154 (1%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           FSWGEES GRLGHG +++V HP+LI+ L   N+ELVACGEYH+CAV+ SGDLYTWG G +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G+LGHG++VS W+P++V+  ++G+H+S I+CG +HTAVVTSAG LFTFGDG+FG LGH
Sbjct: 61  --GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           GD  S  IPREV++L+GLRT R +CGVWHTAAVV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 4/134 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           PK +++    ++  +ACG  H+  V+  G++++WG+   G LGHG E     P+ +  L 
Sbjct: 22  PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 81

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G++V  +ACG YHT  VT +G L+T+GDGT+  G+LGHG + S +IPR+V  +L G+  
Sbjct: 82  EGMHVSSIACGPYHTAVVTSAGQLFTFGDGTF--GVLGHGDRKSVFIPREVD-SLKGLRT 138

Query: 354 SYISCGLWHTAVVT 367
              +CG+WHTA V 
Sbjct: 139 VRAACGVWHTAAVV 152



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F+WG+  +GRLGHG       P+ +  L   NI  VACG   S A++ SG +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           G LG        VP RV+  +    V  +ACG YH A +TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + +   P  VD LK  +  R  CG+  TA +
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 18/161 (11%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+   + G LGHG   +   P+ +   L   ++  ++CG +H+  V+ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 378 GSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G FG LGHG+ +S  +P+ V  L  G+  + ++CG +HTA V              TS G
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVV--------------TSAG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +LFT+GDG  G LGHGD++    P  V  L      + ACG
Sbjct: 104 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM-ALDVHNIACGARHAVLV 259
           GD++ WG+G   G LG G          +    +PK V   M  + V +IACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILGHG---------NEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVV 99

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           T  G++F++G+ + G LGHG    V  P+ ++ L G+     ACG +HT AV  
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 153


>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 783

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 196/383 (51%), Gaps = 35/383 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +E T  LDV  IA GARH +  T+ G ++SWGE +GG+LG     D   P  +E L 
Sbjct: 65  PRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMPTRVE-LD 123

Query: 295 GVNVELVACGEYHTCAVTRS---------GDLYTWGDGTYNSGLLGHG-SKVSCWIPRKV 344
           G  V L ACG  H+ AV R          GD   WGD     GLLG   ++   + P K+
Sbjct: 124 GRAVTL-ACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI 182

Query: 345 SGNLD------GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE 398
           S  +D      G+ +  +SCG  HTA VT  G  FT+G+GSF ALGHGD      PRE+E
Sbjct: 183 SFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELE 242

Query: 399 TLR--GLRTTRVSCGVWHTAAVVVATDSS-------SSSPSGSTSCGKLFTWGDGDKGRL 449
           T R       RV+CGVWHTAA+V A  ++       +      T  G+LFTWGDG+ G+L
Sbjct: 243 TFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQL 302

Query: 450 GHGDKEPRLFPECVAPLIDE---NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           G    E    P   +  + +    +C V+CG   +VALT+ G V+  G        + V 
Sbjct: 303 GIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGCVGKVDNSLRVK 362

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD-NRNSPT 565
              V TR+        V  V  G  HV A T   +V++WG G NG+LGHG  D ++ +P 
Sbjct: 363 ---VFTRLP-NFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDKAAPE 418

Query: 566 LVDFLKDKQVKRVVCGLNFTAII 588
            ++ L+ + V R+ CG   +A +
Sbjct: 419 EIESLRGRTVLRIACGPTSSACV 441



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 114/294 (38%), Gaps = 78/294 (26%)

Query: 201 GDVFIWGE-GIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
           GD  +WG+   A G LG  E R    F  +    +  ++ +   + V  ++CG  H   V
Sbjct: 152 GDACVWGDPNAAPGLLGRPEARAVTFFPGKISFAM-DSISAGGGVKVVQVSCGPCHTACV 210

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN--VELVACGEYHTCAV------ 311
           T+ G  F+WGE S   LGHG       P+ +E     N  V  VACG +HT A+      
Sbjct: 211 TETGACFTWGEGSFYALGHGDRECQRAPRELETFRRDNRVVLRVACGVWHTAAIVAAVGN 270

Query: 312 ---------------TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL--DGIHLS 354
                          T  G+L+TWGDG   SG LG        +P   S  L   G  + 
Sbjct: 271 TIRKVPVVADDDEFDTVDGELFTWGDG--ESGQLGIRGVEEASVPTATSDQLGKPGSEVC 328

Query: 355 YISCGLWHTAVVTSAG-------------------------------------------- 370
            +SCG  HT  +TS G                                            
Sbjct: 329 NVSCGQHHTVALTSKGDVWLAGCVGKVDNSLRVKVFTRLPNFETGSVSAVESGDNHVVAA 388

Query: 371 ----HLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                +F++G G  G LGHG +    + P E+E+LRG    R++CG   +A V+
Sbjct: 389 TRDGRVFSWGVGKNGRLGHGKNDRDKAAPEEIESLRGRTVLRIACGPTSSACVL 442


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 204/386 (52%), Gaps = 35/386 (9%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +I++WGE + G LGHG +   +HP ++E L G ++  VACG  HT A+++ G++++WG G
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSG 267

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA---GHLFTFGDGSF 380
               G LG G     + P ++ G L+ ++L+ ++C  +H+A V +    G LF+FG+  +
Sbjct: 268 Y--GGRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDY 324

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG   D + TS  + V +L   + +RV+CG +H+AA+                 G L+
Sbjct: 325 GQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEH--------------GSLW 370

Query: 440 TWGDGDKGRLGHGDKEPRLFP---ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            WG  + G+LG+G+      P   E    L  + + +VACG   S  +T  G ++  G  
Sbjct: 371 LWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430

Query: 497 AYGQLGVPVADGL-------VPTRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKG 548
            YGQLG  + D         V  RV   +   F    VACG  H A +T   +++TWG+G
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRV--RVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRG 488

Query: 549 ANGQLGHGDKDNRNSPTLVDF-LKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
             G+LGHGD  NR+ PT ++  ++ K V+ V CG   TA      WV   +   C +C  
Sbjct: 489 KGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKT 548

Query: 608 PFGFRRKRHNCYNCGLVFCKACSSRK 633
            F   R+RH+C  CG VFC ACSS++
Sbjct: 549 RFTTVRRRHHCRKCGGVFCGACSSKR 574



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 77/490 (15%)

Query: 7   GKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYN-----DRSLDLICKDKDE 61
           GKE+  + ++ + ++I GQ+T  F+    P+ E  SFS++Y       RSLD++CK + E
Sbjct: 91  GKEKSVVPISMMIQLIIGQKTKVFESCQVPQYECLSFSIMYKVNNGPIRSLDIVCKSRRE 150

Query: 62  AEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDIQGTQVPL 121
            ++W  G++AL++ G      +  ++   S D       +T       +FG +    V +
Sbjct: 151 FDIWTCGIQALLS-GFSDIQAMNKVDFEDSQD-------QTDSGTVEVEFGLLGQATVHV 202

Query: 122 DNVSNNGLGKAFADIISYTEAAN-TNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRIS 180
              +         DI ++ E  N      +    +   +  A       + +   T  ++
Sbjct: 203 KEDA--------CDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLA 254

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           LS                  G+VF WG G   G LG G  R         D   P  +  
Sbjct: 255 LSKD----------------GEVFSWGSGYG-GRLGQGHLR---------DRFTPIRICG 288

Query: 241 TMALDVHNIACGARHAVLV---TKQGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGV 296
             +L++  +AC   H+  V   +KQG +FS+GE   G+LG   +  + S+ Q +  LS  
Sbjct: 289 LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEH 348

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH--LS 354
            +  VACG +H+ A+   G L+ W  G   SG LG+G+  S  +P  +    D  H  + 
Sbjct: 349 KISRVACGSFHSAALAEHGSLWLW--GCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVM 406

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALG------HGDHISTSIPREVETLRGLRTTRV 408
            ++CG  H+A +T  G +F  GD ++G LG        DH++ ++   V      R   V
Sbjct: 407 EVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHV 466

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLI 467
           +CG  HTA V              T  G++FTWG G  GRLGHGD   R  P E    + 
Sbjct: 467 ACGDSHTAVV--------------TDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGME 512

Query: 468 DENICQVACG 477
            +++  V+CG
Sbjct: 513 GKHVRGVSCG 522



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 23/232 (9%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           V   A  ++T+G+G+ G LGHG+    + P  VE L G    +V+CG  HT A+      
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL------ 255

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSV 482
                   +  G++F+WG G  GRLG G    R  P  +  L   N+ QVAC   H  +V
Sbjct: 256 --------SKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAV 307

Query: 483 -ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTST 539
            A +  G +++ G   YGQLG+P  D L+ + +     ++E  +  VACG++H AAL   
Sbjct: 308 CACSKQGALFSFGENDYGQLGIP-EDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEH 366

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDF---LKDKQVKRVVCGLNFTAII 588
             ++ WG   +GQLG+G+  + + P+L++    L+   V  V CG   +A I
Sbjct: 367 GSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFI 418


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 201/378 (53%), Gaps = 30/378 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG G  +G LG G+          +D   P  VE+        I+CG+ H V++T  
Sbjct: 3   VYTWGRG-EDGQLGLGD---------TSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD 52

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++++WG    GRLGHG       P+L+E L    V  V CG YHT AVT SG+LYTWG 
Sbjct: 53  GKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGG 112

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G Y  G LGHG++     P  V  ++ G+++  ++CG  HT V+     ++T+GD   G 
Sbjct: 113 GMY--GKLGHGNENGHSTPSLVE-SIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGV 169

Query: 383 LGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            GHGD       P  V  L  +   ++S   +HTAA+              +  G++FT+
Sbjct: 170 SGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAAL--------------SENGQVFTF 215

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G+G  GRLGH  +  +   +C+  LI + I QVACG   + A+T SGHV+T G   +GQL
Sbjct: 216 GEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQL 275

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G     + ++PTRV+  I ++ + ++ CG  H  ALT   +V+TWG G +G+LGH D + 
Sbjct: 276 GHGDKVNQIIPTRVESLIDKNII-QLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNK 334

Query: 561 RNSPTLVDFLKDKQVKRV 578
              P L++    K+V  V
Sbjct: 335 VTEPKLIETFNSKRVISV 352



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 186/335 (55%), Gaps = 38/335 (11%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +++WG    G+LG G  +D  HP L+E L       ++CG  HT  +T  G +YTWG G 
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG- 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            + G LGHG     ++PR V  +L    +  ++CG +HTA VT +G L+T+G G +G LG
Sbjct: 62  -DDGRLGHGDNGWKFVPRLVE-DLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG+    S P  VE+++GL   +V+CG  HT  ++   D              ++TWGD 
Sbjct: 120 HGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQD--------------VYTWGDK 165

Query: 445 DKGRLGHGDKEPRLF-PECVAPLIDENICQV-ACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + G  GHGD     + P CV+ L++ NI Q+ ACG   + AL+ +G V+T G   +G+LG
Sbjct: 166 ENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFH-TAALSENGQVFTFGEGKFGRLG 224

Query: 503 ------VPVA---DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
                  PVA   D L+  R+         ++VACG +H AA+T +  V+TWG G +GQL
Sbjct: 225 HNSERNQPVAKCIDALIGKRI---------KQVACGGFHTAAVTESGHVFTWGGGEHGQL 275

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GHGDK N+  PT V+ L DK + ++ CG + T  +
Sbjct: 276 GHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVAL 310



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 158/287 (55%), Gaps = 30/287 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G+  G LG G    G+S         P  VES   L V  +ACG+RH V++ 
Sbjct: 105 GELYTWGGGMY-GKLGHGNEN-GHS--------TPSLVESIKGLYVRQVACGSRHTVVLL 154

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNV-ELVACGEYHTCAVTRSGDLY 318
           +  ++++WG++  G  GHG  +   + P  +  L  +N+ ++ ACG +HT A++ +G ++
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACG-FHTAALSENGQVF 213

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G+G +  G LGH S+ +  + + +   L G  +  ++CG +HTA VT +GH+FT+G G
Sbjct: 214 TFGEGKF--GRLGHNSERNQPVAKCIDA-LIGKRIKQVACGGFHTAAVTESGHVFTWGGG 270

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LGHGD ++  IP  VE+L      +++CG  HT A+              T  G++
Sbjct: 271 EHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVAL--------------TDKGEV 316

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
           FTWG+GD G+LGH D      P+ +     + +  VA  ++ +VAL 
Sbjct: 317 FTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALV 363


>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 128/154 (83%), Gaps = 2/154 (1%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           FSWGEES GRLGHG +++V HP+LI+ L   N+ELVACGEY +CAV+ SGDLYTWG G +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G+LGHG++VS W+P++V+  ++GIH+S I+CG +HTAVVTSAG LFTFGDG+FG LGH
Sbjct: 61  --GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           GD  S  IPRE+++L+GLRT R +CGVWHTAAVV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           PK +++    ++  +ACG   +  V+  G++++WG+   G LGHG E     P+ +  L 
Sbjct: 22  PKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 81

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G++V  +ACG YHT  VT +G L+T+GDGT+  G+LGHG + S +IPR++  +L G+  
Sbjct: 82  EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF--GVLGHGDRKSVFIPREID-SLKGLRT 138

Query: 354 SYISCGLWHTAVVT 367
              +CG+WHTA V 
Sbjct: 139 VRAACGVWHTAAVV 152



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F+WG+  +GRLGHG       P+ +  L   NI  VACG   S A++ SG +YT G   +
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           G LG        VP RV+  +    V  +ACG YH A +TS  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + +   P  +D LK  +  R  CG+  TA +
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+   + G LGHG   +   P+ +   L   ++  ++CG + +  V+ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYXSCAVSLSGDLYTWGK 57

Query: 378 GSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G FG LGHG+ +S  +P+ V  L  G+  + ++CG +HTA V              TS G
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV--------------TSAG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +LFT+GDG  G LGHGD++    P  +  L      + ACG
Sbjct: 104 QLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACG 144



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM-ALDVHNIACGARHAVLV 259
           GD++ WG+G   G LG G          +    +PK V   M  + V +IACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILGHG---------NEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           T  G++F++G+ + G LGHG    V  P+ I+ L G+     ACG +HT AV  
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVE 153


>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 1375

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/450 (34%), Positives = 211/450 (46%), Gaps = 73/450 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GD ++WG   A     G     G    RQ  A  P  VE +  LDV  +A G RHA LVT
Sbjct: 249 GDCYVWGSSDA-----GIPPAQGSICDRQQSAT-PAIVEDSTHLDVCQVAVGLRHAALVT 302

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + GE+++WG  +GG+LG G   D   PQ ++ L G  +  +  G      V+  G LYTW
Sbjct: 303 RSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG----AVVSEEGFLYTW 358

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           GDG   +G LG+ + +  +IPR+V G L    ++ +SCG +H+A ++S G LFT+GDG  
Sbjct: 359 GDGA--AGNLGYSNALRQFIPRRVEGTLLDHTITQVSCGPYHSAALSSTGALFTWGDGLC 416

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC----- 435
           G LGHG   S   PR+V+ L+  R   V+CGVWHTAA+       SS PS  +       
Sbjct: 417 GKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAIAAGPIGGSSLPSSLSELSFQEA 476

Query: 436 ------------------GKLFTWG--------------------DGDKGRLGHGDKEPR 457
                             G LFTWG                    D  +G LGHGD    
Sbjct: 477 EALRHKLSAAYSMLDEEGGALFTWGGHFTWVDHRKNSAGHPVDKRDHHRGCLGHGDTAGC 536

Query: 458 LFPECV-APLIDENICQVACGHDLSVALTTSGHVYTMG-SAAYGQLGVPVADGLVPTRVD 515
           L P  V   L    + QV CG +L+VALT  G ++ MG + A G    P        +V 
Sbjct: 537 LAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQMGETGAPGHKLAPWEGAREAVQV- 595

Query: 516 GEIAESFVEEVACGAYHVAALTST--------------SKVYTWGKGANGQLGHGDKDNR 561
             I + +VE +A G  H AAL                 S ++TWG+G  GQLG G   + 
Sbjct: 596 -PIPDHYVERIAVGMQHAAALAGPLDGQTGRAEEGAECSVIFTWGRGREGQLGVGMHADS 654

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
             P  VD L+ + V +V CG   T  +C H
Sbjct: 655 AIPAPVDELRGRHVLQVACGGCHTLAVCRH 684



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 6/81 (7%)

Query: 1   MLIWYSGK-EERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND-----RSLDL 54
           +L W S   + R + L  V ++I GQ T  F+R+P P   + SFSL+Y D     R+LDL
Sbjct: 102 VLTWRSANGKPRSIPLASVKQVIKGQLTEIFKRHPLPHMAHASFSLMYIDLDLSSRTLDL 161

Query: 55  ICKDKDEAEVWLVGLKALITR 75
            C+++ E ++W  G++A+  R
Sbjct: 162 TCRNQQEFDLWYWGIQAIKDR 182



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE--------EVACGAY 531
           L V     G  Y  GS+     G+P A G +  R       + VE        +VA G  
Sbjct: 241 LPVPEQRPGDCYVWGSS---DAGIPPAQGSICDRQQ-SATPAIVEDSTHLDVCQVAVGLR 296

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           H A +T + +VYTWG GA G+LG G   +  +P  VD L  ++++ +V G   +    L+
Sbjct: 297 HAALVTRSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAGAVVSEEGFLY 356

Query: 592 KW 593
            W
Sbjct: 357 TW 358


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 247/502 (49%), Gaps = 44/502 (8%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           D S  R++A ET +     +   S+     ED     DV+ WGEG   G LG GE     
Sbjct: 126 DLSQLRATAPETDQKLQVVIDKGSTRVLIREDAS---DVYTWGEG-TRGMLGHGEEDPEA 181

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           S         P+ VE+ +  D+  +  G+ H + +   GE++SWG   GGRLG GRE D 
Sbjct: 182 S---------PRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGRLGQGRERDR 232

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
             P  +  L G ++  +AC E H+ AV  +G+ Y WG G   S  +     VS   P ++
Sbjct: 233 FTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGDKHVS---PTQI 289

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
              LDG  + + +CG   T  V  +G ++  G+   G LG G + + S P  V  L   R
Sbjct: 290 HA-LDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPE-R 347

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECV 463
             R++CG  H  A+              +  G+L+ WG    G+LG G+  E RL P  V
Sbjct: 348 IVRIACGNSHAVAL--------------SETGRLYAWGAHSSGQLGVGEPLEDRLSPVRV 393

Query: 464 -APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVA--DGLVPTRVDGEIA 519
            + ++ +++   ACG + ++ L+ SG +Y  GS A GQLG+ P+A  +   P  +     
Sbjct: 394 ESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAALPNPEG 453

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
             +   ++CG    AA++   K+YTWG GA+  LG  D   + +PTL++ + DK+ + V 
Sbjct: 454 RKYTA-ISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRTKYAPTLIESMADKRCRTVA 512

Query: 580 CGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKS--LKA 637
           CG    A   +H WV   + + C +C   F   R+RH+C  CG +FC  CS++K   L+A
Sbjct: 513 CGFFHMAATIIHGWVPDDEATQCMACKLKFTTIRRRHHCRKCGGIFCGNCSAKKFPLLEA 572

Query: 638 ALAPSINKPYRVCDDCFTKLKK 659
             + S+    RVCD C+  L +
Sbjct: 573 GFSESV----RVCDKCYVILSR 590


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 196/368 (53%), Gaps = 30/368 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           VF WG G  +G LG G+          +D   P  V++   + V  IACG+ H V++T  
Sbjct: 2   VFTWGRG-EDGQLGLGD---------TSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD 51

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE+F+WG    GRLGHG       P++ + L+G  V  V CG YHT AVT +GDLYTWG 
Sbjct: 52  GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG 111

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G Y  G LGHG +     P++V   L G  ++ I+CG  HTA+VT++G L+T+GD   G 
Sbjct: 112 GMY--GKLGHGDEAGHATPKRVE-ALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            GHG+      +PR +E++   R  ++S   +HTA V              T  G+LFTW
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIV--------------TDAGELFTW 214

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G+G  GRLGH  +     P  V  ++ +   QV+CG   +  ++  G +YT G   +GQL
Sbjct: 215 GEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQL 274

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G     + + PT V+  +   FV ++ CG  H  ALT    VYTWG G +G+LGHG+   
Sbjct: 275 GHNDRVNKMTPTFVE-ALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRK 333

Query: 561 RNSPTLVD 568
              P  V+
Sbjct: 334 VAVPQAVE 341



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 182/329 (55%), Gaps = 22/329 (6%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +F+WG    G+LG G  +D   P  ++ L GV V+ +ACG  HT  +T  G+++TWG G 
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG- 60

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            + G LGHG     ++PR    +L G  +  ++CG +HTA VT  G L+T+G G +G LG
Sbjct: 61  -DDGRLGHGDNGWKYVPRMTQ-SLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HGD    + P+ VE L G    +++CG  HTA V              T+ G L+TWGD 
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIV--------------TASGALYTWGDK 164

Query: 445 DKGRLGHGDKEPRLF-PECVAPLIDENICQV-ACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + G  GHG+ E   + P  +  +  + + Q+ ACG   ++ +T +G ++T G   +G+LG
Sbjct: 165 ENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAI-VTDAGELFTWGEGKFGRLG 223

Query: 503 -VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            +   +   PT VD  + +    +V+CG +H A ++   ++YT+G G +GQLGH D+ N+
Sbjct: 224 HMSERNCHSPTIVDYMVGKK-PRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNK 282

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +PT V+ L    V ++ CG + +  + +
Sbjct: 283 MTPTFVEALDGMFVSQITCGWSHSVALTV 311



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 146/265 (55%), Gaps = 30/265 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GD++ WG G+  G LG G+         +     PK VE+ +   V  IACG+RH  +VT
Sbjct: 104 GDLYTWGGGM-YGKLGHGD---------EAGHATPKRVEALVGATVAQIACGSRHTAIVT 153

Query: 261 KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNV-ELVACGEYHTCAVTRSGDLY 318
             G +++WG++  G  GHG  E     P+L+E ++   V ++ ACG +HT  VT +G+L+
Sbjct: 154 ASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACG-FHTAIVTDAGELF 212

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           TWG+G +  G LGH S+ +C  P  V   + G     +SCG +HTAVV+  G L+TFG G
Sbjct: 213 TWGEGKF--GRLGHMSERNCHSPTIVD-YMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGG 269

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LGH D ++   P  VE L G+  ++++CG  H+ A+ V               G +
Sbjct: 270 EHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVK--------------GLV 315

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECV 463
           +TWG+GD G+LGHG+      P+ V
Sbjct: 316 YTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 12/198 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+   NG  G GE         +    LP+ +ES  A  V  I+    H  +VT
Sbjct: 156 GALYTWGD-KENGVAGHGE--------TEGHQYLPRLLESMAAKRVAQISACGFHTAIVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             GE+F+WGE   GRLGH  E +   P +++ + G     V+CG +HT  V+  G LYT+
Sbjct: 207 DAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G +  G LGH  +V+   P  V   LDG+ +S I+CG  H+  +T  G ++T+G+G  
Sbjct: 267 GGGEH--GQLGHNDRVNKMTPTFVE-ALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDH 323

Query: 381 GALGHGDHISTSIPREVE 398
           G LGHG+    ++P+ VE
Sbjct: 324 GKLGHGNGRKVAVPQAVE 341



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 4/160 (2%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +FTWG G+ G+LG GD   +  P  V  L    + Q+ACG   +V LTT G V+T G   
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G+LG          R+   +A   V +V CG+YH AA+T    +YTWG G  G+LGHGD
Sbjct: 62  DGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGD 121

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
           +    +P  V+ L    V ++ CG   TAI+     L+ W
Sbjct: 122 EAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTW 161


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/386 (36%), Positives = 200/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 4001 DVYLWGAG-----------RHGQLAEAGRNVMIPAAAPSFSP--AQQVVCGQNCTFVIQA 4047

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 4108 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4164

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV             ST    +
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-------------STDGSMV 4211

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4212 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4271

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +A  F+E++A GA H  AL+ST  VY WG  + GQLG 
Sbjct: 4272 --IGLPEGRARNHNRPQQVP-LLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4328

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTLV  L+ K V+++  G
Sbjct: 4329 GHTNHVREPTLVTVLQGKNVRQISAG 4354



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLASSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4150 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST 4206

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4207 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL--------- 4257

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  +A G + ++AL+++
Sbjct: 4258 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSST 4312

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4313 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4363



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 163/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     +I     S    + V CG+  T  +  +G +   G
Sbjct: 4001 DVYLWG---AGR--HGQLAEAGRNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACG 4055

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4056 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKL
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKL 4158

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + +VA++T G  V+  G   
Sbjct: 4159 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGD 4218

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4219 YGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4277

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ +  G   T
Sbjct: 4278 RARNHNRPQQVPLLAGVFIEDIAVGAEHT 4306



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 165/333 (49%), Gaps = 31/333 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +I  N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDII--NVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 550 NGQLGHGDKDNRN-SPTLVDFLKDKQVKRVVCG 581
              LG G  +     P L++ L   ++  +  G
Sbjct: 643 C--LGCGSSEATALRPKLIEELAATRIVDISIG 673



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4104 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4153

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4154 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4213

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4214 FGDGDY--GKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4270

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    ++ G  HT A+              +S G ++
Sbjct: 4271 LIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLAL--------------SSTGDVY 4316

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4376

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4377 LQLGLP 4382



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  IP              + CG   T V+ + G +   
Sbjct: 4001 DVYLWGAGRH--GQLAEAGR-NVMIPAAAPSFSPA---QQVVCGQNCTFVIQANGTVLAC 4054

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 4101

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T  G ++T 
Sbjct: 4102 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4161

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYH-VAALTSTSKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H VA  T  S V+ +G G  
Sbjct: 4162 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4219

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4220 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4257



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +  +NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDI--INVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V  L    I Q++ G   S+A T
Sbjct: 710 KKVGGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN--VGEVSCGSSHT 573



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+   
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEALQG 613

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVA 302
           + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  ++
Sbjct: 614 MFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVDIS 671

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+ H  A++   ++Y WG+ +   G  G G+        K  G LDGI +  IS G  H
Sbjct: 672 IGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSH 729

Query: 363 TAVVTS 368
           +   T+
Sbjct: 730 SLAWTA 735


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/386 (35%), Positives = 200/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPVAAPSFS--QAQQVVCGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV             ST    +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-------------STDGSMV 4207

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4208 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   ++  F+E++A GA H  AL+ST  VY WG  + GQLG 
Sbjct: 4268 --IGLPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4324

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTL+  L+ K ++++  G
Sbjct: 4325 GHTNHVREPTLITVLQGKNIRQISAG 4350



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 164/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     ++ +   S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGR--HGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKL
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKL 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + +VA++T G  V+  G   
Sbjct: 4155 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGD 4214

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4215 YGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ +  G   T
Sbjct: 4274 RARNHNRPQQVPVLSGVFIEDIAVGAEHT 4302



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4146 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST 4202

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL--------- 4253

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  +A G + ++AL+++
Sbjct: 4254 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSST 4308

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4309 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4359



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4150 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWA 4209

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4210 FGDGDY--GKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4266

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    ++ G  HT A+              +S G ++
Sbjct: 4267 LIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL--------------SSTGDVY 4312

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  +  L  +NI Q++ G   S A T         G +  
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4372

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D + P
Sbjct: 4373 LQLGLP--DAIPP 4383



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 135/278 (48%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 4097

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T  G ++T 
Sbjct: 4098 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4157

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYH-VAALTSTSKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H VA  T  S V+ +G G  
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4215

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4216 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4253



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L   +I Q++ G   S+A T
Sbjct: 710 KKVSGLDGVSIQQISAGTSHSLAWT 734



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVSIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2760

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2761 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2821 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 2877

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2878 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2925

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2985

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 2986 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3041

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3042 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3094

Query: 614  KR 615
             R
Sbjct: 3095 AR 3096



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 190/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3706 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPIQLIGGEQTLFAVT 3755

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3756 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3815

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  I+ G  H+A +T+AG L+T+G G
Sbjct: 3816 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 3872

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3873 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 3920

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3921 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3980

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3981 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4039

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4040 TNAIQRPRLVAALQGKKINRVACG 4063



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 164/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 2763 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 2815

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G+IFSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2816 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 2875

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2876 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2978

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 2979 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3038

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3039 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3079



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3841

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDLYTWG G Y  G LGHG       P+ V   L G  
Sbjct: 3842 LRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 3898

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3899 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3958

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3959 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4004

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4005 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4064

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4065 AHTLAW-STSKPANAGK 4080



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  + +  +H +      + GD++ WG+G   G LG G+        
Sbjct: 3834 DRPRVIESLRGIEVVDIAAGGAHSAC---ITAAGDLYTWGKG-RYGRLGHGDSE------ 3883

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3884 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3940

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3941 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3998

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3999 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4057

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4058 NRVACGSAHTLA 4069



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 15/175 (8%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVACGHDLSVALT 485
            S +T   K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA G     A+T
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVAGGSKSLFAVT 2760

Query: 486  TSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKV 542
              G VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   K+
Sbjct: 2761 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820

Query: 543  YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            ++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 2875



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  I L      L+    VT+ G 
Sbjct: 3705 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLF---AVTADGK 3759

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3760 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3807

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  +A G   S  +T +G +Y
Sbjct: 3808 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLY 3867

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 3868 TWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 3926

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3927 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3966



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3705 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAV---------- 3754

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3755 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3810

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T+   +YTWG
Sbjct: 3811 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWG 3870

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3871 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 3914



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 50/203 (24%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + +  +AC E     ++R+G +Y     
Sbjct: 339 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQA-- 391

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            YNS  L               G +    L +              G ++++GDG +G L
Sbjct: 392 -YNSDTL--------------VGVVAVFSLIF--------------GQVWSWGDGDYGKL 422

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           G G       P+ +E L+ L   +V CG   + A+              T  G++++WG 
Sbjct: 423 GRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL--------------TKDGQVYSWGK 468

Query: 444 GDKGRLGHGDKEPRLFPECVAPL 466
           GD  RLGHG +E   +P+ +  L
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGL 491



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           AV     G+++SWG+   G+LG G       P+LIE L  ++V  V CG   + A+T+ G
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 461

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-----------------NLDGIHLSYISC 358
            +Y+WG G  ++  LGHG++     P+ + G                  LD  H+  I+C
Sbjct: 462 QVYSWGKG--DNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIAC 519

Query: 359 G 359
           G
Sbjct: 520 G 520



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 10/94 (10%)

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+ WG+G   G LG G    G    +      PK +E    LDV  + CG++ +V +
Sbjct: 408 FGQVWSWGDG-DYGKLGRG----GSDGCKT-----PKLIEKLQDLDVVKVRCGSQFSVAL 457

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           TK G+++SWG+    RLGHG E  V +P+L+E L
Sbjct: 458 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 50/84 (59%)

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G V++ G   YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGK
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 548 GANGQLGHGDKDNRNSPTLVDFLK 571
           G N +LGHG +++   P L++ L+
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G++++WGDGD G+LG G  +    P+ +  L D ++ +V CG   SVALT  G VY+ G 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 496 AAYGQLG 502
               +LG
Sbjct: 469 GDNQRLG 475



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 33/180 (18%)

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP-----LID 468
            TA V++A     ++P     C    +     +  +G G    + +   + P     L +
Sbjct: 306 QTAVVIMAHLDRLATPCMPPQCSSPTSHKGSLQEVIGWGLIGWKYYANVIGPIQCEGLAN 365

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
             I Q+AC     + L+ +G VY     AY       +D LV                  
Sbjct: 366 LGITQIACAEKRFLILSRNGRVYMQ---AYN------SDTLV------------------ 398

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G   V +L    +V++WG G  G+LG G  D   +P L++ L+D  V +V CG  F+  +
Sbjct: 399 GVVAVFSLI-FGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 457


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3995 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4041

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4101

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4102 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV             S+    +
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-------------SSDGSMV 4205

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4206 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4265

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4266 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4323

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4324 HTNHVREPTLVTVLQGKNVRQISAG 4348



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      ++  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4084 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4143

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V+S
Sbjct: 4144 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSS 4200

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4201 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4251

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4252 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4306

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4307 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4357



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 162/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3995 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4049

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4050 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4106

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4107 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4152

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A+++ G  V+  G   
Sbjct: 4153 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGD 4212

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4213 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4271

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4272 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4300



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4098 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4147

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4148 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWA 4207

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4208 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4264

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4265 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4310

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4311 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4370

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4371 LQLGLPDA 4378



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3995 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4048

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4094

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4095 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4154

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A++S  S V+ +G G 
Sbjct: 4155 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGD 4212

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4213 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4251



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R +R    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3996 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4042

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4267 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4325 HTNHVREPTLVTVLQGKNVRQISAG 4349



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4252

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4253 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4307

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4358



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3996 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4050

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4051 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4153

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4214 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4272

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4273 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4099 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4209 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4311

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4371

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4372 LQLGLPDA 4379



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3996 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4049

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4095

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4096 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTVLQGKNVRQISAG 4351



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4374 LQLGLPDA 4381



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +V+ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P+
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
            V   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 607 VVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3987 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4033

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4093

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4094 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4197

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4198 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4257

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4258 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4315

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4316 HTNHVREPTLVTVLQGKNVRQISAG 4340



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4076 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4135

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4136 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4192

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4193 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4243

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4244 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4298

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4299 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4349



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3987 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4041

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4042 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4098

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4099 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4144

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4145 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4204

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4205 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4263

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4264 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4292



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4090 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4139

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4140 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4199

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4200 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4256

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4257 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4302

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4303 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4362

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4363 LQLGLPDA 4370



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3987 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4040

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4086

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4087 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4146

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4147 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4204

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4205 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4243



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3993 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4039

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4100 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4203

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4204 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4263

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4264 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4321

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4322 HTNHVREPTLVTVLQGKNVRQISAG 4346



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4142 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4198

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4199 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4249

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4250 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4304

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4305 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3993 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4047

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4048 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4150

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4151 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4210

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4211 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4269

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4270 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4298



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4096 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4145

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4146 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4205

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4206 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4262

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4263 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4308

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4309 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4368

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4369 LQLGLP 4374



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3993 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4046

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4092

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4093 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4152

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4153 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4210

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4211 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 28/280 (10%)

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V++
Sbjct: 365 TPIVSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDS 424
           + G +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A       
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF------ 473

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVA 483
                   T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A
Sbjct: 474 --------TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           +T  G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + 
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRT 582

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           V+++G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++T
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVIST 420

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----G 477
           D S  +      CGK      G  GRLG GD   +   + +      +I +V+      G
Sbjct: 421 DGSVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           H L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+
Sbjct: 469 HTL--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           T   ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 4007 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4053

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4114 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4217

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4218 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4277

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4278 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4336 HTNHVREPTLVTVLQGKNVRQISAG 4360



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4156 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4212

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4213 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4263

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4264 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4318

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4319 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4369



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 4007 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4061

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4062 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4164

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4165 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4224

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4225 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4283

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4284 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4110 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4159

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4160 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4220 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4276

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4277 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4322

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4323 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4382

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4383 LQLGLPDA 4390



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 4007 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4060

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4106

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4107 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4166

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4167 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4224

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4225 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +V+ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P+
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
            V   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 607 VVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3012

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3073 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3129

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3238 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3346

Query: 614  KR 615
             R
Sbjct: 3347 AR 3348



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 190/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3957 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  I+ G  H+A +T+AG LFT+G G
Sbjct: 4067 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 4171

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L D  + +V CG   SVALT SG VYT G   Y
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4232 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4291 TNAIQRPRLVAALQGKKINRVACG 4314



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G+IFSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3291 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3331



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A++ +G++++WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISALSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   VS
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           +I +V CG   S+ALT  G VYT G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDL+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L  L   +V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC 4209

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4210 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4315

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4316 AHTLAW-STSKPANAGK 4331



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 166/346 (47%), Gaps = 35/346 (10%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGI 4096

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  G++F+WG+   GRLGHG   D   P+L+E L G  V  +AC 
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L  + +  + CG   
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTDLGVVKVECGSQF 4213

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4214 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4269

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4270 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319

Query: 483  ALTTS-----GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
            A +TS     G + T     Y  L  +P+        +   I+E F
Sbjct: 4320 AWSTSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLLLLHHISELF 4365



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG      +G    A+VS P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YNS  LG    V     R   K++ + DG H  Y++        +++ G +F++G G  
Sbjct: 477 AYNSDTLGP-QLVQSLASRNIVKIAAHSDGHH--YLA--------LSANGEVFSWGCGDG 525

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G
Sbjct: 526 GRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAI--------------TAEG 571

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ LK K+V  V  G    L  T    +H W S+
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  + +  +H +      + GD+F WG+G   G LG G+        
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSAC---ITAAGDLFTWGKG-RYGRLGHGDSE------ 4134

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4135 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+ + V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4192 VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4249

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4250 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4308

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4309 NRVACGSAHTLA 4320



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 145/303 (47%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+     +   +   L+          
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCG-DGGRLGHGD-----TVPLEEPKLISALSGKQAGK 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++T+G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 726 ----------TEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLDTKHIVGIACGPAQ 773

Query: 481 SVA 483
           S A
Sbjct: 774 SFA 776



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   K+++WG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3076

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTVLQGKNVRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4374 LQLGLPDA 4381



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 32/296 (10%)

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V++
Sbjct: 365 TPIVSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDS 424
           + G +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A       
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF------ 473

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVA 483
                   T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A
Sbjct: 474 --------TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           +T  G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + 
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRT 582

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           V+++G G NG+LGHGD +    P +V+ L+   +++V  G    L  T+   ++ W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P+
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
            V   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 607 VVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3235 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L +  IAC  +  +++++ G ++               +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYM----------QAYNSDTLGPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++++WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   VS
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   SVALT  G VY+ G     +LG    + +  P  ++G   +  V+ VA 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + +  +AC E     ++R+G +Y     
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYM---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  LG         P+ V G  + + + ++  S G  H   + + G +F++G G  G
Sbjct: 477 AYNSDTLG---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVFSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 146/303 (48%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+  V     +   AL  K        
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCG-DGGRLGHGD-TVPLEEPKMISALSGKQAGK---- 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 726 ----------TEDSEVHSWGSNDQCQ--HFDTLRITKPEPTALPGLDTKHIVGIACGPAQ 773

Query: 481 SVA 483
           S A
Sbjct: 774 SFA 776



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 96/182 (52%), Gaps = 5/182 (2%)

Query: 238  VESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
            VE+     V +IACG+  A  + +T    ++SWG+   G+LG G       P  I+ L+G
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 296  VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
            + V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V G L G  +  
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIA 4125

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G +  RV+CG  HT
Sbjct: 4126 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185

Query: 416  AA 417
             A
Sbjct: 4186 LA 4187



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 127/295 (43%), Gaps = 52/295 (17%)

Query: 263  GEIFSWGEESGGRLGHGREADVSHP------------QLI---------------EILSG 295
            G I+ WG    G+LG    A V  P            QLI               E L G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 296  VNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
              V  +AC  G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGV 4071

Query: 354  SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
              + CG   +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  
Sbjct: 4072 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL 4131

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            H                  T  G+++TWGD D+G+LG G       P  VA L  + I +
Sbjct: 4132 HCVCC--------------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4177

Query: 474  VACGHDLSVALTTS-----GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
            VACG   ++A +TS     G + T     Y  L  +P+        +   I+E F
Sbjct: 4178 VACGSAHTLAWSTSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLLLLHHISELF 4232



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 425  SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            SS   S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+
Sbjct: 2949 SSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSK 541
            T  G VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   K
Sbjct: 3009 TVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3068

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            V++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3124



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 8/146 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            +P  ++S   L V  + CG++ +V +TK G +++WG+    RLGHG +  V  P+ ++ L
Sbjct: 4059 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4118

Query: 294  SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             G  V  +A G  H    T  G++YTWGD   + G LG G+  +   PR V+  L G  +
Sbjct: 4119 QGKKVIAIATGSLHCVCCTEDGEVYTWGDN--DEGQLGDGTTNAIQRPRLVAA-LQGKKI 4175

Query: 354  SYISCG-----LWHTAVVTSAGHLFT 374
            + ++CG      W T+   +AG L T
Sbjct: 4176 NRVACGSAHTLAWSTSKPANAGKLPT 4201



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 19/228 (8%)

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            S GL   A + +   +F +G      LG        +P   ETL  L   +V+ G     
Sbjct: 2949 SSGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3006

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVA 475
            AV V               GK++  G+   GRLG G     +  P  +  L +  + +VA
Sbjct: 3007 AVTVE--------------GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3052

Query: 476  C--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
               G   ++ALT  G V++ G    G+LG          R+   +    + ++ACG+ H 
Sbjct: 3053 VHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            AA+TS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3113 AAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 471  ICQVACGHD--LSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVA 527
            +  +ACG     ++ LT    V++ G   YG+LG   +DG  VP ++D       V+ V 
Sbjct: 4017 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK-VE 4075

Query: 528  CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            CG+    ALT +  VYTWGKG   +LGHG  D+   P  V  L+ K+V  +  G
Sbjct: 4076 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4129


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3012

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3073 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3129

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3238 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3346

Query: 614  KR 615
             R
Sbjct: 3347 AR 3348



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 225/488 (46%), Gaps = 70/488 (14%)

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTN-----AFPDNS-- 167
           QGT  PL       L + F  II   +  NT      +++  SP  +       P ++  
Sbjct: 332 QGTSAPL-----LPLLQRFQSIICNKDMPNTEEDIQLLTYPLSPNESFLRYLTLPQDNEL 386

Query: 168 --NDRSSA----AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR 221
             + R +A    A   R++   +    S  ++H+   SL +V  WG              
Sbjct: 387 AIDLRQTAVVIMAHLDRLATPCMPPQCSSPTSHKG--SLQEVIAWG-------------L 431

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           +G+ +        P   E    L V  +AC  +  +++++ G +++              
Sbjct: 432 IGWKYYANVSG--PIQCEGLANLGVMQVACAEKRFLILSRNGRVYT----------QAYN 479

Query: 282 ADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           +D   PQL++ L+  N+  +A     +H  A++ +G++++WG G  + G LGHG  V   
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLE 537

Query: 340 IPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V  L+GL+   VSCG      + V            T  G++++WGDGD G+LG G  + 
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDG 645

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVD 515
              P+ +  L D +I +V CG   S+ALT  G VYT G     +LG    + +  P  ++
Sbjct: 646 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDK 573
           G   +  ++ VA G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K
Sbjct: 706 GLKGKKVID-VAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTK 762

Query: 574 QVKRVVCG 581
            +  + CG
Sbjct: 763 HIVGIACG 770



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3291 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3331



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDL+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4209

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4210 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4315

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4316 AHTLAW-STSKPANAGK 4331



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 161/330 (48%), Gaps = 35/330 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGE   +G LG G          ++    P+ +ES   ++V +IA G  H+  +T
Sbjct: 4063 GEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++F+WG+   GRLGHG   D   P+L+E L G  V  +AC  G+  T  +T    ++
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG       PR+V+ L+G +   ++ G  H                  T  G++
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC--------------TEDGEV 4275

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS-----GHVYTM 493
            +TWGD D+G+LG G       P  VA L  + I +VACG   ++A +TS     G + T 
Sbjct: 4276 YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQ 4335

Query: 494  GSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
                Y  L  +P+        +   I+E F
Sbjct: 4336 VPMEYNHLQEIPIISLRNRLLLLHHISELF 4365



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG      +G    A+VS P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YNS  LG    V     R   K++ + DG H  Y++        +++ G +F++G G  
Sbjct: 477 AYNSDTLGP-QLVQSLASRNIVKIAAHSDGHH--YLA--------LSANGEVFSWGCGDG 525

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G
Sbjct: 526 GRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAI--------------TAEG 571

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ LK K+V  V  G    L  T    +H W S+
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            G I+ WG    G+LG    A V  P   E L+ +    +  GE    AVT  G LY  G 
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI-----SCGLWHTAVVTSAGHLFTFGD 377
            G      +G    VS          L+ I   +I     + G  H   ++  G ++++G+
Sbjct: 4017 GAGGRLGIGGTESVS------TPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGE 4070

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
               G LGHG+      PR +E+LRG+    ++ G  H+A +              T+ G 
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACI--------------TAAGD 4116

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
            LFTWG G  GRLGHGD E +L P+ V  L    +  +ACG     ++ LT    V++ G 
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176

Query: 496  AAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG  VP ++D       V+ V CG+    ALT +  VYTWGKG   +LG
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLG 4235

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            HG  D+   P  V  L+ K+V  +  G
Sbjct: 4236 HGSDDHVRRPRQVQGLQGKKVIAIATG 4262



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  + +  +H +      + GD+F WG+G   G LG G+        
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSAC---ITAAGDLFTWGKG-RYGRLGHGDSE------ 4134

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4135 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4192 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4249

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4250 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4308

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4309 NRVACGSAHTLA 4320



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+  V     +   AL  K        
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCG-DGGRLGHGD-TVPLEEPKMISALSGKQA----GK 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++T+G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 726 ----------TEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLDTKHIVGIACGPAQ 773

Query: 481 SVA 483
           S A
Sbjct: 774 SFA 776



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3076

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4005

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL+ 
Sbjct: 4006 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSF 4061

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T+   ++TWG
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG 4121

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2988

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2989 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3048

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3049 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3105

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3106 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3153

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3213

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3214 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3269

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3270 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3322

Query: 614  KR 615
             R
Sbjct: 3323 AR 3324



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3933 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3982

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3983 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4042

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  I+ G  H+A +T+AG LFT+G G
Sbjct: 4043 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4099

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4100 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 4147

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4148 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4207

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4208 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4266

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4267 TNAIQRPRLVAALQGKKINRVACG 4290



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 2991 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3043

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G+IFSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3044 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3103

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3104 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3161 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3207 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3266

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3267 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3307



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 226/488 (46%), Gaps = 70/488 (14%)

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTN-----AFPDNS-- 167
           QGT  PL       L + F  I+   +  N+      +++  SP  +       P ++  
Sbjct: 308 QGTSAPL-----LPLLQRFQSIVCNKDVPNSEEEIQLLTYPLSPNESFLRYLTLPQDNEL 362

Query: 168 --NDRSSA----AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR 221
             + R +A    A   R++   +    S  ++H+   SL +V  WG              
Sbjct: 363 AIDLRQTAVVIMAHLDRLATPCMPPQCSSPTSHKG--SLQEVIAWG-------------L 407

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           +G+ +        P   E   +L V  IAC  +  +++++ G +++              
Sbjct: 408 IGWKYYANVSG--PIQCEGLASLGVVQIACAEKRFLILSRNGRVYT----------QAYN 455

Query: 282 ADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           +D   PQL++ L+  N+  +A     +H  A++ +G++++WG G  + G LGHG  V   
Sbjct: 456 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLE 513

Query: 340 IPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  
Sbjct: 514 EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 573

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V  L+GL+   VSCG            S  +     T  G++++WGDGD G+LG G  + 
Sbjct: 574 VTGLKGLKVIDVSCG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 621

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVD 515
              P+ +  L D +I +V CG   S+ALT  G VYT G     +LG    + +  P  ++
Sbjct: 622 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 681

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDK 573
           G   +  ++ VA G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K
Sbjct: 682 GLKGKKVID-VAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTK 738

Query: 574 QVKRVVCG 581
            +  + CG
Sbjct: 739 HIVGIACG 746



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4009 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4068

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDL+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4069 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4125

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4126 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4185

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4186 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4231

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4232 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4291

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4292 AHTLAW-STSKPANAGK 4307



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 167/346 (48%), Gaps = 35/346 (10%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGI 4072

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  G++F+WG+   GRLGHG   D   P+L+E L G  V  +AC 
Sbjct: 4073 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4132

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQF 4189

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4190 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4245

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4246 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295

Query: 483  ALTTS-----GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
            A +TS     G + T     Y  L  +P+        +   I+E F
Sbjct: 4296 AWSTSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLLLLHHISELF 4341



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG      +G    A+VS P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 401 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYT---Q 452

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YNS  LG    V     R   K++ + DG H  Y++        +++ G +F++G G  
Sbjct: 453 AYNSDTLGP-QLVQSLASRNIVKIAAHSDGHH--YLA--------LSANGEVFSWGCGDG 501

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G
Sbjct: 502 GRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAI--------------TAEG 547

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G
Sbjct: 548 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 607

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LG
Sbjct: 608 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 667

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ LK K+V  V  G    L  T    +H W S+
Sbjct: 668 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  + +  +H +      + GD+F WG+G   G LG G+        
Sbjct: 4061 DRPRVIESLRGIEVVDIAAGGAHSAC---ITAAGDLFTWGKG-RYGRLGHGDSE------ 4110

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4111 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4167

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4168 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4225

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4226 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4284

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4285 NRVACGSAHTLA 4296



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 145/303 (47%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+     +   +   L+          
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCG-DGGRLGHGD-----TVPLEEPKLISALSGKQAGK 528

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 529 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 588

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 645

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++T+G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 646 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL---- 701

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 702 ----------TEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLDTKHIVGIACGPAQ 749

Query: 481 SVA 483
           S A
Sbjct: 750 SFA 752



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2992

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   K+++WG
Sbjct: 2993 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3052

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3053 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3103



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3932 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3981

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3982 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4037

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T+   ++TWG
Sbjct: 4038 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG 4097

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4098 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4141


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/386 (36%), Positives = 199/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4207

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4208 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +A   +E+VA GA H  AL ST  VY WG  + GQLG 
Sbjct: 4268 --IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4324

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTLV  L+ K ++++  G
Sbjct: 4325 GHTNHVREPTLVTVLQGKNIRQISAG 4350



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4146 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4253

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  VA G + ++AL ++
Sbjct: 4254 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALAST 4308

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4309 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4155 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4214

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4215 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ V  G   T
Sbjct: 4274 RARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4210 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4266

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    V+ G  HT A+               S G ++
Sbjct: 4267 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4312

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4372

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4373 LQLGLPDA 4380



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4096

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4097 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4214

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4215 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3983 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4029

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSV----V 4193

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4194 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4253

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4254 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4311

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4312 HTNHVREPTLVTVLQGKNIRQISAG 4336



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S++LT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4132 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4188

Query: 369  AGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G  ++ FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4189 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4239

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4240 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4294

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4295 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4345



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3983 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4037

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4038 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4140

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV-YTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G V +  G   
Sbjct: 4141 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4200

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4201 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4259

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4260 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4288



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4086 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4135

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD-LYT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G  ++ 
Sbjct: 4136 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4195

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4196 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4252

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4253 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4298

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4299 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4358

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4359 LQLGLPDA 4366



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3983 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4036

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4082

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4083 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4142

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4200

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4201 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 201/386 (52%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3471 DVYLWGAG-----------RHGQLAEAGRNVMVPVAAPSFS--QAQQVVCGQNCTFVIQA 3517

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 3518 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3577

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 3578 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV---------SMDGSM----V 3681

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 3682 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3741

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   ++  F+E++A GA H  AL+ST  VY WG  + GQLG 
Sbjct: 3742 --IGLPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 3798

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTL+  L+ K ++++  G
Sbjct: 3799 GHTNHVREPTLITVLQGKNIRQISAG 3824



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 163/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     ++ +   S    + V CG+  T  +  +G +   G
Sbjct: 3471 DVYLWG---AGR--HGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACG 3525

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 3526 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3582

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKL
Sbjct: 3583 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKL 3628

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + +VA++  G  V+  G   
Sbjct: 3629 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGD 3688

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 3689 YGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 3747

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ +  G   T
Sbjct: 3748 RARNHNRPQQVPVLSGVFIEDIAVGAEHT 3776



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 3560 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3619

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V+ 
Sbjct: 3620 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSM 3676

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 3677 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL--------- 3727

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  +A G + ++AL+++
Sbjct: 3728 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSST 3782

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 3783 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 3833



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 3574 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 3623

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 3624 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWA 3683

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 3684 FGDGDY--GKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3740

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    ++ G  HT A+              +S G ++
Sbjct: 3741 LIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL--------------SSTGDVY 3786

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  +  L  +NI Q++ G   S A T         G +  
Sbjct: 3787 AWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 3846

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D + P
Sbjct: 3847 LQLGLP--DAIPP 3857



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 135/278 (48%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3471 DVYLWGAGRH--GQLAEAGR-NVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLAC 3524

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 3571

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T  G ++T 
Sbjct: 3572 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 3631

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H  A++   S V+ +G G  
Sbjct: 3632 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDY 3689

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 3690 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 3727



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L   +I Q++ G   S+A T
Sbjct: 710 KKVSGLDGVSIQQISAGTSHSLAWT 734



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 5/159 (3%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV--ACGHD-LSVALTTSGHVYT 492
            G +   G+G  GRLG G+ +       ++ L    + Q+  +CG D  S+ALT SG V++
Sbjct: 3519 GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFS 3578

Query: 493  MGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             G   YG+LG   +D    P +++    E  V+ ++CG  H A +T+  K++T+G G  G
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTADGKLFTFGNGDYG 3637

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +LG G+  N+  P  V  L+  Q+ +V CGLN T  + +
Sbjct: 3638 RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSM 3676



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVSIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4327 HTNHVREPTLVTVLQGKNIRQISAG 4351



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 179/362 (49%), Gaps = 39/362 (10%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL---DVHNIACGARHAVL 258
           +V++WG   ++  + G + ++          L PK     MAL   D   I  G     +
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPK-----MALSFSDAQTIEAGQYCTFV 417

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSG 315
           ++  G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 477

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           ++++WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+
Sbjct: 478 EVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G+G FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T  
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT-- 582

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
             ++++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G 
Sbjct: 583 --VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            A    G   A  L P  ++ E+A + + +++ G     AL   ++VY WG  + GQ G 
Sbjct: 641 GACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQ 699

Query: 556 GD 557
           G+
Sbjct: 700 GN 701



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4360



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P++   LS  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4374 LQLGLPDA 4381



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKMALSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +V+ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P+
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
            V   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 607 VVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G   +  + +  D+            +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIG--DSXCLALRHDN------------EVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+    A+    ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSXCLALRHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGT-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3954 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4064 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4168

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4169 WSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4229 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACG 4311



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG+   + +  P  ++G   +  ++ VA 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 156/317 (49%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4146

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G    + +P ++++L GL   +V C
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVEC 4206

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4207 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4312

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4313 AHTLAW-STSKPASAGK 4328



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LG 
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGL 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4130

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4131 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSK 4188

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4246

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4247 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4306 NRVACGSAHTLAW------STSKPA---SAGKL 4329



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LG G       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4007

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4055

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4174

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4175 DYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3081 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2951 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 3009 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4002

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4003 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4058

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3927 DVYLWGAG-----------RHGQLAEAGRNVMIPAAAPSFS--QAQQVICGQNCTFVIQA 3973

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4033

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4034 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4137

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4138 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4197

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E++A GA H  AL ST  VY WG  + GQLG G
Sbjct: 4198 --IGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4255

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTL+  L+ K ++++  G
Sbjct: 4256 HTNHVREPTLITILQGKNIRQISAG 4280



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 154/292 (52%), Gaps = 19/292 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4016 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHS 4075

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4076 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4132

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4133 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4183

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  +A G + ++AL ++
Sbjct: 4184 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALAST 4238

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T++
Sbjct: 4239 GDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWTAS 4290



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 162/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     +I     S    + V CG+  T  +  +G +   G
Sbjct: 3927 DVYLWG---AGR--HGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACG 3981

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 3982 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4038

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4039 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVV--------------TSDGKL 4084

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4085 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4144

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4145 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4203

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ +  G   T
Sbjct: 4204 RARNHNRPQQIPVLAGVVIEDIAVGAEHT 4232



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4030 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVIQMSCGFKHSAVVT 4079

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4080 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4139

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4140 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4196

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    ++ G  HT A+               S G ++
Sbjct: 4197 LIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLAL--------------ASTGDVY 4242

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  +  L  +NI Q++ G   S A T S       G +  
Sbjct: 4243 AWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWTASPVPPRAPGVSVP 4302

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4303 LQLGLP 4308



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  IP              + CG   T V+ + G +   
Sbjct: 3927 DVYLWGAGRH--GQLAEAGR-NVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 3980

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 4027

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 4028 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTF 4087

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G  
Sbjct: 4088 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4145

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4146 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4183



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGVAIQQISAGTSHSLAWT 734



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3990 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4036

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4097 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSV----V 4200

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4201 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4260

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4261 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4318

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4319 HTNHVREPTLVTVLQGKNIRQISAG 4343



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S++LT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4079 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4138

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4139 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4195

Query: 369  AGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G  ++ FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4196 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4246

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4247 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4301

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4302 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4352



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3990 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4044

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4045 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4147

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV-YTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G V +  G   
Sbjct: 4148 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4207

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4208 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4266

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4267 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4295



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4093 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4142

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD-LYT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G  ++ 
Sbjct: 4143 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4202

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4203 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4259

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4260 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4305

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4306 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4365

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4366 LQLGLPDA 4373



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3990 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4043

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4089

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4090 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4149

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4150 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4207

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4208 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4246



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 4002 DVYLWGAG-----------RHGQLAEAGRNVMIPAAAPSFS--QAQQVICGQNCTFVIQA 4048

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4049 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4108

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4109 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4212

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4213 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4272

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4273 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4330

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTL+  L+ K ++++  G
Sbjct: 4331 HTNHVREPTLITVLQGKNIRQISAG 4355



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A V+  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 154/292 (52%), Gaps = 19/292 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4091 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHS 4150

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4151 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4207

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4208 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4258

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4259 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4313

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T++
Sbjct: 4314 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAS 4365



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     +I     S    + V CG+  T  +  +G +   G
Sbjct: 4002 DVYLWG---AGR--HGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4056

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4057 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4113

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4114 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVV--------------TSDGKL 4159

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4160 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4219

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4220 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4278

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4279 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4307



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 150/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4105 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVIQMSCGFKHSAVVT 4154

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4155 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4214

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4215 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4271

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4272 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4317

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  +  L  +NI Q++ G   S A T S       G +  
Sbjct: 4318 AWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTASPVPPRAPGVSVP 4377

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D + P
Sbjct: 4378 LQLGLP--DAIPP 4388



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  IP              + CG   T V+ + G +   
Sbjct: 4002 DVYLWGAGRH--GQLAEAGR-NVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4055

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4101

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4102 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFT 4161

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4162 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4219

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4220 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4258



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  V++ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGVAIQQISAGTSHSLAWT 734



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 195/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV             ST    +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-------------STDGSMV 4207

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4208 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4268 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4326 HTNHVREPTLVTVLQGKNIRQISAG 4350



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  V+ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 162/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++T G  V+  G   
Sbjct: 4155 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGD 4214

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4215 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4274 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4302



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4146 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST 4202

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4253

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4254 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASN 4308

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4309 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4209

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4210 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4266

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4267 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASNGDVY 4312

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4372

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4373 LQLGLPDA 4380



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4096

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4097 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAAL-TSTSKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+ T  S V+ +G G 
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGD 4214

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4215 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ VE L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLVEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+L+E L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2947 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2994

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+I++ GE + GRLG G  +  +  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2995 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3054

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G 
Sbjct: 3055 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGL 3111

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3159

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3219

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3220 YFRLGHGTDVHVRK---PQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3275

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3276 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVTT-PSVHEPVLFQT 3328

Query: 614  KR 615
             R
Sbjct: 3329 AR 3330



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3940 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3989

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G++Y
Sbjct: 3990 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4049

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G+ +  I+ G  H+A +T++G LFT+G G
Sbjct: 4050 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELFTWGKG 4106

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ V+ L+G R   V+CG      + +  D              +
Sbjct: 4107 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------------MV 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4155 WSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDY 4214

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4215 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4273

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4274 TNAIQRPRLVAALQGKKINRVACG 4297



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 164/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 2997 GKIYACGEA-TNGRLGLGLSSGTIPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3049

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LY+W
Sbjct: 3050 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3109

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3110 GLGEY--GRLGHGDNATQLRPKLVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3166

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3167 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3212

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3213 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3272

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3273 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3313



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGV 4079

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  GE+F+WG+   GRLGHG   D   P+L++ L G  V  VAC 
Sbjct: 4080 EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4139

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C IP K+  +L G+ ++ + CG   
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDY--GKLGRGGSDGCKIPMKID-SLTGLGVTKVECGSQF 4196

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4197 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4252

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4253 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302

Query: 483  ALTTS 487
            A +TS
Sbjct: 4303 AWSTS 4307



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 42/344 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-D 322
           E+ +WG      LG    A+VS P   + LS + V  + C E     ++ SG +YT    
Sbjct: 410 EVIAWG-----LLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 464

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T  + +L H   +S     K++ + DG H  Y++        ++S G +F++G G  G 
Sbjct: 465 STTLAPMLIH--SLSSRKIVKLAAHPDGQH--YLA--------LSSNGEVFSWGCGDGGR 512

Query: 383 LGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           LGHGD      P  +    G +  +    ++CG  ++A + +               G+L
Sbjct: 513 LGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITID--------------GEL 558

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSA 496
           +TWG G+ GRLGHG  E +  P  V  L    +  VACG     ++A+T +G V++ G  
Sbjct: 559 YTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG 618

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LGHG
Sbjct: 619 DYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 678

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
             ++   P L+D L+ K+V  V  G    L  T    +H W S+
Sbjct: 679 TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 722



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 151/315 (47%), Gaps = 42/315 (13%)

Query: 180 SLSS--VVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLP 235
           SLSS  +V  ++H  G  +    S G+VF WG G   G LG G+     +   +   ++ 
Sbjct: 475 SLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCG-DGGRLGHGD-----ATYLEEPTMIA 528

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
                     V +IACG+ ++ ++T  GE+++WG  + GRLGHG   D + P L+  L G
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKG 588

Query: 296 VNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           + V  VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ V   L  + +
Sbjct: 589 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDI 645

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
             + CG   +  +T  G ++T+G G    LGHG       P+ ++TL+G +   V+ G  
Sbjct: 646 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGST 705

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-----KEPRLFPECVAPLID 468
           H  A+              T  G++ +WG  DK  L H D     K+P+  P        
Sbjct: 706 HCLAL--------------TDDGEVHSWGSNDK--LQHFDTLSNKKQPKALPGL------ 743

Query: 469 ENICQVACGHDLSVA 483
           ++I  ++CG   S A
Sbjct: 744 KHIVGISCGPGQSFA 758



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R + +  + +  +H +      + G++F WG+G   G LG G+        
Sbjct: 4068 DRPRVIESLRGVEVVDIAAGGAHSAC---ITASGELFTWGKG-RYGRLGHGDSE------ 4117

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4118 ---DQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 4174

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4175 IPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4232

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4233 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4291

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P   T+ GKL
Sbjct: 4292 NRVACGSAHTLAW------STSKP---TNAGKL 4315



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 415  TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDEN 470
            TA   +A   SS   S  T   K+F WG  DK +LG G K  ++    F E ++ L   N
Sbjct: 2924 TATGSLARKKSSGLESAGTIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---N 2979

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC- 528
            + QVA G     A+T  G +Y  G A  G+LG+ ++ G +P  R    ++   V++VA  
Sbjct: 2980 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVH 3039

Query: 529  -GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
             G  H  ALT   KV++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A 
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3099

Query: 588  IC----LHKW 593
            I     L+ W
Sbjct: 3100 ITSSGELYSW 3109



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3939 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV---------- 3988

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3989 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 4044

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T++ +++TWG
Sbjct: 4045 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4104

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LVD L+  +V  V CG      +CL
Sbjct: 4105 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4148


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2779

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+I++ GE + GRLG G  +  +  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2780 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 2839

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G 
Sbjct: 2840 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSAAITSSGELYSWGL 2896

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2897 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2944

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3004

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3005 YFRLGHGTDVHVRK---PQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3060

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3061 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVTT-PSVHEPVLFQT 3113

Query: 614  KR 615
             R
Sbjct: 3114 AR 3115



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 164/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 2782 GKIYACGEA-TNGRLGLGLSSGTIPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 2834

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LY+W
Sbjct: 2835 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSW 2894

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2895 GLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2951

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2952 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2997

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 2998 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3057

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3058 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3098



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 187/401 (46%), Gaps = 46/401 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3757 GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3806

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G++Y
Sbjct: 3807 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 3866

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G+ +  I+ G  H+A +T++G LFT+G G
Sbjct: 3867 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELFTWGKG 3923

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ V+ L+G R   V+CG      + +  D              +
Sbjct: 3924 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------------MV 3971

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3972 WSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDY 4031

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK---------------- 541
             +LG    D +  P +V G   +  +  +A G+ H    T   +                
Sbjct: 4032 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLG 4090

Query: 542  -VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             VYTWG    GQLG G  +    P LV  L+ K++ RV CG
Sbjct: 4091 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACG 4131



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 154/334 (46%), Gaps = 39/334 (11%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3892

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L GV V  +A G  H+  +T SG+L+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 3893 LRGVEVVDIAAGGAHSACITASGELFTWGKGRY--GRLGHGDSEDQLKPKLVDA-LQGHR 3949

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G       P ++++L GL   +V C
Sbjct: 3950 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVEC 4009

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4010 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4055

Query: 471  ICQVACGHDLSVALTTS-----------------GHVYTMGSAAYGQLGVPVADGLVPTR 513
            +  +A G    V  T                   G VYT G    GQLG    + +   R
Sbjct: 4056 VIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPR 4115

Query: 514  VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            +   +    +  VACG+ H  +  STSK    GK
Sbjct: 4116 LVAALQGKKINRVACGSAHTLSW-STSKPTNAGK 4148



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 167/344 (48%), Gaps = 42/344 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-D 322
           E+ +WG      LG    A+V+ P   + LS + V  + C E     ++ SG +YT    
Sbjct: 387 EVIAWG-----LLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 441

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T  + +L H   +S     K++ + DG H  Y++        ++S G +F++G G  G 
Sbjct: 442 STTLAPMLIH--SLSSRKMVKLAAHPDGQH--YLA--------LSSNGEVFSWGCGDGGR 489

Query: 383 LGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           LGHGD      P  +    G +  +    ++CG  ++AA+ V               G+L
Sbjct: 490 LGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVD--------------GEL 535

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSA 496
           +TWG G+ GRLGHG  E +  P  V  L    +  VACG     ++A+T +G V++ G  
Sbjct: 536 YTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG 595

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LGHG
Sbjct: 596 DYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 655

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
             ++   P L+D L+ K+V  V  G    L  T    +H W S+
Sbjct: 656 TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 699



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 151/316 (47%), Gaps = 41/316 (12%)

Query: 180 SLSS--VVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLP 235
           SLSS  +V  ++H  G  +    S G+VF WG G   G LG G+     +   +   ++ 
Sbjct: 452 SLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCG-DGGRLGHGD-----TTYLEEPTMIA 505

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
                     V +IACG+ ++  +T  GE+++WG  + GRLGHG   D + P L+  L G
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKG 565

Query: 296 VNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           + V  VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ V   L  + +
Sbjct: 566 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDI 622

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
             + CG   +  +T  G ++T+G G    LGHG       P+ ++TL+G +   V+ G  
Sbjct: 623 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGST 682

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLI 467
           H  A+              T  G++ +WG  DK  L H D      K+P+  P     L 
Sbjct: 683 HCLAL--------------TDDGEVHSWGSNDK--LQHFDTLFSNKKQPKALPG----LN 722

Query: 468 DENICQVACGHDLSVA 483
            ++I  ++CG   S A
Sbjct: 723 SKHIVGISCGPGQSFA 738



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 133/290 (45%), Gaps = 45/290 (15%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R + +  + +  +H +      + G++F WG+G   G LG G+        
Sbjct: 3885 DRPRVIESLRGVEVVDIAAGGAHSAC---ITASGELFTWGKG-RYGRLGHGDSE------ 3934

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3935 ---DQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 3991

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3992 TPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4049

Query: 346  GNLDGIHLSYISCGLWHTAVVTS-----------------AGHLFTFGDGSFGALGHGDH 388
            G L G  +  I+ G  H    T                   G ++T+GD   G LG G  
Sbjct: 4050 G-LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTT 4108

Query: 389  ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +   PR V  L+G +  RV+CG  HT          S S S  T+ GKL
Sbjct: 4109 NAIQRPRLVAALQGKKINRVACGSAHTL---------SWSTSKPTNAGKL 4149



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3756 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLF---AVTADGK 3810

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3811 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIRKVAVNSGGKHCLA 3858

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  +A G   S  +T SG ++
Sbjct: 3859 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 3918

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  VD  +    V +VACG+       LT    V++WG G
Sbjct: 3919 TWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 3977

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D   +P  +D L    V +V CG  F+  +
Sbjct: 3978 DYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 15/185 (8%)

Query: 420  VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVA 475
            +A   SS   S  T   K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA
Sbjct: 2714 LARKKSSGLESAGTIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVA 2769

Query: 476  CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYH 532
             G     A+T  G +Y  G A  G+LG+ ++ G +P  R    ++   V++VA   G  H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC--- 589
              ALT   KV++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A I    
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSG 2889

Query: 590  -LHKW 593
             L+ W
Sbjct: 2890 ELYSW 2894



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV---------- 3805

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3806 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 3861

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T++ +++TWG
Sbjct: 3862 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 3921

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LVD L+  +V  V CG      +CL
Sbjct: 3922 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 3965


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3075

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3076 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3135

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3136 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3192

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3193 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3240

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3300

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3301 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3356

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3357 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3409

Query: 614  KR 615
             R
Sbjct: 3410 AR 3411



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 4020 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4069

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4070 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4129

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4130 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4186

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4234

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4235 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4294

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4295 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4353

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4354 TNAIQRPRLVAALQGKKVNRVACG 4377



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3078 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3130

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3131 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3190

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3191 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3247

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3248 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3293

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3294 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3353

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3354 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3394



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 560

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 561 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 618

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 619 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 678

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 679 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 726

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 785

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 786 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 838



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4155

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4156 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4212

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4213 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4272

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4273 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4318

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4378

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4379 AHTLAW-STSKPASAGK 4394



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 493 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 544

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 545 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 594

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 595 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 640

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 641 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 700

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 701 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 760

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 761 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4148 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4196

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4197 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4254

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4255 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4312

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4313 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4371

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4372 NRVACGSAHTLA------WSTSKPA---SAGKL 4395



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 567 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 617

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 618 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 674

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 675 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 731

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 732 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 791

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 792 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSKHIVGI 835

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 836 ACGPAQSFA 844



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 15/168 (8%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA G     A+T  G VY+
Sbjct: 3027 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVAGGSKSLFAVTVEGKVYS 3082

Query: 493  MGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGA 549
             G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G 
Sbjct: 3083 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3142

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3143 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3190



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 4019 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4073

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4074 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4121

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4122 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4181

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4182 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4240

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4241 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4280



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 3017 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3074

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 3075 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3120

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3180

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3181 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3226



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4068

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4069 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4124

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4125 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4184

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4228


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3012

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3073 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3129

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3238 YFRLGHGTDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   + H P  F+ 
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PAVHEPVLFQT 3346

Query: 614  KR 615
             R
Sbjct: 3347 AR 3348



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 188/385 (48%), Gaps = 30/385 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3957 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A +T+AG LFT+G G
Sbjct: 4067 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 4171

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA- 497
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT      
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRD 4231

Query: 498  YGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            Y +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G
Sbjct: 4232 YHRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              +    P LV  L+ K++ RV CG
Sbjct: 4291 TTNAIQRPRLVAALQGKKINRVACG 4315



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 226/488 (46%), Gaps = 70/488 (14%)

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTN-----AFPDNS-- 167
           QGT  PL       L + F  II   +A NT      +++  SP  +       P ++  
Sbjct: 332 QGTSAPL-----LPLLQRFQSIICNKDAPNTEEEIQLLTYPLSPNESFLRYLTLPQDNEL 386

Query: 168 --NDRSSA----AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR 221
             + R +A    A   R++   +    S  ++H+   SL +V  WG              
Sbjct: 387 AIDLRQTAVVIMAHLDRLATPCMPPQCSSPTSHKG--SLQEVIAWG-------------L 431

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           +G+ +        P   E    L V  +AC  +  +++++ G +++              
Sbjct: 432 IGWKYYANVSG--PIQCEGLANLGVVQVACAEKRFLILSRNGRVYT----------QAYN 479

Query: 282 ADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           +D   PQL++ L+  N+  +A     +H  A++ +G++++WG G  + G LGHG  V   
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLE 537

Query: 340 IPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V  L+GL+   VSCG            S  +     T  G++++WGDGD G+LG G  + 
Sbjct: 598 VTGLKGLKVIDVSCG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVD 515
              P+ +  L D +I +V CG   S+ALT  G VYT G     +LG    + +  P  ++
Sbjct: 646 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDK 573
           G   +  ++ VA G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K
Sbjct: 706 GLKGKKVID-VAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTK 762

Query: 574 QVKRVVCG 581
            +  + CG
Sbjct: 763 HIVGIACG 770



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 166/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3291 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3331



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 153/318 (48%), Gaps = 23/318 (7%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  +T +GDL+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4093 LRGIEVVDVAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4209

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD-GDKGRLGHGDKEPRLFPECVAPLIDE 469
            G   + A+              T  G ++TW    D  RLGHG  +    P  V  L  +
Sbjct: 4210 GSQFSVAL--------------TKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGK 4255

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG
Sbjct: 4256 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACG 4315

Query: 530  AYHVAALTSTSKVYTWGK 547
            + H  A  STSK    GK
Sbjct: 4316 SAHTLAW-STSKPANAGK 4332



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG      +G    A+VS P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YNS  LG    V     R   K++ + DG H  Y++        +++ G +F++G G  
Sbjct: 477 AYNSDTLGP-QLVQSLASRNIVKIAAHSDGHH--YLA--------LSANGEVFSWGCGDG 525

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G
Sbjct: 526 GRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAI--------------TAEG 571

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ LK K+V  V  G    L  T    +H W S+
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 166/349 (47%), Gaps = 40/349 (11%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGI 4096

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V ++A G  H+  +T  G++F+WG+   GRLGHG   D   P+L+E L G  V  +AC 
Sbjct: 4097 EVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQF 4213

Query: 363  TAVVTSAGHLFT---FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +  +T +G ++T   F D  +  LGHG       PR+V+ L+G +   ++ G  H     
Sbjct: 4214 SVALTKSGAVYTWQVFRD--YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC- 4270

Query: 420  VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                         T  G+++TWGD D+G+LG G       P  VA L  + I +VACG  
Sbjct: 4271 -------------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSA 4317

Query: 480  LSVALTTS-----GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
             ++A +TS     G + T     Y  L  +P+        +   I+E F
Sbjct: 4318 HTLAWSTSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLLLLHHISELF 4366



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+  V     +   AL  K        
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCG-DGGRLGHGD-TVPLEEPKMISALSGKQA----GK 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++T+G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 726 ----------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGIACGPAQ 773

Query: 481 SVA 483
           S A
Sbjct: 774 SFA 776



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 123/252 (48%), Gaps = 18/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD+F WG+G   G LG G+        
Sbjct: 4085 DRPRVIESLRGIEVVDVAAGGAHSAC---ITAAGDLFTWGKG-RYGRLGHGDSE------ 4134

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4135 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTW     +   LGHGS      PR+V 
Sbjct: 4192 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTW-QVFRDYHRLGHGSDDHVRRPRQVQ 4250

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4251 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4309

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4310 NRVACGSAHTLA 4321



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 310  AVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A T    ++ WG  D     GL G   KV  +     S  L  +++  ++ G      VT
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3012

Query: 368  SAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
              G ++  G+ + G LG G    T  IPR++  L      +V+       A+ +  D   
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD--- 3069

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                     GK+F+WG+GD G+LGH  +     P  +  L  + I  +ACG   S A+T+
Sbjct: 3070 ---------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAY--HVAALTSTS 540
            SG +YT G   YG+LG     G   T++  ++ +      V +VACG+      ALT   
Sbjct: 3121 SGELYTWGLGEYGRLG----HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             V++WG G  G+LG G  +  N P  ++ L  + V ++ CG  F+
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3076

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4010

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4058

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G ++
Sbjct: 4059 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLF 4118

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4005

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4006 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4061

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   ++TWG
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWG 4121

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 199/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       +A+ P    S        + CG     ++  
Sbjct: 4089 DVFLWGAG-----------RHGQLAEAGRNAVSPPPSPSFC--QAQQVICGQNCTFVIQA 4135

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4136 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4195

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 4196 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4252

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +   V+CG+ HT  +VV+TD S            +
Sbjct: 4253 DYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHT--LVVSTDGS-----------MV 4299

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4300 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4359

Query: 499  GQLGVPVADGLVPTRVDGEIAES--FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R     A S  FVE++A GA H  AL+++  VY WG  + GQLG G
Sbjct: 4360 --IGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLG 4417

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4418 HTNHVREPTLVTSLQGKSVRQISAG 4442



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 422

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 423 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 482

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 483 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 540

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 541 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 585

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 586 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 645

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 646 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 703



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 154/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4178 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4237

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT VV++
Sbjct: 4238 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVST 4294

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4295 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL--------- 4345

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    +  +A G + ++AL+ S
Sbjct: 4346 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSAS 4400

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA +S
Sbjct: 4401 GDVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSS 4451



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 160/327 (48%), Gaps = 26/327 (7%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++F WG    G+L       VS P      S    + V CG+  T  +  +G +   G+G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAVSPP---PSPSFCQAQQVICGQNCTFVIQANGTVLACGEG 4145

Query: 324  TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDGSF 380
            +Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG +
Sbjct: 4146 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202

Query: 381  GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKLFT
Sbjct: 4203 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKLFT 4248

Query: 441  WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAYG 499
            +G+GD GRLG G+   +  PE VA L    I +VACG + ++ ++T G  V+  G   YG
Sbjct: 4249 FGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYG 4308

Query: 500  QLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G  
Sbjct: 4309 KLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4367

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             N N P  V  L    V+ +  G   T
Sbjct: 4368 RNHNRPQQVPALSGVFVEDIAVGAEHT 4394



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D++ WG G +  G L    + +   P   S          + CG   T V+ + G +   
Sbjct: 4089 DVFLWGAGRH--GQLAEAGRNAVSPPPSPSF----CQAQQVICGQNCTFVIQANGTVLAC 4142

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4188

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T  G ++T
Sbjct: 4189 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFT 4248

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL-TSTSKVYTWGKGAN 550
             G+  YG+LG+   ++  +P RV   +    + EVACG  H   + T  S V+ +G G  
Sbjct: 4249 FGNGDYGRLGLGNTSNKKLPERV-AALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDY 4307

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4308 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4192 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4241

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT  V+  G + + 
Sbjct: 4242 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWA 4301

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4302 FGDGDY--GKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4358

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    ++ G  HT A+              ++ G ++
Sbjct: 4359 LIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLAL--------------SASGDVY 4404

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +++ Q++ G   S A ++        G +  
Sbjct: 4405 AWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSSPPVPPRAPGVSVP 4464

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4465 LQLGLPDA 4472



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 441 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 496

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 497 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 551

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 552 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 607

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 608 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 665

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 666 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 711

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 712 KKVSGLDGVAIQQISAGTSHSLAWT 736



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 563 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 613

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 614 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 671

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 672 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVAIQQISAG 728

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 729 TSHSLAWTA 737


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 237/477 (49%), Gaps = 55/477 (11%)

Query: 148  RADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWG 207
            RAD    +  P   +  +  +D  +AA +     SS + S++             VF+WG
Sbjct: 2876 RADEEDLATVPFLASDNEEEDDEKTAAGSLARKKSSGLESAASIRTK--------VFVWG 2927

Query: 208  EGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEI 265
                +  G L G + +V            P   E+  AL+V  +A G++    VT +G+I
Sbjct: 2928 LNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2975

Query: 266  FSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGD 322
            ++ GE + GRLG G  +  +  P+ I  LS   V+ VA   G  H  A+T  G +++WG+
Sbjct: 2976 YACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3035

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G G +G 
Sbjct: 3036 G--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G +F+WG
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GLVFSWG 3140

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
            DGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   Y +LG
Sbjct: 3141 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3200

Query: 503  ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
                V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ G+G  
Sbjct: 3201 HGTDVHVRK---PQIVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3256

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
                 PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+  R
Sbjct: 3257 TVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVTT-PSVHEPVLFQTAR 3306



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3895 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3944

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3945 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4004

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G+ +  I+ G  H+A +T++G LFT+G G
Sbjct: 4005 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELFTWGKG 4061

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ V+ L+G R   V+CG      + +  D              +
Sbjct: 4062 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------------MV 4109

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4110 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4169

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4170 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4228

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4229 TNAIQRPRLVAALQGKKINRVACG 4252



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4030

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L GV V  +A G  H+  +T SG+L+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4031 LRGVEVVDIAAGGAHSACITASGELFTWGKGRY--GRLGHGDSEDQLKPKLVDA-LQGHR 4087

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4088 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4147

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4148 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4193

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4194 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4253

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4254 AHTLAW-STSKPTNAGK 4269



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGV 4034

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  GE+F+WG+   GRLGHG   D   P+L++ L G  V  VAC 
Sbjct: 4035 EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4094

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQF 4151

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4152 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4207

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4208 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257

Query: 483  ALTTS 487
            A +TS
Sbjct: 4258 AWSTS 4262



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 42/344 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-D 322
           E+ +WG      LG    A+V  P   + LS   V  + C E     ++RSG +YT    
Sbjct: 375 EVIAWG-----LLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK 429

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T  + +L HG  +S     K++ + DG H   +S          ++G ++++G G  G 
Sbjct: 430 STTLAPMLIHG--LSSRKIVKLAAHPDGQHFLALS----------TSGEVYSWGCGDGGR 477

Query: 383 LGHGDHISTSIPREVETLRGLRT----TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           LGHGD      P  + T  G +T     +++CG  ++AAV              T+ G+L
Sbjct: 478 LGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAV--------------TADGEL 523

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSA 496
           +TWG G+ GRLGHG  E    P  V  L  + +  VACG     ++A+T +G V++ G  
Sbjct: 524 YTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDG 583

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LGHG
Sbjct: 584 DYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 643

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
             ++   P L+D L+ K+V  +  G    L  T    +H W S+
Sbjct: 644 TDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSN 687



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 35/290 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG G   G LG G+     +   +  AL+           V  IACG+ ++  VT
Sbjct: 465 GEVYSWGCG-DGGRLGHGD-----ATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVT 518

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
             GE+++WG  + GRLGHG   DV+ P L+  L G  V  VAC  G+  T AVT +G ++
Sbjct: 519 ADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVW 578

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LG G    C  P+ V   L  + +  + CG   +  +T  G ++T+G G
Sbjct: 579 SWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
               LGHG       P+ +++L+G +   ++ G  H  A+              T  G++
Sbjct: 636 DNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLAL--------------TDEGEV 681

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAP-----LIDENICQVACGHDLSVA 483
            +WG  DK  L H D    LFP    P     L  ++I  ++CG   S A
Sbjct: 682 HSWGSNDK--LQHFDT---LFPNKKQPKALPGLNSKHIVGISCGPGQSFA 726



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R + +  + +  +H +      + G++F WG+G   G LG G+        
Sbjct: 4023 DRPRVIESLRGVEVVDIAAGGAHSAC---ITASGELFTWGKG-RYGRLGHGDSE------ 4072

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4073 ---DQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 4129

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4130 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4187

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4188 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4246

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4247 NRVACGSAHTLA 4258



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3894 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLF---AVTADGK 3948

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3949 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3996

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  +A G   S  +T SG ++
Sbjct: 3997 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 4056

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  VD  +    V +VACG+       LT    V++WG G
Sbjct: 4057 TWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4115

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4116 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4155



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3894 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV---------- 3943

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3944 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3999

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T++ +++TWG
Sbjct: 4000 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4059

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LVD L+  +V  V CG      +CL
Sbjct: 4060 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4103


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/390 (35%), Positives = 200/390 (51%), Gaps = 46/390 (11%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       + ++P    S        + CG     ++  
Sbjct: 3979 DVFLWGAG-----------RHGQLAEAGRNVMIPSGAGSFS--QAQQVICGQNCTFVIQA 4025

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4026 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4085

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 4086 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L GL   +V+CG+ HT AV         S  GS     +
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV---------SADGSL----V 4189

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4190 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4249

Query: 499  GQLGVPVADG-------LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
              +G+P           LVP      +   F++++A GA H  AL+++ +VY WG  + G
Sbjct: 4250 --IGLPEGRARNHNRPQLVPV-----LLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEG 4302

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            QLG G  ++   PTLV  L+ K ++++  G
Sbjct: 4303 QLGLGHTNHVREPTLVTALQGKNIRQISAG 4332



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 177/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK        D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPCFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L      +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 156/291 (53%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4068 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4127

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G+H+  ++CGL HT  V++
Sbjct: 4128 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSA 4184

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G L + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4185 DGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4235

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L+   I  +A G + ++AL+ S
Sbjct: 4236 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSAS 4290

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4291 GEVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 164/329 (49%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLYTWG 321
            ++F WG    GR  HG+ A+     +I   +G     + V CG+  T  +  +G +   G
Sbjct: 3979 DVFLWG---AGR--HGQLAEAGRNVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACG 4033

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4034 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4090

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKL
Sbjct: 4091 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKL 4136

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L   +I QVACG + ++A++  G  V+  G   
Sbjct: 4137 FTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGD 4196

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4197 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4255

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P LV  L    +  +  G   T
Sbjct: 4256 RARNHNRPQLVPVLLGIFIDDIAVGAEHT 4284



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 28/298 (9%)

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G +
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGHLF 373
              G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G +F
Sbjct: 425 RACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGEVF 480

Query: 374 TFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           ++GDG +G LGHG+  +   P+ ++ TL+G     VS G  H+AAV              
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAV-------------- 526

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VY 491
           T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  V+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVW 584

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           + G    G+LG    + +   +V   +   F  +V  G+    ALTST +VY WG GA
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4082 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4131

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G+++  VACG  HT AV+  G L + 
Sbjct: 4132 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWA 4191

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4192 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4248

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+ V  L G+    ++ G  HT A+              ++ G+++
Sbjct: 4249 LIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLAL--------------SASGEVY 4294

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T +       G A  
Sbjct: 4295 AWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTAAPVPPRAPGVAVP 4354

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4355 LQLGLP 4360



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 140/278 (50%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D++ WG G +  G L    + +  IP   SG         + CG   T V+ + G +   
Sbjct: 3979 DVFLWGAGRH--GQLAEAGR-NVMIP---SGAGSFSQAQQVICGQNCTFVIQANGTVLAC 4032

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4078

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T  G ++T
Sbjct: 4079 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFT 4138

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTWGKGAN 550
             G+  YG+LG+   ++  +P RV   +    + +VACG  H  A+++  S V+ +G G  
Sbjct: 4139 FGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDY 4197

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4198 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 35/326 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHN-IACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
                  +    PK ++ T+   V   ++ G RH+  VT+ GE+++WGE   GRLGHG  
Sbjct: 495 ------SSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS 548

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
              + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P
Sbjct: 549 NSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP 605

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETL 400
           + V   L G+    +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L
Sbjct: 606 KVVEA-LQGMFTRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEEL 662

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLF 459
              R   +S G  H  A+              +   +++ WG+   G+ G G+   P   
Sbjct: 663 AATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITK 708

Query: 460 PECVAPLIDENICQVACGHDLSVALT 485
           P+ V+ L    I Q++ G   S+A T
Sbjct: 709 PKKVSGLDGVAIQQISAGTSHSLAWT 734



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             +    +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3954 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4064 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4168

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4229 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACG 4311



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4146

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4207 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4312

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4313 AHTLAW-STSKPASAGK 4328



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4130

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4131 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4188

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4246

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4247 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4306 NRVACGSAHTLAW------STSKPA---SAGKL 4329



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3081 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4007

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4055

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4174

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4175 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2951 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 3009 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4002

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4003 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4058

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3014

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3015 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3074

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3075 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3131

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3132 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3179

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3239

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3240 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3295

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3296 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3348

Query: 614  KR 615
             R
Sbjct: 3349 AR 3350



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3959 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4008

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4009 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4068

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4069 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4125

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4173

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4174 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4233

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4234 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4292

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4293 TNAIQRPRLVAALQGKKVNRVACG 4316



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3017 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3069

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3070 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3129

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3130 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3186

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3187 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3232

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3233 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3292

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3293 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3333



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 497

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 498 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 555

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 556 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 615

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 616 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 663

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 722

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 723 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 775



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4094

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4095 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4151

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4152 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4211

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4212 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4257

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4258 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4317

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4318 AHTLAW-STSKPASAGK 4333



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 430 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 481

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 482 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 531

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 532 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 577

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 578 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 637

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 638 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 697

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 698 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4087 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4135

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4136 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4193

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4194 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4251

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4252 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4310

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4311 NRVACGSAHTLAW------STSKPA---SAGKL 4334



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 504 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 554

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 555 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 611

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 612 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 668

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 669 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 728

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 729 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSKHIVGI 772

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 773 ACGPAQSFA 781



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3025

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3026 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3085

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3086 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3129



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3958 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4012

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4013 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4060

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4061 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4120

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4121 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4179

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4180 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4219



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2956 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3013

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 3014 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3059

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3119

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3120 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3165



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4007

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4008 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4063

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4064 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4123

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4124 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4167


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2952

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2953 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3012

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3013 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3069

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3070 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3117

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3177

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3178 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3233

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3234 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3286

Query: 614  KR 615
             R
Sbjct: 3287 AR 3288



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3897 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3947 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4007 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4111

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4112 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4171

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4172 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4230

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4231 TNAIQRPRLVAALQGKKVNRVACG 4254



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2955 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3007

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3008 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3067

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3068 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3125 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3170

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3171 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3230

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3231 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3271



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 437

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 438 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 495

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 556 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 662

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 663 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4033 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4089

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4090 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4149

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4150 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4195

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4196 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4255

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4256 AHTLAW-STSKPASAGK 4271



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 421

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 422 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 471

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 517

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 518 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 577

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 578 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 637

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 638 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4025 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4073

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4074 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4131

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4132 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4189

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4190 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4248

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4249 NRVACGSAHTLA------WSTSKPA---SAGKL 4272



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 444 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 494

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 495 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 551

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 552 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 608

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 609 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 668

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 669 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDTKHIVGI 712

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 713 ACGPAQSFA 721



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 2963

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 2964 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3024 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3067



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3896 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3950

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3951 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3998

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3999 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4058

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4117

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4118 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2894 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 2951

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 2952 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3057

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3058 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3103



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3945

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3946 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4001

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4002 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4061

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4062 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3954 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4064 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4168

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4229 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACG 4311



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  +AC  +  +++++ G +++              +D+  PQL++ L+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4146

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4207 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4312

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4313 AHTLAW-STSKPASAGK 4328



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4130

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4131 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4188

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4246

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4247 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4306 NRVACGSAHTLA------WSTSKPA---SAGKL 4329



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3021 TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3081 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4007

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4055

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4174

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4175 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 19/228 (8%)

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            + GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     
Sbjct: 2949 TAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3006

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVA 475
            AV V               GK+++ G+   GRLG G     +  P  +  L    + +VA
Sbjct: 3007 AVTVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA 3052

Query: 476  C--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
               G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H 
Sbjct: 3053 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            AALTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4002

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4003 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4058

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 198/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 4003 DVYLWGAG-----------RHGQLAEAGRNVMIPAGAPSFS--QAQQVICGQNCTFVIQA 4049

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4050 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4109

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G +FTFG+G
Sbjct: 4110 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKMFTFGNG 4166

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV             ST    +
Sbjct: 4167 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-------------STDGSMV 4213

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4214 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4273

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +A   +E+VA GA H  A+TST  VY WG  + GQLG 
Sbjct: 4274 --IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGL 4330

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTL+  L+ K ++++  G
Sbjct: 4331 GHTNHVREPTLITVLQGKNIRQISAG 4356



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  V+ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4092 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4151

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G ++T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4152 AVVTADGKMFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST 4208

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4209 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4259

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  VA G + ++A+T++
Sbjct: 4260 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITST 4314

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4315 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4365



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 30/332 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEI--LSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR  HG+ A+     +I     S    + V CG+  T  +  +G +   G
Sbjct: 4003 DVYLWG---AGR--HGQLAEAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACG 4057

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4058 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4114

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GK+
Sbjct: 4115 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKM 4160

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++T G  V+  G   
Sbjct: 4161 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGD 4220

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4221 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4279

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               N N P  V  L    ++ V  G   T  I
Sbjct: 4280 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAI 4311



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4106 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4155

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4156 ADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWA 4215

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4216 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4272

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    V+ G  HT A+              TS G ++
Sbjct: 4273 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAI--------------TSTGDVY 4318

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  +  L  +NI Q++ G   S A T         G +  
Sbjct: 4319 AWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4378

Query: 499  GQLGVPVADGLVP 511
             QLG+P  DG+ P
Sbjct: 4379 LQLGLP--DGIPP 4389



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ VE L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLVEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGVAIQQISAGTSHSLAWT 734



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+L+E L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDG+ +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGVAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 194/383 (50%), Gaps = 27/383 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P A+ES  +L    I  G +    VT
Sbjct: 3181 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTAIESLTSLRPIQIVGGEQTLFAVT 3230

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  + GRLG G    VS P L+E +  V+++ VA   G  H  A++  G++Y
Sbjct: 3231 ADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVY 3290

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++  C  PR +  +L G  +  I+CG  H+A VTS+G L+T+G G
Sbjct: 3291 SWGEG--EDGKLGHGNRTQCDRPRVIE-SLRGKEVIDIACGGAHSACVTSSGELYTWGKG 3347

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+  + L+G R   V+CG   +  + ++ D +            +
Sbjct: 3348 RYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDN------------V 3395

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P+ V  L    +C+V CG   S+ALT SG VYT G   Y
Sbjct: 3396 WSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDY 3455

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    D +   R    +    +  +A G+ H  A +   +VYTWG    GQLG G  
Sbjct: 3456 HRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTT 3515

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
            +    P +V  L+DK++  V CG
Sbjct: 3516 NAIQRPRIVTALQDKKITNVACG 3538



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 219/453 (48%), Gaps = 39/453 (8%)

Query: 165  DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
            DN +D  +   T R+S S   S+  HG + E       VF+WG    +  LGG       
Sbjct: 2175 DNEDDHGTNMMT-RLS-SRQRSAGDHGGSRE---IQTKVFVWGLNDKDQ-LGG------- 2221

Query: 225  SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
               R +    P   E   +L V   A G++   +VT +G++++ GE + GRLG G   +V
Sbjct: 2222 --PRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNV 2279

Query: 285  SHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
              P+ +  LS   V+ VA   G  H  A+T  G +++WG+G  + G LGH S+++C  PR
Sbjct: 2280 DIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEG--DDGKLGHLSRMNCEKPR 2337

Query: 343  KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
             +   L    +  I+CG  H+A VTS+G L+T+G G +G LGHGD  +   P+ V+ L G
Sbjct: 2338 LLEA-LKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVG 2396

Query: 403  LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
             R  +V+CG    A  +  TD            G +++WGDGD G+LG G  E    P  
Sbjct: 2397 KRVIQVACGS-RDAQTLTLTDE-----------GMVYSWGDGDFGKLGRGGSEGCSVPHN 2444

Query: 463  VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
            V  L  + + Q+ CG   S+ALT +G V+T G   Y +LG      +   +V   +    
Sbjct: 2445 VERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKK 2504

Query: 523  VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
            +  VA GA H  A+T T +V+ WG   +GQ G G       P LV  L+  ++ RV CG 
Sbjct: 2505 IIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGS 2564

Query: 583  NFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
            + +       W ++   +   S H P  F   R
Sbjct: 2565 SHST-----AWATT--DTAIPSMHEPVLFTTPR 2590



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 185/391 (47%), Gaps = 41/391 (10%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S  T  LL    ES   + +  +A   G +HA+ ++ +GE
Sbjct: 3233 GKLYATGYGASGRLGIGGTDSVSTPTLL----ESIQHVHIKKVAVNSGGKHALALSVEGE 3288

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P++IE L G  V  +ACG  H+  VT SG+LYTWG G 
Sbjct: 3289 VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGR 3348

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW--HTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P K++  L G  +  ++CG     T  ++   +++++GDG +G 
Sbjct: 3349 Y--GRLGHGDSEDQLRP-KMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGK 3405

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      +P++V+ L  +   +V CG   + A+              T  G ++TWG
Sbjct: 3406 LGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIAL--------------TKSGCVYTWG 3451

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA +  G VYT G    GQLG
Sbjct: 3452 KGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                + +   R+   + +  +  VACG+ H  A +++  +            H  +  + 
Sbjct: 3512 DGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPL------------HAGRLPQT 3559

Query: 563  SPTLVDFLKDKQV----KRVVCGLNFTAIIC 589
             P   + L++  +     R+V   +F+ + C
Sbjct: 3560 VPMEYNLLREVNIPVIRNRLVLLHHFSELFC 3590



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 25/288 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +P  +  +L  +    I  G      VT+ G 
Sbjct: 3180 SGTIYGWGHN--HRGQLGGIEGAKVK--VPTAIE-SLTSLRPIQIVGGEQTLFAVTADGK 3234

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++ +   +V+       A+ ++ +        
Sbjct: 3235 LYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVE-------- 3286

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                G++++WG+G+ G+LGHG++     P  +  L  + +  +ACG   S  +T+SG +Y
Sbjct: 3287 ----GEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELY 3342

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            T G   YG+LG   ++  +  ++   +    V +VACG+       ++    V++WG G 
Sbjct: 3343 TWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGD 3402

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
             G+LG G  D    P  VD L    V +V CG  F+  +    C++ W
Sbjct: 3403 YGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTW 3450



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 10/118 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG+G          HR+G+          P+ V +     + +IA G+ H V  +
Sbjct: 3445 GCVYTWGKG--------DYHRLGHGSDDHVRR--PRKVAALQGKKIISIATGSLHCVACS 3494

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             QGE+++WG+   G+LG G    +  P+++  L    +  VACG  HT A + S  L+
Sbjct: 3495 DQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 507 DGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
           D L P  V G   + FV  +A G+      A+T T  ++++G G  G+LG G  D    P
Sbjct: 4   DQLTPKLVSGLKEQKFVH-IALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLP 62

Query: 565 TLVDFLKDKQVKRVVCGLNFTAII--------CL-HKWVSSVDHSVCSSCHNPFGFRRKR 615
            LVD L+ +      CG  F+ I+        CL   W SS   SV    H PF     R
Sbjct: 63  KLVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSV--GLHVPFSVDVTR 120

Query: 616 HNCYNCGLVFCKAC 629
                  L+  + C
Sbjct: 121 TTFEKLDLLLQRVC 134



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
           T ++  G+     V +A  S+       T  G LF++G+GD G+LG G  +    P+ V 
Sbjct: 7   TPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVD 66

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYT-----MGSAAYGQLGVPVADGLVPTRVDGEIA 519
            L  ++     CG+  SV LT +G VYT       S+A+  +G+ V   +  TR   E  
Sbjct: 67  KLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVGLHVPFSVDVTRTTFEKL 126

Query: 520 ESFVEEVACG 529
           +  ++ V  G
Sbjct: 127 DLLLQRVCEG 136



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 231 DALLPKAVESTMALDVHNIACGAR--HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           D L PK V         +IA G+     + VT  G +FS+G    G+LG G       P+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           L++ L G +  +  CG   +  +T++G +YT
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 287 PQLIEILSGVNVELVACG--EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P+L+  L       +A G  +  T AVT +G L+++G+G Y  G LG G    C +P+ V
Sbjct: 8   PKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDY--GKLGRGGSDGCKLPKLV 65

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
              L G H     CG   + ++T  G ++T
Sbjct: 66  D-KLQGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            T  VT  G LF+FG+G +G LG G      +P+ V+ L+G       CG
Sbjct: 30  QTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCG 79


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3005

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+I++ GE + GRLG G  +  +  P+ I  LS   ++ VA   G  H  A+T  G +
Sbjct: 3006 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G 
Sbjct: 3066 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGL 3122

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3123 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GF 3170

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3230

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3231 YFRLGHGTDVHVRK---PQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3286

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3287 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVTT-PSVHEPVLFQT 3339

Query: 614  KR 615
             R
Sbjct: 3340 AR 3341



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P + E+   L    +  G +    VT
Sbjct: 3951 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTSTEALATLRPVQLIGGEQTLFAVT 4000

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G++Y
Sbjct: 4001 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4060

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G+ +  I+ G  H+A +T++G LFT+G G
Sbjct: 4061 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELFTWGKG 4117

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ V+ L+G R   V+CG      + +  D              +
Sbjct: 4118 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------------MV 4165

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4166 WSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4225

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4226 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4284

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4285 TNAIQRPRLVAALQGKKINRVACG 4308



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 162/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GE   NG LG G         RQ  AL      S   +    +  G RHA+ +T
Sbjct: 3008 GKIYACGEA-TNGRLGLGLSSGTIPIPRQITAL------SNYVIKKVAVHSGGRHAMALT 3060

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LY+W
Sbjct: 3061 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3120

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3121 GLGEY--GRLGHGDNTTQLRPKLVKVLL-GHRVIQVACGSRDAQTLALTDEGFVFSWGDG 3177

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3178 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3223

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3224 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3283

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3284 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3324



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L GV V  +A G  H+  +T SG+L+TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4087 LRGVEVVDIAAGGAHSACITASGELFTWGKGRY--GRLGHGDSEDQLKPKLVDA-LQGHR 4143

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      IP ++++L GL   +V C
Sbjct: 4144 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVEC 4203

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4204 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4249

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4250 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4309

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4310 AHTLAW-STSKPTNAGK 4325



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 179/382 (46%), Gaps = 54/382 (14%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGV 4090

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  GE+F+WG+   GRLGHG   D   P+L++ L G  V  VAC 
Sbjct: 4091 EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4150

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C IP K+  +L G+ +  + CG   
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDY--GKLGRGGSDGCKIPMKID-SLTGLGVVKVECGSQF 4207

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4208 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4263

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4264 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313

Query: 483  ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--------YHVA 534
            A +TS                P   G +P +V  E   + ++E+   A        +H++
Sbjct: 4314 AWSTSK---------------PTNAGKLPAQVPMEY--NHLQEIPIMALRNRLVLLHHIS 4356

Query: 535  ALTSTSKVYTWGKGANGQLGHG 556
             L          +G  GQ GHG
Sbjct: 4357 ELFCPCIPMFDLEGRLGQTGHG 4378



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 33/354 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++  +L V  I C  +  ++++  G ++S             ++    P LI +LS
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS----------QNYKSTTLAPMLIHVLS 482

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV---SGNLD 349
              +  +A      H  A++ +G++++WG G  + G LGHG       P+ +   +G   
Sbjct: 483 SRKIVKLAAHPDGQHYLALSSNGEVFSWGCG--DGGRLGHGDTTYLEEPKMIGTFNGKQA 540

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +++CG  ++A +T+ G L+T+G G++G LGHG     + P  V   +GL+   V+
Sbjct: 541 GKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVA 600

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ V  L D 
Sbjct: 601 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL 648

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +I +V CG   SVALT  G VYT G     +LG    + +   ++   +    V +VA G
Sbjct: 649 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVG 708

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCG 581
           + H  ALT   +V +W  G+N +L H D    N+  P  +  L  K +  + CG
Sbjct: 709 STHCLALTDDGEVLSW--GSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 760



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 25/292 (8%)

Query: 212 NGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWG 269
            GFL        YS + ++  L P  +    +  +  +A     +H + ++  GE+FSWG
Sbjct: 452 KGFLILSSSGAVYSQNYKSTTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWG 511

Query: 270 EESGGRLGHGREADVSHPQLIEIL----SGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
              GGRLGHG    +  P++I       +G +V  VACG  ++ A+T  G+LYTWG G Y
Sbjct: 512 CGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNY 571

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGAL 383
             G LGHGS      P  V+    G+ +  ++CG     T  VT  G ++++GDG +G L
Sbjct: 572 --GRLGHGSSEDQTTPMVVTA-FKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           G G       P+ VE L+ L   +V CG   + A+              T  G+++TWG 
Sbjct: 629 GRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL--------------TKDGQVYTWGK 674

Query: 444 GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           GD  RLGHG  E   +P+ +  L  + +  VA G    +ALT  G V + GS
Sbjct: 675 GDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGS 726



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 162/325 (49%), Gaps = 38/325 (11%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-D 322
           E+ +WG      LG    A+V+ P   + LS + V  + C E     ++ SG +Y+    
Sbjct: 415 EVIAWG-----LLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK 469

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T  + +L H   +S     K++ + DG H  Y++        ++S G +F++G G  G 
Sbjct: 470 STTLAPMLIH--VLSSRKIVKLAAHPDGQH--YLA--------LSSNGEVFSWGCGDGGR 517

Query: 383 LGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           LGHGD      P+ + T  G +  +    V+CG  ++AA+              T+ G+L
Sbjct: 518 LGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAI--------------TADGEL 563

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSA 496
           +TWG G+ GRLGHG  E +  P  V       +  VACG     ++A+T +G V++ G  
Sbjct: 564 YTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG 623

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VYTWGKG N +LGHG
Sbjct: 624 DYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 683

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++   P L+D L+ K+V  V  G
Sbjct: 684 TDEHVRYPKLLDSLQGKKVVDVAVG 708



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R + +  + +  +H +      + G++F WG+G   G LG G+        
Sbjct: 4079 DRPRVIESLRGVEVVDIAAGGAHSAC---ITASGELFTWGKG-RYGRLGHGDSE------ 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 ---DQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCK 4185

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4186 IPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4243

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4244 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4302

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P   T+ GKL
Sbjct: 4303 NRVACGSAHTLAW------STSKP---TNAGKL 4326



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 47/323 (14%)

Query: 179 ISLSSVVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           +S   +V  ++H  G  +    S G+VF WG G   G LG G+          T    PK
Sbjct: 481 LSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCG-DGGRLGHGD---------TTYLEEPK 530

Query: 237 AVES----TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            + +         V ++ACG+ ++  +T  GE+++WG  + GRLGHG   D + P ++  
Sbjct: 531 MIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTA 590

Query: 293 LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             G+ V  VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ V   L  
Sbjct: 591 FKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQD 647

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + +  + CG   +  +T  G ++T+G G    LGHG       P+ +++L+G +   V+ 
Sbjct: 648 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAV 707

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVA 464
           G  H  A+              T  G++ +WG  DK  L H D      K+P+  P    
Sbjct: 708 GSTHCLAL--------------TDDGEVLSWGSNDK--LQHFDTLFSNKKQPKALPG--- 748

Query: 465 PLIDENICQVACGHDLSVALTTS 487
            L  ++I  ++CG   S A ++S
Sbjct: 749 -LNSKHIVGISCGPGQSFAWSSS 770



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 433 TSCGKLFTWGDGDKGRLGHGD----KEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
           +S G++F+WG GD GRLGHGD    +EP++          +++  VACG   S A+T  G
Sbjct: 502 SSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADG 561

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWG 546
            +YT G   YG+LG   ++      V        V +VACG+      A+T   +V++WG
Sbjct: 562 ELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWG 621

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G  G+LG G  D   +P LV+ L+D  + +V CG  F+  +
Sbjct: 622 DGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 663



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 15/190 (7%)

Query: 415  TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDEN 470
            TAA  +A    S   S +T   K+F WG  DK +LG G K  ++    F E ++ L   N
Sbjct: 2935 TAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---N 2990

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC- 528
            + QVA G     A+T  G +Y  G A  G+LG+ ++ G +P  R    ++   +++VA  
Sbjct: 2991 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVH 3050

Query: 529  -GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
             G  H  ALT   KV++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A 
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3110

Query: 588  IC----LHKW 593
            I     L+ W
Sbjct: 3111 ITSSGELYSW 3120



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV      +    L  + L      L+    VT+ G 
Sbjct: 3950 SGTIYGWGHN--HRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLF---AVTADGK 4004

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4005 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIRKVAVNSGGKHCLA 4052

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  +A G   S  +T SG ++
Sbjct: 4053 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 4112

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  VD  +    V +VACG+       LT    V++WG G
Sbjct: 4113 TWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4171

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4172 DYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVAL 4211



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3950 SGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAV---------- 3999

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4000 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 4055

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T++ +++TWG
Sbjct: 4056 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4115

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LVD L+  +V  V CG      +CL
Sbjct: 4116 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4159


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 1817

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  +  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 1818 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 1877

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G 
Sbjct: 1878 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGL 1934

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 1935 GEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGS-RDAQTLALTDE-----------GM 1982

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T T +V+ WG   +GQ 
Sbjct: 2043 YFRLGHGTDVHVRK---PQMVEGLRGKKIVH-VAVGALHCLAVTETGQVFAWGDNDHGQQ 2098

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2099 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVTT-PSVHEPVLFQT 2151

Query: 614  KR 615
             R
Sbjct: 2152 AR 2153



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 2763 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPTEALATLRPVQLIGGEQTLFAVT 2812

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G+LY
Sbjct: 2813 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 2872

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G+ +  I+ G  H+A +T++G L+T+G G
Sbjct: 2873 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELYTWGKG 2929

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   V+CG      + +  D              +
Sbjct: 2930 RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDD------------MV 2977

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 2978 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3037

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3038 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3096

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 3097 TNAIQRPRLVAALQGKKINRVACG 3120



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 165/342 (48%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+    + VH+   G RHA+ +T
Sbjct: 1820 GKVYACGEA-TNGRLGLGLSSGTIPIPRQISALSNYVVKK---VAVHS---GGRHAMALT 1872

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LY+W
Sbjct: 1873 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 1932

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 1933 GLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 1989

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2035

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G V+  G   +
Sbjct: 2036 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDH 2095

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 2096 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2136



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES 2898

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L GV V  +A G  H+  +T SG+LYTWG G Y  G LGHG       P+ V   L G  
Sbjct: 2899 LRGVEVVDIAAGGAHSACITASGELYTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGHR 2955

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 2956 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3015

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3016 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3061

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 3062 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 3121

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 3122 AHTLAW-STSKPTNAGK 3137



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+++ WGE   +G LG G          ++    P+ +ES   +
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGV 2902

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  GE+++WG+   GRLGHG   D   P+L+E L G  V  VAC 
Sbjct: 2903 EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACG 2962

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 2963 SGDAQTLCLTDDDMVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQF 3019

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 3020 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 3075

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 3076 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125

Query: 483  ALTTS 487
            A +TS
Sbjct: 3126 AWSTS 3130



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGK 1821

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G +P  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 1822 VYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1881

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 1932



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 2762 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV---------- 2811

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 2812 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 2867

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G +Y+ G A  G+LG          RV   +    V ++A G  H A +T++ ++YTWG
Sbjct: 2868 EGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWG 2927

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  V CG      +CL
Sbjct: 2928 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 2971


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 2644 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 2690

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2750

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 2751 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2807

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 2808 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 2854

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 2855 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 2914

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 2915 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2972

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 2973 HTNHVREPTLVTVLQGKNIRQISAG 2997



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 2733 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2792

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 2793 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 2849

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 2850 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 2900

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 2901 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 2955

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 2956 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 3006



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 2644 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 2698

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 2699 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2755

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 2756 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 2801

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 2802 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 2861

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 2862 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 2920

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 2921 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 2949



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 2747 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 2796

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 2797 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2856

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 2857 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 2913

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 2914 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 2959

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 2960 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 3019

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 3020 LQLGLPDA 3027



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 2644 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 2697

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 2744

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 2745 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2804

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G  
Sbjct: 2805 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 2862

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 2863 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2900


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 3996 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 4042

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4267 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4325 HTNHVREPTLVTVLQGKNIRQISAG 4349



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4252

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4253 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4307

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3996 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4050

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4051 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4153

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4214 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4272

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4273 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4099 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4209 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4311

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4371

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4372 LQLGLPDA 4379



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3996 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4049

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4095

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4096 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 197/385 (51%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 1609 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 1655

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 1656 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1715

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 1716 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1772

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 1773 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 1819

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 1820 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 1879

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 1880 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 1937

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 1938 HTNHVREPTLVTVLQGKNVRQISAG 1962



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 1698 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1757

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 1758 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 1814

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 1815 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 1865

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 1866 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 1920

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 1921 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 1971



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 1609 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 1663

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 1664 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1720

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 1721 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 1766

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 1767 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 1826

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 1827 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 1885

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 1886 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 1914



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 1712 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 1761

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 1762 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1821

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 1822 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 1878

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 1879 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 1924

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 1925 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 1984

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 1985 LQLGLPDA 1992



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 24/277 (8%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 1609 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 1662

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 1709

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 1710 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 1769

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTWGKGANG 551
            G+  YG+LG+   ++  +P RV   +    + +VACG  H  A+++  S V+ +G G  G
Sbjct: 1770 GNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 1828

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 1829 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 1865


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 4007 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 4053

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4114 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4217

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4218 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4277

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4278 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4336 HTNHVREPTLVTVLQGKNIRQISAG 4360



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4156 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4212

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4213 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4263

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4264 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4318

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4319 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4369



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 4007 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4061

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4062 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4164

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4165 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4224

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4225 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4283

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4284 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4110 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4159

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4160 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4219

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4220 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4276

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4277 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4322

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4323 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4382

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4383 LQLGLPDA 4390



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 4007 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4060

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4106

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4107 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4166

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4167 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4224

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4225 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 3996 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 4042

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4267 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4325 HTNHVREPTLVTVLQGKNIRQISAG 4349



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4252

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4253 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4307

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3996 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4050

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4051 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4153

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4214 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4272

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4273 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4099 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4209 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4311

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4371

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4372 LQLGLPDA 4379



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3996 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4049

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4095

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4096 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 3996 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 4042

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4267 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4325 HTNHVREPTLVTVLQGKNIRQISAG 4349



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4252

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4253 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4307

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3996 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4050

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4051 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4153

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4214 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4272

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4273 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4099 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4209 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4311

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4371

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4372 LQLGLPDA 4379



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3996 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4049

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4095

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4096 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 3996 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 4042

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4206

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4207 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 4267 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4325 HTNHVREPTLVTVLQGKNIRQISAG 4349



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4252

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4253 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 4307

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3996 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4050

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4051 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4153

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4214 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4272

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4273 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 28/300 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4099 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4208

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4209 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 4311

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4371

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4372 LQLGLP 4377



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3996 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4049

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4095

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4096 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3965 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4011

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4012 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4071

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4072 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4175

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4176 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4235

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4236 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4293

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4294 HTNHVREPTLVTVLQGKNIRQISAG 4318



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4054 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4113

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4114 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4170

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4171 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4221

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4222 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASN 4276

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 4277 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4327



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3965 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4019

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4020 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4076

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4077 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4122

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4123 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4182

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4183 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4241

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4242 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 4270



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4068 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4117

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4118 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4177

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4178 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4234

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4235 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL--------------ASNGDVY 4280

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4281 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4340

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 4341 LQLGLPDA 4348



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3965 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4018

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4064

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4065 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4124

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4125 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4182

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4183 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4221



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSV----V 4207

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4208 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4268 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4326 HTNHVREPTLVTGLQGKNVRQISAG 4350



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4146 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 369  AGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G  ++ FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4203 DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4253

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4254 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4308

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4309 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4359



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV-YTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G V +  G   
Sbjct: 4155 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4214

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4215 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4274 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4302



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD-LYT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G  ++ 
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWA 4209

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4210 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4266

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4267 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4312

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4372

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4373 LQLGLP 4378



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4096

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4097 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGD 4214

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4215 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2297

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2298 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2358 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2414

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2415 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2462

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2522

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 2523 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 2578

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2579 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 2631

Query: 614  KR 615
             R
Sbjct: 2632 AR 2633



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3241 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3290

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3291 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3350

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3351 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3407

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3408 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 3455

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3456 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3515

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3516 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3574

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 3575 TNAIQRPRLVAALQGKKVNRVACG 3598



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2300 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 2352

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2353 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2412

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2413 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2469

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2470 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2515

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 2516 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2575

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 2576 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2616



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3376

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3377 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3433

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3434 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3493

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3494 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3539

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3540 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 3599

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 3600 AHTLAW-STSKPASAGK 3615



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3369 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3417

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3418 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3475

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3476 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3533

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3534 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3592

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 3593 NRVACGSAHTLA------WSTSKPA---SAGKL 3616



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 15/175 (8%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVACGHDLSVALT 485
            S +T   K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA G     A+T
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVAGGSKSLFAVT 2297

Query: 486  TSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKV 542
              G VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV
Sbjct: 2298 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357

Query: 543  YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            ++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 2358 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2412



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3240 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3294

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3295 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3342

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3343 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3402

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 3403 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 3461

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3462 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3501



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3240 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3289

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3290 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3345

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3346 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3405

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3406 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3449


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2964 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3011

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3012 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3071

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3072 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGL 3128

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3129 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3176

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3236

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3237 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3292

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3293 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3345

Query: 614  KR 615
             R
Sbjct: 3346 AR 3347



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3956 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4005

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G++Y
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4065

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHGS+  C  PR V  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4066 SWGEA--EDGKLGHGSRSPCDRPRVVE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDT------------V 4170

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4171 WSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4230

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4231 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4289

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4290 TNAIQRPRLVAALQGKKVNRVACG 4313



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3014 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3066

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3067 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTW 3126

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3127 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3183

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3184 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3229

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3230 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3289

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3290 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3330



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 175/354 (49%), Gaps = 33/354 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++++WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQG 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            + +V CG   SVALT  G VY+ G     +LG    + +   R+   +    V +VA G
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAG 718

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           + H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 719 STHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P+++E 
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES 4091

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4092 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVE-VLQGHR 4148

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++E+L GL   +V C
Sbjct: 4149 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVEC 4208

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4209 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4254

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4255 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4314

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4315 AHTLAW-STSKPSSAGK 4330



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G +F++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVFSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLR----TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +       ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L  K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4084 DRPRVVESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4132

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE      V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4133 E--DQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4190

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4191 VPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4248

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4249 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4307

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S PS   S GKL
Sbjct: 4308 NRVACGSAHTLA------WSTSKPS---SAGKL 4331



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 146/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+VF WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQGGK----- 552

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 553 ------HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLEVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       PR +E L G +   V+ G  H  
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY  G A
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3022

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3023 TNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3082

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ L+ K+++ + CG + +A +     L+ W
Sbjct: 3083 GHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTW 3126



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 126/279 (45%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3955 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4009

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4010 LYATGYGAGGRLGIGGTESVSAPTLLESIQ------------HVFIRKVAVNSGGKHCLA 4057

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG + P   P  V  L    +  VA G   S  +T +G +Y
Sbjct: 4058 LSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            T G   YG+LG   ++  +  ++   +    V +VACG+       LT    V++WG G 
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 19/228 (8%)

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            S GL  +A V +   +F +G      LG        +P   ETL  L   +V+ G     
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3008

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVA 475
            AV V               GK++  G+   GRLG G     +  P  +  L    + +VA
Sbjct: 3009 AVTVE--------------GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVA 3054

Query: 476  C--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
               G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H 
Sbjct: 3055 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHS 3114

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            AALTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3115 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3162



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4004

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4005 ----TADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS 4060

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4061 EGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4120

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4121 KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCL 4164


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2954 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3001

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3002 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3061

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3062 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3118

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3119 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3166

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3226

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3227 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3282

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3283 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3335

Query: 614  KR 615
             R
Sbjct: 3336 AR 3337



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 155/301 (51%), Gaps = 19/301 (6%)

Query: 284  VSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
            VS P L+E +  V ++ VA   G  H  A++  G++Y+WG+     G LGHG++  C  P
Sbjct: 3967 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA--EDGKLGHGNRSPCDRP 4024

Query: 342  RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
            R +  +L GI +  ++ G  H+A VT+AG L+T+G G +G LGH D      P+ VE L+
Sbjct: 4025 RVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4083

Query: 402  GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
            G R   ++CG      + +  D +            +++WGDGD G+LG G  +    P 
Sbjct: 4084 GHRVVDIACGSGDAQTLCLTDDDT------------VWSWGDGDYGKLGRGGSDGCKVPM 4131

Query: 462  CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAE 520
             +  L    + +V CG   SVALT SG VYT G   Y +LG    D +  P +V G   +
Sbjct: 4132 KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4191

Query: 521  SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
              +  +A G+ H    T   +VYTWG    GQLG G  +    P LV  L+ K+V RV C
Sbjct: 4192 KVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4250

Query: 581  G 581
            G
Sbjct: 4251 G 4251



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3004 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3056

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3057 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3116

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3117 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3173

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3174 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3219

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3220 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3279

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3280 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3320



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4086

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4146

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4147 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4192

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4193 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4252

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4253 AHTLAW-STSKPASAGK 4268



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4022 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4070

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4071 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4128

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4129 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4186

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4187 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4245

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4246 NRVACGSAHTLAW------STSKPA---SAGKL 4269



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3005

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3006 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3065

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3066 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3116



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 4/180 (2%)

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
            + H     VA +S        +S G++++WG+ + G+LGHG++ P   P  +  L    +
Sbjct: 3976 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4035

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA 530
              VA G   S  +T +G +YT G   YG+LG     D L P  V+       V+ +ACG+
Sbjct: 4036 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGS 4094

Query: 531  --YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                   LT    V++WG G  G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4095 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4154



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 58/109 (53%)

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            +AL++ G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   
Sbjct: 3994 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4053

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +YTWGKG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4054 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4102


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3961 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4007

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4067

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4068 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4171

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4172 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4231

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4232 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4289

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4290 HTNHVREPTLVTGLQGKNVRQISAG 4314



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4050 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4109

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4110 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4166

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4167 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4217

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4218 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4272

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4273 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4323



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3961 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4015

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4016 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4072

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4073 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4118

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4119 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4178

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4179 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4237

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4238 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4266



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4064 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4113

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4114 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4173

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4174 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4230

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4231 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4276

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4277 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4336

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4337 LQLGLP--DTLPP 4347



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3961 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4014

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4060

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4061 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4120

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4121 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4178

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4179 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4217



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3983 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4029

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4193

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4194 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4253

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4254 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4311

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4312 HTNHVREPTLVTGLQGKNVRQISAG 4336



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4132 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4188

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4189 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4239

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4240 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4294

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4295 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4345



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3983 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4037

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4038 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4140

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4141 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4200

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4201 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4259

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4260 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4288



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4086 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4135

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4136 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4195

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4196 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4252

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4253 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4298

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4299 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4358

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4359 LQLGLP--DTLPP 4369



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3983 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4036

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4082

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4083 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4142

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4200

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4201 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4239



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3010

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3011 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3070

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3071 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3127

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3128 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3175

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3235

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3236 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3291

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3292 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3344

Query: 614  KR 615
             R
Sbjct: 3345 AR 3346



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3956 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4005

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVY 4065

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR V  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4066 SWGEA--EDGKLGHGNRSPCDRPRVVE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4170

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4171 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4230

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4231 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4289

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4290 TNAIQRPRLVAALQGKKVNRVACG 4313



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3013 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3065

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3066 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3125

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3126 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3182

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3183 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3228

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3229 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3288

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3289 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3329



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E   +L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDALAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG      IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P+++E 
Sbjct: 4032 PTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 4091

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4092 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4148

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4149 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4208

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4209 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4254

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4255 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4314

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4315 AHTLAW-STSKPTSTGK 4330



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++RSG +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + I ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDALA---------PQLVQGLASRNIIKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E  + P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4084 DRPRVVESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4132

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4133 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4190

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4191 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4248

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4249 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4307

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P   TS GKL
Sbjct: 4308 NRVACGSAHTLA------WSTSKP---TSTGKL 4331



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 37/307 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D   P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T   ++ +WG  D+ +     +  +  P  +  L  ++I  +AC
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769

Query: 477 GHDLSVA 483
           G   S A
Sbjct: 770 GPAQSFA 776



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3014

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3015 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3074

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3075 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3125



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3955 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 4009

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4010 LYATGYGAGGRLGIGGTESVSTPTLLESVQ------------HVFIKKVAVNSGGKHCLA 4057

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  V  L    +  VA G   S  +T +G +Y
Sbjct: 4058 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4176

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4177 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4216



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 4004

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4005 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSS 4060

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4061 EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4120

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4121 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3991 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4037

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4098 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4201

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4202 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4261

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4262 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4320 HTNHVREPTLVTGLQGKNVRQISAG 4344



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4080 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4139

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4140 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4196

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4197 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4247

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4248 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4302

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4303 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4353



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3991 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4045

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4046 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4148

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4149 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4208

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4209 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4267

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4268 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4296



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4094 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4143

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4144 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4203

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4204 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4260

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4261 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4306

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4307 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4366

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4367 LQLGLP--DTLPP 4377



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3991 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4044

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4090

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4091 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4150

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4151 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4208

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4209 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3991 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4037

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4098 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV V          GS     +
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSV---------DGSM----V 4201

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4202 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4261

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4262 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4320 HTNHVREPTLVTGLQGKNVRQISAG 4344



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4080 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4139

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V+ 
Sbjct: 4140 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV 4196

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4197 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4247

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4248 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4302

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4303 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4353



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3991 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4045

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4046 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4148

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4149 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4208

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4209 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4267

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4268 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4296



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4094 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4143

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4144 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4203

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4204 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4260

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4261 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4306

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4307 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4366

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4367 LQLGLP 4372



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3991 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4044

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4090

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4091 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4150

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALT-STSKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A++   S V+ +G G 
Sbjct: 4151 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4208

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4209 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3990 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4036

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4097 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4200

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4201 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4260

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4261 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4318

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4319 HTNHVREPTLVTGLQGKNVRQISAG 4343



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4079 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4138

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4139 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4195

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4196 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4246

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4247 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4301

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4302 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4352



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3990 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4044

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4045 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4147

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4148 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4207

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4208 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4266

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4267 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4295



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4093 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4142

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4143 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4202

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4203 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4259

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4260 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4305

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4306 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4365

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4366 LQLGLP--DTLPP 4376



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3990 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4043

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4089

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4090 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4149

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4150 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4207

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4208 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4246



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/386 (36%), Positives = 198/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4207

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4208 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +A   +E+VA GA H  AL S   VY WG  + GQLG 
Sbjct: 4268 --IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTLV  L+ K V+++  G
Sbjct: 4325 GHTNHVREPTLVTGLQGKNVRQISAG 4350



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4146 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4202

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4203 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4253

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  VA G + ++AL ++
Sbjct: 4254 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASN 4308

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4309 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4359



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4154

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4155 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4214

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4215 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ V  G   T
Sbjct: 4274 RARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4209

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4210 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4266

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    V+ G  HT A+               S G ++
Sbjct: 4267 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL--------------ASNGDVY 4312

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4372

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4373 LQLGLP 4378



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4096

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4097 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4214

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4215 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3935 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 3981

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4041

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4042 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV V          GS     +
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSV---------DGSM----V 4145

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4146 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4205

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4206 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4263

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4264 HTNHVREPTLVTGLQGKNVRQISAG 4288



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4024 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4083

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V+ 
Sbjct: 4084 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV 4140

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4141 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4191

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4192 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4246

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4247 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4297



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3935 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 3989

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 3990 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4046

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4047 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4092

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4093 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4152

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4153 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4211

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4212 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4240



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4038 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4087

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4088 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4147

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4148 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4204

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4205 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4250

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4251 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4310

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4311 LQLGLP 4316



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3935 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 3988

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4034

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4035 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4094

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALT-STSKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A++   S V+ +G G 
Sbjct: 4095 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4152

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4153 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4191



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4360



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4374 LQLGLP--DTLPP 4384



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2948

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2949 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 3008

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3009 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3065

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3066 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3113

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3173

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3174 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3229

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3230 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3282

Query: 614  KR 615
             R
Sbjct: 3283 AR 3284



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3892 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3941

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3942 ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4001

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHGS+  C  PR +  +L G+ +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4002 SWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGVEVVDVAAGGAHSACVTAAGDLYTWGKG 4058

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4059 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4106

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4107 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4166

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4167 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4225

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4226 TNAIQRPRLVAALQGKKVNRVACG 4249



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2951 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYMVKKVA---VHS---GGRHATALT 3003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3004 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3063

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3064 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3121 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3167 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3226

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3227 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3267



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 4027

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L GV V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4028 LRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4084

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4085 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4144

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4145 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4190

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4191 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4250

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4251 AHTLAW-STSKPTSAGK 4266



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 170/355 (47%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYT----------QAYNSDTLAPQLVQGLA 422

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 423 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 480

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++  L HG      I   +  L   +    S
Sbjct: 481 GKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKS 540

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG+     +    +            G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 541 CGIRFAQTLAFYEN------------GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 588

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 589 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 647

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 648 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 25/280 (8%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           Y+ +  +D L P+ V+   + ++  IA      H + +   GE++SWG   GGRLGHG  
Sbjct: 404 YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 463

Query: 282 ADVSHPQLIEILS----GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
             +  P++I   S    G +V  +ACG  ++ A+T  G+LYTWG G Y    L HG    
Sbjct: 464 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXR--LDHGRSAM 521

Query: 338 CWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
             I   +SG LD     Y SCG+    T      G ++++GDG +G LG G       P+
Sbjct: 522 NEILIMISG-LDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPK 580

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
            +E L+ L   +V CG   + A+              T  G++++WG GD  RLGHG +E
Sbjct: 581 LIEKLQDLDVVKVRCGSQFSIAL--------------TKDGQVYSWGKGDNQRLGHGTEE 626

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
              +P+ +  L  + +  VA G    +ALT    V++ GS
Sbjct: 627 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 666



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R + +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4020 DRPRVIESLRGVEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4068

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4069 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4126

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4127 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4184

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4185 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4243

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P   TS GKL
Sbjct: 4244 NRVACGSAHTLA------WSTSKP---TSAGKL 4267



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 162/345 (46%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 355 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYT---Q 406

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 407 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 456

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 457 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 502

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL--SVALTTSGHVYTMGS 495
           L+TWG G+  RL HG          ++ L  +     +CG     ++A   +G V++ G 
Sbjct: 503 LYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGD 562

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 563 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 622

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 623 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 667



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY  G A
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 2959

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 2960 TNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3019

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3020 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3063



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3891 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3945

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3946 LYATGYGAGGRLGIGGTESVSSPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3993

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG + P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3994 LSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLY 4053

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4054 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4112

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4113 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4152



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 19/228 (8%)

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            + GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     
Sbjct: 2888 AAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2945

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVA 475
            AV V               GK++  G+   GRLG G     +  P  +  L    + +VA
Sbjct: 2946 AVTVE--------------GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVA 2991

Query: 476  C--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
               G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H 
Sbjct: 2992 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3051

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            AALTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3052 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3099



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 17/165 (10%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           F   G V+ WG+G   G LG G    G    +      PK +E    LDV  + CG++ +
Sbjct: 551 FYENGQVWSWGDG-DYGKLGRG----GSDGCKT-----PKLIEKLQDLDVVKVRCGSQFS 600

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           + +TK G+++SWG+    RLGHG E  V +P+L+E L G  V  VA G  H  A+T   +
Sbjct: 601 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 660

Query: 317 LYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           +++WG  D   +   L    +V+   P  + G LD  H+  I+CG
Sbjct: 661 VHSWGSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACG 700



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3891 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3940

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3941 ----TADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS 3996

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3997 EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWG 4056

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4057 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4100


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV V          GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSV---------DGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V+ 
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4360



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4374 LQLGLP 4379



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALT-STSKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A++   S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 2451 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 2497

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2557

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 2558 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2614

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 2615 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 2661

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 2662 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 2721

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 2722 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 2779

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 2780 HTNHVREPTLVTGLQGKNVRQISAG 2804



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 2540 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2599

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 2600 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 2656

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 2657 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 2707

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 2708 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 2762

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 2763 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 2813



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 2451 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 2505

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 2506 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2562

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 2563 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 2608

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 2609 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 2668

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 2669 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 2727

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 2728 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 2756



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 2554 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 2603

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 2604 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 2663

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 2664 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 2720

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 2721 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 2766

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 2767 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 2826

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 2827 LQLGLP--DTLPP 2837



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 2451 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 2504

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 2551

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 2552 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2611

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G  
Sbjct: 2612 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 2669

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 2670 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 2707


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3983 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4032

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4033 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4092

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4093 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4149

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4197

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4198 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4257

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4258 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4316

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4317 TNAIQRPRLVAALQGKKVNRVACG 4340



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4118

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4119 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4175

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4176 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4235

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4236 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4281

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4282 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4341

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4342 AHTLAW-STSKPASAGK 4357



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4111 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4159

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4160 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4217

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4218 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4275

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4276 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4334

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4335 NRVACGSAHTLAW------STSKPA---SAGKL 4358



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3982 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4036

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4037 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4084

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4085 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4144

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4145 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4203

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4204 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4243



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4031

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4032 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4087

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4088 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4147

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4148 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4191


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4360



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4374 LQLGLP 4379



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4360



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4374 LQLGLP 4379



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2966 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3013

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3014 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3073

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3074 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3130

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3131 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3178

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3238

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3239 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3294

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3295 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3347

Query: 614  KR 615
             R
Sbjct: 3348 AR 3349



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3957 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4067 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4123

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4124 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4171

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4232 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4291 TNAIQRPRLVAALQGKKVNRVACG 4314



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3016 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3068

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3069 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3128

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3129 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3185

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3186 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3231

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3232 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3291

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3292 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3332



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 437

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 438 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 495

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 556 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 662

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 663 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 715



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4093 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4149

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4150 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4209

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4210 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4315

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4316 AHTLAW-STSKPASAGK 4331



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 421

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 422 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 471

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 517

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 518 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 577

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 578 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 637

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 638 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4085 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4133

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4134 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4192 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4249

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4250 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4308

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4309 NRVACGSAHTLA------WSTSKPA---SAGKL 4332



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 444 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 494

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 495 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 551

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 552 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 608

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 609 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 668

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 669 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 712

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 713 ACGPAQSFA 721



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3017

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3018 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3077

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3078 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3128



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4010

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4058

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4059 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4118

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4119 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4177

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4005

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4006 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4061

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4121

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4122 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4165


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3012

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3013 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+++G 
Sbjct: 3073 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGL 3129

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  +  VA GA H  A+T T +VY WG   +GQ 
Sbjct: 3238 YFRLGHGTDVHVRK---PQVVEGLRGKKIIH-VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W +++D +   S H P  F+ 
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----SW-TTMDVAT-PSVHEPVLFQT 3346

Query: 614  KR 615
             R
Sbjct: 3347 AR 3348



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 229/488 (46%), Gaps = 70/488 (14%)

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTN-----AFPDNS-- 167
           QGT  PL       L + F +II   E  NT      +S+  SP  N       P ++  
Sbjct: 332 QGTSAPL-----LPLLQRFQNIICNKEMNNTEEELQMLSYPLSPNENFLRYLILPQDNEL 386

Query: 168 --NDRSSA----AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR 221
             + R +A    A   R++   +    S  ++H+   SL +V  WG              
Sbjct: 387 AIDLRQTAVVIMAHLDRLATPCMPPHCSSPTSHKG--SLQEVIAWG-------------L 431

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           +G+ +        P   E   +L V  IAC  +  +++++ G +++              
Sbjct: 432 IGWKYYANVSG--PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYN 479

Query: 282 ADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           +D+  PQL++ L+  N+  +A     +H  A+  +G++++WG G  + G LGHG  V   
Sbjct: 480 SDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLE 537

Query: 340 IPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V  L+GL+   VSCG      + V            T  G++++WGDGD G+LG G  + 
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDG 645

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVD 515
              P+ +  L D +I +V+CG   SVALT  G VY+ G     +LG    + +  P  ++
Sbjct: 646 CKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDK 573
           G   E  ++ VA G+ H  ALT  S+VY+W  G+N Q  H D  +  +  PT +  L  K
Sbjct: 706 GLQGEKVIDVVA-GSTHCLALTEDSEVYSW--GSNDQCQHFDTLRITKPDPTALPGLDSK 762

Query: 574 QVKRVVCG 581
            +  + CG
Sbjct: 763 HIVGIACG 770



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3957 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  I+ G  H+A +T+AG L+T+G G
Sbjct: 4067 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 4123

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 4171

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4232 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4291 TNAIQRPRLVAALQGKKINRVACG 4314



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 164/341 (48%), Gaps = 28/341 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSNYVVKKVA---VHS---GGRHAMALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LY+W
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3290

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            GQ G         PT V G +    +  VACG+ H  + T+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVSWTT 3330



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDLYTWG G Y  G LGHG       P+ V   L G  
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L G+   +V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVEC 4209

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4210 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4315

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4316 AHTLAW-STSKPANAGK 4331



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  + +  +H +      + GD++ WG+G   G LG G+        
Sbjct: 4085 DRPRVIESLRGIEVVDIAAGGAHSAC---ITAAGDLYTWGKG-RYGRLGHGDSE------ 4134

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4135 ---DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+GV V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4192 VPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4249

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4250 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4308

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4309 NRVACGSAHTLA 4320



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 25/301 (8%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+VF WG G   G LG G+  V     +   AL  K        
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCG-DGGRLGHGD-TVPLEEPKMISALSGKQA----GK 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +SCG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V  G  H  A+    
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T   ++++WG  D+ +     +  +  P  +  L  ++I  +ACG   S 
Sbjct: 726 ----------TEDSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSF 775

Query: 483 A 483
           A
Sbjct: 776 A 776



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 8/160 (5%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVALTTSGHVY 491
           G++F+WG GD GRLGHGD  P   P+ ++ L      +++  +ACG   S A+T  G +Y
Sbjct: 515 GEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELY 574

Query: 492 TMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
           T G   YG+LG   + D  +P  V G +    V +V+CG+      A+T   +V++WG G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDG 633

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D   +P L++ L+D  + +V CG  F+  +
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVAL 673



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY  G A
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3023

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 3024 TNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3084 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3127



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 364  AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            +V T    +F +G      LG        +P   ETL  L   +V+ G     AV V   
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE-- 3014

Query: 424  SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC--GHDL 480
                        GK++  G+   GRLG G     +  P  +  L +  + +VA   G   
Sbjct: 3015 ------------GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 481  SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            ++ALT  G V++ G    G+LG          R+   +    + ++ACG+ H AA+TS+ 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            ++Y+WG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3123 ELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4005

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4006 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4061

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T+   +YTWG
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWG 4121

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2956 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3003

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3004 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3063

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3064 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3120

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3121 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3168

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3228

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3229 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3284

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3285 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3337

Query: 614  KR 615
             R
Sbjct: 3338 AR 3339



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3947 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3996

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3997 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4056

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4057 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4113

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4114 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4161

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4162 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4221

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4222 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4280

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4281 TNAIQRPRLVAALQGKKVNRVACG 4304



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3006 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3058

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3059 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3118

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3119 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3175

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3176 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3221

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3222 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3281

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3282 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3322



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4082

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4083 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4139

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4140 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4199

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4200 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4245

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4246 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4305

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4306 AHTLAW-STSKPASAGK 4321



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4075 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4123

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4124 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4181

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4182 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4239

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4240 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4298

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4299 NRVACGSAHTLA------WSTSKPA---SAGKL 4322



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3007

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3008 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3067

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3068 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3118



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3946 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4000

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4001 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4048

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4049 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4108

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4109 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4167

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4168 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4207



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3946 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3995

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3996 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4051

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4052 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4111

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4112 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4155


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2233

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2234 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2293

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2294 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2350

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2351 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2398

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2458

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 2459 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 2514

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2515 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 2567

Query: 614  KR 615
             R
Sbjct: 2568 AR 2569



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 30/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3179 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3228

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3229 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3288

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3289 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3345

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ V+ L+G R   V+CG      + +  D +            +
Sbjct: 3346 RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDT------------V 3393

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3394 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3453

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T     YTWG    GQLG G 
Sbjct: 3454 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGT 3511

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 3512 TNAIQRPRLVAALQGKKVNRVACG 3535



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2236 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 2288

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2289 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2348

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2349 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2405

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2406 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2451

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 2452 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2511

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 2512 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2552



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 154/317 (48%), Gaps = 23/317 (7%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3255 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3314

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3315 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVDA-LQGHR 3371

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3372 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3431

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3432 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3477

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G  YT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3478 VIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 3536

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 3537 AHTLAW-STSKPASAGK 3552



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 135/273 (49%), Gaps = 29/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3307 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3355

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3356 E--DQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3413

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3414 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3471

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G  +T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3472 G-LQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3529

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 3530 NRVACGSAHTLAW------STSKPA---SAGKL 3553



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 15/180 (8%)

Query: 425  SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVACGHDL 480
            ++S  S +T   K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA G   
Sbjct: 2173 ATSLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVAGGSKS 2228

Query: 481  SVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALT 537
              A+T  G VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT
Sbjct: 2229 LFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT 2288

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
               KV++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 2289 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2348



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3178 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 3232

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3233 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3280

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3281 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3340

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  VD       V +VACG+       LT    V++WG G
Sbjct: 3341 TWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDG 3399

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3400 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3439



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3178 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 3227

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3228 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3283

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3284 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3343

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LVD L+  +V  V CG      +CL
Sbjct: 3344 KGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 4001 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4047

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4108 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4211

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4212 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4271

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4272 --IGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4329

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4330 HTNHVREPTLVTGLQGKNVRQISAG 4354



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4150 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4206

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4207 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4257

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4258 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASN 4312

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 4313 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4363



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 4001 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4055

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4056 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4158

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4159 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4218

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4219 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4277

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4278 RARNHNRPQQIPLLAGVIIEDVAVGAEHT 4306



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4104 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4153

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4154 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4213

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4214 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4270

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4271 LIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4316

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4376

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4377 LQLGLP 4382



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 4001 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4054

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4100

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4101 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4160

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4161 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4218

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4219 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4257



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3069 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3125

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3126 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3173

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3234 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3290 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3342

Query: 614  KR 615
             R
Sbjct: 3343 AR 3344



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3952 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4062 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4166

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4227 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACG 4309



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3011 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3063

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3226

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3287 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4144

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4205 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4310

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4311 AHTLAW-STSKPASAGK 4326



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4080 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4128

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4129 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4186

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4244

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4245 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4304 NRVACGSAHTLA------WSTSKPA---SAGKL 4327



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4005

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4053

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4172

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4173 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4000

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4001 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4056

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNIRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    + +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNIRQISAGRCHSAAWTA 4360



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4374 LQLGLP--DTLPP 4384



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2657 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2704

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2705 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2764

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2765 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2821

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2822 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2869

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2929

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 2930 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 2985

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2986 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3038

Query: 614  KR 615
             R
Sbjct: 3039 AR 3040



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3648 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3697

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3698 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3757

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3758 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3814

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 3862

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3863 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3922

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3923 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3981

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 3982 TNAIQRPRLVAALQGKKVNRVACG 4005



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2707 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 2759

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2760 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2819

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2820 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2876

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2877 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2922

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 2923 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2982

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 2983 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3023



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3783

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3784 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3840

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3841 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3900

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3901 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3946

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3947 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4006

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4007 AHTLAW-STSKPASAGK 4022



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 127/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3776 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3824

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3825 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3882

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3883 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3940

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3941 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3999

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4000 NRVACGSAHTLA 4011



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 17/182 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 446

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 447 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 504

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 505 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 564

Query: 410 CG 411
           CG
Sbjct: 565 CG 566



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2708

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 2709 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2768

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 2769 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2819



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3647 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3701

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3702 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3749

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3750 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3809

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 3810 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 3868

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3869 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3908



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 153/398 (38%), Gaps = 116/398 (29%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 379 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 430

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 431 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 480

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 481 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 526

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT----- 492
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG   +  L  + +  T     
Sbjct: 527 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVL 586

Query: 493 -------------MGSAAYGQLGV-----------PVAD--------------------- 507
                        + S  Y QLGV           P  D                     
Sbjct: 587 WRSVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVLTRDVMLREGQIVF 646

Query: 508 -----GLVPTRVDGEIAESFVEEVACG-----------------AYHVAALTSTSKVYTW 545
                G VPT V  +  +  +  + CG                 + H  ALT  S+V++W
Sbjct: 647 EAGRPGCVPTPVSSQ--KQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSW 704

Query: 546 GKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
             G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 705 --GSNDQCQHFDTLRVTKPEPAALPGLDAKHIMGITCG 740



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3696

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3697 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3752

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3753 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3812

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3813 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3856


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 198/367 (53%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D LLP  + +  A  + +IACGA H +  ++ + E
Sbjct: 37  WGRG-EDGQLGHGD---------TDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNE 86

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I  L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 87  LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWG--R 144

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 145 NQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 203

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     IP +V ++   +   V+CG  HT +V              +S G L+T+G  
Sbjct: 204 LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--------------SSLGGLYTYGWS 249

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHG+ E  L P+ +  L D+ I QV+ G   S+ALT++G +Y  G   +GQ+GV 
Sbjct: 250 KYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVG 309

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     +  V+ ++CG  H  A+T    V++WG+G NGQLGHGD  +RNS
Sbjct: 310 DNVDRCSPVQVKFPHDQKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNS 368

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 369 PKIIEAL 375



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 177/342 (51%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H V +     + SWG    G+LGHG   D   P  +  L    ++ +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  +LY+WG G +  G LGHG+     IP+ +   L G+ +  I+CG  H   VT
Sbjct: 78  LAYSESRNELYSWGWGDF--GRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++T +G+    V+ G  H+ A+         
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI--------- 185

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  R  PE V+ +  + +  VACG   ++++++ 
Sbjct: 186 -----TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSL 240

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP ++   +++  + +V+ G  H  ALTST  +Y WG
Sbjct: 241 GGLYTYGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWG 299

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +R SP  V F  D++V ++ CG   T  +
Sbjct: 300 WNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + S+   + H  A+ +  S  +++ WG G           R+G+  S  +D L+P+ + +
Sbjct: 67  IDSIACGADHTLAYSE--SRNELYSWGWGDFG--------RLGHGNS--SDLLIPQPIIA 114

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT +GE+ SWG    G+LG G   D   PQ I+   GV +++
Sbjct: 115 LQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKM 174

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+ A+T +G+LY WG G Y  G LG G +   WIP KVS ++D   +  ++CG 
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRY--GNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGW 231

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S G L+T+G   +G LGHG+   + +P++++ L     ++VS G  H+ A+  
Sbjct: 232 RHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMAL-- 289

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS G L+ WG    G++G GD   R  P  V    D+ + Q++CG   
Sbjct: 290 ------------TSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRH 337

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A+T   +V++ G    GQLG
Sbjct: 338 TIAVTEKENVFSWGRGTNGQLG 359



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D   P  V+      V  I+CG RH + VT++  +FSWG  + G+LGHG   D + P++
Sbjct: 312 VDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKI 371

Query: 290 IEILS 294
           IE LS
Sbjct: 372 IEALS 376


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3955 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4065 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G     V+CG      + +  D +            +
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDT------------V 4169

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4230 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4289 TNAIQRPRLVAALQGKKVNRVACG 4312



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 156/317 (49%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G H
Sbjct: 4091 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHH 4147

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4208 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4313

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4314 AHTLAW-STSKPASAGK 4329



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4131

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4132 E--DQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4189

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4247

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4248 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4306

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4307 NRVACGSAHTLA------WSTSKPA---SAGKL 4330



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4008

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4056

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4116

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V +VACG+       LT    V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDG 4175

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4176 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4003

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4004 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4059

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+   V  V CG      +CL
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4163


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2646

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2647 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 2706

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2707 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2763

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2764 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2811

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2871

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 2872 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 2927

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2928 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 2980

Query: 614  KR 615
             R
Sbjct: 2981 AR 2982



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3590 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3639

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3640 ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3699

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHGS+  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3700 SWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3756

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 3804

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3805 WSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3864

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3865 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3923

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 3924 TNAIQRPRLVAALQGKKVNRVACG 3947



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2649 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSSYMVKKVA---VHS---GGRHATALT 2701

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2702 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2761

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2762 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2818

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2819 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2864

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 2865 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2924

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 2925 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2965



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 192/393 (48%), Gaps = 38/393 (9%)

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYS---FSRQTDALLPKAVESTMALDVHNIACGARHA 256
            GD ++        ++G  +  +G+    +    + + P   E    L V  IAC  +  
Sbjct: 93  FGDCYLKWSLTQAAWIGSLQEVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRF 152

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE--YHTCAVTRS 314
           +++++ G +++              +D   PQL++ L+  N+  +A     +H  A+  +
Sbjct: 153 LILSRSGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 202

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGH 371
           G++Y+WG G  + G LGHG  V    P+ +S   G   G H+ +I+CG  ++A +T+ G 
Sbjct: 203 GEVYSWGCG--DGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGE 260

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+T+G G++G LGHG     +IP  V  L+GL+   V+CG            S  +    
Sbjct: 261 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG------------SGDAQTLA 308

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G++++WGDGD G+LG G  +    P+ +  L D ++ +V CG   S+ALT  G VY
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 368

Query: 492 TMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           + G     +LG    + +  P  ++G   +  ++ VA G+ H  ALT  S+V++W  G+N
Sbjct: 369 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW--GSN 425

Query: 551 GQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
            Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 426 DQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 458



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 3725

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3726 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3782

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3783 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVEC 3842

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3843 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3888

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3889 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 3948

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 3949 AHTLAW-STSKPTSAGK 3964



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++RSG +YT    
Sbjct: 113 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYT---Q 164

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 165 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 214

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 215 RLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 260

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 261 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 320

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 321 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 380

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 381 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3718 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3766

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3767 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3824

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3825 VPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3882

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3883 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3941

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P   TS GKL
Sbjct: 3942 NRVACGSAHTLA------WSTSKP---TSAGKL 3965



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 37/310 (11%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES---- 240
           +++ S G  +    + G+V+ WG G       GG  R+G+  +   +   PKA+ +    
Sbjct: 187 IAAHSDGHHYLALAATGEVYSWGCG------DGG--RLGHGDTVPLEE--PKAISAFSGK 236

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 296

Query: 301 VAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + C
Sbjct: 297 VACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRC 353

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 413

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVAC 476
                         T   ++ +WG  D+ +  H D      PE  A P +D ++I  +AC
Sbjct: 414 --------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGIAC 457

Query: 477 GHDLSVALTT 486
           G   S A ++
Sbjct: 458 GPAQSFAWSS 467



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3589 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3643

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3644 LYATGYGAGGRLGIGGTESVSSPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3691

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG + P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3692 LSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3751

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 3752 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 3810

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    PT +D L    V +V CG  F+  +
Sbjct: 3811 DYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVAL 3850



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY  G A
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 2657

Query: 497  AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
              G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 2658 TNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2717

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 2718 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2761



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 19/228 (8%)

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            + GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     
Sbjct: 2586 AAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2643

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVA 475
            AV V               GK++  G+   GRLG G     +  P  +  L    + +VA
Sbjct: 2644 AVTVE--------------GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVA 2689

Query: 476  C--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
               G   + ALT  G V++ G    G+LG          R+   +    + ++ACG+ H 
Sbjct: 2690 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 2749

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            AALTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 2750 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2797



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3589 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3638

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3639 ----TADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS 3694

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3695 EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3754

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3755 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3798


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2760

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2761 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2820

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 2821 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2877

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 2878 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 2925

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2985

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 2986 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3041

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3042 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3094

Query: 614  KR 615
             R
Sbjct: 3095 AR 3096



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +  + VT
Sbjct: 3704 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLLAVT 3753

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3754 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3813

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3814 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3870

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 3918

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3919 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3978

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3979 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4037

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4038 TNAIQRPRLVAALQGKKVNRVACG 4061



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2763 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 2815

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2816 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2875

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2876 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2978

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 2979 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3038

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3039 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3079



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3780 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3839

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3840 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3896

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3897 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3956

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3957 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4002

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4003 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4062

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4063 AHTLAW-STSKPASAGK 4078



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 173/346 (50%), Gaps = 35/346 (10%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           L V  IAC  +  ++V + G + +              +D   PQL++ L+  NV  +A 
Sbjct: 428 LGVTQIACAEKRLLIVXRNGRVXT----------QAYNSDTLVPQLVQGLASRNVVKIAA 477

Query: 304 GE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLDGIHLSYISC 358
               +H  A+  +G++Y+WG G  +   LGHG  V    P+ +S   G   G H+ +I+C
Sbjct: 478 HSDGHHYLALAATGEVYSWGCG--DGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 535

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+CG       
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG------- 588

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                S  +     T  G++++WGDGD G+LG G  +    P+ +  L D ++ +V CG 
Sbjct: 589 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 643

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALT 537
             S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA G+ H  ALT
Sbjct: 644 QFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAAGSTHCLALT 702

Query: 538 STSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
             S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 703 EDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 746



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 164/335 (48%), Gaps = 39/335 (11%)

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           G +G    A+V  P   + L+ + V  +AC E     V R+G + T     YNS  L   
Sbjct: 406 GLIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXT---QAYNSDTL--- 459

Query: 334 SKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
                 +P+ V G  + + + ++  S G  H   + + G ++++G G    LGHGD +  
Sbjct: 460 ------VPQLVQGLASRNVVKIAAHSDG-HHYLALAATGEVYSWGCGDGRRLGHGDTVPL 512

Query: 392 SIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
             P+ +    G +  +    ++CG  ++AA+              T+ G+L+TWG G+ G
Sbjct: 513 EEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGELYTWGRGNYG 558

Query: 448 RLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQLGVPV 505
           RLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G   YG+LG   
Sbjct: 559 RLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG 618

Query: 506 ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
           +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGHG +++   P 
Sbjct: 619 SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 678

Query: 566 LVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 679 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3832 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3880

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3881 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3938

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3939 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3996

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3997 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4055

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4056 NRVACGSAHTLA------WSTSKPA---SAGKL 4079



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 40/322 (12%)

Query: 183 SVVSSSSHGSAHE--DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +VV  ++H   H      + G+V+ WG         G   R+G+  +   +   PK + +
Sbjct: 471 NVVKIAAHSDGHHYLALAATGEVYSWG--------CGDGRRLGHGDTVPLEE--PKVISA 520

Query: 241 ----TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
                    V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+
Sbjct: 521 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580

Query: 297 NVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            V  VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + + 
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVV 637

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            + CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H
Sbjct: 638 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTH 697

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENIC 472
             A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I 
Sbjct: 698 CLAL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIV 741

Query: 473 QVACGHDLSVALTTSGHVYTMG 494
            +ACG   S A  +S + ++MG
Sbjct: 742 GIACGPAQSSA-GSSXYEWSMG 762



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2764

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 2765 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2824

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 2825 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2875



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L     G      VT+ G 
Sbjct: 3703 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLI---GGEQTLLAVTADGK 3757

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3758 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3805

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3806 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3865

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 3866 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 3924

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3925 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3964



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3703 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAV---------- 3752

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3753 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3808

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3809 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3868

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3869 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3912


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/352 (37%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            +P+AV+ T++L   ++A G++   LVT+ G+ ++ GE S GRLG G   +V+ P  I  L
Sbjct: 2721 VPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITAL 2780

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   V  VA   G  H  A+T  G +++WG+G  + G LGHG   S   PR +   L+G 
Sbjct: 2781 SQHVVRKVAVHSGGRHALALTADGRVFSWGEG--DDGKLGHGDVTSLDTPRCIEA-LNGF 2837

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  ++ G  H+A VTS+G L+T+G G +G LGHGD+++   P+ VE+L G R  +VSCG
Sbjct: 2838 RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCG 2897

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        S  +        G +++WGDGD G+LG G  E    P  V  L    +
Sbjct: 2898 ------------SRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV 2945

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
            C V CG   SVALT +GHVYT G   Y +LG   +D  V  PT V+G   +  +  V+ G
Sbjct: 2946 CHVECGAQFSVALTCNGHVYTWGKGDYFRLGHG-SDQHVRWPTLVEGLRGKKVI-GVSVG 3003

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T   +V+ WG   +GQ G+G       PTLV  +   ++ RV CG
Sbjct: 3004 ALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 194/410 (47%), Gaps = 36/410 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +A G +    +T
Sbjct: 3614 GQIYGWGHN-HRGQLGGVEG---------AKVKVPTVCEALSALRPIQLAGGEQTLFAIT 3663

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G +++ G  +GGRLG G    V+ P L+E L  V V+ VA   G  H  A++  G++Y
Sbjct: 3664 SDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVY 3723

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG+K+ C  PR +  +L G  +  ++CG  H+A +T+ G L+T+G G
Sbjct: 3724 SWGEG--EDGKLGHGNKLPCDRPRIIE-SLRGKDVVDVACGGAHSAAITALGELYTWGKG 3780

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L G R   V+CG    A     TD            G +
Sbjct: 3781 RYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGS-GDAQTCAITDEEG---------GTV 3830

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    I +V CG   SVAL+ +G VYT G   Y
Sbjct: 3831 WSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDY 3890

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG  V + +   +    +    V  ++ GA H    T   +VYTWG    GQLG G  
Sbjct: 3891 HRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTT 3950

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNP 608
                 P LV  L++K++ RV CG   T           V  S C  C  P
Sbjct: 3951 TGIQKPRLVAALQNKKINRVSCGSAHT-----------VAWSTCKGCSTP 3989



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 167/345 (48%), Gaps = 30/345 (8%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  +ES   + V  +A   G +H + ++ +GE++SWGE   G+LGHG +     P++IE
Sbjct: 3689 VPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIE 3748

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L G +V  VACG  H+ A+T  G+LYTWG G Y  G LGHG       P+ V   L G 
Sbjct: 3749 SLRGKDVVDVACGGAHSAAITALGELYTWGKGRY--GRLGHGDSDDQLKPKLVEALL-GY 3805

Query: 352  HLSYISCGL--WHTAVVT--SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
             +  ++CG     T  +T    G ++++GDG +G LG G      IP ++E+L GL   +
Sbjct: 3806 RVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIK 3865

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            V CG   + A+              ++ G ++TWG GD  RLGHG  E    P+ V  L 
Sbjct: 3866 VECGSQFSVAL--------------SNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQ 3911

Query: 468  DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
             + +  ++ G    V  T  G VYT G    GQLG     G+   R+   +    +  V+
Sbjct: 3912 GKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVS 3971

Query: 528  CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            CG+ H  A ++        KG +  +    +   + P   D LKD
Sbjct: 3972 CGSAHTVAWSTC-------KGCSTPVAGSSRLPTSIPLQYDLLKD 4009



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/341 (36%), Positives = 167/341 (48%), Gaps = 29/341 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G  +  GEG +NG LG G  R   +   Q  AL    V       VH+   G RHA+ +T
Sbjct: 2750 GKAYACGEG-SNGRLGLGHSR-NVNSPHQITALSQHVVRKVA---VHS---GGRHALALT 2801

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G +FSWGE   G+LGHG    +  P+ IE L+G  V  VA G  H+ AVT SG+LYTW
Sbjct: 2802 ADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTW 2861

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG  ++   P++V  +L G  +  +SCG     T  +   G ++++GDG
Sbjct: 2862 GLGEY--GRLGHGDNLTQLTPKRVE-SLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     S P  V+ L GL    V CG   + A+              T  G +
Sbjct: 2919 DFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVAL--------------TCNGHV 2964

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +   +P  V  L  + +  V+ G    +A+T +G V+  G   +
Sbjct: 2965 YTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDH 3024

Query: 499  GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            GQ G   +     PT V G I    +  VACG+ H  A T+
Sbjct: 3025 GQQGNGSITVNRRPTLVQG-IDGIKITRVACGSSHSVAWTA 3064



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 164/319 (51%), Gaps = 31/319 (9%)

Query: 172  SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
            S  E+ +      V+ +S G       S G+V+ WGEG  +G LG G          +  
Sbjct: 3691 SLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEG-EDGKLGHGN---------KLP 3740

Query: 232  ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
               P+ +ES    DV ++ACG  H+  +T  GE+++WG+   GRLGHG   D   P+L+E
Sbjct: 3741 CDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVE 3800

Query: 292  ILSGVNVELVAC--GEYHTCAVT--RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
             L G  V  VAC  G+  TCA+T    G +++WGDG Y  G LG G    C IP K+  +
Sbjct: 3801 ALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDY--GKLGRGGSDGCKIPTKIE-S 3857

Query: 348  LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
            L G+ +  + CG   +  +++ G ++T+G G +  LGHG       P++V TL+G +   
Sbjct: 3858 LSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVIS 3917

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            +S G  H    VV TD            G+++TWGD D+G+LG G       P  VA L 
Sbjct: 3918 ISTGALH---CVVCTDQ-----------GEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQ 3963

Query: 468  DENICQVACGHDLSVALTT 486
            ++ I +V+CG   +VA +T
Sbjct: 3964 NKKINRVSCGSAHTVAWST 3982



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 170/336 (50%), Gaps = 25/336 (7%)

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            V+    ++ WG     +LG  + + +  PQ ++    +    VA G      VT+SG  Y
Sbjct: 2694 VSGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAY 2753

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
              G+G+     LGH   V+   P +++  +   +    +  G  H   +T+ G +F++G+
Sbjct: 2754 ACGEGSNGRLGLGHSRNVNS--PHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGE 2811

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G  G LGHGD  S   PR +E L G R   V+ G  H+AAV              TS G+
Sbjct: 2812 GDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV--------------TSSGE 2857

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGS 495
            L+TWG G+ GRLGHGD   +L P+ V  L+ + + QV+CG     ++AL   G VY+ G 
Sbjct: 2858 LYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGD 2917

Query: 496  AAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              +G+LG   ++G   P  VD +++   V  V CGA    ALT    VYTWGKG   +LG
Sbjct: 2918 GDFGKLGRGGSEGCSSPCLVD-KLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLG 2976

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            HG   +   PTLV+ L+ K+    V G++  A+ CL
Sbjct: 2977 HGSDQHVRWPTLVEGLRGKK----VIGVSVGALHCL 3008



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 122/253 (48%), Gaps = 19/253 (7%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R     VV  +  G+      +LG+++ WG+G   G LG G+         
Sbjct: 3742 DRPRIIESLRGK--DVVDVACGGAHSAAITALGELYTWGKG-RYGRLGHGD--------- 3789

Query: 229  QTDALLPKAVESTMALDVHNIACGARH----AVLVTKQGEIFSWGEESGGRLGHGREADV 284
              D L PK VE+ +   V ++ACG+      A+   + G ++SWG+   G+LG G     
Sbjct: 3790 SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGC 3849

Query: 285  SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
              P  IE LSG+ +  V CG   + A++ +G +YTWG G Y+   LGHG       P+KV
Sbjct: 3850 KIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHR--LGHGVDEHVRRPKKV 3907

Query: 345  SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
               L G  +  IS G  H  V T  G ++T+GD   G LG G       PR V  L+  +
Sbjct: 3908 M-TLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKK 3966

Query: 405  TTRVSCGVWHTAA 417
              RVSCG  HT A
Sbjct: 3967 INRVSCGSAHTVA 3979



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 128/259 (49%), Gaps = 20/259 (7%)

Query: 173  AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
            A   FR+    V + S+H +A     S G+++ WG G   G LG G++            
Sbjct: 2833 ALNGFRVR--DVAAGSNHSAA---VTSSGELYTWGLG-EYGRLGHGDN---------LTQ 2877

Query: 233  LLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
            L PK VES +   V  ++CG+R A  + + + G ++SWG+   G+LG G     S P L+
Sbjct: 2878 LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLV 2937

Query: 291  EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            + LSG+ V  V CG   + A+T +G +YTWG G Y    LGHGS      P  V G L G
Sbjct: 2938 DKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFR--LGHGSDQHVRWPTLVEG-LRG 2994

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
              +  +S G  H   VT AG +F +GD   G  G+G       P  V+ + G++ TRV+C
Sbjct: 2995 KKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVAC 3054

Query: 411  GVWHTAAVVVATDSSSSSP 429
            G  H+ A       S + P
Sbjct: 3055 GSSHSVAWTAPEPPSVAPP 3073



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++ WG  DK +LG         P+ V   +      VA G      +T SG  Y  G  
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEG 2758

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLG 554
            + G+LG+  +  +        +++  V +VA   G  H  ALT+  +V++WG+G +G+LG
Sbjct: 2759 SNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLG 2818

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            HGD  + ++P  ++ L   +V+ V  G N +A +     L+ W
Sbjct: 2819 HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTW 2861


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3998 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4044

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4208

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4269 --IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K ++++  G
Sbjct: 4327 HTNHVREPTLVTGLQGKNIRQISAG 4351



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 4254

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 4255 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASN 4309

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    + +++ G  H AA T+
Sbjct: 4310 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNIRQISAGRCHSAAWTA 4360



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3998 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4052

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4053 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4155

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4216 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 31/313 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4101 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4210

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4211 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLAL--------------ASNGDVY 4313

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +NI Q++ G   S A T         G +  
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVP 4373

Query: 499  GQLGVPVADGLVP 511
             QLG+P  D L P
Sbjct: 4374 LQLGLP--DTLPP 4384



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3998 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4051

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4097

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4098 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2939 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2986

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2987 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3046

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3047 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3103

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3104 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3151

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3211

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3212 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3267

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3268 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3320

Query: 614  KR 615
             R
Sbjct: 3321 AR 3322



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3932 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3981

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3982 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4041

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4042 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4098

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4099 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4146

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4147 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4206

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4207 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4265

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4266 TNAIQRPRLVAALQGKKVNRVACG 4289



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2989 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3041

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3042 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3101

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3102 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3158

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3159 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3204

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3205 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3264

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3265 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3305



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 469

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 470 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 527

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 528 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 587

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 588 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 635

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 694

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 695 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 747



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4067

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4068 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4124

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4125 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4184

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4185 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4230

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4231 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4290

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4291 AHTLAW-STSKPASAGK 4306



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 402 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 453

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + I ++  S G  H   + + G ++++G G  G
Sbjct: 454 AYNSDTLA---------PQLVQGLASRNIIKIAAHSDG-HHYLALAATGEVYSWGCGDGG 503

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 504 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 549

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 550 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 609

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 610 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 669

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 670 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4060 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4108

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4109 E--DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4166

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4167 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4224

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4225 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4283

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4284 NRVACGSAHTLA------WSTSKPA---SAGKL 4307



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 476 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 526

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 527 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 583

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 584 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 640

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 641 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 700

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 701 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 744

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 745 ACGPAQSFA 753



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2990

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 2991 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3050

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3051 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3101



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3931 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3985

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3986 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4033

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4034 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4093

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4094 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4152

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4153 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4192



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3931 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3980

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3981 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4037 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4096

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4097 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4140


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3007

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3008 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3067

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3068 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3124

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3125 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3172

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3232

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3233 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3288

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3289 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3341

Query: 614  KR 615
             R
Sbjct: 3342 AR 3343



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3953 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4002

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4003 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4062

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G  +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4063 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4119

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4120 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4167

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4168 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4227

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    +   +VYTWG    GQLG G 
Sbjct: 4228 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4286

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4287 TNAIQRPRLVAALQGKKVNRVACG 4310



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3010 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3062

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3063 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3122

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3123 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3179

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3180 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3225

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3226 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3285

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3286 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3326



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   SVALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4029 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4088

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4089 LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4145

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4146 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4205

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4206 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4251

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  +  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4252 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4311

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4312 AHTLAW-STSKPASAGK 4327



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R +   VV  ++ G+      + GD++ WG+G           R+G+S S 
Sbjct: 4081 DRPRVIESLRGT--EVVDVAAGGAHSACVTAAGDLYTWGKGRYG--------RLGHSDSE 4130

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 4131 --DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4188

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V G
Sbjct: 4189 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG 4246

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+ G  H    +  G ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 4247 -LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 4305

Query: 407  RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 4306 RVACGSAHTLA------WSTSKPA---SAGKL 4328



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 37/307 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T   ++ +WG  D+ +     +  +  P  +  L  ++I  +AC
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769

Query: 477 GHDLSVA 483
           G   S A
Sbjct: 770 GPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3011

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3012 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3071

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3072 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3122



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3952 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 4006

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4007 LYATGYGAGGRLGVGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4054

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4055 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4114

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4115 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4173

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4174 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4213



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3952 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 4001

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4002 ----TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4057

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +  + V +VA G  H A +T+   +YTWG
Sbjct: 4058 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4117

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4118 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3954 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4004 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G  +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4064 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4168

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    +   +VYTWG    GQLG G 
Sbjct: 4229 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4287

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACG 4311



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4090 LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4146

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4147 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4207 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  +  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4253 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4312

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4313 AHTLAW-STSKPASAGK 4328



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R +   VV  ++ G+      + GD++ WG+G           R+G+S S 
Sbjct: 4082 DRPRVIESLRGT--EVVDVAAGGAHSACVTAAGDLYTWGKGRYG--------RLGHSDSE 4131

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 4132 --DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4189

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V G
Sbjct: 4190 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG 4247

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+ G  H    +  G ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 4248 -LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 4306

Query: 407  RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 4307 RVACGSAHTLA------WSTSKPA---SAGKL 4329



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 37/307 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T   ++ +WG  D+ +     +  +  P  +  L  ++I  +AC
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769

Query: 477 GHDLSVA 483
           G   S A
Sbjct: 770 GPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 4007

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4008 LYATGYGAGGRLGVGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4055

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4115

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4174

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4175 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 4002

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4003 ----TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4058

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +  + V +VA G  H A +T+   +YTWG
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3955 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4065 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4169

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4230 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4289 TNAIQRPRLVAALQGKKVNRVACG 4312



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4091 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4147

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4208 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4313

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4314 AHTLAW-STSKPASAGK 4329



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + I ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIIKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4131

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4132 E--DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4189

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4247

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4248 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4306

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4307 NRVACGSAHTLAW------STSKPA---SAGKL 4330



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4008

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4056

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4116

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4175

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4176 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4003

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4004 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4059

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 3955 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4004

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4005 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G  +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4065 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4169

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    +   +VYTWG    GQLG G 
Sbjct: 4230 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4288

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4289 TNAIQRPRLVAALQGKKVNRVACG 4312



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   SVALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4091 LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4147

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4208 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  +  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4254 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4313

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4314 AHTLAW-STSKPASAGK 4329



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R +   VV  ++ G+      + GD++ WG+G           R+G+S S 
Sbjct: 4083 DRPRVIESLRGT--EVVDVAAGGAHSACVTAAGDLYTWGKGRYG--------RLGHSDSE 4132

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 4133 --DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V G
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG 4248

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+ G  H    +  G ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 4249 -LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 4307

Query: 407  RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 4308 RVACGSAHTLA------WSTSKPA---SAGKL 4330



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 37/307 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T   ++ +WG  D+ +     +  +  P  +  L  ++I  +AC
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769

Query: 477 GHDLSVA 483
           G   S A
Sbjct: 770 GPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 4008

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4009 LYATGYGAGGRLGVGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4056

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4116

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4175

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4176 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 4003

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4004 ----TADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4059

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +  + V +VA G  H A +T+   +YTWG
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 216/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3016

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3017 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3076

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3077 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3133

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3134 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3181

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3241

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3242 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3297

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3298 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3350

Query: 614  KR 615
             R
Sbjct: 3351 AR 3352



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3962 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4011

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4012 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4071

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4072 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4128

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G     V+CG      + +  D +            +
Sbjct: 4129 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDT------------V 4176

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4177 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4236

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4237 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4295

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4296 TNAIQRPRLVAALQGKKVNRVACG 4319



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3019 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3071

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3072 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3131

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3132 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3188

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3189 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3234

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3235 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3294

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3295 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3335



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 156/317 (49%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4097

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G H
Sbjct: 4098 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHH 4154

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4214

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4215 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4260

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4261 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4320

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4321 AHTLAW-STSKPASAGK 4336



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4090 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4138

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4139 E--DQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4196

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4197 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4254

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4255 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4313

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4314 NRVACGSAHTLA------WSTSKPA---SAGKL 4337



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3020

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3021 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3080

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3081 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3131



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3961 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4015

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4016 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4063

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4064 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4123

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V +VACG+       LT    V++WG G
Sbjct: 4124 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDG 4182

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4183 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4222



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3961 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4010

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4011 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4066

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4067 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4126

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+   V  V CG      +CL
Sbjct: 4127 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4170


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W +++D +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTIDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3955 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4065 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4169

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4230 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4289 TNAIQRPRLVAALQGKKVNRVACG 4312



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 165/345 (47%), Gaps = 36/345 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTS 538
            GQ G    +G       PT V G +    +  VACG+ H  A T+
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4091 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4147

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4208 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4313

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4314 AHTLAW-STSKPASAGK 4329



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4083 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4131

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4132 E--DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4189

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4247

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4248 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4306

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4307 NRVACGSAHTLA------WSTSKPA---SAGKL 4330



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 34/287 (11%)

Query: 310  AVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A T    ++ WG  D     GL G   KV  +     S  L  +++  ++ G      VT
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3009

Query: 368  SAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSC--GVWHTAAVVVATDS 424
              G ++  G+ + G LG G    T  IPR++  L      +V+   G  H  A+ V    
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD--- 3066

Query: 425  SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                       GK+F+WG+GD G+LGH  +     P  +  L  + I  +ACG   S AL
Sbjct: 3067 -----------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAY--HVAALTS 538
            T+SG +YT G   YG+LG     G   T++  ++ +      V +VACG+      ALT 
Sbjct: 3116 TSSGELYTWGLGEYGRLG----HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 539  TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               V++WG G  G+LG G  +  N P  ++ L  + V ++ CG  F+
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4008

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4056

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4116

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4175

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4176 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4003

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4004 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4059

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 198/367 (53%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D LLP  + +  A  + +IACGA H +  ++ + E
Sbjct: 37  WGRG-EDGQLGHGD---------TDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNE 86

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I  L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 87  LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWG--R 144

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 145 NQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 203

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     IP +V ++   +   V+CG  HT +V              +S G L+T+G  
Sbjct: 204 LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--------------SSLGGLYTYGWS 249

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHG+ E  L P+ +  L D+ I QV+ G   S+ALT++G +Y  G   +GQ+GV 
Sbjct: 250 KYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVG 309

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     +  V+ ++CG  H  A+T    V++WG+G NGQLGHGD  +RNS
Sbjct: 310 DNVDRCSPVQVKFPHDQKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNS 368

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 369 PKIIEAL 375



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 177/342 (51%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H V +     + SWG    G+LGHG   D   P  +  L    ++ +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  +LY+WG G +  G LGHG+     IP+ +   L G+ +  I+CG  H   VT
Sbjct: 78  LAYSESRNELYSWGWGDF--GRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++T +G+    V+ G  H+ A+         
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI--------- 185

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  R  PE V+ +  + +  VACG   ++++++ 
Sbjct: 186 -----TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSL 240

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP ++   +++  + +V+ G  H  ALTST  +Y WG
Sbjct: 241 GGLYTYGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWG 299

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +R SP  V F  D++V ++ CG   T  +
Sbjct: 300 WNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + S+   + H  A+ +  S  +++ WG G           R+G+  S  +D L+P+ + +
Sbjct: 67  IDSIACGADHTLAYSE--SRNELYSWGWGDFG--------RLGHGNS--SDLLIPQPIIA 114

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT +GE+ SWG    G+LG G   D   PQ I+   GV +++
Sbjct: 115 LQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKM 174

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+ A+T +G+LY WG G Y  G LG G +   WIP KVS ++D   +  ++CG 
Sbjct: 175 VAAGAEHSVAITENGELYGWGWGRY--GNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGW 231

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S G L+T+G   +G LGHG+   + +P++++ L     ++VS G  H+ A+  
Sbjct: 232 RHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMAL-- 289

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS G L+ WG    G++G GD   R  P  V    D+ + Q++CG   
Sbjct: 290 ------------TSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRH 337

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A+T   +V++ G    GQLG
Sbjct: 338 TIAVTEKENVFSWGRGTNGQLG 359



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D   P  V+      V  I+CG RH + VT++  +FSWG  + G+LGHG   D + P++
Sbjct: 312 VDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKI 371

Query: 290 IEILS 294
           IE LS
Sbjct: 372 IEALS 376


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 1578 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 1624

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 1625 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1684

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 1685 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1741

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 1742 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 1788

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 1789 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 1848

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 1849 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 1906

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 1907 HTNHVREPTLVTGLQGKNVRQISAG 1931



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 1667 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1726

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 1727 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 1783

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 1784 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 1834

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 1835 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 1889

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 1890 GDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 1940



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 1578 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 1632

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 1633 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1689

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 1690 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 1735

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 1736 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 1795

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 1796 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 1854

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 1855 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 1883



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 1681 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 1730

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 1731 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 1790

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 1791 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 1847

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 1848 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 1893

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 1894 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 1953

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 1954 LQLGLP 1959



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 1578 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 1631

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 1678

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 1679 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 1738

Query: 494  GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
            G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G  
Sbjct: 1739 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 1796

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 1797 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 1834


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/389 (35%), Positives = 207/389 (53%), Gaps = 33/389 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEI 292
           +P   E+  AL+V  +A G++    VT +G+++S GE + GRLG G  +  V  P+ I  
Sbjct: 18  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 77

Query: 293 LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           LS   V+ VA   G  H  A+T  G +++WG+G  + G LGH S+++C  PR +   L  
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 134

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+ V+ L G R  +V+C
Sbjct: 135 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 194

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G    A  +  TD            G +F+WGDGD G+LG G  E    P+ +  L  + 
Sbjct: 195 GS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 242

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEV 526
           +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +  V  V
Sbjct: 243 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVH-V 298

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           A GA H  A+T + +VY WG   +GQ G+G       PTLV  L+ +++ RV CG + + 
Sbjct: 299 AVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 358

Query: 587 IICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
                 W ++VD +   S H P  F+  R
Sbjct: 359 -----AW-TTVDVAT-PSVHEPVLFQTAR 380



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 989  GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1038

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 1039 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1098

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 1099 SWGEA--KDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1155

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 1156 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 1203

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 1204 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1263

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 1264 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1322

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 1323 TNAIQRPRLVAALQGKKVNRVACG 1346



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 47  GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 99

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 100 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 159

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 160 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 216

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 217 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 262

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 263 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 322

Query: 499 GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 323 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 363



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES 1124

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 1125 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 1181

Query: 353  LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 1182 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 1241

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 1242 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1287

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 1288 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 1347

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 1348 AHTLAW-STSKPASAGK 1363



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 1117 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 1165

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 1166 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 1223

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 1224 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 1281

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 1282 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 1340

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 1341 NRVACGSAHTLAW------STSKPA---SAGKL 1364



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 988  SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 1042

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 1043 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 1090

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+   G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 1091 LSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 1150

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 1151 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 1209

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 1210 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1249



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 7/159 (4%)

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G  DK +LG         P     L   N+ QVA G     A+T  G VY+ G A  G+L
Sbjct: 1   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 502 GVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           G+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+LGH  +
Sbjct: 61  GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 120

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 121 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 159



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 988  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 1037

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 1038 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 1093

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 1094 EGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 1153

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 1154 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 1197


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 198/393 (50%), Gaps = 45/393 (11%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 2623 DVFLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 2669

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 2670 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2729

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 2730 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2786

Query: 379  SFGALGHGDHISTSIPREVETLRGL-------RTTRVSCGVWHTAAVVVATDSSSSSPSG 431
             +G LG G+  +  +P  V  L G        ++  V+CG+ HT AV             
Sbjct: 2787 DYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV------------- 2833

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            ST    ++ +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVY
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 2893

Query: 492  TMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            T G      +G+P         P +V   +A   +E+VA GA H  AL ST  VY WG  
Sbjct: 2894 TFGQDRL--IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 2950

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + GQLG G  ++   PTLV  L+ K ++++  G
Sbjct: 2951 SEGQLGLGHTNHVREPTLVTVLQGKNIRQISAG 2983



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 37/336 (11%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            ++F WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 2623 DVFLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 2677

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 2678 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2734

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 2735 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 2780

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ-------VACGHDLSVALTTSG-HV 490
            FT+G+GD GRLG G+   +  PE V  L    I Q       VACG + ++A++T G  V
Sbjct: 2781 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMV 2840

Query: 491  YTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            +  G   YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+  
Sbjct: 2841 WAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 2899

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               L  G   N N P  V  L    ++ V  G   T
Sbjct: 2900 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 2935



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 26/298 (8%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 2712 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2771

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL------SY-ISCGLW 361
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +      SY ++CGL 
Sbjct: 2772 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSYSVACGLN 2828

Query: 362  HTAVVTSAGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V++ G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+  
Sbjct: 2829 HTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL-- 2886

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                        T  G ++T+G      L  G       P+ V  L    I  VA G + 
Sbjct: 2887 ------------TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEH 2934

Query: 481  SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            ++AL ++G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 2935 TLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 2992



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 36/315 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 2726 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 2775

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL-------VACGEYHTCAVTR 313
              G++F++G    GRLG G  ++   P+ +  L G  +         VACG  HT AV+ 
Sbjct: 2776 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVST 2835

Query: 314  SGDL-YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
             G + + +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH+
Sbjct: 2836 DGSMVWAFGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHV 2892

Query: 373  FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            +TFG      L  G   + + P++V  L G+    V+ G  HT A+              
Sbjct: 2893 YTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL-------------- 2938

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVY 491
             S G ++ WG   +G+LG G       P  V  L  +NI Q++ G   S A T       
Sbjct: 2939 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPR 2998

Query: 492  TMGSAAYGQLGVPVA 506
              G +   QLG+P A
Sbjct: 2999 APGVSVPLQLGLPDA 3013



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 29/283 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D++ WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 2623 DVFLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 2676

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
            G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 2723

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 2724 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2783

Query: 494  GSAAYGQLGV-PVADGLVPTRVDG----EIAESFVE--EVACGAYHVAAL-TSTSKVYTW 545
            G+  YG+LG+   ++  +P RV      +I +++ +   VACG  H  A+ T  S V+ +
Sbjct: 2784 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAF 2843

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G G  G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 2844 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2886


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3639 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 3685

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3745

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 3746 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 3849

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 3850 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3909

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 3910 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 3967

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PT+V  L+ K V+++  G
Sbjct: 3968 HTNHVREPTVVTGLQGKNVRQISAG 3992



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 21/292 (7%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 3728 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3787

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 3788 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 3844

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++++ L G+   +V+CG   + A+         
Sbjct: 3845 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL--------- 3895

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 3896 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN 3950

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +  PT V G +    V +++ G  H AA T+
Sbjct: 3951 GDVYAWGSNSEGQLGLGHTNHVREPTVVTG-LQGKNVRQISAGRCHSAAWTA 4001



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3639 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 3693

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 3694 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3750

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 3751 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 3796

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 3797 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 3856

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 3857 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 3915

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 3916 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 3944



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 3742 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 3791

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 3792 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 3851

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 3852 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3908

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 3909 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 3954

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 3955 AWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4014

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4015 LQLGLP 4020



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 28/279 (10%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3639 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 3692

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 3738

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 3739 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 3798

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGA 549
             G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G 
Sbjct: 3799 FGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 3856

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 3857 YGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 3895



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203 VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 601

Query: 261 KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
            +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 602 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 661

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 662 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 718

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 719 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 766

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 826

Query: 498 YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 827 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 882

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
           G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 883 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 935

Query: 614 KR 615
            R
Sbjct: 936 AR 937



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 1545 GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1594

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 1595 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1654

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 1655 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1711

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 1759

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 1760 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1819

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 1820 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1878

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 1879 TNAIQRPRLVAALQGKKVNRVACG 1902



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 163/342 (47%), Gaps = 28/342 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 604 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 656

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 657 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 716

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 717 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 773

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 774 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 819

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 820 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 879

Query: 499 GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           GQ G         PT V G +    +  VACG+ H  A T+ 
Sbjct: 880 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 920



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 1680

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 1681 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 1737

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 1738 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 1797

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 1798 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1843

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 1844 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 1903

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 1904 AHTLAW-STSKPASAGK 1919



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 127/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 1673 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 1721

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 1722 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 1779

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 1780 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 1837

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 1838 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 1896

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 1897 NRVACGSAHTLA 1908



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 546 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 605

Query: 490 VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
           VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 606 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 665

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 666 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 716



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 1544 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 1598

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 1599 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 1646

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 1647 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 1706

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 1707 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 1765

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 1766 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1805



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 1593

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 1594 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 1649

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 1650 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 1709

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 1710 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 1753


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 201/385 (52%), Gaps = 31/385 (8%)

Query: 189 SHGSAHEDFDSLGDVF-IWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G++H      G+V   WG G  +G LG G+           D L+P  +    A  + 
Sbjct: 20  SAGASHSVALLAGNVLCTWGRG-EDGQLGHGDAE---------DRLVPTVISGFDAPGIT 69

Query: 248 NIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
           ++ CGA H    ++ + +++SWG    GRLGHG   DV  PQ ++ L G+ ++ +ACG+ 
Sbjct: 70  SVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDS 129

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H  AVT +G++ +WG     +G LG G+     +P+ +    +GI +  I+ G  HTA V
Sbjct: 130 HCLAVTMAGEVLSWG--RNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAV 186

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G ++ +G G +G LG GD     +P +V ++ G +   V+CG  HT  V        
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITV-------- 238

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 +S G L+T+G    G+LGHGD E  L P  V  L D +  Q++ G   ++ALT+
Sbjct: 239 ------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTS 292

Query: 487 SGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            G +Y  G   +GQ+G    AD   P +V+    E  V +VACG  H  A T    V+ W
Sbjct: 293 DGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP-EEQKVAQVACGWRHTLAFTEKKNVFAW 351

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFL 570
           G+G +GQLGHG+  +RN+P ++D L
Sbjct: 352 GRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 169/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ + +    V+ WG G           R+G+  S  TD   P+ V++
Sbjct: 68  ITSVICGADHTTAYSEDEH--QVYSWGWGDFG--------RLGHGNS--TDVFTPQPVKA 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  +ACG  H + VT  GE+ SWG    G+LG G   D   PQ I+   G++V++
Sbjct: 116 LQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKM 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT  GD+Y WG G Y  G LG G +   ++P KVS +++G  +  ++CG 
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRY--GNLGLGDRNDRFVPEKVS-SVEGDKMVLVACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G L+T+G   +G LGHGD     +P +VE L+   T+++S G  HT A+  
Sbjct: 233 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G GD      P  V    ++ + QVACG   
Sbjct: 291 ------------TSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A T   +V+  G    GQLG
Sbjct: 339 TLAFTEKKNVFAWGRGTSGQLG 360



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 20/339 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + +WG    G+LGHG   D   P +I       +  V CG  HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 309 CAVTR-SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A +     +Y+WG G +  G LGHG+    + P+ V   L GI +  ++CG  H   VT
Sbjct: 79  TAYSEDEHQVYSWGWGDF--GRLGHGNSTDVFTPQPVKA-LQGIKIKQLACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            AG + ++G    G LG G    + +P+ ++   G+    ++ G  HTAAV         
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAV--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G ++ WG G  G LG GD+  R  PE V+ +  + +  VACG   ++ +++S
Sbjct: 187 -----TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSS 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP +V+  + +S   +++ G  H  ALTS  K+Y WG
Sbjct: 242 GSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               GQ+G GD  +  SP  V+F ++++V +V CG   T
Sbjct: 301 WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHT 339



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H+  + +   L T+G G  G LGHGD     +P  +        T V CG  HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A              S    ++++WG GD GRLGHG+      P+ V  L    I Q+A
Sbjct: 79  TAY-------------SEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHVA 534
           CG    +A+T +G V + G    GQLG+    D L+P  +      S V+ +A GA H A
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAEHTA 184

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A+T    +Y WG G  G LG GD+++R  P  V  ++  ++  V CG   T  +
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITV 238



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           V+ GA H  AL + + + TWG+G +GQLGHGD ++R  PT++       +  V+CG + T
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFG 610
                    S  +H V S     FG
Sbjct: 79  TAY------SEDEHQVYSWGWGDFG 97



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V       V  +ACG RH +  T++  +F+WG  + G+LGHG   D + P +I+ LS
Sbjct: 318 PAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 218/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3269

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ +  LS   V+ VA   G  H  A+T  G +
Sbjct: 3270 VEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3329

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3330 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3386

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3387 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3434

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3494

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3495 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3550

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3551 GNGTTTVNRKPTLVHGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3603

Query: 614  KR 615
             R
Sbjct: 3604 AR 3605



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 4211 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4260

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4261 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4320

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI ++ ++ G  H+A VT+AG L+T+G G
Sbjct: 4321 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVADVAAGGAHSACVTAAGDLYTWGKG 4377

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4378 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 4425

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4426 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4485

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4486 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4544

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4545 TNAIQRPRLVAALQGKKVNRVACG 4568



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3272 GKVYACGEA-TNGRLGLGLSSGTVPIPRQVTALSSYVVKKVA---VHS---GGRHATALT 3324

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3325 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3384

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3385 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3441

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3442 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3487

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3488 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3547

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3548 GQQG----NGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVAWTTV 3588



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 35/355 (9%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E   +L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 703  PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 752

Query: 295  GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
              N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 753  SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISTFSGKQA 810

Query: 350  GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 811  GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 870

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 871  CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 918

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
            ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 919  DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 977

Query: 529  GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
            G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 978  GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4346

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4347 LRGIEVADVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4403

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4404 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4463

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4464 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4509

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4510 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4569

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4570 AHTLAW-STSKPASAGK 4585



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 685 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT---Q 736

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 737 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 786

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ + T  G +  +    ++CG  ++AA+              T+ G+
Sbjct: 787 RLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 832

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 833 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 892

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 893 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 952

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 953 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
            +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 759  IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISTFSGKQ-------- 809

Query: 239  ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                   V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 810  ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 866

Query: 299  ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
              VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 867  IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 923

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
             CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 924  RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 983

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
            A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 984  AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDTKHIVGI 1027

Query: 475  ACGHDLSVA 483
            ACG   S A
Sbjct: 1028 ACGPAQSFA 1036



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 11/176 (6%)

Query: 429  PSGSTSCG----KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            PSG  S      K+F WG  DK +LG         P     L   N+ QVA G     A+
Sbjct: 3209 PSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3268

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSK 541
            T  G VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   K
Sbjct: 3269 TVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGK 3328

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            V++WG+G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3329 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3384



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 4210 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4264

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4265 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4312

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4313 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLY 4372

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 4373 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 4431

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4432 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4471



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 4210 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4259

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4260 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4315

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4316 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWG 4375

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4376 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4419


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G +++V  P+LI  L
Sbjct: 3277 LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFL 3336

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+ VS   PR +  +L   
Sbjct: 3337 SQYMIKKVAVHSGGKHALALTQDGKIFSWGEG--EDGKLGHGNSVSLDKPRLIE-SLKSK 3393

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD  +   P+ V++L G R  +V+CG
Sbjct: 3394 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3453

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + +  D            G +++WGDGD G+LG G  +    P  +  L    +
Sbjct: 3454 SRDAQTMALTAD------------GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3501

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             Q+ CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  V  VA G
Sbjct: 3502 VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKVV-HVAVG 3559

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L D +V RV CG
Sbjct: 3560 ALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3611



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 187/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +  G +  
Sbjct: 4255 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPVLCESLSALRPVQLTGGEQTL 4304

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
            + VT  G++++ G  + GRLG G    V  P L+E +  V V+ VA   G  H  A++  
Sbjct: 4305 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4364

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++    P+ +   L G  +  I+CG  H+A +TSAG L+T
Sbjct: 4365 GHVYSWGEG--DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4421

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4422 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4472

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG +YT G
Sbjct: 4473 ---VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWG 4529

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A T   +V+TWG    GQLG
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4590 DGTTSALQRPRLVHALQGKKITRVACG 4616



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 170/329 (51%), Gaps = 23/329 (6%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  G+GT
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3315

Query: 325  YNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
              +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G  G L
Sbjct: 3316 --NGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            GHG+ +S   PR +E+L+  R   ++CG  H+AA+              TS G+L+TWG 
Sbjct: 3374 GHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAI--------------TSSGELYTWGL 3419

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQL 501
            G+ GRLGHGD   ++ P+ V  L+ + + QVACG     ++ALT  G VY+ G   +G+L
Sbjct: 3420 GEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKL 3479

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G   +DG     +   +    V ++ CGA    ALT   +V+TWGKG   +LGHG+  + 
Sbjct: 3480 GRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              PTLV+ L+ K+V  V  G    A+ CL
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVG----ALHCL 3564



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 161/333 (48%), Gaps = 25/333 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S     ++P  +ES   + V  +A   G +H + ++ +G 
Sbjct: 4311 GKVYATGYGAAGRLGIGGTDS----VMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 4366

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+LIE L G  +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4427 Y--GRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4483

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      IP ++E+L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4484 LGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL--------------TRSGAIYTWG 4529

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA T  G V+T G    GQLG
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
                  L   R+   +    +  VACG+ H  A
Sbjct: 4590 DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4622



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 169/348 (48%), Gaps = 31/348 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+          ++   PK +       +  +A   G +HA+ 
Sbjct: 3306 GKLYACGEG-TNGRLGLGD---------DSNVCEPKLIPFLSQYMIKKVAVHSGGKHALA 3355

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G+IFSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LY
Sbjct: 3356 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3415

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V  +L G  +  ++CG     T  +T+ G ++++G
Sbjct: 3416 TWGLGEY--GRLGHGDTATQMKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3472

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  ++ L GL   ++ CG   + A+              T  G
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL--------------TKYG 3518

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + +  VA G    +A+T +G VY  G  
Sbjct: 3519 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDN 3578

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             +GQ G           +  E+ ++ V  V+CG+ H  A   T +  T
Sbjct: 3579 DHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAT 3626



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 174/361 (48%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G ++         + +G E    +PQ +   S
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYGSET--QYPQRVYGFS 493

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              V ++A      H  A+T+   +Y+WG+G  + G LGHG +V    P+ V   +D  +
Sbjct: 494 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 550

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++I+CG  ++AV++S G L+T+G G++G LGHG+  +  IP  V  L G     V+CG 
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGS 610

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             +  + V            T+ G +F+WGDG+ G+LG G  +    P+ V  L+D N+ 
Sbjct: 611 GDSQTLCV------------TASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   +V   +    V+E+  G +H
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V ALT    VY WG+   GQ+          PTL   L  K +  + CGL  +   C   
Sbjct: 719 VLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSA 778

Query: 593 W 593
           W
Sbjct: 779 W 779



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 29/304 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G +R+ Y          PK +E  +  
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHG-NRLMYDR--------PKLIEELLGT 4398

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+L+E L    V  VACG
Sbjct: 4399 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4458

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C IP K+  +L G+ +  + CG   
Sbjct: 4459 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKIPMKIE-SLAGLGVIKVECGSQF 4515

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4516 SVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4571

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 4572 ----------TDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621

Query: 483  ALTT 486
            A +T
Sbjct: 4622 AWST 4625



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 153/312 (49%), Gaps = 37/312 (11%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++++S S G+ +        V+ WG G   G LG G+ RV Y          PK VE+ +
Sbjct: 498 TMIASHSDGTHYLALTQDSSVYSWGNG-DGGRLGHGD-RVWYDE--------PKLVEALV 547

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             ++  IACG+ ++ +++  GE+++WG  + GRLGHG   +V  P L+  L+G  V  VA
Sbjct: 548 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVA 607

Query: 303 C--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           C  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I+++ + CG 
Sbjct: 608 CGSGDSQTLCVTASGIVFSWGDGNY--GKLGRGGCDGSKTPKIVDKLLD-INVAKVYCGG 664

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T+ G ++T+G G    LGHG+      P+ +E L+  +   +  G +H  A+  
Sbjct: 665 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLAL-- 722

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVAC 476
                       T    ++ WG  D G+    LG    EP L P     L  +NI  +AC
Sbjct: 723 ------------TEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPT----LSGKNIIGLAC 766

Query: 477 GHDLSVALTTSG 488
           G   S A  TS 
Sbjct: 767 GLTQSFAWCTSA 778



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 123/251 (49%), Gaps = 15/251 (5%)

Query: 182  SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            + +V  +  G       S G ++ WG+G   G LG G+           D L PK VE+ 
Sbjct: 4398 TEIVDIACGGHHSAAITSAGWLYTWGKG-RYGRLGHGDSE---------DQLTPKLVEAL 4447

Query: 242  MALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                V ++ACG+  A  + VT    ++SWG+   G+LG G       P  IE L+G+ V 
Sbjct: 4448 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVI 4507

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKV+  L G  +  I+ G
Sbjct: 4508 KVECGSQFSVALTRSGAIYTWGKGDYHR--LGHGTDDHVRRPRKVAA-LQGKKIISIATG 4564

Query: 360  LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              H    T  G +FT+GD   G LG G   +   PR V  L+G + TRV+CG  HT A  
Sbjct: 4565 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4624

Query: 420  VATDSSSSSPS 430
                + S  P+
Sbjct: 4625 TMKATQSRMPA 4635



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 119/241 (49%), Gaps = 16/241 (6%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GS H     S G+++ WG G   G LG G+             + PK V+S +   V  +
Sbjct: 3401 GSGHSAAITSSGELYTWGLG-EYGRLGHGD---------TATQMKPKLVQSLVGQRVIQV 3450

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+R A  + +T  G ++SWG+   G+LG G       P LI+ L+G+ V  + CG   
Sbjct: 3451 ACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3510

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+T+ G+++TWG G Y    LGHG+      P  V G L G  + +++ G  H   VT
Sbjct: 3511 SLALTKYGEVWTWGKGDYFR--LGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVT 3567

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
              G ++ +GD   G  G+G  I    P  V  L   R  RVSCG  H+ A V+    +++
Sbjct: 3568 DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPATN 3627

Query: 428  S 428
            +
Sbjct: 3628 N 3628



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +   +  +L  +    ++ G      VT+ G 
Sbjct: 4258 SGAIYGWGHN--HRGQLGGLEGAKVKLPV---LCESLSALRPVQLTGGEQTLLAVTADGK 4312

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 4313 VYATGYGAAGRLGIGGTDSVMVPTLLESIQ------------HVFVKKVAVNSGGKHCLA 4360

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 4361 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4420

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  + +  V +VACG+     L  T    V++WG G
Sbjct: 4421 TWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4479

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4480 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4519



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAV---------- 4307

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    + +VA   G    +AL++
Sbjct: 4308 ----TADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4363

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  E+  + + ++ACG +H AA+TS   +YTWG
Sbjct: 4364 EGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4423

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++ +P LV+ L+D +V  V CG      +C+
Sbjct: 4424 KGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4467



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+  G    +A+T  G VY  G 
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG+   D  +VPT ++  I   FV++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 4319 GAAGRLGIGGTDSVMVPTLLES-IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4377

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++   + P L++ L   ++  + CG + +A I    W+
Sbjct: 4378 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4419


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 191/367 (52%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ-GE 264
           WG G  +G LG G+           D L+P  +    A  + ++ CGA H    +++  +
Sbjct: 45  WGRG-EDGQLGHGDAE---------DRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQ 94

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +DV  PQ +  L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 95  VYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWG--R 152

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +GI +  I+ G  HTA VT  G L+ +G G +G LG
Sbjct: 153 NQNGQLGLGTTEDSLLPQKIQA-FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLG 211

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P +V  + G +   ++CG  HT  V              +S G L+T+G  
Sbjct: 212 LGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITV--------------SSSGILYTYGWS 257

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHGD E  LFP  V  L D +  Q++ G   ++ALT+ G +Y  G   +GQ+G  
Sbjct: 258 KYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAG 317

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V    AE  V +VACG  H  A T    V+ WG+G +GQLGHG+  +RN 
Sbjct: 318 DSVDHCSPVQVMFP-AEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNK 376

Query: 564 PTLVDFL 570
           P ++D +
Sbjct: 377 PLMIDAI 383



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/322 (34%), Positives = 165/322 (51%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ + +    V+ WG G           R+G+  S  +D   P+ V +
Sbjct: 75  ITSVICGADHTTAYSEEEQ--QVYSWGWGDFG--------RLGHGNS--SDVFTPQPVRA 122

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  +ACG  H + VT  GE+ SWG    G+LG G   D   PQ I+   G+ V++
Sbjct: 123 LQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKM 182

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT  GDLY WG G Y  G LG G +   ++P KVS  ++G  +  I+CG 
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRFVPEKVS-LVEGEKMVLIACGW 239

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G L+T+G   +G LGHGD      P +VE L+   T+++S G  HT A+  
Sbjct: 240 RHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMAL-- 297

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G GD      P  V    ++ + QVACG   
Sbjct: 298 ------------TSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRH 345

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A T   +V+  G    GQLG
Sbjct: 346 TLAYTEKKNVFAWGRGTSGQLG 367



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 170/339 (50%), Gaps = 20/339 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V + +   + SWG    G+LGHG   D   P +I       +  V CG  HT
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A +     +Y+WG G +  G LGHG+    + P+ V   L GI +  ++CG  H   VT
Sbjct: 86  TAYSEEEQQVYSWGWGDF--GRLGHGNSSDVFTPQPVRA-LQGIKIKQMACGDSHCLAVT 142

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++   G+    ++ G  HTAAV         
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAV--------- 193

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  R  PE V+ +  E +  +ACG   ++ +++S
Sbjct: 194 -----TEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSS 248

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D L P +V+  + +S   +++ G  H  ALTS  K+Y WG
Sbjct: 249 GILYTYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWG 307

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               GQ+G GD  +  SP  V F  +++V +V CG   T
Sbjct: 308 WNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHT 346



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 112/235 (47%), Gaps = 17/235 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H+  +     L ++G G  G LGHGD     +P  +      R T V CG  HT
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A              S    ++++WG GD GRLGHG+      P+ V  L    I Q+A
Sbjct: 86  TAY-------------SEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESF-VEEVACGAYHV 533
           CG    +A+T  G V + G    GQLG+    D L+P ++  +  E   V+ +A GA H 
Sbjct: 133 CGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKI--QAFEGICVKMIAAGAEHT 190

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           AA+T    +Y WG G  G LG GD+++R  P  V  ++ +++  + CG   T  +
Sbjct: 191 AAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITV 245



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GD++ WG G   G LG G+         + D  +P+ V       +  IACG RH + V+
Sbjct: 197 GDLYGWGWG-RYGNLGLGD---------RNDRFVPEKVSLVEGEKMVLIACGWRHTITVS 246

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G ++++G    G+LGHG   D   P  +E L   +   ++ G  HT A+T  G LY W
Sbjct: 247 SSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGW 306

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G   +  G +G G  V    P +V    +   ++ ++CG  HT   T   ++F +G G+ 
Sbjct: 307 GWNKF--GQVGAGDSVDHCSPVQVMFPAE-QKVAQVACGWRHTLAYTEKKNVFAWGRGTS 363

Query: 381 GALGHGDHISTSIPREVETL 400
           G LGHG+ +  + P  ++ +
Sbjct: 364 GQLGHGEIVDRNKPLMIDAI 383



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  +ACG RH +  T++  +F+WG  + G+LGHG   D + P +I+ +S
Sbjct: 336 VAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAIS 384


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 33/389 (8%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEI 292
            +P   E+  AL+V  +A G++    VT +G++++ GE + GRLG G     V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTA 3045

Query: 293  LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            LS   V+ VA   G  H  A+T  G +++WG+G  + G LGH S+++C  PR +   L  
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3102

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
              +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+ V+ L G R  +V+C
Sbjct: 3103 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G    A  +  TD            G +F+WGDGD G+LG G  E    P+ +  L  + 
Sbjct: 3163 GS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 3210

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEV 526
            +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +  V  V
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVH-V 3266

Query: 527  ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            A GA H  A+T   +VY WG   +GQ G+G       PTLV  L+ +++ RV CG + + 
Sbjct: 3267 AVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326

Query: 587  IICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
                  W ++VD +   S H P  F+  R
Sbjct: 3327 -----AW-TTVDMAT-PSVHEPVLFQTAR 3348



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3958 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4007

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4008 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4067

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI L  ++ G  H+A VT+AG L+T+G G
Sbjct: 4068 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIELVDVAAGGAHSACVTAAGDLYTWGKG 4124

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 4172

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4173 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4232

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4233 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4291

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4292 TNAIQRPRLVPALQGKKVNRVACG 4315



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQVTALSSYVVKKVA---VHS---GGRHATALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 3231 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3290

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3291 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3331



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     ++P  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4093

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ +  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4094 LRGIELVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4150

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4151 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4210

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4211 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4256

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4257 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGS 4316

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4317 AHTLAW-STSKPASAGK 4332



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 37/307 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T   ++ +WG  D+ +     +  +  P  +  L  ++I  +AC
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769

Query: 477 GHDLSVA 483
           G   S A
Sbjct: 770 GPAQSFA 776



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3957 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4011

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4012 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4059

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4060 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLY 4119

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 4120 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 4178

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4179 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4218



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3957 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4006

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4007 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4062

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    + +VA G  H A +T+   +YTWG
Sbjct: 4063 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWG 4122

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 4123 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4166


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 196/367 (53%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT-KQGE 264
           WG G  +G LG G+           D L P  + +    ++ ++ CGA H    +  + E
Sbjct: 32  WGRG-EDGQLGHGDAE---------DRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTE 81

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  P+ I+ L G+ +  +ACG+ H  AVT  G++ +WG   
Sbjct: 82  VYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWG--R 139

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +GI +  ++ G  HTA VT  G LF +G G +G LG
Sbjct: 140 NQNGQLGLGTTEDSLVPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLG 198

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P++V ++ G +   V+CG  HT +V              +S G L+T+G  
Sbjct: 199 LGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--------------SSLGGLYTYGWS 244

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHGD E RL P  +  L  +NI Q++ G   ++ALTT G +Y  G   +GQ+G  
Sbjct: 245 KYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAG 304

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P ++     +  ++ ++CG  H  A+T    V++WG+G NGQLGHG+  +RN+
Sbjct: 305 DNIDHCSPIQIKFPQDQKVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNT 363

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 364 PMILEAL 370



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 22/343 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72

Query: 309 CA--VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
            A  V R+ ++Y+WG G +  G LGHG+      P+ +   L G+ +  I+CG  H   V
Sbjct: 73  TAYSVART-EVYSWGWGDF--GRLGHGNSSDLLTPKPIKA-LHGLKIRQIACGDSHCLAV 128

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G + ++G    G LG G    + +P++++   G+    V+ G  HTAAV        
Sbjct: 129 TMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV-------- 180

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 T  G+LF WG G  G LG GD+  RL P+ V+ +  + +  VACG   ++++++
Sbjct: 181 ------TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 487 SGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            G +YT G + YGQLG     D LVP R++    ++ + +++ G  H  ALT+  K+Y W
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDGKLYGW 293

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G    GQ+G GD  +  SP  + F +D++V ++ CG   T  +
Sbjct: 294 GWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 336



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 160/301 (53%), Gaps = 27/301 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D L PK +++   L +  IACG  H + VT 
Sbjct: 81  EVYSWGWGDFG--------RLGHGNS--SDLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+++++VA G  HT AVT  G+L+ WG
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWG 190

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P+KVS ++DG  +  ++CG  HT  V+S G L+T+G   +G
Sbjct: 191 WGRY--GNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     +P  +E LRG   +++S G  HT A+              T+ GKL+ W
Sbjct: 248 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMAL--------------TTDGKLYGW 293

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G GD      P  +    D+ + Q++CG   ++A+T   +V++ G    GQL
Sbjct: 294 GWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQL 353

Query: 502 G 502
           G
Sbjct: 354 G 354



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 15/232 (6%)

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           +IS G  H+  + S   + ++G G  G LGHGD      P ++  L G     V+CG  H
Sbjct: 12  FISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           T A  VA               ++++WG GD GRLGHG+    L P+ +  L    I Q+
Sbjct: 72  TTAYSVART-------------EVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQI 118

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG    +A+T  G V + G    GQLG+    D LVP ++      S ++ VA GA H 
Sbjct: 119 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGIS-IKMVAAGAEHT 177

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           AA+T   +++ WG G  G LG GD+++R  P  V  +   ++  V CG   T
Sbjct: 178 AAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHT 229



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D   P  ++      V  I+CG RH + VT +  +FSWG  + G+LGHG   D + P ++
Sbjct: 308 DHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 367

Query: 291 EILS 294
           E LS
Sbjct: 368 EALS 371


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 208/393 (52%), Gaps = 33/393 (8%)

Query: 230  TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQ 288
            T+  +P   E+  AL+V  +A G++    VT +G++++ GE + GRLG G  +  V  P+
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPR 2741

Query: 289  LIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
             +  LS   V+ VA   G  H  A+T  G +++WG+G  + G LGH S+++C  PR +  
Sbjct: 2742 QVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA 2799

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L    +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+ V+ L G R  
Sbjct: 2800 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 2858

Query: 407  RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            +V+CG    A  +  TD            G +F+WGDGD G+LG G  E    P+ +  L
Sbjct: 2859 QVACGS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNVPQNIERL 2906

Query: 467  IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESF 522
              + +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +  
Sbjct: 2907 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKI 2963

Query: 523  VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
            V  VA GA H  A+T   +VY WG   +GQ G+G       PTLV  L+ +++ RV CG 
Sbjct: 2964 VH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGS 3022

Query: 583  NFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
            + +       W ++VD +   S H P  F+  R
Sbjct: 3023 SHSV-----AW-TTVDMAT-PSVHEPVLFQTAR 3048



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 175/345 (50%), Gaps = 33/345 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           L V  IAC  +  +++++ G +++              +D   PQL++ L+  N+  +A 
Sbjct: 452 LGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAA 501

Query: 304 GE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLDGIHLSYISC 358
               +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   G H+ +I+C
Sbjct: 502 HSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+CG       
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG------- 612

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                S  + P   T  G++++WGDGD G+LG G  +    P+ +  L D ++ +V CG 
Sbjct: 613 -----SGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 667

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             SVALT  G VY+ G     +LG    + +   ++   +    V +VA G+ H  ALT 
Sbjct: 668 QFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTE 727

Query: 539 TSKVYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCG 581
            S+V++WG   N Q  H D     +  P+L+  L  K +  + CG
Sbjct: 728 DSEVHSWGN--NDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACG 770



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2715 GKVYACGEA-TNGRLGLGMSSGTVPIPRQVTALSSYVVKKVA---VHS---GGRHATALT 2767

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2768 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2827

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2828 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2884

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2885 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2930

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 2931 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2990

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 2991 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3031



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 143/280 (51%), Gaps = 25/280 (8%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           Y+ +  +D L P+ V+   + ++  IA      H + +   GE++SWG   GGRLGHG  
Sbjct: 474 YTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 282 ADVSHPQLIEILSGV----NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
             +  P++I   SG     +V  +ACG  ++ A+T  G+LYTWG G Y  G LGHGS   
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY--GRLGHGSSED 591

Query: 338 CWIPRKVSGNLDGIHLSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
             IP  V+G L G+ +  ++CG        VT  G ++++GDG +G LG G       P+
Sbjct: 592 EAIPMLVAG-LKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
            +E L+ L   +V CG   + A+              T  G++++WG GD  RLGHG +E
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSVAL--------------TKDGQVYSWGKGDNQRLGHGTEE 696

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
              +P+ +  L  + +  VA G    +ALT    V++ G+
Sbjct: 697 HVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 176/384 (45%), Gaps = 37/384 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3631 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3680

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V +  VA   G  H  A++  G++Y
Sbjct: 3681 ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 3740

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR V  +L G  +  I+ G  H+A VTSAG L+T+G G
Sbjct: 3741 SWGEA--EDGKLGHGNRSPCDRPRVVE-SLRGTEVVDIAAGGAHSACVTSAGDLYTWGKG 3797

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 3845

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +      C  P+      +V      S    +   +   G   Y
Sbjct: 3846 WSWGDGDYGKLGRGGSD-----GCKVPMKVPLSLRVG---RPSTPPPSWPRLDVGGKGDY 3897

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3898 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGT 3956

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ ++V RV CG
Sbjct: 3957 TNAIQRPRLVAALQGRKVNRVACG 3980



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 166/342 (48%), Gaps = 44/342 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   + L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKCYANVIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQ--- 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG      +A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           G +++   P L++ L+ K+V  V  G    L  T    +H W
Sbjct: 693 GTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSW 734



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 145/317 (45%), Gaps = 30/317 (9%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P+++E 
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  +A G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3767 LRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3823

Query: 353  LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P +V     LR  R   
Sbjct: 3824 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPL--SLRVGR--- 3878

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
                          S+  PS      +L   G GD  RLGHG  +    P  V  L  + 
Sbjct: 3879 -------------PSTPPPSWP----RLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3921

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3922 VIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGS 3981

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 3982 AHTLAW-STSKPASAGK 3997



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 45/314 (14%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+    AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQPLAVTDNGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENIC 472
           A+              T   ++ +WG+ D+ +    L     EP L P     L  ++I 
Sbjct: 724 AL--------------TEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPG----LDTKHIV 765

Query: 473 QVACGHDLSVALTT 486
            +ACG   S A ++
Sbjct: 766 GIACGPAQSFAWSS 779



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 109/251 (43%), Gaps = 25/251 (9%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R +   VV  ++ G+      S GD++ WG+G           R+G+S S 
Sbjct: 3759 DRPRVVESLRGT--EVVDIAAGGAHSACVTSAGDLYTWGKGRYG--------RLGHSDSE 3808

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 3809 --DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 3866

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  + +   V         +    V   GD +  G          HGS      PR+V G
Sbjct: 3867 PMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLG----------HGSDDHVRRPRQVQG 3916

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 3917 -LQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVN 3975

Query: 407  RVSCGVWHTAA 417
            RV+CG  HT A
Sbjct: 3976 RVACGSAHTLA 3986



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 89/198 (44%), Gaps = 17/198 (8%)

Query: 387  DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
            D     +P   ETL  L   +V+ G     AV V               GK++  G+   
Sbjct: 2680 DCTEIKVPSFSETLSALNVVQVAGGSKSLFAVTVE--------------GKVYACGEATN 2725

Query: 447  GRLGHGDKEPRL-FPECVAPLIDENICQVAC--GHDLSVALTTSGHVYTMGSAAYGQLGV 503
            GRLG G     +  P  V  L    + +VA   G   + ALT  G V++ G    G+LG 
Sbjct: 2726 GRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH 2785

Query: 504  PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
                     R+   +    + ++ACG+ H AALTS+ ++YTWG G  G+LGHGD   +  
Sbjct: 2786 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2845

Query: 564  PTLVDFLKDKQVKRVVCG 581
            P +V  L   +V +V CG
Sbjct: 2846 PKMVKVLLGHRVIQVACG 2863



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3630 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3679

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3680 ----TADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS 3735

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +  + V ++A G  H A +TS   +YTWG
Sbjct: 3736 EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWG 3795

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 3796 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 3839


>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
 gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
          Length = 1066

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 188/635 (29%), Positives = 277/635 (43%), Gaps = 110/635 (17%)

Query: 2   LIWYS-GKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYND------RSLDL 54
           L W   G   + +++  V ++I G+ T  F+   +P    Q  SL+Y +      RSLDL
Sbjct: 53  LEWVGKGARVKAVRMGLVLQVIAGRETPAFKSSKQPSPPDQCLSLMYREGVGKKPRSLDL 112

Query: 55  ICKDKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI 114
           +C+D  +A +W +GL A+  RG       G    + SSD                   D+
Sbjct: 113 VCEDAGQARMWRLGLDAVRERGG-----AGVTAEAFSSDDE-----------------DV 150

Query: 115 QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAA 174
                P+ +   + +   F   +    AA+   +  S            P    ++    
Sbjct: 151 VPASSPVRDAKLDEMAADFGVAMKVNSAASKFMKLKS------------PRGGAEQGDVG 198

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGE------------GIANGFLGGGEHRV 222
              R   SS +S               ++F+WG             G  +   G     V
Sbjct: 199 RGRRSLRSSAISDPR------------ELFLWGRMPSEFEPPPIDVGDPDAAAG-----V 241

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-RE 281
           G +     +  +P        LDV  +A GARHAV V +   +++WG+ +GGRLG G  +
Sbjct: 242 GPAVGGWREWSVPARAPGADGLDVVAVALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQ 301

Query: 282 ADVSHPQLIEILSGVNV----------ELVACGEYHTCAVTRS-GDLYTWGDGTYN-SGL 329
                P  + ++SG  V            V+CG  +T AV    G  Y WGD +    G 
Sbjct: 302 RGRGRPSKLSVVSGGEVSDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCHGA 361

Query: 330 LGHGSK-----VSCWIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           LG  S          +P KVS G   G  +S +SCG +H A VT+AG LF +G+G+F AL
Sbjct: 362 LGMASPSKGIVAGVSLPTKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFHAL 421

Query: 384 GH-GDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           GH GD  +   PR V  L   G R + VSCGV+HTAAV +       + +G    G+L+T
Sbjct: 422 GHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAI-----DRTTTGCAGRGELWT 476

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPL----IDEN--ICQVACGHDLSVALTTSGHVYTMG 494
           WGD D G+LGHG  E       VAP     +DEN  +  V+CG   ++A    G V+  G
Sbjct: 477 WGDADGGKLGHG-AEAAKEKAVVAPRRVSGLDENADVTTVSCGQWHTLAACADGVVWVCG 535

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL-TSTSKVYTWGKGANGQL 553
           S   G++  P    L P RV G       E +A G +H  A+     K+++WG+G  G L
Sbjct: 536 S--VGKV-APAEPALTPERVPG--IPGGAEAIASGEWHAVAIGRGGEKMFSWGRGRRGAL 590

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GH    + ++P  V+ L  ++V  V CG   TA +
Sbjct: 591 GHAGGRDEHAPRAVEALAGRRVHHVACGPESTAAV 625



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 107/240 (44%), Gaps = 42/240 (17%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST--MALDVHNIACGARHAVL 258
           GD+F WGEG    F     H +G+   + T    P+ V         V N++CG  H   
Sbjct: 408 GDLFCWGEGA---F-----HALGHDGDKST-CQHPRRVRGLWDAGRRVSNVSCGVYHTAA 458

Query: 259 VT---------KQGEIFSWGEESGGRLGHGREAD----VSHPQLIEIL-SGVNVELVACG 304
           V           +GE+++WG+  GG+LGHG EA     V  P+ +  L    +V  V+CG
Sbjct: 459 VAIDRTTTGCAGRGELWTWGDADGGKLGHGAEAAKEKAVVAPRRVSGLDENADVTTVSCG 518

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS----CWIPRKVSGNLDGIHLSYISCGL 360
           ++HT A    G ++          + G   KV+       P +V G   G     I+ G 
Sbjct: 519 QWHTLAACADGVVW----------VCGSVGKVAPAEPALTPERVPGIPGGAE--AIASGE 566

Query: 361 WHTAVVTSAGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           WH   +   G  +F++G G  GALGH        PR VE L G R   V+CG   TAAVV
Sbjct: 567 WHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACGPESTAAVV 626



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 39/226 (17%)

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
           S+P       GL    V+ G  H  AVV                  ++TWGDG  GRLG 
Sbjct: 252 SVPARAPGADGLDVVAVALGARHAVAVVRHQG--------------VYTWGDGAGGRLGR 297

Query: 452 G-DKEPRLFPECVAPLID----------ENICQVACGHDLSVALTTS-GHVYTMGSAA-- 497
           G D+  R  P  ++ +            E I +V+CG   +VA+    G  Y  G A+  
Sbjct: 298 GVDQRGRGRPSKLSVVSGGEVSDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGG 357

Query: 498 -YGQLGVP------VADGLVPTRVD-GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            +G LG+       VA   +PT+V  G    + V  V+CGA+H AA+T+   ++ WG+GA
Sbjct: 358 CHGALGMASPSKGIVAGVSLPTKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGA 417

Query: 550 NGQLGH-GDKDNRNSPTLVDFLKD--KQVKRVVCGLNFTAIICLHK 592
              LGH GDK     P  V  L D  ++V  V CG+  TA + + +
Sbjct: 418 FHALGHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAIDR 463


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 200/396 (50%), Gaps = 42/396 (10%)

Query: 195  EDFDSLG--DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
            ED+   G  DV++WG G      G G           T+  LP             + CG
Sbjct: 3673 EDWQEGGKSDVYLWGNGRYGQLAGTG-----------TNLTLPTLAPCLS--QTQQVVCG 3719

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTC 309
               + L+   G + + GE   GRLG G   D+  P +I    G V  +LV +CG + H+ 
Sbjct: 3720 QNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSM 3779

Query: 310  AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            A+T +G++++WGDG +  G LGHG+      P+++   L G  +  ++CG  H+AVVT+ 
Sbjct: 3780 ALTETGEVFSWGDGDF--GKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTAD 3836

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            G LFTFG G  G LG     +   P  V  L G    +VSCG+ HT  +V++ D  +   
Sbjct: 3837 GKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHT--LVLSLDGMA--- 3891

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                    ++ +GDGD G+LG G    + +P+ V  L ++ + +V CG   SV L T GH
Sbjct: 3892 --------VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGH 3943

Query: 490  VYTMGSAAYGQLGVPVADGLVPTRVDGEIAES----FVEEVACGAYHVAALTSTSKVYTW 545
            VYT G      +G+P  D ++  R + ++  S    F+E++A G  HV AL+ST  +Y W
Sbjct: 3944 VYTFGQERL--IGLP--DSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAW 3999

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  + GQLG G  +    PTL+  L+ K +K++  G
Sbjct: 4000 GCNSEGQLGLGHCNLVKEPTLITALQGKNIKQISAG 4035



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 197/429 (45%), Gaps = 40/429 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V++WG   ++    G   ++          LLPK  +     D   I  G      V+  
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI----------LLPKLTQGFS--DAQTIEAGQYCTFSVSTD 387

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYT 319
           G + + G+ S GRLG G   + S P+ + +    N++ V      + HT A+T  G++++
Sbjct: 388 GSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFS 447

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+  +   P+ V G L    +   S G  H+A VT+ G L+T+G+G 
Sbjct: 448 WGDGEY--GKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGD 505

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           FG LGH D  S + P  V+ + G+   +V+CG  HT A  VA D  +           ++
Sbjct: 506 FGRLGHSDSQSRNTPTLVKDISGV--GQVACGSSHTIA--VAQDGRT-----------MW 550

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           ++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G V+  G  +  
Sbjct: 551 SFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCL 610

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             G      L P  V+ +++ + + +++CG  H  AL+  ++VY WG    GQ G G   
Sbjct: 611 GCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669

Query: 560 NR-NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHN- 617
                P  V  L+   ++++  G + +       W +        + H PF    +    
Sbjct: 670 TPITRPKKVLGLEGVSIQQITAGTSHSL-----AWTAVPTDRQLVAWHRPFCVDLEESTF 724

Query: 618 CYNCGLVFC 626
            Y C  + C
Sbjct: 725 TYLCNFLKC 733



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI--ACGAR-HAV 257
            G V   GEG   G LG G            D  +P  + +     V  +  +CG+  H++
Sbjct: 3730 GAVMAVGEG-QYGRLGQG---------NSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSM 3779

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
             +T+ GE+FSWG+   G+LGHG       P+ IE L G +V  +ACG  H+  VT  G L
Sbjct: 3780 ALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKL 3839

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LFTFG 376
            +T+G G   SG LG  S  +   P +V+  L+G H+  +SCGL HT V++  G  ++ FG
Sbjct: 3840 FTFGSG--ESGRLGQRSTSNKMQPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFG 3896

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG +G LG G   +   P++VE L      +V CG     +VV+ATD            G
Sbjct: 3897 DGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGA--QFSVVLATD------------G 3942

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
             ++T+G      L     + R  P+ V  L    I  +A G +  +AL+++G +Y  G  
Sbjct: 3943 HVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCN 4002

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            + GQLG+   + +    +   +    +++++ G  H +A T+ S
Sbjct: 4003 SEGQLGLGHCNLVKEPTLITALQGKNIKQISAGRCHSSAWTAPS 4046



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG+G Y   L G G+ ++  +P  ++  L       + CG   + ++ S G +   
Sbjct: 3682 DVYLWGNGRYGQ-LAGTGTNLT--LP-TLAPCLS--QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+G +G LG G+     +P  +   +G   T++  SCG   H+ A+              
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMAL-------------- 3781

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ E +  P+ +  L  E++ Q+ACG   S  +T  G ++T
Sbjct: 3782 TETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFT 3841

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGAN 550
             GS   G+LG    ++ + P RV   +    V +V+CG  H   L+     V+ +G G  
Sbjct: 3842 FGSGESGRLGQRSTSNKMQPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDY 3900

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G    +  P  V+ L +K +K+V CG  F+ ++
Sbjct: 3901 GKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVL 3938



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 130/287 (45%), Gaps = 31/287 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+VF WG+G   G LG G              L  K V S  A        G RH+  VT
Sbjct: 443 GEVFSWGDG-EYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA--------GYRHSAAVT 493

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             GE+++WGE   GRLGH      + P L++ +SGV    VACG  HT AV + G    W
Sbjct: 494 NDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQ--VACGSSHTIAVAQDGR-TMW 550

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             G  ++G LGHG     + P+ +   L G  +  +  G   +  +TSAG +F +G GS 
Sbjct: 551 SFGGGDNGKLGHGDTNRVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS- 608

Query: 381 GALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             LG G   +TS+ PR VE L   +   +SCG  H  A+              +   +++
Sbjct: 609 -CLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLAL--------------SHENEVY 653

Query: 440 TWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALT 485
            WG+   G+ G G    P   P+ V  L   +I Q+  G   S+A T
Sbjct: 654 AWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWT 700



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 22/223 (9%)

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++ +G+G +G L  G   + ++P     L   +T +V CG     + ++ ++        
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLS--QTQQVVCG--QNCSFLIQSN-------- 3729

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV--ACGHD-LSVALTTSG 488
                G +   G+G  GRLG G+ +    P  ++      + Q+  +CG D  S+ALT +G
Sbjct: 3730 ----GAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3785

Query: 489  HVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
             V++ G   +G+LG    +    P +++    E  V+ +ACG  H A +T+  K++T+G 
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQ-LACGFRHSAVVTADGKLFTFGS 3844

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            G +G+LG     N+  P  V  L+   V +V CGLN T ++ L
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL 3887


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 196/385 (50%), Gaps = 36/385 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV++WG G           R G       + ++P    S        + CG     ++  
Sbjct: 153 DVYLWGAG-----------RHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQA 199

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV-ELV-ACG-EYHTCAVTRSGDLY 318
            G + + GE S GRLG G   D+    +I  L G  V +LV +CG + H+ A+T SG+++
Sbjct: 200 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 259

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 260 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 316

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 317 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 363

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 364 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 423

Query: 499 GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
             +G+P        R      +A   +E+VA GA H  AL ST  VY WG  + GQLG G
Sbjct: 424 --IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 481

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++   PTLV  L+ K ++++  G
Sbjct: 482 HTNHVREPTLVTVLQGKNIRQISAG 506



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 19/291 (6%)

Query: 250 ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 242 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 301

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +  ++CGL HT  V++
Sbjct: 302 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 358

Query: 369 AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 359 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 409

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G ++T+G      L  G       P+ +  L    I  VA G + ++AL ++
Sbjct: 410 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST 464

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           G VY  GS + GQLG+   + +    +   +    + +++ G  H AA T+
Sbjct: 465 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 515



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 30/329 (9%)

Query: 264 EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 153 DVYLWG---AGRHGQLAEAGRNVMVPATAPSFS--QAQQVICGQNCTFVIQANGTVLACG 207

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
           +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 208 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 264

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 265 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 310

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
           FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 311 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 370

Query: 498 YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 371 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 429

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
              N N P  +  L    ++ V  G   T
Sbjct: 430 RARNHNRPQQIPVLAGVVIEDVAVGAEHT 458



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 159/335 (47%), Gaps = 31/335 (9%)

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           SA + F ++   V S  S G +    +S G+VF WG+G   G LG G         RQ  
Sbjct: 229 SALQGFVVT-QLVTSCGSDGHSMALTES-GEVFSWGDG-DYGKLGHGNS------DRQRR 279

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
              P+ +E+    +V  ++CG +H+ +VT  G++F++G    GRLG G  ++   P+ + 
Sbjct: 280 ---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVT 336

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDL-YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L G  +  VACG  HT AV+  G + + +GDG Y  G LG G+  +   P+KV   L G
Sbjct: 337 ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY--GKLGLGNSTAKSSPQKVD-VLCG 393

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           I +  ++CG   +  +T  GH++TFG      L  G   + + P+++  L G+    V+ 
Sbjct: 394 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV 453

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HT A+               S G ++ WG   +G+LG G       P  V  L  +N
Sbjct: 454 GAEHTLAL--------------ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 499

Query: 471 ICQVACGHDLSVALTTSG-HVYTMGSAAYGQLGVP 504
           I Q++ G   S A T         G +   QLG+P
Sbjct: 500 IRQISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLP 534



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 153 DVYLWGAGRH--GQLAEAGR-NVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLAC 206

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVWHTAAVVVATDSSSSSPSGST 433
           G+GS+G LG G+     +   +  L+G   T++  SCG             S       T
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-------------SDGHSMALT 253

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T 
Sbjct: 254 ESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 313

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGKGAN 550
           G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G G  
Sbjct: 314 GNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 371

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 372 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 409


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/334 (36%), Positives = 180/334 (53%), Gaps = 24/334 (7%)

Query: 243 ALDVHNIA----CGARHAVLVT-KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
             DV  IA    CGA H    + +Q +++SWG    GRLGHG  +DV HPQ IE L G+ 
Sbjct: 68  GFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIK 127

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           ++ +ACG+ H  AVT +G +++WG     +G LG G+     +P+K+    +G+ +  I+
Sbjct: 128 IKQIACGDSHCLAVTDAGQVHSWG--RNQNGQLGLGNTEDSLLPQKIHA-FEGVCVKMIA 184

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  HTA +   G L+ +G G +G LG GD     +P +V ++ G +   V+CG  HT  
Sbjct: 185 AGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVT 244

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           V              +S G L+T+G    G+LGHGD E  L P  +  L D  I Q+A G
Sbjct: 245 V--------------SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGG 290

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
              ++A+   G +Y  G   +GQ+GV    D   P +V     E  V +VACG  H  AL
Sbjct: 291 WRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFP-DEQKVAQVACGWRHTLAL 349

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           T    V++WG+G +GQLGHG+  +RN+P ++D L
Sbjct: 350 TENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDAL 383



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 187/368 (50%), Gaps = 31/368 (8%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P+A E T+AL    ++ GA H+V +     + SWG    G+LGHG   D   P L 
Sbjct: 11  DEEVPEAPEQTVAL----VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTL- 65

Query: 291 EILSGVNV----ELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             LSG +V     +V CG  HT A +     LY+WG G +  G LGHG+    + P+ + 
Sbjct: 66  --LSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDF--GRLGHGNSSDVFHPQPIE 121

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L GI +  I+CG  H   VT AG + ++G    G LG G+   + +P+++    G+  
Sbjct: 122 A-LQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCV 180

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             ++ G  HTAA++                G L+ WG G  G LG GD+  RL PE V+ 
Sbjct: 181 KMIAAGAEHTAAIL--------------EDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSS 226

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVE 524
           +  E +  VACG   +V +++SG +YT G + YGQLG     D LVP +++  + + F+ 
Sbjct: 227 VEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFIS 285

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           ++A G  H  A+    K+Y WG    GQ+G  D  +  SP  V F  +++V +V CG   
Sbjct: 286 QIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRH 345

Query: 585 TAIICLHK 592
           T  +  +K
Sbjct: 346 TLALTENK 353



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 163/321 (50%), Gaps = 29/321 (9%)

Query: 182 SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V+  + H +A+ D      ++ WG G           R+G+  S  +D   P+ +E+ 
Sbjct: 76  SVVICGADHTTAYSDEQM--QLYSWGWGDFG--------RLGHGNS--SDVFHPQPIEAL 123

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
             + +  IACG  H + VT  G++ SWG    G+LG G   D   PQ I    GV V+++
Sbjct: 124 QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMI 183

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A G  HT A+   GDLY WG G Y  G LG G +    +P KVS +++G  +  ++CG  
Sbjct: 184 AAGAEHTAAILEDGDLYGWGWGQY--GNLGLGDRNDRLVPEKVS-SVEGEKMVLVACGWR 240

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           HT  V+S+G L+T+G   +G LGHGD     +P ++E L+    ++++ G  HT A  VA
Sbjct: 241 HTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMA--VA 298

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
            D            GKL+ WG    G++G  D      P  V    ++ + QVACG   +
Sbjct: 299 GD------------GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHT 346

Query: 482 VALTTSGHVYTMGSAAYGQLG 502
           +ALT + +V++ G    GQLG
Sbjct: 347 LALTENKNVFSWGRGTSGQLG 367



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  +ACG RH + +T+   +FSWG  + G+LGHG   D + P++I+ LS
Sbjct: 336 VAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALS 384


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 204/387 (52%), Gaps = 33/387 (8%)

Query: 189 SHGSAHEDFDSLGDVFI-WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES--TMALD 245
           S G++H      G+V   WG G  +G LG G+           D L+P  +      A  
Sbjct: 28  SAGASHSVALLAGNVLCSWGRG-EDGQLGHGDAE---------DRLVPTVLSGFDAAAPG 77

Query: 246 VHNIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           + ++ CGA H    ++ + +++SWG    GRLGHG  +DV  PQ ++ L G+ ++ +ACG
Sbjct: 78  ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H  AVT +G++ +WG     +G LG G+     +P+K+  + +G+ +  I+ G  HTA
Sbjct: 138 DSHCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQ-SFEGVCVKMIAAGAEHTA 194

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            VT  G L+ +G G +G LG GD     +P +V ++ G +   ++CG  HT  V      
Sbjct: 195 AVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITV------ 248

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   +S G L+T+G    G+LGHGD E  L P  +  L D +I Q++ G   ++AL
Sbjct: 249 --------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMAL 300

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T+ G +Y  G   +GQ+GV    D   P +V     +  V +VACG  H  A T    V+
Sbjct: 301 TSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFP-EDQKVAQVACGWRHTLAFTEKKNVF 359

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFL 570
           +WG+G +GQLGHG+  +RN P ++D L
Sbjct: 360 SWGRGTSGQLGHGEIVDRNKPVMIDAL 386



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 169/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ + +    V+ WG G           R+G+  S  +D   P+ V++
Sbjct: 78  ITSVICGADHTTAYSEDEQ--QVYSWGWGDFG--------RLGHGNS--SDVFTPQPVKA 125

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  IACG  H + VT  GE+ SWG    G+LG G   D   PQ I+   GV V++
Sbjct: 126 LQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKM 185

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT  GDLY WG G Y  G LG G +    +P KVS +++G  +  I+CG 
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRLVPEKVS-SVEGEKMVLIACGW 242

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G L+T+G   +G LGHGD     +P ++E L+    +++S G  HT A+  
Sbjct: 243 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMAL-- 300

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G GD +   FP  V    D+ + QVACG   
Sbjct: 301 ------------TSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRH 348

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A T   +V++ G    GQLG
Sbjct: 349 TLAFTEKKNVFSWGRGTSGQLG 370



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 178/344 (51%), Gaps = 28/344 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN-----VELVAC 303
           ++ GA H+V +     + SWG    G+LGHG   D   P    +LSG +     +  V C
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPT---VLSGFDAAAPGITSVIC 83

Query: 304 GEYHTCAVTR-SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           G  HT A +     +Y+WG G +  G LGHG+    + P+ V   L GI +  I+CG  H
Sbjct: 84  GADHTTAYSEDEQQVYSWGWGDF--GRLGHGNSSDVFTPQPVKA-LQGIKIKQIACGDSH 140

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
              VT AG + ++G    G LG G    + +P+++++  G+    ++ G  HTAAV    
Sbjct: 141 CLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAV---- 196

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G L+ WG G  G LG GD+  RL PE V+ +  E +  +ACG   ++
Sbjct: 197 ----------TEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTI 246

Query: 483 ALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            +++SG +YT G + YGQLG     D LVP +++  + +S + +++ G  H  ALTS  K
Sbjct: 247 TVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTSDGK 305

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +Y WG    GQ+G GD D+   P  V F +D++V +V CG   T
Sbjct: 306 LYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHT 349



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 25/240 (10%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR--TTRVSCGVW 413
           +S G  H+  + +   L ++G G  G LGHGD     +P  +          T V CG  
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HT A              S    ++++WG GD GRLGHG+      P+ V  L    I Q
Sbjct: 87  HTTAY-------------SEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQ 133

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESF----VEEVAC 528
           +ACG    +A+T +G V + G    GQLG+    D L+P ++     +SF    V+ +A 
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKI-----QSFEGVCVKMIAA 188

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GA H AA+T    +Y WG G  G LG GD+++R  P  V  ++ +++  + CG   T  +
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITV 248



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D   P  V+      V  +ACG RH +  T++  +FSWG  + G+LGHG   D + P +I
Sbjct: 324 DHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMI 383

Query: 291 EILS 294
           + LS
Sbjct: 384 DALS 387


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G +++V  P+LI  L
Sbjct: 3282 LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFL 3341

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ +A   G  H  A+T+ G +++WG+G    G LGHG+ VS   PR +  +L   
Sbjct: 3342 SQYMIKKMAVHSGGKHALALTQDGKIFSWGEG--EDGKLGHGNSVSLDKPRLIE-SLKSK 3398

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD  +   P+ V++L G R  +V+CG
Sbjct: 3399 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3458

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + +  D            G +++WGDGD G+LG G  +    P  +  L    +
Sbjct: 3459 SRDAQTMALTAD------------GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3506

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             Q+ CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  V  VA G
Sbjct: 3507 VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKVV-HVAVG 3564

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L D +V RV CG
Sbjct: 3565 ALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3616



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 187/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +  G +  
Sbjct: 4288 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPVLCESLSALRPVQLTGGEQTL 4337

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
            + VT  G++++ G  + GRLG G    V  P L+E +  V V+ VA   G  H  A++  
Sbjct: 4338 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4397

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++    P+ +   L G  +  I+CG  H+A +TSAG L+T
Sbjct: 4398 GHVYSWGEG--DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4454

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4455 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4505

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG +YT G
Sbjct: 4506 ---VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWG 4562

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A T   +V+TWG    GQLG
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4623 DGTTSALQRPRLVHALQGKKITRVACG 4649



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 170/329 (51%), Gaps = 23/329 (6%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  G+GT
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3320

Query: 325  YNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
              +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G  G L
Sbjct: 3321 --NGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            GHG+ +S   PR +E+L+  R   ++CG  H+AA+              TS G+L+TWG 
Sbjct: 3379 GHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAI--------------TSSGELYTWGL 3424

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQL 501
            G+ GRLGHGD   ++ P+ V  L+ + + QVACG     ++ALT  G VY+ G   +G+L
Sbjct: 3425 GEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKL 3484

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G   +DG     +   +    V ++ CGA    ALT   +V+TWGKG   +LGHG+  + 
Sbjct: 3485 GRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              PTLV+ L+ K+V  V  G    A+ CL
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVG----ALHCL 3569



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 161/333 (48%), Gaps = 25/333 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S     ++P  +ES   + V  +A   G +H + ++ +G 
Sbjct: 4344 GKVYATGYGAAGRLGIGGTDS----VMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 4399

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+LIE L G  +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4460 Y--GRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4516

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      IP ++E+L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4517 LGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL--------------TRSGAIYTWG 4562

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA T  G V+T G    GQLG
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
                  L   R+   +    +  VACG+ H  A
Sbjct: 4623 DGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4655



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 169/348 (48%), Gaps = 31/348 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+          ++   PK +       +  +A   G +HA+ 
Sbjct: 3311 GKLYACGEG-TNGRLGLGD---------DSNVCEPKLIPFLSQYMIKKMAVHSGGKHALA 3360

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G+IFSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LY
Sbjct: 3361 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3420

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V  +L G  +  ++CG     T  +T+ G ++++G
Sbjct: 3421 TWGLGEY--GRLGHGDTATQMKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3477

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  ++ L GL   ++ CG   + A+              T  G
Sbjct: 3478 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL--------------TKYG 3523

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + +  VA G    +A+T +G VY  G  
Sbjct: 3524 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDN 3583

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             +GQ G           +  E+ ++ V  V+CG+ H  A   T +  T
Sbjct: 3584 DHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAT 3631



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 174/361 (48%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G ++         + +G E    +PQ +   S
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYGSET--QYPQRVYGFS 501

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              V ++A      H  A+T+   +Y+WG+G  + G LGHG +V    P+ V   +D  +
Sbjct: 502 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 558

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++I+CG  ++AV++S G L+T+G G++G LGHG+  +  IP  V  L G     V+CG 
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGS 618

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             +  + V            T+ G +F+WGDG+ G+LG G  +    P+ V  L+D N+ 
Sbjct: 619 GDSQTLCV------------TASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   +V   +    V+E+  G +H
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFH 726

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V ALT    VY WG+   GQ+          PTL   L  K +  + CGL  +   C   
Sbjct: 727 VLALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSA 786

Query: 593 W 593
           W
Sbjct: 787 W 787



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 29/304 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G +R+ Y          PK +E  +  
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHG-NRLMYDR--------PKLIEELLGT 4431

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+L+E L    V  VACG
Sbjct: 4432 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4491

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C IP K+  +L G+ +  + CG   
Sbjct: 4492 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKIPMKIE-SLAGLGVIKVECGSQF 4548

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4549 SVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4604

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 4605 ----------TDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654

Query: 483  ALTT 486
            A +T
Sbjct: 4655 AWST 4658



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 152/312 (48%), Gaps = 37/312 (11%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++++S S G+ +        V+ WG G   G LG G+ RV Y          PK VE+ +
Sbjct: 506 TMIASHSDGTHYLALTQDSSVYSWGNG-DGGRLGHGD-RVWYDE--------PKLVEALV 555

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             ++  IACG+ ++ +++  GE+++WG  + GRLGHG   +V  P L+  L+G  V  VA
Sbjct: 556 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVA 615

Query: 303 C--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           C  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I+++ + CG 
Sbjct: 616 CGSGDSQTLCVTASGIVFSWGDGNY--GKLGRGGCDGSKTPKIVDKLLD-INVAKVYCGG 672

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T+ G ++T+G G    LGHG+      P+ +E L   +   +  G +H  A+  
Sbjct: 673 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLAL-- 730

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVAC 476
                       T    ++ WG  D G+    LG    EP L P     L  +NI  +AC
Sbjct: 731 ------------TEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPT----LSGKNIIGLAC 774

Query: 477 GHDLSVALTTSG 488
           G   S A  TS 
Sbjct: 775 GLTQSFAWCTSA 786



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 123/251 (49%), Gaps = 15/251 (5%)

Query: 182  SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            + +V  +  G       S G ++ WG+G   G LG G+           D L PK VE+ 
Sbjct: 4431 TEIVDIACGGHHSAAITSAGWLYTWGKG-RYGRLGHGDSE---------DQLTPKLVEAL 4480

Query: 242  MALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                V ++ACG+  A  + VT    ++SWG+   G+LG G       P  IE L+G+ V 
Sbjct: 4481 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVI 4540

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKV+  L G  +  I+ G
Sbjct: 4541 KVECGSQFSVALTRSGAIYTWGKGDYHR--LGHGTDDHVRRPRKVAA-LQGKKIISIATG 4597

Query: 360  LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              H    T  G +FT+GD   G LG G   +   PR V  L+G + TRV+CG  HT A  
Sbjct: 4598 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4657

Query: 420  VATDSSSSSPS 430
                + S  P+
Sbjct: 4658 TMKATQSRMPA 4668



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 119/241 (49%), Gaps = 16/241 (6%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GS H     S G+++ WG G   G LG G+             + PK V+S +   V  +
Sbjct: 3406 GSGHSAAITSSGELYTWGLG-EYGRLGHGD---------TATQMKPKLVQSLVGQRVIQV 3455

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+R A  + +T  G ++SWG+   G+LG G       P LI+ L+G+ V  + CG   
Sbjct: 3456 ACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3515

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+T+ G+++TWG G Y    LGHG+      P  V G L G  + +++ G  H   VT
Sbjct: 3516 SLALTKYGEVWTWGKGDYFR--LGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVT 3572

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
              G ++ +GD   G  G+G  I    P  V  L   R  RVSCG  H+ A V+    +++
Sbjct: 3573 DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPATN 3632

Query: 428  S 428
            +
Sbjct: 3633 N 3633



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +   +  +L  +    ++ G      VT+ G 
Sbjct: 4291 SGAIYGWGHN--HRGQLGGLEGAKVKLPV---LCESLSALRPVQLTGGEQTLLAVTADGK 4345

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 4346 VYATGYGAAGRLGIGGTDSVMVPTLLESIQ------------HVFVKKVAVNSGGKHCLA 4393

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 4394 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4453

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  + +  V +VACG+     L  T    V++WG G
Sbjct: 4454 TWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4512

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4513 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4552



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAV---------- 4340

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    + +VA   G    +AL++
Sbjct: 4341 ----TADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4396

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  E+  + + ++ACG +H AA+TS   +YTWG
Sbjct: 4397 EGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4456

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++ +P LV+ L+D +V  V CG      +C+
Sbjct: 4457 KGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4500



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+  G    +A+T  G VY  G 
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG+   D  +VPT ++  I   FV++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 4352 GAAGRLGIGGTDSVMVPTLLES-IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4410

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++   + P L++ L   ++  + CG + +A I    W+
Sbjct: 4411 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4452


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 2919

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 2920 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2979

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+ G  H+A +TS+G L+T+G 
Sbjct: 2980 FSWGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3036

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3037 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3084

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3085 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3144

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3145 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3200

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3201 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3253

Query: 614  KR 615
             R
Sbjct: 3254 AR 3255



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3864 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3913

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3914 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3973

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3974 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4030

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4078

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4079 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4138

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4139 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4197

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4198 TNAIQRPRLVAALQGKKVNRVACG 4221



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3999

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4000 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4056

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4057 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4116

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4117 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4162

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4163 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4222

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4223 AHTLAW-STSKPASAGK 4238



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 163/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 2922 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 2974

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LI+ L    +  +A G  H+  +T SG+LYTW
Sbjct: 2975 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTW 3034

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3035 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3091

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3092 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3137

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3138 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3197

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3198 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3238



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 335 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 386

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 387 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 436

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 437 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 482

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 483 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 542

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 543 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 602

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSS 596
           G +++   P L++ L+ K+V  V  G     ++     +H W S+
Sbjct: 603 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 127/252 (50%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3992 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4040

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4041 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4098

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4099 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4156

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4157 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4215

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 4216 NRVACGSAHTLA 4227



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 45/311 (14%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 409 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 459

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 460 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 516

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 517 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 573

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 574 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTH-- 631

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENIC 472
            +V+  DS            ++ +WG  D+ +    LG    EP  FP     L  ++I 
Sbjct: 632 CLVLTEDS------------EVHSWGSNDQCQHFDTLGVTKPEPTAFPG----LDSKHIV 675

Query: 473 QVACGHDLSVA 483
            +ACG   S A
Sbjct: 676 GIACGPAQSFA 686



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3863 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3917

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3918 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3965

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3966 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4025

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4026 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4084

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4085 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4124



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2861 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 2918

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 2919 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2964

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++A G+ H A 
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3024

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3025 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3070



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3912

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3913 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3968

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3969 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4028

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4029 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4072


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 217/422 (51%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G+++S GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+ G  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T + +VY WG   +GQ 
Sbjct: 3235 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQ 3290

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 3343

Query: 614  KR 615
             R
Sbjct: 3344 AR 3345



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3954 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 4064 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 4168

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4229 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACG 4311



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4146

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4207 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4312

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4313 AHTLAW-STSKPASAGK 4328



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 163/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYSCGEA-TNGRLGLGMSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LI+ L    +  +A G  H+  +T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 3227

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 3288 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  VAC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS +L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDMLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSS 596
           G +++   P L++ L+ K+V  V  G     ++     +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 4082 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4130

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4131 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4188

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4246

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4247 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4306 NRVACGSAHTLA------WSTSKPA---SAGKL 4329



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 45/311 (14%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 549

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 550 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTH-- 721

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENIC 472
            +V+  DS            ++ +WG  D+ +    LG    EP  FP     L  ++I 
Sbjct: 722 CLVLTEDS------------EVHSWGSNDQCQHFDTLGVTKPEPTAFPG----LDSKHIV 765

Query: 473 QVACGHDLSVA 483
            +ACG   S A
Sbjct: 766 GIACGPAQSFA 776



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 4007

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4055

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  +    V ++ACG+       LT    V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4174

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4175 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 19/226 (8%)

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            GL  TA + +   +F +G      LG        +P   ETL  L   +V+ G     AV
Sbjct: 2951 GLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC- 476
             V               GK+++ G+   GRLG G     +  P  +  L    + +VA  
Sbjct: 3009 TVE--------------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 477  -GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             G   + ALT  G V++ G    G+LG          R+   +    + ++A G+ H A 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3114

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            LTS+ ++YTWG G  G+LGHGD   +  P +V  L   +V +V CG
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4002

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4003 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4058

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 206/389 (52%), Gaps = 33/389 (8%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEI 292
            +P   E+  AL+V  +A G++    VT +G++++ GE + GRLG G  +  V  P+ +  
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346

Query: 293  LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            LS   V+ VA   G  H  A+T  G +++WG+G  + G LGH S+++C  PR +   L  
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 1403

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
              +  I+CG  H+A +TS+G L+T+G G +G LGHGD  +   P+ V+ L G R  +V+C
Sbjct: 1404 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G    A  +  TD            G +F+WGDGD G+LG G  E    P+ +  L  + 
Sbjct: 1464 GS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 1511

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEV 526
            +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +  V  V
Sbjct: 1512 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVH-V 1567

Query: 527  ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            A GA H  A+T + +VY WG   +GQ G+G       PTLV  L+ +++ RV CG + + 
Sbjct: 1568 AVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1627

Query: 587  IICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
                  W ++VD +   S H P  F+  R
Sbjct: 1628 -----AW-TTVDVAT-PSVHEPVLFQTAR 1649



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 2260 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 2309

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHGS+  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 2370 SWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 2427 RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDT------------V 2474

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT +G VYT G   Y
Sbjct: 2475 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDY 2534

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 2535 HRLGHGSDDHVRRPRQVQGLQGKKAI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 2593

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 2594 TNAIQRPRLVAALQGKKVNRVACG 2617



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 1316 GKVYACGEA-TNGRLGLGLSSGTVPLPRQVTALSSYVVKKVA---VHS---GGRHATALT 1368

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 1369 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 1428

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 1429 GLGEY--GRLGHGDTTTQLKPKMVK-VLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDG 1485

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 1486 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 1531

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 1532 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 1591

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 1592 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 1632



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 2336 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 2395

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 2396 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 2452

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   RV C
Sbjct: 2453 VVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVEC 2512

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 2513 GSQFSVAL--------------TKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2558

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
               +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 2559 AIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 2618

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 2619 AHTLAW-STSKPASAGK 2634



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 19/252 (7%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 2388 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 2436

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V  IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 2437 E--DQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 2494

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T++G +YTWG G Y+   LGHGS      PR+V 
Sbjct: 2495 VPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 2552

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G     I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 2553 G-LQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 2611

Query: 406  TRVSCGVWHTAA 417
             RV+CG  HT A
Sbjct: 2612 NRVACGSAHTLA 2623



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 2259 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTADGK 2313

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 2314 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 2361

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG + P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 2362 LSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2421

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V  +ACG+       LT    V++WG G
Sbjct: 2422 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVG-IACGSGDAQTLCLTDDDTVWSWGDG 2480

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V RV CG  F+  +
Sbjct: 2481 DYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVAL 2520



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 17/198 (8%)

Query: 387  DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
            D  +  +P   ETL  L   +V+ G     AV V               GK++  G+   
Sbjct: 1281 DLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVE--------------GKVYACGEATN 1326

Query: 447  GRLGHGDKEPRL-FPECVAPLIDENICQVAC--GHDLSVALTTSGHVYTMGSAAYGQLGV 503
            GRLG G     +  P  V  L    + +VA   G   + ALT  G V++ G    G+LG 
Sbjct: 1327 GRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH 1386

Query: 504  PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
                     R+   +    + ++ACG+ H AALTS+ ++YTWG G  G+LGHGD   +  
Sbjct: 1387 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLK 1446

Query: 564  PTLVDFLKDKQVKRVVCG 581
            P +V  L   +V +V CG
Sbjct: 1447 PKMVKVLLGHRVVQVACG 1464



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 2259 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV---------- 2308

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 2309 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 2364

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 2365 EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 2424

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 2425 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 207/412 (50%), Gaps = 29/412 (7%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
            VF+WG    +    GG          Q+D L       +    +H IA G++   +V+ +
Sbjct: 2057 VFVWGLNDKDQL--GGMKGSKVKLPVQSDFL-------SQLWPIH-IAGGSKSLFIVSHE 2106

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTW 320
            G++++ GE + GRLG G   +V +P+ I  LS   ++ VA   G  H  A+T  G +++W
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            G+G    G LGHG++++   P+ +   L    +  I+CG  H+A +TS+G L+T+G G +
Sbjct: 2167 GEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 381  GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            G LGHGD+I+   P+ +++L G R  +V+CG    A  +  TD            G +F+
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGS-RDAQTLALTDE-----------GWVFS 2271

Query: 441  WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
            WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y +
Sbjct: 2272 WGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFR 2331

Query: 501  LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            LG      +    V   + +  V  VA GA H  A+T T +VY WG   +GQ G+G    
Sbjct: 2332 LGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIV 2391

Query: 561  RNSPTLVDFLKDKQVKRVVCGLNFTAIICLH--KWVSSVDHSVCSSCHNPFG 610
               P LV  L+D  + RV CG + +    L   + VS V+  +     +P G
Sbjct: 2392 NRKPALVHGLEDVHINRVACGSSHSIAWTLQDTQVVSKVEPVIFPVAKDPLG 2443



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 169/344 (49%), Gaps = 37/344 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H     + R      P    S   +    +  G +HA+ +T
Sbjct: 2107 GKLYACGEG-TNGRLGLG-HSNNVPYPR------PIPFLSQYVIKKVAVHSGGKHAMALT 2158

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG   ++  P++IE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2159 LDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTW 2218

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG  ++   P+ +  +L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 2219 GLGEY--GRLGHGDNITQLKPKLIK-SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDG 2275

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP  +E L  L   ++ CG   + A+              T  G++
Sbjct: 2276 DFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL--------------TKTGEV 2321

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L D+ +  VA G    +A+T +G VY  G   +
Sbjct: 2322 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 2381

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALT 537
            GQ G    +G       P  V G + +  +  VACG+ H  A T
Sbjct: 2382 GQQG----NGTTIVNRKPALVHG-LEDVHINRVACGSSHSIAWT 2420



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 185/383 (48%), Gaps = 27/383 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3031 GTIYGWGHN-HRGQLGGIE---------GAKVKIPTPCEALSTLRPVQLVGGEQTLFAVT 3080

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    V  P L+E +  V ++ +A   G  H  A++   D+Y
Sbjct: 3081 ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVY 3140

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G  + G LGHG++++C  P+ +   L G  +  I+CG  H+A +TS G L+T+G G
Sbjct: 3141 SWGEG--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKG 3197

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ +E L G +   V+CG      + +  D +            +
Sbjct: 3198 RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN------------V 3245

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P+ +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3246 WSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDY 3305

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    + +   +    +    +  +A G+ H  A +   +V+TWG    GQLG    
Sbjct: 3306 HRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTT 3365

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
            +    P LV  L+ K++  V CG
Sbjct: 3366 NAIQRPRLVSALQGKKITNVACG 3388



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 156/313 (49%), Gaps = 21/313 (6%)

Query: 232  ALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
             L+P  +ES   + +  IA   G +H + ++   +++SWGE   G+LGHG       P+L
Sbjct: 3104 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKL 3163

Query: 290  IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
            IE L G  +  +ACG  H+ A+T +G LYTWG G Y  G LGHG       P+ +   L 
Sbjct: 3164 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY--GRLGHGDSEDQLKPKLIE-ELV 3220

Query: 350  GIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
            G  +  ++CG     T  +T   +++++GDG +G LG G      +P+++E+L GL   +
Sbjct: 3221 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIK 3280

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            V CG   + A+              T  G ++TWG GD  RLGHG  E    P+ VA L 
Sbjct: 3281 VECGSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQ 3326

Query: 468  DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
             + I  +A G    VA +  G V+T G    GQLG    + +   R+   +    +  VA
Sbjct: 3327 GKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVA 3386

Query: 528  CGAYHVAALTSTS 540
            CG+ H  A ++ +
Sbjct: 3387 CGSAHTLAWSTNN 3399



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 29/288 (10%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV+ WGEG  +G LG G      +         PK +E+    ++ +IACG  H+  +T 
Sbjct: 3138 DVYSWGEG-DDGKLGHGNRLACET---------PKLIEALQGYEIIDIACGGAHSAAITS 3187

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
             G++++WG+   GRLGHG   D   P+LIE L G  V  VAC  G+  T  +T   ++++
Sbjct: 3188 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWS 3247

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            WGDG Y  G LG G    C +P+K+  +L G+ +  + CG   +  +T +G ++T+G G 
Sbjct: 3248 WGDGDY--GKLGRGGSDGCKVPKKIE-SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 3304

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +  LGHG       P++V  L+G +   ++ G  H  A               +  G++F
Sbjct: 3305 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVAC--------------SDEGEVF 3350

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            TWGD D+G+LG         P  V+ L  + I  VACG   ++A +T+
Sbjct: 3351 TWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTN 3398



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3030 SGTIYGWGHN--HRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLF---AVTADGK 3084

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     +A +S       
Sbjct: 3085 VYATGYGAGGRLGIGGTDSVLVPTLLESIQ------------HVFIKKIAVNSGGKHCLA 3132

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             ++   +++WG+GD G+LGHG++     P+ +  L    I  +ACG   S A+T++G +Y
Sbjct: 3133 LSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLY 3192

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            T G   YG+LG   ++  +  ++  E+    V +VACG+       +T    V++WG G 
Sbjct: 3193 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 3252

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 3291



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 420  VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
            VA DS+   PS +  C ++F WG  DK +LG         P     L       +A G  
Sbjct: 2041 VAQDSTGE-PSSTVGC-RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSK 2098

Query: 480  LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALT 537
                ++  G +Y  G    G+LG+  ++ +   R    +++  +++VA   G  H  ALT
Sbjct: 2099 SLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALT 2158

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
               KV++WG+G +G+LGHG++ N + P +++ L+ K+++ + CG + +A I     L+ W
Sbjct: 2159 LDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTW 2218



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     IP   E L  LR  ++  G     AV          
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAV---------- 3079

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  L P  +  +    I ++A   G    +AL+ 
Sbjct: 3080 ----TADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA 3135

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
               VY+ G    G+LG          ++   +    + ++ACG  H AA+TST ++YTWG
Sbjct: 3136 DNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG 3195

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P L++ L   +V  V CG      +C+
Sbjct: 3196 KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/367 (37%), Positives = 193/367 (52%), Gaps = 25/367 (6%)

Query: 216  GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
            GGG H      +    +LL   V  + +     I CG     ++   G + + GE S GR
Sbjct: 3189 GGGRHG---QLAETGRSLLTPTVTPSFS-QAQQIICGQNCTFVIQANGTVQACGEGSYGR 3244

Query: 276  LGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
            LG G   D+    +I  L G V  +LV +CG + H+ A+T SG++++WGDG Y  G LGH
Sbjct: 3245 LGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY--GKLGH 3302

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            G+      PR++   L G  +  ++CG  H+AVV++ G LFTFG+G +G LG G+  +  
Sbjct: 3303 GNSDRQRRPRQIEA-LQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKK 3361

Query: 393  IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            IP  V  L G    +V CG+ HT AV         S  G+T    ++++GDGD G+LG G
Sbjct: 3362 IPERVTALEGQMVGQVGCGLNHTLAV---------SADGNT----VWSFGDGDYGKLGLG 3408

Query: 453  DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA-AYGQLGVPVADGLVP 511
            +   +  P+ V PL    + +V CG   SVALT  G V+T G     GQ      +   P
Sbjct: 3409 NSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRP 3468

Query: 512  TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             +V   +   FVE+V  GA H  ALTST +V+ WG   +GQLG GD + R  P LV  L+
Sbjct: 3469 QQVPA-LEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLVTALQ 3527

Query: 572  DKQVKRV 578
             K V++V
Sbjct: 3528 GKNVRQV 3534



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 45/340 (13%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  +  +ACG  H+
Sbjct: 3273 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHS 3332

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              V+  G L+T+G+G Y  G LG G+  +  IP +V+  L+G  +  + CGL HT  V++
Sbjct: 3333 AVVSADGKLFTFGNGDY--GRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSA 3389

Query: 369  AGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G+ +++FGDG +G LG G+  + S P+ V+ L G+   +V CG   + A+         
Sbjct: 3390 DGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL--------- 3440

Query: 428  SPSGSTSCGKLFTWGD----GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                 T  G++FT+G     G           P+  P   A  +++    V  G + S+A
Sbjct: 3441 -----TKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVED----VVVGAEHSLA 3491

Query: 484  LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            LT++G V+  GS   GQLG               I ++      C    V AL   +   
Sbjct: 3492 LTSTGEVWAWGSNGDGQLG---------------IGDTNARREPC---LVTALQGKNVRQ 3533

Query: 544  TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
             WG   +GQLG GD + R  P LV  L+ K V+++  G N
Sbjct: 3534 VWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAGRN 3573



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 20/238 (8%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV- 412
            I CG   T V+ + G +   G+GS+G LG G+         +  L+G   T++  SCG  
Sbjct: 3218 IICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSD 3277

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             H+ A+              T  G++F+WGDGD G+LGHG+ + +  P  +  L  E I 
Sbjct: 3278 GHSMAL--------------TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEII 3323

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAY 531
            Q+ACG   S  ++  G ++T G+  YG+LG+   ++  +P RV   +    V +V CG  
Sbjct: 3324 QMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLN 3382

Query: 532  HVAALTST-SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H  A+++  + V+++G G  G+LG G+   +++P  VD L    VK+V CG  F+  +
Sbjct: 3383 HTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 28/275 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    ++  +ACG +H+ +V+
Sbjct: 3287 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEIIQMACGFKHSAVVS 3336

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD-LYT 319
              G++F++G    GRLG G  ++   P+ +  L G  V  V CG  HT AV+  G+ +++
Sbjct: 3337 ADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWS 3396

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P++V   L GI +  + CG   +  +T  G +FTFG   
Sbjct: 3397 FGDGDY--GKLGLGNSTAKSTPQRVD-PLCGIGVKKVCCGTQFSVALTKDGRVFTFGQER 3453

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
                      + + P++V  L       V  G  H+ A+              TS G+++
Sbjct: 3454 LIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLAL--------------TSTGEVW 3499

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
             WG    G+LG GD   R  P  V  L  +N+ QV
Sbjct: 3500 AWGSNGDGQLGIGDTNARREPCLVTALQGKNVRQV 3534


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 196/386 (50%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       + L+P    S        + CG     ++  
Sbjct: 3983 DVFLWGAG-----------RHGQLAEAGRNILVPTLAPSFS--QAQQVVCGQNCTFVIQA 4029

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG--VNVELVACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G  V   + +CG + H+ A+T SG+++
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVF 4089

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LF+FG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  G T    +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV---------SADGMT----V 4193

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  G+VYT G    
Sbjct: 4194 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRL 4253

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +   F+E+VA GA H   L+ST  VY WG  + GQLG 
Sbjct: 4254 --IGLPEGRARNHNRPQQVPA-LTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGL 4310

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTL+  L+ K ++++  G
Sbjct: 4311 GHTNHVREPTLISALQGKNIQQISAG 4336



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 178/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVISS 415

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +       ++ V+     + HT A T  G+++
Sbjct: 416 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVF 475

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A V+  G L+T+G+G
Sbjct: 476 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 534 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 578

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 579 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 638

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + V +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 639 LGCGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 696



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 165/332 (49%), Gaps = 30/332 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            ++F WG    GR  HG+ A+     L+  L  S    + V CG+  T  +  +G +   G
Sbjct: 3983 DVFLWG---AGR--HGQLAEAGRNILVPTLAPSFSQAQQVVCGQNCTFVIQANGTVSACG 4037

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4038 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4140

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAA 497
            F++G+GD GRLG G+   +  PE V+ L    + QVACG + ++A++  G  V+  G   
Sbjct: 4141 FSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGD 4200

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4201 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG 4259

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               N N P  V  L    ++ V  G   T  +
Sbjct: 4260 RARNHNRPQQVPALTGVFIEDVAVGAEHTLTL 4291



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 19/291 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+++G+G Y  G LG G+  +  +P +VS  L+G  +  ++CGL HT  V++
Sbjct: 4132 AVVTSDGKLFSFGNGDY--GRLGLGNTSNKKLPERVSA-LEGHQVGQVACGLNHTLAVSA 4188

Query: 369  AGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G  ++ FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4189 DGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4239

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  VA G + ++ L+++
Sbjct: 4240 -----TKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSST 4294

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    +++++ G  H AA T+
Sbjct: 4295 GDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRCHSAAWTA 4345



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 31/336 (9%)

Query: 172  SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
            SA + F ++   V S  S G +    +S G+VF WG+G   G LG G         RQ  
Sbjct: 4059 SALQGFVVT-QMVTSCGSDGHSMALTES-GEVFSWGDG-DYGKLGHGNS------DRQRR 4109

Query: 232  ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
               P+ +E+    +V  ++CG +H+ +VT  G++FS+G    GRLG G  ++   P+ + 
Sbjct: 4110 ---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVS 4166

Query: 292  ILSGVNVELVACGEYHTCAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             L G  V  VACG  HT AV+  G  ++ +GDG Y  G LG G+  +   P+KV   L G
Sbjct: 4167 ALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDY--GKLGLGNSTAKSSPQKVD-VLCG 4223

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            I +  ++CG   +  +T  G+++TFG      L  G   + + P++V  L G+    V+ 
Sbjct: 4224 IGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAV 4283

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G  HT  +              +S G ++ WG   +G+LG G       P  ++ L  +N
Sbjct: 4284 GAEHTLTL--------------SSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKN 4329

Query: 471  ICQVACGHDLSVALTTSG-HVYTMGSAAYGQLGVPV 505
            I Q++ G   S A T         GS+   QLG+PV
Sbjct: 4330 IQQISAGRCHSAAWTAPPVPPRAPGSSVPLQLGLPV 4365



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V++S G
Sbjct: 363 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISSDG 417

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAF--------- 468

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                TS G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A++ 
Sbjct: 469 -----TSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 523

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 524 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 580

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +V+ L+   +++V  G    L  T+   ++ W
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 633



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 147/304 (48%), Gaps = 32/304 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VSSS     H   F S G+VF WG+G   G LG G      S +++   L+   ++  + 
Sbjct: 455 VSSSKGSDGHTLAFTSEGEVFSWGDG-DYGKLGHGN-----SSTQKYPKLIQGPLQGKV- 507

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V  ++ G RH+  V++ GE+++WGE   GRLGHG     + P L++ +S  NV  V+C
Sbjct: 508 --VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSC 563

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT A+++ G    W  G  ++G LGHG     + P+ V   L G+ +  +  G   +
Sbjct: 564 GSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSS 621

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             +TS G ++ +G G+   LG G   +T++ P+ +E L   R   +S G  H  A+    
Sbjct: 622 LALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL---- 675

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLS 481
                     +   +++ WG+   G+ G G+   P   P+ V  L    I Q++ G   S
Sbjct: 676 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 725

Query: 482 VALT 485
           +A T
Sbjct: 726 LAWT 729



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 556 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 606

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   V  
Sbjct: 607 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELATTRVVD 664

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KV G LDG+ +  IS G
Sbjct: 665 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVIG-LDGVAIQQISAG 721

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 722 TSHSLAWTA 730


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 207/412 (50%), Gaps = 29/412 (7%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
            VF+WG    +    GG          Q+D L       +    +H IA G++   +V+ +
Sbjct: 2896 VFVWGLNDKDQL--GGMKGSKVKLPVQSDFL-------SQLWPIH-IAGGSKSLFIVSHE 2945

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTW 320
            G++++ GE + GRLG G   +V +P+ I  LS   ++ VA   G  H  A+T  G +++W
Sbjct: 2946 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            G+G    G LGHG++++   P+ +   L    +  I+CG  H+A +TS+G L+T+G G +
Sbjct: 3006 GEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 381  GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            G LGHGD+I+   P+ +++L G R  +V+CG    A  +  TD            G +F+
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGS-RDAQTLALTDE-----------GWVFS 3110

Query: 441  WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
            WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y +
Sbjct: 3111 WGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFR 3170

Query: 501  LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            LG      +    V   + +  V  VA GA H  A+T T +VY WG   +GQ G+G    
Sbjct: 3171 LGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIV 3230

Query: 561  RNSPTLVDFLKDKQVKRVVCGLNFTAIICLH--KWVSSVDHSVCSSCHNPFG 610
               P LV  L+D  + RV CG + +    L   + VS V+  +     +P G
Sbjct: 3231 NRKPALVHGLEDVHINRVACGSSHSIAWTLQDTQVVSKVEPVIFPVAKDPLG 3282



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 169/344 (49%), Gaps = 37/344 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H     + R      P    S   +    +  G +HA+ +T
Sbjct: 2946 GKLYACGEG-TNGRLGLG-HSNNVPYPR------PIPFLSQYVIKKVAVHSGGKHAMALT 2997

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG   ++  P++IE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 2998 LDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTW 3057

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG  ++   P+ +  +L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3058 GLGEY--GRLGHGDNITQLKPKLIK-SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDG 3114

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     +IP  +E L  L   ++ CG   + A+              T  G++
Sbjct: 3115 DFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL--------------TKTGEV 3160

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L D+ +  VA G    +A+T +G VY  G   +
Sbjct: 3161 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3220

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALT 537
            GQ G    +G       P  V G + +  +  VACG+ H  A T
Sbjct: 3221 GQQG----NGTTIVNRKPALVHG-LEDVHINRVACGSSHSIAWT 3259



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 185/383 (48%), Gaps = 27/383 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3870 GTIYGWGHN-HRGQLGGIEG---------AKVKIPTPCEALSTLRPVQLVGGEQTLFAVT 3919

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    V  P L+E +  V ++ +A   G  H  A++   D+Y
Sbjct: 3920 ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVY 3979

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G  + G LGHG++++C  P+ +   L G  +  I+CG  H+A +TS G L+T+G G
Sbjct: 3980 SWGEG--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKG 4036

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ +E L G +   V+CG      + +  D +            +
Sbjct: 4037 RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN------------V 4084

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P+ +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4085 WSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDY 4144

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    + +   +    +    +  +A G+ H  A +   +V+TWG    GQLG    
Sbjct: 4145 HRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTT 4204

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
            +    P LV  L+ K++  V CG
Sbjct: 4205 NAIQRPRLVSALQGKKITNVACG 4227



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 156/313 (49%), Gaps = 21/313 (6%)

Query: 232  ALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
             L+P  +ES   + +  IA   G +H + ++   +++SWGE   G+LGHG       P+L
Sbjct: 3943 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKL 4002

Query: 290  IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
            IE L G  +  +ACG  H+ A+T +G LYTWG G Y  G LGHG       P+ +   L 
Sbjct: 4003 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY--GRLGHGDSEDQLKPKLIE-ELV 4059

Query: 350  GIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
            G  +  ++CG     T  +T   +++++GDG +G LG G      +P+++E+L GL   +
Sbjct: 4060 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIK 4119

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            V CG   + A+              T  G ++TWG GD  RLGHG  E    P+ VA L 
Sbjct: 4120 VECGSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQ 4165

Query: 468  DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
             + I  +A G    VA +  G V+T G    GQLG    + +   R+   +    +  VA
Sbjct: 4166 GKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVA 4225

Query: 528  CGAYHVAALTSTS 540
            CG+ H  A ++ +
Sbjct: 4226 CGSAHTLAWSTNN 4238



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 27/370 (7%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           F   G+   G+ +      + P+  ++   L +  I C  R  +++T+ G++F     S 
Sbjct: 441 FYYNGQRVFGWGWFSWIFGVGPQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSS- 499

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLG 331
                    D   PQ +  LSG+N+  +A      H  A+T+  ++Y+WG+G  + G LG
Sbjct: 500 ---------DTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLG 548

Query: 332 HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           HG   +   P  +   L G  +  + CG  ++A +++ G L+T+G G++G LGHG     
Sbjct: 549 HGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
             P  +  L      +V+CG ++   + +            TS GK+++WGDGD G+LG 
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCI------------TSQGKVYSWGDGDYGKLGR 655

Query: 452 GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
           G  +    P  +  L +  I QV CG   SVAL+  GHVYT G     +LG P  + +  
Sbjct: 656 GGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRF 715

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             +   + +  V  V+ G  HV ALT   +VY WGK  N Q+    +     P L++ LK
Sbjct: 716 PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALK 775

Query: 572 DKQVKRVVCG 581
            ++V  V CG
Sbjct: 776 GQKVVGVCCG 785



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 29/288 (10%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV+ WGEG  +G LG G      +         PK +E+    ++ +IACG  H+  +T 
Sbjct: 3977 DVYSWGEG-DDGKLGHGNRLACET---------PKLIEALQGYEIIDIACGGAHSAAITS 4026

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
             G++++WG+   GRLGHG   D   P+LIE L G  V  VAC  G+  T  +T   ++++
Sbjct: 4027 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWS 4086

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            WGDG Y  G LG G    C +P+K+  +L G+ +  + CG   +  +T +G ++T+G G 
Sbjct: 4087 WGDGDY--GKLGRGGSDGCKVPKKIE-SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4143

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +  LGHG       P++V  L+G +   ++ G  H  A               +  G++F
Sbjct: 4144 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVAC--------------SDEGEVF 4189

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            TWGD D+G+LG         P  V+ L  + I  VACG   ++A +T+
Sbjct: 4190 TWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTN 4237



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 166/326 (50%), Gaps = 35/326 (10%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           PQ  + LS + ++ + C +     +T++G ++           + + S   C  P++++G
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF----------FMYYSSDTQC--PQEMTG 509

Query: 347 NLDGIHLSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            L GI++  I+      H   +T    ++++G+G  G LGHGD  +   P  ++ L+G  
Sbjct: 510 -LSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKD 568

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              V CG  ++AA+              ++ G L+TWG G+ GRLGHG  E  L P  ++
Sbjct: 569 IIDVECGGTYSAAI--------------SANGALYTWGRGNYGRLGHGTAEDCLTPTMIS 614

Query: 465 PLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
            L DE+I +VACG  +  ++ +T+ G VY+ G   YG+LG   +DG    R+  ++    
Sbjct: 615 ALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVK 674

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           + +V CGA    AL+    VYTWGKG   +LGH  ++N   P +V+ L+D++V  V  G+
Sbjct: 675 IVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGV 734

Query: 583 NFTAIIC----LHKWVSSVDHSVCSS 604
           +    +     ++ W  + +  +C S
Sbjct: 735 SHVLALTDQGEVYGWGKNENKQICDS 760



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3869 SGTIYGWGHN--HRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLF---AVTADGK 3923

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     +A +S       
Sbjct: 3924 VYATGYGAGGRLGIGGTDSVLVPTLLESIQ------------HVFIKKIAVNSGGKHCLA 3971

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             ++   +++WG+GD G+LGHG++     P+ +  L    I  +ACG   S A+T++G +Y
Sbjct: 3972 LSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLY 4031

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            T G   YG+LG   ++  +  ++  E+    V +VACG+       +T    V++WG G 
Sbjct: 4032 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 4091

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 4130



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     IP   E L  LR  ++  G     AV          
Sbjct: 3869 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAV---------- 3918

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  L P  +  +    I ++A   G    +AL+ 
Sbjct: 3919 ----TADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA 3974

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
               VY+ G    G+LG          ++   +    + ++ACG  H AA+TST ++YTWG
Sbjct: 3975 DNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG 4034

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P L++ L   +V  V CG      +C+
Sbjct: 4035 KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G   G+      ++G+    + +   P+ VE      V  ++ G  H + +T
Sbjct: 692 GHVYTWGKG--EGW------KLGHP--TEENVRFPEMVEVLRDRKVVGVSLGVSHVLALT 741

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            QGE++ WG+    ++    E  V  P+LIE L G  V  V CG   + A T
Sbjct: 742 DQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWT 793


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 192/361 (53%), Gaps = 20/361 (5%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P  VE    L V  IACG+ H V++T+  +++SWG    GRLGH        P L+
Sbjct: 26  DQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLV 85

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             L+G +++ V CG YHT A++ +G L+TWG G Y  G LGHG++V    P +V   + G
Sbjct: 86  SALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMY--GKLGHGNEVGHPAPCRVEAFI-G 142

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVS 409
             +  I+CG  HTA + + G ++ +GD   G  G G+      +P+++E L+G++ T+++
Sbjct: 143 REVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIA 202

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
              +HTAA+              T  G L++WG+G  GRLG G+++ ++ P CV  L   
Sbjct: 203 ACGFHTAAI--------------TQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGV 248

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVAC 528
            + QVACG   S  +T  G V T G   +GQLG     +  VP  V   +  + + +V C
Sbjct: 249 RVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA-LEGAGIVQVTC 307

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  H   L+   KV+T+G G +G+LGHG       P LV+ L + +V +V      T  +
Sbjct: 308 GWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367

Query: 589 C 589
           C
Sbjct: 368 C 368



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           S +Y+WG+G +GQ G+G  +++  P  V+ LK   V ++ CG   T ++
Sbjct: 6   SMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVL 54


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 189/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G + +V  P+ I  L
Sbjct: 2984 LPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+ +S   P+ +   L   
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNNMSLDKPKLIE-TLKSK 3100

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A + S G L+T+G G +G LGHGD ++ + P+ V+TL G R  +V+CG
Sbjct: 3101 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACG 3160

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + + TD            G +++WGDGD G+LG G  +    P  V  L    +
Sbjct: 3161 SRDAQTMALTTD------------GCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV 3208

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             QV CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  V  VA G
Sbjct: 3209 VQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKIVH-VAVG 3266

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L+D +V RV CG
Sbjct: 3267 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCG 3318



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 191/387 (49%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +A G +  
Sbjct: 3939 WDGSGAIYGWGHN-HRGQLGGLE---------GPKVKLPAPCESLSALRPIQLAGGEQTL 3988

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G+++S G  + GRLG G    V  P L+E +  V ++ VA   G  H  A++  
Sbjct: 3989 FAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE 4048

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+K+S   P+ +  +L G+ +  I+CG  H+A +TSAG L+T
Sbjct: 4049 GHVYSWGEG--DDGKLGHGNKMSYDRPKLIE-DLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4156

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G
Sbjct: 4157 ---VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWG 4213

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A +   +V+TWG    GQLG
Sbjct: 4214 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G     + P LV  L+ K++ RV CG
Sbjct: 4274 DGTTSALHRPRLVHALQGKKITRVACG 4300



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 164/339 (48%), Gaps = 31/339 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+           +   PK +       +  +A   G +HA+ 
Sbjct: 3013 GKLYACGEG-TNGRLGLGD---------DNNVCEPKPIPFLSQFVIKKVAVHSGGKHALA 3062

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+  +G+LY
Sbjct: 3063 LTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELY 3122

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG  V+   P+ V   L G  +  ++CG     T  +T+ G ++++G
Sbjct: 3123 TWGLGEY--GRLGHGDTVTQARPKLVQ-TLVGHRVVQVACGSRDAQTMALTTDGCVYSWG 3179

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  VE L GL   +V CG   + A+              T  G
Sbjct: 3180 DGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLAL--------------TKYG 3225

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + I  VA G    +A+T +G VY  G  
Sbjct: 3226 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3285

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             +GQ G           +  E+ ++ V  V+CG+ H  A
Sbjct: 3286 DHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 171/333 (51%), Gaps = 23/333 (6%)

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            ++  ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3018

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G 
Sbjct: 3019 GEGT--NGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3076

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+++S   P+ +ETL+  R   ++CG  H+AA+               S G+L+
Sbjct: 3077 DGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAI--------------ASNGELY 3122

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +  P+ V  L+   + QVACG     ++ALTT G VY+ G   
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGD 3182

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +G+LG   +DG     V   +    V +V CGA    ALT   +V+TWGKG   +LGHG+
Sbjct: 3183 FGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3242

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              +   PTLV+ L+ K++  V  G    A+ CL
Sbjct: 3243 DHHVRKPTLVEGLRGKKIVHVAVG----ALHCL 3271



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 165/336 (49%), Gaps = 25/336 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  + G+   G   +G + S     ++P  +ES   + +  +A   G +H + ++ +G 
Sbjct: 3995 GKVYSTGYGAAGRLGIGGTDS----VMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGH 4050

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG +     P+LIE L GV +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGR 4110

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4111 Y--GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4167

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      +P ++++L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4168 LGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL--------------TRSGAVYTWG 4213

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA +  G V+T G    GQLG
Sbjct: 4214 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
                  L   R+   +    +  VACG+ H  A ++
Sbjct: 4274 DGTTSALHRPRLVHALQGKKITRVACGSAHTLAWST 4309



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 178/362 (49%), Gaps = 29/362 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G +++        + HG E    +PQ +   S
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHGSET--QYPQRVHGFS 505

Query: 295 GVNVELVAC---GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
              V ++A    G++H  A+T+ G +Y+WG+G  + G LGHG  VS   P+ +   L+  
Sbjct: 506 DKLVTMIASHSDGKHH-LALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPKLIEALLEK- 561

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
           ++ +I+CG  ++A ++ +G L+T+G G++G LGHG+     IP  V TL+G     V+CG
Sbjct: 562 NIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACG 621

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                       S  S     T+ G +F+WGDGD G+LG G  +    P+ V  L+D N+
Sbjct: 622 ------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            +V CG   S ALT  G VYT G     +LG    + +   ++   + +  +++++ GA 
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGAT 729

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           H+  LT    VY WG+   GQ+        + PTL   L  K V  +  G   +   C+ 
Sbjct: 730 HILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASGPTQSFAWCMS 789

Query: 592 KW 593
            W
Sbjct: 790 AW 791



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ SS G       S G V+ WGEG  +G LG G      S+ R      PK +E  + +
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEG-DDGKLGHGNK---MSYDR------PKLIEDLLGV 4082

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+++E L    V  VAC 
Sbjct: 4083 EIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4142

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4143 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPLKID-SLAGLGVIKVECGSQF 4199

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4200 SVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4255

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      +  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 4256 ----------SDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 4305

Query: 483  ALTTS 487
            A +T+
Sbjct: 4306 AWSTA 4310



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 173/335 (51%), Gaps = 39/335 (11%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG   G + G+G     S P   + ++ + ++ + C E     ++ +G++Y     
Sbjct: 441 EVLAWG---GVKFGNG-----STPFYCDAIAELGIKQLCCTERALMILSLNGNVYN---- 488

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGI--HLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                 + HGS+     P++V G  D +   ++  S G  H A+ T  G ++++G+G  G
Sbjct: 489 ------MYHGSETQ--YPQRVHGFSDKLVTMIASHSDGKHHLAL-TQDGCVYSWGNGDGG 539

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD +S   P+ +E L       ++CG  ++AA+ V+              G+L+TW
Sbjct: 540 RLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVS--------------GELYTW 585

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYG 499
           G G+ GRLGHG+ +  + P  V  L    +  VACG     ++ +T SG V++ G   YG
Sbjct: 586 GRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 645

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           +LG    DG    ++  ++ +  V +V CG+   AALT+  +VYTWGKG   +LGHG ++
Sbjct: 646 KLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEE 705

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           +   P +++ L+DK++K +  G     ++   ++V
Sbjct: 706 HVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFV 740



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 33/290 (11%)

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           F   L ++++S S G  H      G V+ WG G       GG  R+G+  +   D   PK
Sbjct: 504 FSDKLVTMIASHSDGKHHLALTQDGCVYSWGNG------DGG--RLGHGDTVSYDE--PK 553

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
            +E+ +  ++  IACG+ ++  ++  GE+++WG  + GRLGHG   DV  P L+  L G 
Sbjct: 554 LIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGH 613

Query: 297 NVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            V  VAC  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I++ 
Sbjct: 614 TVVHVACGSGDSQTLCVTASGIVFSWGDGDY--GKLGRGGTDGSKTPKIVDKLLD-INVV 670

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            + CG   +A +T+ G ++T+G G    LGHG       P+ +E+LR  +   +S G  H
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFP 460
              ++V T+              ++ WG  D G+    LG    EP L P
Sbjct: 731 ---ILVLTEDQF-----------VYGWGRNDYGQIDPTLGSVISEPTLCP 766



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    + +  +     H +A     S G ++ WG+G   G LG G+      
Sbjct: 4069 SYDRPKLIEDLLGVEIIDIACGGHHSAA---ITSAGWLYTWGKG-RYGRLGHGD------ 4118

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+     V ++ACG+  A  + VT    ++SWG+   G+LG G    
Sbjct: 4119 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4175

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  I+ L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      PRK
Sbjct: 4176 CKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHR--LGHGTDDHVRRPRK 4233

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    +  G +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 4234 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGK 4292

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            + TRV+CG  HT A   A  + S  P+ +
Sbjct: 4293 KITRVACGSAHTLAWSTAKATQSRMPAST 4321



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 134/320 (41%), Gaps = 92/320 (28%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WGEG  +G LG G +    S  +      PK +E+  +  + +IACG+ H+  + 
Sbjct: 3067 GKVFSWGEG-EDGKLGHGNN---MSLDK------PKLIETLKSKRIRDIACGSGHSAAIA 3116

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG    GRLGHG     + P+L++ L G  V  VACG  +  T A+T  G +Y
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG +  G LG G    C+ P  V   L+G+ +  + CG   +  +T  G ++T+G G
Sbjct: 3177 SWGDGDF--GKLGRGGSDGCYTPLVVE-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3233

Query: 379  SFGALGHGD-------------------HI------------------------------ 389
             +  LGHG+                   H+                              
Sbjct: 3234 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3293

Query: 390  STSI---PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
            +TS+   P  V  L   R  RVSCG  H+ A V+    SS                    
Sbjct: 3294 TTSVNRKPSLVHELEDARVNRVSCGSSHSIAWVLVDQPSS-------------------- 3333

Query: 447  GRLGHGDKEPRLFPECVAPL 466
                 G++EP  FP    PL
Sbjct: 3334 -----GNQEPVTFPTARDPL 3348



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G KV    P +    L  I L+     L+    VT+ G 
Sbjct: 3942 SGAIYGWGHN--HRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLF---AVTADGK 3996

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +++ G G+ G LG G   S  IP  +E+++            H     VA  S       
Sbjct: 3997 VYSTGYGAAGRLGIGGTDSVMIPTLLESIQ------------HVFIKKVAVSSGGKHCLA 4044

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG+K     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 4045 LSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLY 4104

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKGA 549
            T G   YG+LG   +D  +  +V   + +  V +VACG+     L  T    V++WG G 
Sbjct: 4105 TWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4164

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4165 YGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4203



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAV---------- 3991

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK+++ G G  GRLG G  +  + P  +  +    I +VA   G    +AL++
Sbjct: 3992 ----TADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSS 4047

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  ++    + ++ACG +H AA+TS   +YTWG
Sbjct: 4048 EGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG 4107

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD D++  P +V+ L+D +V  V CG      +C+
Sbjct: 4108 KGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 6/163 (3%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G ++ WG   +G+LG G + P++  P     L      Q+A G     A+T  G VY+ G
Sbjct: 3943 GAIYGWGHNHRGQLG-GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTG 4001

Query: 495  SAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANG 551
              A G+LG+   D  ++PT ++  I   F+++VA   G  H  AL+S   VY+WG+G +G
Sbjct: 4002 YGAAGRLGIGGTDSVMIPTLLE-SIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            +LGHG+K + + P L++ L   ++  + CG + +A I    W+
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWL 4103


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 207/406 (50%), Gaps = 29/406 (7%)

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
           + D  +  E    S+  + + +SH  A     S G V  WG G  +G LG G+     + 
Sbjct: 8   AGDDEAVPEAPERSVVLISAGASHSVA---LLSGGVVCSWGRG-EDGQLGHGD-----AE 58

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVT-KQGEIFSWGEESGGRLGHGREADVS 285
            R    +L  A +         + CGA H    + ++ +++SWG    GRLGHG  +DV 
Sbjct: 59  DRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVF 118

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           +PQ I+ L GV +  +ACG+ H  AVT +G +++WG     +G LG G+     +P+K+ 
Sbjct: 119 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQ 176

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
              +G+ +  I+ G  HTA VT  G L+ +G G +G LG GD     IP +V ++ G + 
Sbjct: 177 A-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKM 235

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+CG  HT  V              +S G ++T+G    G+LGHGD E  L P  +  
Sbjct: 236 VLVACGWRHTITV--------------SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA 281

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVE 524
           L D  I Q++ G   ++AL   G +Y  G   +GQ+GV    D   P +V+    E  V 
Sbjct: 282 LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP-NEQKVV 340

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           +VACG  H  ALT    V++WG+G +GQLGHG+  +RN P ++D L
Sbjct: 341 QVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 386



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 191/361 (52%), Gaps = 28/361 (7%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P+A E ++ L    I+ GA H+V +   G + SWG    G+LGHG   D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 291 ----EILSGVNVELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
               +   G    +V CG  HT A +     LY+WG G +  G LGHG+    + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDF--GRLGHGNSSDVFNPQPIQ 124

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L G+ ++ I+CG  H   VT AGH+ ++G    G LG G+   + +P++++   G+R 
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             ++ G  HTAAV              T  G L+ WG G  G LG GD++ RL PE V+ 
Sbjct: 184 KMIAAGAEHTAAV--------------TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSS 229

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVE 524
           +  + +  VACG   ++ +++SG +YT G + YGQLG     D LVP +++  + ++ + 
Sbjct: 230 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTIS 288

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           +++ G  H  AL +  K+Y WG    GQ+G GD ++  SP  V+F  +++V +V CG   
Sbjct: 289 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 348

Query: 585 T 585
           T
Sbjct: 349 T 349



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 181/361 (50%), Gaps = 40/361 (11%)

Query: 156 PSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFL 215
           P+ LT AF D     +S           V+  + H +A+ D +    ++ WG G      
Sbjct: 63  PTVLTAAFDDAPGGVASV----------VICGADHTTAYSDEEL--QLYSWGWGDFG--- 107

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
                R+G+  S  +D   P+ +++   + +  IACG  H + VT  G + SWG    G+
Sbjct: 108 -----RLGHGNS--SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
           LG G   D   PQ I+   GV V+++A G  HT AVT  GDLY WG G Y  G LG G +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDR 218

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
               IP KVS +++G  +  ++CG  HT  V+S+G ++T+G   +G LGHGD     +P 
Sbjct: 219 DDRLIPEKVS-SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH 277

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++E L+    +++S G  HT A  +A D            GKL+ WG    G++G GD E
Sbjct: 278 KLEALKDTTISQISGGWRHTMA--LAAD------------GKLYGWGWNKFGQVGVGDNE 323

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRV 514
               P  V    ++ + QVACG   ++ALT + +V++ G    GQLG   + D  +P  +
Sbjct: 324 DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 383

Query: 515 D 515
           D
Sbjct: 384 D 384



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 19/238 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV----ETLRGLRTTRVSCG 411
           IS G  H+  + S G + ++G G  G LGHGD     +P  +    +   G   + V CG
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             HT A              S    +L++WG GD GRLGHG+      P+ +  L    I
Sbjct: 85  ADHTTAY-------------SDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI 131

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGA 530
            Q+ACG    +A+T +GHV++ G    GQLG+    D L+P ++        V+ +A GA
Sbjct: 132 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGA 190

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H AA+T    +Y WG G  G LG GD+D+R  P  V  +  +++  V CG   T  +
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 248



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  +ACG RH + +T+   +FSWG  + G+LGHG   D + P++I+ LS
Sbjct: 339 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 201/396 (50%), Gaps = 42/396 (10%)

Query: 195  EDFDSLG--DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
            ED+   G  DV++WG G      G G           T+  +P    S        + CG
Sbjct: 3012 EDWQEGGKSDVYLWGNGRYGQLAGTG-----------TNLTVPTLAPSLS--QTQQVVCG 3058

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTC 309
               + L+   G + + GE   GRLG G   D+  P +I    G V  +LV +CG + H+ 
Sbjct: 3059 QNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSM 3118

Query: 310  AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            A+T +G++++WGDG +  G LGHG+      P+++   L G  +  ++CG  H+AVVT+ 
Sbjct: 3119 ALTETGEVFSWGDGDF--GKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTAD 3175

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            G LFTFG G  G LG     +  +P  V  L G    +VSCG+ HT  +V++ D  +   
Sbjct: 3176 GKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHT--LVLSLDGMA--- 3230

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                    ++ +GDGD G+LG G    + +P+ V  L ++ + +V CG   SV +   GH
Sbjct: 3231 --------VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGH 3282

Query: 490  VYTMGSAAYGQLGVPVADGLVPTRVDGEIAES----FVEEVACGAYHVAALTSTSKVYTW 545
            VYT G      +G+P  D ++  R + ++  S    F+E++A G  HV AL+ST  VY W
Sbjct: 3283 VYTFGQERL--IGLP--DSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAW 3338

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  + GQLG G  +    PTL+  L+ K +K++  G
Sbjct: 3339 GCNSEGQLGLGHCNPVKEPTLITALQGKNIKQISAG 3374



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 198/429 (46%), Gaps = 40/429 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V++WG   ++    G   ++          LLPK  +     D   I  G      V+  
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI----------LLPKLTQGFS--DAQTIEAGQYCTFSVSTD 430

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYT 319
           G + + G+ S GRLG G   + S P+ + +    N++ V+     + HT A+T  G++++
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFS 490

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+  +   P+ + G L    +   S G  H+A VT  G L+T+G+G 
Sbjct: 491 WGDGEY--GKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           FG LGH D  S ++P  V+ + G+   +V+CG  HT A  VA D  +           ++
Sbjct: 549 FGRLGHSDSQSRNMPTLVKDISGV--GQVACGSSHTIA--VAQDGRT-----------VW 593

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           ++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G V+  G  +  
Sbjct: 594 SFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCL 653

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             G      L P  V+ +++ + + +++CG  H  AL+  ++VY WG    GQ G G   
Sbjct: 654 GCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712

Query: 560 NR-NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHN- 617
                P  V  L+   ++++  G + +       W +        + H PF    +    
Sbjct: 713 TPITRPKKVLGLEGVSIQQITAGTSHSL-----AWTAVPTDRQLVAWHRPFCVDLEESTF 767

Query: 618 CYNCGLVFC 626
            Y C  + C
Sbjct: 768 TYLCNFLKC 776



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 176/359 (49%), Gaps = 31/359 (8%)

Query: 204  FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI--ACGAR-HAVLVT 260
             I   G+      G   R+G   S   D  +P  + +     V  +  +CG+  H++ +T
Sbjct: 3064 LIQSNGVVTAVGEGQYGRLGQGNS--DDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALT 3121

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            + GE+FSWG+   G+LGHG       P+ IE L G +V  +ACG  H+  VT  G L+T+
Sbjct: 3122 ETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTF 3181

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LFTFGDGS 379
            G G   SG LG  S  +  +P +V+  L+G H+  +SCGL HT V++  G  ++ FGDG 
Sbjct: 3182 GSG--ESGRLGQRSTSNKMLPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGD 3238

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +G LG G   +   P++VE L      +V CG     +VVVA D            G ++
Sbjct: 3239 YGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGA--QFSVVVACD------------GHVY 3284

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            T+G      L     + R  P+ V  L    I  +A G +  +AL+++G VY  G  + G
Sbjct: 3285 TFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEG 3344

Query: 500  QLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
            QLG+    PV +  + T + G+     +++++ G  H +A T+ S     G   N QLG
Sbjct: 3345 QLGLGHCNPVKEPTLITALQGK----NIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLG 3399



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 142/278 (51%), Gaps = 26/278 (9%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG+G Y   L G G+ ++  +P  ++ +L       + CG   + ++ S G +   
Sbjct: 3021 DVYLWGNGRYGQ-LAGTGTNLT--VP-TLAPSLS--QTQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+G +G LG G+     +P  +   +G   T++  SCG   H+ A+              
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMAL-------------- 3120

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ E +  P+ +  L  E++ Q+ACG   S  +T  G ++T
Sbjct: 3121 TETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFT 3180

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGAN 550
             GS   G+LG    ++ ++P RV   +    V +V+CG  H   L+     V+ +G G  
Sbjct: 3181 FGSGESGRLGQRSTSNKMLPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDY 3239

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G    +  P  V+ L +K +K+V CG  F+ ++
Sbjct: 3240 GKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVV 3277



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 22/223 (9%)

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++ +G+G +G L  G   + ++P    +L   +T +V CG     + ++ ++        
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLS--QTQQVVCG--QNCSFLIQSN-------- 3068

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV--ACGHD-LSVALTTSG 488
                G +   G+G  GRLG G+ +    P  ++      + Q+  +CG D  S+ALT +G
Sbjct: 3069 ----GVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124

Query: 489  HVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
             V++ G   +G+LG    +    P +++    E  V+ +ACG  H A +T+  K++T+G 
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQ-LACGFRHSAVVTADGKLFTFGS 3183

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            G +G+LG     N+  P  V  L+   V +V CGLN T ++ L
Sbjct: 3184 GESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSL 3226



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 86/226 (38%), Gaps = 60/226 (26%)

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDK-------------------------------- 446
           + ++ + ++SP        ++ WG                                    
Sbjct: 364 LCSSSTDAASPGTEGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEAGQYC 423

Query: 447 ------------------GRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHDLSVA 483
                             GRLG GD   +  P+ +      NI +V+      GH L  A
Sbjct: 424 TFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTL--A 481

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           +T  G V++ G   YG+LG    A    P  + G +    V   + G  H AA+T   ++
Sbjct: 482 ITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGEL 541

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           YTWG+G  G+LGH D  +RN PTLV  +    V +V CG + T  +
Sbjct: 542 YTWGEGDFGRLGHSDSQSRNMPTLVKDISG--VGQVACGSSHTIAV 585


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 214/422 (50%), Gaps = 47/422 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+   +A G++    VT
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNAVQVAGGSKSLFAVT 1843

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ +  LS   V+ VA   G  H  A+T  G +
Sbjct: 1844 VEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKV 1903

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+ +C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 1904 FSWGEG--DDGKLGHFSRXNCDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGL 1960

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 1961 GEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGS-RDAQTLALTDE-----------GL 2008

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2068

Query: 498  YGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG   +GQ 
Sbjct: 2069 YFRLGHGSDVHVRK---PQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQ 2124

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
            G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P  F+ 
Sbjct: 2125 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQT 2177

Query: 614  KR 615
             R
Sbjct: 2178 AR 2179



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG     G LGG E              +P   E+  AL    +  G +    VT
Sbjct: 2788 GTVYGWGHN-HRGQLGGVEG---------AKVKVPTPCEALAALRPAQLIGGEQTLFAVT 2837

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 2838 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2897

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 2898 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDT------------V 3002

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  V  L      +V CG   SVALT SG VYT G   Y
Sbjct: 3003 WSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDY 3062

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3063 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3121

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 3122 TNAIQRPRLVAALQGKKVNRVACG 3145



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 165/346 (47%), Gaps = 36/346 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 1846 GKVYACGEA-TNGRLGLGVSSGTVPVPRQVTALSSYVVKKVA---VHS---GGRHATALT 1898

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 1899 ADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTW 1958

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 1959 GLGEY--GRLGHGDNTTQLKPKMVK-VLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDG 2015

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 2016 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 2061

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T +G VY  G   +
Sbjct: 2062 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2121

Query: 499  GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTST 539
            GQ G    +G       PT V G +    +  VACG+ H  A T+ 
Sbjct: 2122 GQQG----NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2162



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 153/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2923

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +G LYTWG G Y  G LGH        P+ V   L G  
Sbjct: 2924 LRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 2980

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G      +P +V+ L GL   +V C
Sbjct: 2981 VVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVEC 3040

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3041 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3086

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3087 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 3146

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 3147 AHTLAW-STSKPASAGK 3162



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N  QVA G     A+T  G 
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGK 1847

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ V+ G VP  R    ++   V++VA   G  H  ALT+  KV++WG
Sbjct: 1848 VYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWG 1907

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK ++++ + CG + +A +     L+ W
Sbjct: 1908 EGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTW 1958



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  +  + +  G      VT+ G 
Sbjct: 2787 SGTVYGWGHN--HRGQLGGVEGAKVKVPTPCEA---LAALRPAQLIGGEQTLFAVTADGK 2841

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 2842 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 2889

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 2890 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLY 2949

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 2950 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTEDDTVWSWGDG 3008

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  VD L      +V CG  F+  +
Sbjct: 3009 DYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVAL 3048



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAV---------- 2836

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 2837 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 2892

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 2893 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWG 2952

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 2953 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 2996


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/395 (35%), Positives = 197/395 (49%), Gaps = 46/395 (11%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 4000 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4046

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4047 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4106

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4107 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163

Query: 379  SFGALGHGDHISTSIPREVETLRG----------LRTTRVSCGVWHTAAVVVATDSSSSS 428
             +G LG G+  +  +P  V  L G          L   +V+CG+ HT AV         S
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAV---------S 4214

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
              GS     ++ +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  G
Sbjct: 4215 ADGSM----VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4270

Query: 489  HVYTMGSAAYGQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            HVYT G      +G+P        R      +A   +E+VA GA H  AL ST  VY WG
Sbjct: 4271 HVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              + GQLG G  ++   PTLV  L+ K V+++  G
Sbjct: 4329 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4363



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 418

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 479 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 581

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 641

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 642 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 699



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 153/301 (50%), Gaps = 29/301 (9%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4089 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4148

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS----------YISC 358
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +            ++C
Sbjct: 4149 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTLFFLQVAC 4205

Query: 359  GLWHTAVVTSAGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            GL HT  V++ G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A
Sbjct: 4206 GLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVA 4265

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            +              T  G ++T+G      L  G       P+ +  L    I  VA G
Sbjct: 4266 L--------------TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVG 4311

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             + ++AL ++G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T
Sbjct: 4312 AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371

Query: 538  S 538
            +
Sbjct: 4372 A 4372



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 40/339 (11%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 4000 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4054

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4055 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4111

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4112 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4157

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI----------CQVACGHDLSVALTTSG 488
            FT+G+GD GRLG G+   +  PE V  L    I           QVACG + ++A++  G
Sbjct: 4158 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADG 4217

Query: 489  -HVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
              V+  G   YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G
Sbjct: 4218 SMVWAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFG 4276

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            +     L  G   N N P  +  L    ++ V  G   T
Sbjct: 4277 QDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4315



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 34/287 (11%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 4000 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4053

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4099

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4100 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4159

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDG----EIAES-----FVEEVACGAYHVAALTST-SK 541
             G+  YG+LG+   ++  +P RV      +I ++     F  +VACG  H  A+++  S 
Sbjct: 4160 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSM 4219

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            V+ +G G  G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4220 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 146/316 (46%), Gaps = 39/316 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4103 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4152

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE----------LVACGEYHTCA 310
              G++F++G    GRLG G  ++   P+ +  L G  +            VACG  HT A
Sbjct: 4153 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLA 4212

Query: 311  VTRSGDL-YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            V+  G + + +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  
Sbjct: 4213 VSADGSMVWAFGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKD 4269

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            GH++TFG      L  G   + + P+++  L G+    V+ G  HT A+           
Sbjct: 4270 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL----------- 4318

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG- 488
                S G ++ WG   +G+LG G       P  V  L  +N+ Q++ G   S A T    
Sbjct: 4319 ---ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4375

Query: 489  HVYTMGSAAYGQLGVP 504
                 G +   QLG+P
Sbjct: 4376 PPRAPGVSVPLQLGLP 4391



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 28/280 (10%)

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V++
Sbjct: 363 TPIVSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 417

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDS 424
           + G +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A       
Sbjct: 418 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF------ 471

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVA 483
                   T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A
Sbjct: 472 --------TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 523

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           +T  G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + 
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRT 580

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           V+++G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 620



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 437 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 492

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 493 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 547

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 548 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 603

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 604 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 661

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 662 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 707

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 708 KKVSGLDGIAIQQISAGTSHSLAWT 732



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++T
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVIST 418

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----G 477
           D S  +      CGK      G  GRLG GD   +   + +      +I +V+      G
Sbjct: 419 DGSVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 466

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           H L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+
Sbjct: 467 HTL--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 524

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           T   ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 525 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 571



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 559 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 609

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 610 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 667

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 668 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 724

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 725 TSHSLAWTA 733


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 207/406 (50%), Gaps = 29/406 (7%)

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
           + D  +  E    S+  + + +SH  A     S G V  WG G  +G LG G+     + 
Sbjct: 13  AGDDEAVPEAPERSVVLISAGASHSVA---LLSGGVVCSWGRG-EDGQLGHGD-----AE 63

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVT-KQGEIFSWGEESGGRLGHGREADVS 285
            R    +L  A +         + CGA H    + ++ +++SWG    GRLGHG  +DV 
Sbjct: 64  DRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVF 123

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           +PQ I+ L GV +  +ACG+ H  AVT +G +++WG     +G LG G+     +P+K+ 
Sbjct: 124 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQ 181

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
              +G+ +  I+ G  HTA VT  G L+ +G G +G LG GD     IP +V ++ G + 
Sbjct: 182 A-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKM 240

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+CG  HT  V              +S G ++T+G    G+LGHGD E  L P  +  
Sbjct: 241 VLVACGWRHTITV--------------SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA 286

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVE 524
           L D  I Q++ G   ++AL   G +Y  G   +GQ+GV    D   P +V+    E  V 
Sbjct: 287 LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP-NEQKVV 345

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           +VACG  H  ALT    V++WG+G +GQLGHG+  +RN P ++D L
Sbjct: 346 QVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 391



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 191/361 (52%), Gaps = 28/361 (7%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P+A E ++ L    I+ GA H+V +   G + SWG    G+LGHG   D   P ++
Sbjct: 16  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 71

Query: 291 ----EILSGVNVELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
               +   G    +V CG  HT A +     LY+WG G +  G LGHG+    + P+ + 
Sbjct: 72  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDF--GRLGHGNSSDVFNPQPIQ 129

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L G+ ++ I+CG  H   VT AGH+ ++G    G LG G+   + +P++++   G+R 
Sbjct: 130 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 188

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             ++ G  HTAAV              T  G L+ WG G  G LG GD++ RL PE V+ 
Sbjct: 189 KMIAAGAEHTAAV--------------TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSS 234

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVE 524
           +  + +  VACG   ++ +++SG +YT G + YGQLG     D LVP +++  + ++ + 
Sbjct: 235 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTIS 293

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           +++ G  H  AL +  K+Y WG    GQ+G GD ++  SP  V+F  +++V +V CG   
Sbjct: 294 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 353

Query: 585 T 585
           T
Sbjct: 354 T 354



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 181/361 (50%), Gaps = 40/361 (11%)

Query: 156 PSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFL 215
           P+ LT AF D     +S           V+  + H +A+ D +    ++ WG G      
Sbjct: 68  PTVLTAAFDDAPGGVASV----------VICGADHTTAYSDEEL--QLYSWGWGDFG--- 112

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
                R+G+  S  +D   P+ +++   + +  IACG  H + VT  G + SWG    G+
Sbjct: 113 -----RLGHGNS--SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 165

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
           LG G   D   PQ I+   GV V+++A G  HT AVT  GDLY WG G Y  G LG G +
Sbjct: 166 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDR 223

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
               IP KVS +++G  +  ++CG  HT  V+S+G ++T+G   +G LGHGD     +P 
Sbjct: 224 DDRLIPEKVS-SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH 282

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++E L+    +++S G  HT A  +A D            GKL+ WG    G++G GD E
Sbjct: 283 KLEALKDTTISQISGGWRHTMA--LAAD------------GKLYGWGWNKFGQVGVGDNE 328

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRV 514
               P  V    ++ + QVACG   ++ALT + +V++ G    GQLG   + D  +P  +
Sbjct: 329 DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 388

Query: 515 D 515
           D
Sbjct: 389 D 389



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 19/238 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV----ETLRGLRTTRVSCG 411
           IS G  H+  + S G + ++G G  G LGHGD     +P  +    +   G   + V CG
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             HT A              S    +L++WG GD GRLGHG+      P+ +  L    I
Sbjct: 90  ADHTTAY-------------SDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI 136

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGA 530
            Q+ACG    +A+T +GHV++ G    GQLG+    D L+P ++        V+ +A GA
Sbjct: 137 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGA 195

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H AA+T    +Y WG G  G LG GD+D+R  P  V  +  +++  V CG   T  +
Sbjct: 196 EHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 253



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  +ACG RH + +T+   +FSWG  + G+LGHG   D + P++I+ LS
Sbjct: 344 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 198/386 (51%), Gaps = 38/386 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       + L+P    S        + CG     ++  
Sbjct: 4073 DVFLWGAG-----------RHGQLAEAGRNILVPTIAPSFS--QAQQVVCGQNCTFVIQP 4119

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4179

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 4180 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P +V  L G    +V+CG+ HT  +VV+ D              +
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHT--LVVSADGM-----------MV 4283

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  G V+T G    
Sbjct: 4284 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRL 4343

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V G ++   +++VA GA H   L+ST  VYTWG  + GQLG 
Sbjct: 4344 --IGLPEGRARNHNRPQQVPG-LSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTLV  L+ K + ++  G
Sbjct: 4401 GHTNHVREPTLVTTLQGKNIHQISAG 4426



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 178/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKI----------LQPKLASSFA--DAQTIEAGQYCTFVISS 427

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +       ++ V+     + HT A T  G+++
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A V+  G L+T+G+G
Sbjct: 488 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 545

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 546 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 590

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 650

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + V +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 651 LGCGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 708



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 19/293 (6%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4162 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4221

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P KV+  L+G H+  ++CGL HT VV++
Sbjct: 4222 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSA 4278

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 4279 DGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 4329

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  GK+FT+G      L  G       P+ V  L   +I  VA G + ++ L+++
Sbjct: 4330 -----TKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSST 4384

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            G VYT GS + GQLG+   + +    +   +    + +++ G  H AA T+ S
Sbjct: 4385 GDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTAPS 4437



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 166/332 (50%), Gaps = 30/332 (9%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            ++F WG    GR  HG+ A+     L+  +  S    + V CG+  T  +  +G +   G
Sbjct: 4073 DVFLWG---AGR--HGQLAEAGRNILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACG 4127

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4128 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              T+ GKL
Sbjct: 4185 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TADGKL 4230

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L   ++ QVACG + ++ ++  G  V+  G   
Sbjct: 4231 FTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGD 4290

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT   KV+T+G+     L  G
Sbjct: 4291 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG 4349

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               N N P  V  L    ++ V  G   T ++
Sbjct: 4350 RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVL 4381



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 36/345 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4176 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4225

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G +V  VACG  HT  V+  G + + 
Sbjct: 4226 ADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWA 4285

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  G +FTFG   
Sbjct: 4286 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGKVFTFGQDR 4342

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    V+ G  HT  +              +S G ++
Sbjct: 4343 LIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVL--------------SSTGDVY 4388

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT-SGHVYTMGSAAY 498
            TWG   +G+LG G       P  V  L  +NI Q++ G   S A T  S      GS+  
Sbjct: 4389 TWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTAPSVPPRAPGSSVP 4448

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACG---AYHVAALTSTS 540
             QLG+P A   VP +  G + E  +E V       YH + L  +S
Sbjct: 4449 LQLGLPAA---VPPQYSG-LKELSIEAVRARLRLLYHFSDLMYSS 4489



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 28/280 (10%)

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  V+ + ++Y WG  +  S  L  G++     P+  S   D      I  G + T V++
Sbjct: 372 TPVVSETCEVYVWGSNS--SHQLVEGTQEKILQPKLASSFADA---QTIEAGQYCTFVIS 426

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDS 424
           S G +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A       
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAF------ 480

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVA 483
                   T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A
Sbjct: 481 --------TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 532

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           ++  G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + 
Sbjct: 533 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRT 589

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           V+++G G NG+LGHGD +    P +V+ L+   +++V  G
Sbjct: 590 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 629



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 32/304 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VSSS     H   F + G+VF WG+G   G LG G      S +++   L+   ++  + 
Sbjct: 467 VSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN-----SSTQKYPKLIQGPLQGKV- 519

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V  ++ G RH+  V++ GE+++WGE   GRLGHG     + P L++ +S  NV  V+C
Sbjct: 520 --VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSC 575

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT A+++ G    W  G  ++G LGHG     + P+ V   L G+ +  +  G   +
Sbjct: 576 GSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSS 633

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             +TS G ++ +G G+   LG G   +T++ P+ +E L   R   +S G  H  A+    
Sbjct: 634 LALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL---- 687

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLS 481
                     +   +++ WG+   G+ G G+   P   P+ V  L    I Q++ G   S
Sbjct: 688 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 737

Query: 482 VALT 485
           +A T
Sbjct: 738 LAWT 741



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 26/229 (11%)

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T VV+    ++ +G  S   L  G       P+   +    +T  +  G + T   V+++
Sbjct: 372 TPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQT--IEAGQYCT--FVISS 427

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----G 477
           D S  +      CGK      G  GRLG GD   +   + +       I +V+      G
Sbjct: 428 DGSVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDG 475

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           H L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+
Sbjct: 476 HTL--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 533

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +   ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 534 SEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 580



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 568 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 618

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   V  
Sbjct: 619 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELATTRVVD 676

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KV G LDG+ +  IS G
Sbjct: 677 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVIG-LDGVAIQQISAG 733

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 734 TSHSLAWTA 742


>gi|308808460|ref|XP_003081540.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116060005|emb|CAL56064.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 937

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 200/393 (50%), Gaps = 40/393 (10%)

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
           R T    P A+E    LDV  I+ GARH +  T+ G ++SWGE  GG+LG     D   P
Sbjct: 229 RWTRVDAPSAIEGMETLDVVEISIGARHTLARTRTGAVYSWGEGKGGKLGIPSGQDFDRP 288

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC-WIPRKV-- 344
             ++ L G  V L +CG  H+ AV   G+++ WGD     GLLG     S  W P K+  
Sbjct: 289 TRVD-LDGRAVAL-SCGSAHSVAVV-EGEVFAWGDPNAAPGLLGLSDVRSVMWFPGKILF 345

Query: 345 ---SGNLDG-----------IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
              +G L             + +  +SCG  HTA VT  G  +T+G+GSF ALGHGD  S
Sbjct: 346 PSATGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEGSFFALGHGDRES 405

Query: 391 TSIPREVETLRGLRTT--RVSCGVWHTAAVVVATDSS---SSSPSGSTSC-----GKLFT 440
           +  PR++ET    R    RVSCGVWHTAA+V A+ SS      P+   S      G+LFT
Sbjct: 406 SREPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELFT 465

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDE---NICQVACGHDLSVALTTSGHVYTMGSAA 497
           WGDG+ G+LG  D      P   +  + E    +C V+CG   +VALT+ G ++  G   
Sbjct: 466 WGDGETGQLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCGQHHTVALTSQGDLWLAG--C 523

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G++   +         D E     V  VA G  HV A T  ++V++WG G NG+LG G 
Sbjct: 524 VGKVDNSLRTTTFTRLTDFETGS--VRTVASGENHVVASTRDARVFSWGVGKNGRLGLG- 580

Query: 558 KDNRNSPTLVDF--LKDKQVKRVVCGLNFTAII 588
           +++R+ P   +   ++ ++V  + CG   +A +
Sbjct: 581 RNDRDQPVPQEIVNMRGREVLHIACGPTSSACV 613



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 135/342 (39%), Gaps = 67/342 (19%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGE-GIANGFLGGGEHRVGYSFSRQTDALLPK 236
           R+ L     + S GSAH      G+VF WG+   A G LG  + R    F  +   L P 
Sbjct: 290 RVDLDGRAVALSCGSAHSVAVVEGEVFAWGDPNAAPGLLGLSDVRSVMWFPGKI--LFPS 347

Query: 237 AVESTMALDVHNIA--------------CGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           A   T  L  H  A              CG  H   VT+ G  ++WGE S   LGHG   
Sbjct: 348 A---TGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEGSFFALGHGDRE 404

Query: 283 DVSHPQLIEILSGVN--VELVACGEYHTCAVTRS----------------------GDLY 318
               P+ +E  +     V  V+CG +HT A+  +                      G+L+
Sbjct: 405 SSREPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELF 464

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNL--DGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           TWGDG   +G LG        +P K S  L   G  +  +SCG  HT  +TS G L+   
Sbjct: 465 TWGDG--ETGQLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCGQHHTVALTSQGDLWLA- 521

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            G  G + +    +T           +RT  V+ G  H  A              ST   
Sbjct: 522 -GCVGKVDNSLRTTTFTRLTDFETGSVRT--VASGENHVVA--------------STRDA 564

Query: 437 KLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACG 477
           ++F+WG G  GRLG G +   +  P+ +  +    +  +ACG
Sbjct: 565 RVFSWGVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACG 606


>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 502

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 191/370 (51%), Gaps = 50/370 (13%)

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
           V+G +   FV++++CG+ HVA L    KV+TWGKG  GQLG GD  +R+SPTLV+ L+DK
Sbjct: 2   VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 574 QVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRK 633
           QV  +VC  N TA IC+H  +SS D SVCSSC   F F RK+HNCYNCG + C +CSS K
Sbjct: 62  QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAFRFTRKKHNCYNCGSMVCNSCSSNK 121

Query: 634 SLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELAD 693
             +AALAP  +K  RVCD CF +L KT    K + G              +  + + LA+
Sbjct: 122 VHRAALAPDKSKRCRVCDACFNELNKTAEHGKMSCG------------SKIQKEPSYLAE 169

Query: 694 REAQGPRLQDQLS----ILSSFDSNKQTESRLSKQNLKLELQDNHVYPVNKNLQM----- 744
                P+L   L     I+    S+ Q+  + +++            P   N QM     
Sbjct: 170 TRTYTPKLSRMLKEANFIMEKMGSSAQSPGQRNQE------------PATPN-QMQKERW 216

Query: 745 GRIYSP------KSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSSARSSAVTIDDS 798
           G++  P      + +I    + KK+        RM+     PVS K+++  +   T  D 
Sbjct: 217 GQVECPDRFKCARDNIPHRLTPKKQTIDDYPMRRMA----DPVSQKTAAPLTQ--TTSDR 270

Query: 799 KQMNDSLN----QEIIKLRAQVEELTSKSEHLEAELERTSKQLKTVTAIAEDEAEKCKTA 854
           ++  D +     +E+ +L+AQV  L  +  H   ++    ++L+    I  DEA KC+ A
Sbjct: 271 RKEQDLIEKILLEEVKQLQAQVTTLAEECRHRSLKVRLYKRKLEETWLIVRDEATKCEAA 330

Query: 855 NEVIKSLTVQ 864
            E+IK LT Q
Sbjct: 331 EEIIKVLTNQ 340



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%)

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V G L    +  ISCG  H AV+   G +FT+G G+ G LG GD++  S P  VE L   
Sbjct: 2   VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           +   + C    TAA+ V  + SS   S  +SC   F +
Sbjct: 62  QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAFRF 99



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +I+CG+ H  ++   G++F+WG+ + G+LG G   D S P L+E L    V+ + C  
Sbjct: 11  VKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSS 70

Query: 306 YHTCAVTRSGDL 317
             T A+   G++
Sbjct: 71  NSTAAICVHGEI 82



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 14/83 (16%)

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           +SCG  H A + +               GK+FTWG G +G+LG GD   R  P  V  L 
Sbjct: 14  ISCGSSHVAVLAMN--------------GKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 59

Query: 468 DENICQVACGHDLSVALTTSGHV 490
           D+ +  + C  + + A+   G +
Sbjct: 60  DKQVDSIVCSSNSTAAICVHGEI 82


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E+   L   +IA G++   +V+++G++++ GE + GRLG G + ++  P+ I  L
Sbjct: 3035 LPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFL 3094

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+ +S   P+ +   L   
Sbjct: 3095 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNCISLDKPKLIE-VLKSK 3151

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A + S G L+T+G G +G LGHGD I+ + P+ V+ L G R  +V+CG
Sbjct: 3152 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACG 3211

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + + TD            G +++WGDGD G+LG G  +    P  V  L +  +
Sbjct: 3212 SRDAQTMALTTD------------GYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGV 3259

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             QV CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  +  VA G
Sbjct: 3260 IQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKIIH-VAVG 3317

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L+D +V RV CG
Sbjct: 3318 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCG 3369



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 191/387 (49%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +A G +  
Sbjct: 3990 WDGSGAIYGWGHN-HRGQLGGLEG---------PKVKLPAPCESLSALRPIQLAGGEQTL 4039

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G+I+S G  + GRLG G    V  P L+E +  V ++ VA   G  H  A++  
Sbjct: 4040 FAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE 4099

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+KVS   P+ +  +L G+ +  I+CG  H+A +TSAG L+T
Sbjct: 4100 GHVYSWGEG--DDGKLGHGNKVSYDRPKLIE-DLLGVEIVDIACGGHHSAAITSAGWLYT 4156

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4157 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4207

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G
Sbjct: 4208 ---VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWG 4264

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A +   +V+TWG    GQLG
Sbjct: 4265 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4324

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G     + P LV  L+ K++ RV CG
Sbjct: 4325 DGTTSALHRPRLVHALQGKKITRVACG 4351



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 25/334 (7%)

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +Q  ++ WG     +LG  + + +  P   E LS +    +A G      V++ G LY  
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G 
Sbjct: 3070 GEGT--NGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3127

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+ IS   P+ +E L+  R   ++CG  H+AA+               S G+L+
Sbjct: 3128 DGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAI--------------ASNGELY 3173

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +  P+ V  LI   + QVACG     ++ALTT G+VY+ G   
Sbjct: 3174 TWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGD 3233

Query: 498  YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +G+LG   +DG   P  VD  +    V +V CGA    ALT   +V+TWGKG   +LGHG
Sbjct: 3234 FGKLGRGGSDGCYTPLLVD-RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3292

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +  +   PTLV+ L+ K++  V  G    A+ CL
Sbjct: 3293 NDHHVRKPTLVEGLRGKKIIHVAVG----ALHCL 3322



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 165/336 (49%), Gaps = 25/336 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  + G+   G   +G + S     ++P  +ES   + +  +A   G +H + ++ +G 
Sbjct: 4046 GKIYSTGYGAAGRLGIGGTDS----VMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGH 4101

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG +     P+LIE L GV +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4102 VYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGR 4161

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4162 Y--GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4218

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      +P ++++L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4219 LGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL--------------TRSGAVYTWG 4264

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA +  G V+T G    GQLG
Sbjct: 4265 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4324

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
                  L   R+   +    +  VACG+ H  A ++
Sbjct: 4325 DGTTSALHRPRLVHALQGKKITRVACGSAHTLAWST 4360



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 177/374 (47%), Gaps = 42/374 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+           +   PKA+       +  +A   G +HA+ 
Sbjct: 3064 GKLYACGEG-TNGRLGLGD---------DNNMCEPKAIPFLSQFVIKKVAVHSGGKHALA 3113

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIE+L    +  +ACG  H+ A+  +G+LY
Sbjct: 3114 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELY 3173

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG  ++   P+ V   L G  +  ++CG     T  +T+ G+++++G
Sbjct: 3174 TWGLGEY--GRLGHGDTITQTRPKLVQA-LIGHRVVQVACGSRDAQTMALTTDGYVYSWG 3230

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  V+ L  L   +V CG   + A+              T  G
Sbjct: 3231 DGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLAL--------------TKYG 3276

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + I  VA G    +A+T +G VY  G  
Sbjct: 3277 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDN 3336

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
             +GQ G           +  ++ ++ V  V+CG+ H  A                Q  +G
Sbjct: 3337 DHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVD-----------QPSNG 3385

Query: 557  DKDNRNSPTLVDFL 570
            ++D    PT+ D L
Sbjct: 3386 NQDPVTFPTVRDPL 3399



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 174/361 (48%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G +++        + HG E    +PQ +   S
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHGSET--QYPQRVHGFS 564

Query: 295 GVNVELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              + ++A      H  A+T+ G +Y+WG+G  + G LGHG  +S   P+ +   L+  +
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTISYDEPKLIEALLEK-N 621

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + +I+CG  ++A +++ G L+T+G G++G LGHG+      P  V TL+G     V+CG 
Sbjct: 622 IIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACG- 680

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                      S  S     T+ G +F+WGDGD G+LG G  +    P+ V  L+D N+ 
Sbjct: 681 -----------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 729

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   +V   + +  V++++ G  H
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTH 789

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           + ALT    VY WG+   GQ+        + PTL   L  K V  +  G   +   C+  
Sbjct: 790 ILALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFAWCMSA 849

Query: 593 W 593
           W
Sbjct: 850 W 850



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ SS G       S G V+ WGEG  +G LG G      S+ R      PK +E  + +
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEG-DDGKLGHGNK---VSYDR------PKLIEDLLGV 4133

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+++E L    V  VAC 
Sbjct: 4134 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4193

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4194 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPLKID-SLAGLGVVKVECGSQF 4250

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4251 SVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4306

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      +  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 4307 ----------SDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 4356

Query: 483  ALTTS 487
            A +T+
Sbjct: 4357 AWSTA 4361



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    + +  +     H +A     S G ++ WG+G   G LG G+      
Sbjct: 4120 SYDRPKLIEDLLGVEIVDIACGGHHSAA---ITSAGWLYTWGKG-RYGRLGHGD------ 4169

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+     V ++ACG+  A  + VT    ++SWG+   G+LG G    
Sbjct: 4170 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4226

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  I+ L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      PRK
Sbjct: 4227 CKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHR--LGHGTDDHVRRPRK 4284

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    +  G +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 4285 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGK 4343

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            + TRV+CG  HT A   A  + S  P+ +
Sbjct: 4344 KITRVACGSAHTLAWSTAKATQSRMPAST 4372



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G KV    P +    L  I L+     L+    VT+ G 
Sbjct: 3993 SGAIYGWGHN--HRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLF---AVTADGK 4047

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +++ G G+ G LG G   S  IP  +E+++            H     VA  S       
Sbjct: 4048 IYSTGYGAAGRLGIGGTDSVMIPTLLESIQ------------HVFIKKVAVSSGGKHCIA 4095

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG+K     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 4096 LSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLY 4155

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKGA 549
            T G   YG+LG   +D  +  +V   + +  V +VACG+     L  T    V++WG G 
Sbjct: 4156 TWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4215

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4216 YGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 4254



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 116/239 (48%), Gaps = 16/239 (6%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GS H     S G+++ WG G   G LG G+         QT    PK V++ +   V  +
Sbjct: 3159 GSGHSAAIASNGELYTWGLG-EYGRLGHGDTIT------QTR---PKLVQALIGHRVVQV 3208

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+R A  + +T  G ++SWG+   G+LG G       P L++ L+ + V  V CG   
Sbjct: 3209 ACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQF 3268

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+T+ G+++TWG G Y    LGHG+      P  V G L G  + +++ G  H   VT
Sbjct: 3269 SLALTKYGEVWTWGKGDYFR--LGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVT 3325

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
              G ++ +GD   G  G+G       P  V  L   R  RVSCG  H+ A V+    S+
Sbjct: 3326 DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQPSN 3384



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAV---------- 4042

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK+++ G G  GRLG G  +  + P  +  +    I +VA   G    +AL++
Sbjct: 4043 ----TADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSS 4098

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  ++    + ++ACG +H AA+TS   +YTWG
Sbjct: 4099 EGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD D++  P +V+ L+D +V  V CG      +C+
Sbjct: 4159 KGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4202



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 6/163 (3%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G ++ WG   +G+LG G + P++  P     L      Q+A G     A+T  G +Y+ G
Sbjct: 3994 GAIYGWGHNHRGQLG-GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTG 4052

Query: 495  SAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANG 551
              A G+LG+   D  ++PT ++  I   F+++VA   G  H  AL+S   VY+WG+G +G
Sbjct: 4053 YGAAGRLGIGGTDSVMIPTLLE-SIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            +LGHG+K + + P L++ L   ++  + CG + +A I    W+
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWL 4154



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG+G A     G E  V Y          PK +ES     V +++ G  H + +T
Sbjct: 745 GEVYTWGKGDAYRLGHGSEEHVRY----------PKVIESLRDRKVKDLSVGTTHILALT 794

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
           +   ++ WG    G++       +S P L   LS   V  +A G   + A
Sbjct: 795 EDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 39/389 (10%)

Query: 189 SHGSAHEDFDSLGDVFI-WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G++H      G+V   WG G  +G LG G+           D L+P  +    A  + 
Sbjct: 19  SAGASHSVALLTGNVLCSWGRG-EDGQLGHGDAE---------DRLVPTVLSGFDAPAIT 68

Query: 248 NIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
           ++ CGA H    ++ + +++SWG    GRLGHG  +DV  PQ ++ L G+ ++ +ACG+ 
Sbjct: 69  SVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS 128

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H  AVT +G++ +WG     +G LG G+     +P+K+    + + +  I+ G  HTA V
Sbjct: 129 HCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAV 185

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G L+ +G G +G LG GD     +P +V ++ G +   V+CG  HT  V        
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV-------- 237

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 +  G L+T+G    G+LGHGD E  L P  V  L D  I Q++ G   ++ALT+
Sbjct: 238 ------SDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTS 291

Query: 487 SGHVYTMGSAAYGQLGVPVAD-----GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            G +Y  G   +GQ+GV   D     G V    D +I++     VACG  H  AL+    
Sbjct: 292 EGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQ-----VACGWRHTLALSEKKN 346

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           V++WG+G +GQLG+G+  +RN+P L+D L
Sbjct: 347 VFSWGRGTSGQLGNGEIVDRNTPVLIDAL 375



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 20/346 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + SWG    G+LGHG   D   P ++       +  V CG  HT
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A +     +Y+WG G +  G LGHG+    + P+ V   L G+ +  I+CG  H   VT
Sbjct: 78  TAYSEDELQVYSWGWGDF--GRLGHGNSSDVFTPQPVKA-LQGLKIKQIACGDSHCLAVT 134

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            AG + ++G    G LG G    + +P++++    +    ++ G  HTAAV         
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAV--------- 185

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V+ +  E +  VACG   ++ ++ S
Sbjct: 186 -----TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDS 240

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G++YT G + YGQLG     D LVP +V+  + +S + +++ G  H  ALTS  K+Y WG
Sbjct: 241 GNLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTSEGKLYGWG 299

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
               GQ+G G+ D+ +SP  V F +D+++ +V CG   T  +   K
Sbjct: 300 WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKK 345



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 176/337 (52%), Gaps = 30/337 (8%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +++SV+  + H +A+ + D L  V+ WG G           R+G+  S  +D   P+ V+
Sbjct: 66  AITSVICGADHTTAYSE-DEL-QVYSWGWGDFG--------RLGHGNS--SDVFTPQPVK 113

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           +   L +  IACG  H + VT  GE+ SWG    G+LG G   D   PQ I+    V V+
Sbjct: 114 ALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           ++A G  HT AVT  GDLY WG G Y  G LG G +    +P KVS +++G  +  ++CG
Sbjct: 174 MIAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRLLPEKVS-SVEGEKMVLVACG 230

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT  V+ +G+L+T+G   +G LGHGD     +P +VE L+    +++S G  HT A+ 
Sbjct: 231 WRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL- 289

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        TS GKL+ WG    G++G G+ +    P  V+   D+ I QVACG  
Sbjct: 290 -------------TSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWR 336

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
            ++AL+   +V++ G    GQLG   + D   P  +D
Sbjct: 337 HTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLID 373



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVA 527
           + +  V+ G   SVAL T   + + G    GQLG   A D LVPT + G  A + +  V 
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA-ITSVI 71

Query: 528 CGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           CGA H  A +    +VY+WG G  G+LGHG+  +  +P  V  L+  ++K++ CG
Sbjct: 72  CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           +  +ACG RH + ++++  +FSWG  + G+LG+G   D + P LI+ LS
Sbjct: 328 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 376


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 202/385 (52%), Gaps = 31/385 (8%)

Query: 189 SHGSAHEDFDSLGDVFI-WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G++H      G+V   WG G  +G LG G+           D L+P  +    A  + 
Sbjct: 20  SAGASHSVALLTGNVLCSWGRG-EDGQLGHGDAE---------DRLVPTVLSGFDAPGIT 69

Query: 248 NIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
           ++ CGA H    ++ + +++SWG    GRLGHG  +DV  PQ ++ L G+ ++ +ACG+ 
Sbjct: 70  SVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS 129

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H  AVT +G + +WG     +G LG G+     +P+K+    +G+ +  I+ G  HTA V
Sbjct: 130 HCLAVTMAGQVQSWG--RNQNGQLGLGTTEDSLLPQKIQA-FEGVCVKMIAAGAEHTAAV 186

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G L+ +G G +G LG GD     +P +V ++ G +   V+CG  HT  V        
Sbjct: 187 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV-------- 238

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 +  G L+T+G    G+LGHGD E  L P  +  L D  I Q++ G   ++ALT+
Sbjct: 239 ------SDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTS 292

Query: 487 SGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            G +Y  G   +GQ+GV   D    P +V     +  + +VACG  H  AL+    V++W
Sbjct: 293 EGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFP-EDQKISQVACGWRHTLALSEKKNVFSW 351

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFL 570
           G+G +GQLG+G+  +RN+P L+D L
Sbjct: 352 GRGTSGQLGNGEIVDRNTPVLIDAL 376



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 182/356 (51%), Gaps = 24/356 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           A +P +   T+ L    ++ GA H+V +     + SWG    G+LGHG   D   P ++ 
Sbjct: 6   AAVPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLS 61

Query: 292 ILSGVNVELVACGEYHTCAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
                 +  V CG  HT A +     +Y+WG G +  G LGHG+    + P+ V   L G
Sbjct: 62  GFDAPGITSVICGADHTTAYSEDELQVYSWGWGDF--GRLGHGNSSDVFTPQPVKA-LQG 118

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + +  I+CG  H   VT AG + ++G    G LG G    + +P++++   G+    ++ 
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAA 178

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTAAV              T  G L+ WG G  G LG GD+  RL PE V+ +  E 
Sbjct: 179 GAEHTAAV--------------TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 224

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACG 529
           +  VACG   ++ ++ SG++YT G + YGQLG     D LVP +++  + +S + +++ G
Sbjct: 225 MVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQISGG 283

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             H  ALTS  K+Y WG    GQ+G G+ D+  SP  V F +D+++ +V CG   T
Sbjct: 284 WRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHT 339



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 175/336 (52%), Gaps = 30/336 (8%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ + D L  V+ WG G           R+G+  S  +D   P+ V++
Sbjct: 68  ITSVICGADHTTAYSE-DEL-QVYSWGWGDFG--------RLGHGNS--SDVFTPQPVKA 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT  G++ SWG    G+LG G   D   PQ I+   GV V++
Sbjct: 116 LQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKM 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT  GDLY WG G Y  G LG G +    +P KVS +++G  +  ++CG 
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRLLPEKVS-SVEGEKMVLVACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+ +G+L+T+G   +G LGHGD     +P ++E L+    +++S G  HT A+  
Sbjct: 233 RHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G G+ +    P  V    D+ I QVACG   
Sbjct: 291 ------------TSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
           ++AL+   +V++ G    GQLG   + D   P  +D
Sbjct: 339 TLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLID 374



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           +  +ACG RH + ++++  +FSWG  + G+LG+G   D + P LI+ LS
Sbjct: 329 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 377


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 199/395 (50%), Gaps = 47/395 (11%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3984 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4030

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4090

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4091 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTR---------VSCGVWHTAAVVVATDSSSSSP 429
             +G LG G+  +  +P  V  L G +  +         V+CG+ HT AV         S 
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV---------SA 4198

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
             GS     ++ +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  G 
Sbjct: 4199 DGSM----VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQ 4254

Query: 490  VYTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            VYT G      +G+P         P +V   +A   +E+VA GA H  ALTST  +Y WG
Sbjct: 4255 VYTFGQDRL--IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALTSTGDIYAWG 4311

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              + GQLG G  ++   PTLV  L+ K V+++  G
Sbjct: 4312 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4346



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S++LT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 28/300 (9%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 4073 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4132

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY---------ISCG 359
              VT  G L+T+G+G Y  G LG G+  +  +P +V+  L+G  +           ++CG
Sbjct: 4133 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQARNKSIICSVACG 4189

Query: 360  LWHTAVVTSAGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            L HT  V++ G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+
Sbjct: 4190 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                          T  G+++T+G      L  G       P+ V  L    I  VA G 
Sbjct: 4250 --------------TKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGA 4295

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            + ++ALT++G +Y  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 4296 EHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 162/338 (47%), Gaps = 39/338 (11%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3984 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4038

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4039 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4095

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 4096 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 4141

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI---------CQVACGHDLSVALTTSG- 488
            FT+G+GD GRLG G+   +  PE V  L    I         C VACG + ++A++  G 
Sbjct: 4142 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGS 4201

Query: 489  HVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
             V+  G   YG+LG+  +     P +VD  +    +++VACG     ALT   +VYT+G+
Sbjct: 4202 MVWAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGQVYTFGQ 4260

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
                 L  G   N N P  V  L    ++ V  G   T
Sbjct: 4261 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4298



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 33/286 (11%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3984 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4037

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4083

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 4084 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4143

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDG----EIAE----SFVEEVACGAYHVAALTST-SKV 542
             G+  YG+LG+   ++  +P RV      +I +    S +  VACG  H  A+++  S V
Sbjct: 4144 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMV 4203

Query: 543  YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            + +G G  G+LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 4204 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 38/317 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 4087 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4136

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL---------VACGEYHTCAV 311
              G++F++G    GRLG G  ++   P+ +  L G  +           VACG  HT AV
Sbjct: 4137 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV 4196

Query: 312  TRSGDL-YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
            +  G + + +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  G
Sbjct: 4197 SADGSMVWAFGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDG 4253

Query: 371  HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
             ++TFG      L  G   + + P++V  L G+    V+ G  HT A+            
Sbjct: 4254 QVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL------------ 4301

Query: 431  GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-H 489
              TS G ++ WG   +G+LG G       P  V  L  +N+ Q++ G   S A T     
Sbjct: 4302 --TSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVP 4359

Query: 490  VYTMGSAAYGQLGVPVA 506
                G +   QLG+P A
Sbjct: 4360 PRAPGVSVPLQLGLPDA 4376



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I QV+ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQVSAGTSHSLAWT 734



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 16/204 (7%)

Query: 169  DRSSAAETFRISLS---SVVSSSSHGSAHEDFDSLGDVFIWGEGIAN-GFLGGGEHRVGY 224
            +R +A E ++I  +   S++ S + G  H    S     +W  G  + G LG     +G 
Sbjct: 4164 ERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLG-----LGN 4218

Query: 225  SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
            S ++ +    P+ V+    + +  +ACG + +V +TK G+++++G++    L  GR  + 
Sbjct: 4219 STAKSS----PQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNH 4274

Query: 285  SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            + PQ + +L+GV +E VA G  HT A+T +GD+Y WG  +     LGH + V    P  V
Sbjct: 4275 NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVR--EPTLV 4332

Query: 345  SGNLDGIHLSYISCGLWHTAVVTS 368
            +  L G ++  IS G  H+A  T+
Sbjct: 4333 T-VLQGKNVRQISAGRCHSAAWTA 4355



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  +S G
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQVSAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 227/425 (53%), Gaps = 45/425 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V+ +S+     E   +L  VF +G G+  G LG G+           + L PK +E    
Sbjct: 30  VIPASALAQESETNANLVSVFSFGMGMY-GKLGHGD---------TANQLAPKKIEGLS- 78

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
            D+  IA G  H++ +TK G+++S+G    GRLGHG       P+ IE LS  +++ +A 
Sbjct: 79  -DIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLS--DIQAIAA 135

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G++H+ A+T+SGD+Y++G+GT  SG LGHG+      P+K+    D   +  I+ G  H+
Sbjct: 136 GDFHSLALTKSGDVYSFGNGT--SG-LGHGNTEDQSTPKKIESLSD---VQAIAAGGNHS 189

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             +T +G +++FG G FG LGHGD  S   P+++E L  ++   ++ G  H+ A+     
Sbjct: 190 LALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQA--IAAGGNHSLAL----- 242

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T  G ++++G G  G+LGHGD E +L P+ +  L D  I  VA G + S+A
Sbjct: 243 ---------TKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSD--IQAVAAGANHSLA 291

Query: 484 LTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           LT SG VY+ G    GQLG     D L P +++G      ++ +A G +H  ALT +  V
Sbjct: 292 LTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG---LKDIQAIAAGDFHSLALTKSGDV 348

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVC 602
           Y++G G +G LGHGD  N+  P  ++ L D  ++ +  G N +  + + +  S++D    
Sbjct: 349 YSFGNGTSG-LGHGDTANQLEPKKIEGLTD--IQAIAAGANHSLALAVEEQDSTIDPDEA 405

Query: 603 SSCHN 607
           S   N
Sbjct: 406 SFDKN 410


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/352 (35%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G +++V  P+ I  L
Sbjct: 2813 LPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 2872

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+ +S   PR +  +L   
Sbjct: 2873 SQYVIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNSISLDKPRLIE-SLKSK 2929

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD  + S P+ V++L G R  +++CG
Sbjct: 2930 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACG 2989

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        S  +     T+ G +++WGDGD G+LG G  +    P  +  L    +
Sbjct: 2990 ------------SRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3037

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             Q+ CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  +  VA G
Sbjct: 3038 VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKIIH-VAVG 3095

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T   +VY WG   +GQ G+G       P+LV  L D +V RV CG
Sbjct: 3096 ALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCG 3147



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 187/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +  G +  
Sbjct: 3780 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPVLCESLSALRPVQLTGGEQTL 3829

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G++++ G  + GRLG G    V  P L+E +  V V+ VA   G  H  A++  
Sbjct: 3830 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 3889

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++S   P+ +   L G  +  I+CG  H+A +TSAG L+T
Sbjct: 3890 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 3946

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ +E L+  +   V+CG      + V  D +         
Sbjct: 3947 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 3997

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG +YT G
Sbjct: 3998 ---VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWG 4054

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A T   +V+TWG    GQLG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4115 DGTTSALQRPRLVHALQGKKITRVACG 4141



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 179/391 (45%), Gaps = 42/391 (10%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S     ++P  +ES   + V  +A   G +H + ++ +G 
Sbjct: 3836 GKVYATGYGAVGRLGIGGTDS----VMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 3891

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+LIE L G  +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ +   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 3952 Y--GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4008

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      IP ++E+L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4009 LGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL--------------TRSGAIYTWG 4054

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA T  G V+T G    GQLG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                  L   R+   +    +  VACG+ H  A ++     +             K    
Sbjct: 4115 DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWSTMKATQS-------------KMPAT 4161

Query: 563  SPTLVDFLKDKQV----KRVVCGLNFTAIIC 589
            +P   D +KD        R+V   +F  ++C
Sbjct: 4162 TPMEYDLVKDLPFPVLHNRLVLLHHFAELLC 4192



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 23/329 (6%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  G+GT
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2851

Query: 325  YNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
              +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G  G L
Sbjct: 2852 --NGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKL 2909

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            GHG+ IS   PR +E+L+  R   ++CG  H+AA+              TS G+L+TWG 
Sbjct: 2910 GHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI--------------TSSGELYTWGL 2955

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQL 501
            G+ GRLGHGD   +  P+ V  L+ + + Q+ACG     ++ALT  G VY+ G   +G+L
Sbjct: 2956 GEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKL 3015

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G   +DG     +   +    V ++ CGA    ALT   +V+TWGKG   +LGHG+  + 
Sbjct: 3016 GRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              PTLV+ L+ K++  V  G    A+ CL
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVG----ALHCL 3100



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 167/345 (48%), Gaps = 31/345 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+          ++   PK +       +  +A   G +HA+ 
Sbjct: 2842 GKLYACGEG-TNGRLGLGD---------DSNVCEPKPIPFLSQYVIKKVAVHSGGKHALA 2891

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LY
Sbjct: 2892 LTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 2951

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V  +L G  +  I+CG     T  +T+ G ++++G
Sbjct: 2952 TWGLGEY--GRLGHGDTATQSKPKLVQ-SLVGQRVIQIACGSRDAQTMALTADGLVYSWG 3008

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  ++ L GL   ++ CG   + A+              T  G
Sbjct: 3009 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL--------------TKYG 3054

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + I  VA G    +A+T  G VY  G  
Sbjct: 3055 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDN 3114

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             +GQ G           +  E+ ++ V  V+CG+ H  A   T +
Sbjct: 3115 DHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3159



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 155/306 (50%), Gaps = 33/306 (10%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G      S+ R      PK +E  +  
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHGNR---LSYDR------PKLIEELLGT 3923

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+LIE L    V  VACG
Sbjct: 3924 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 3983

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C IP K+  +L G+ +  + CG   
Sbjct: 3984 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKIPMKIE-SLAGLGVIKVECGSQF 4040

Query: 363  TAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            +  +T +G ++T+G G +  LGHG  DH+    PR+V  L+G +   ++ G  H  A   
Sbjct: 4041 SVALTRSGAIYTWGKGDYHRLGHGTDDHVRR--PRKVAALQGKKIISIATGSLHCVAC-- 4096

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                        T  G++FTWGD D+G+LG G       P  V  L  + I +VACG   
Sbjct: 4097 ------------TDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4144

Query: 481  SVALTT 486
            ++A +T
Sbjct: 4145 TLAWST 4150



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 22/261 (8%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H + +T+   ++SWG    GRLGHG       P+LIE L   N+  +ACG  ++ A++ +
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572

Query: 315 GDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLW---HTAVVTSAG 370
           G+LYTWG G Y  G LGHG S     IP  V+  L+G  + Y++CG      T  VT++G
Sbjct: 573 GELYTWGRGNY--GKLGHGNSDKDVMIPTLVTA-LNGHMVVYVACGGGRDPQTLCVTASG 629

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            +F++GDG+ G LG G    +  P+ V+ L  +   +V CG   +AA+            
Sbjct: 630 IVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAAL------------ 677

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
             T+ G+++TWG G+  +LGHG+++   +P+ +  L  + I  +  GH   +ALT    V
Sbjct: 678 --TAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLV 735

Query: 491 YTMGSAAYGQLGVPVADGLVP 511
           Y  G   +GQ+  P    +VP
Sbjct: 736 YGWGRNDHGQID-PALGTIVP 755



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 164/362 (45%), Gaps = 30/362 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G ++         + +G E      Q +   S
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVY--------MMYYGSET-----QRVYGFS 498

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              + ++A      H  A+T+   +Y+WG+G    G LGHG+      P+ +   ++  +
Sbjct: 499 EKPITMIASHSDGTHYLALTQDNSVYSWGNG--ECGRLGHGNMTWYDEPKLIEALVEK-N 555

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCG 411
           +++I+CG  ++A ++S G L+T+G G++G LGHG+      IP  V  L G     V+CG
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACG 615

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  +  T S           G +F+WGDG+ G+LG G  +    P+ V  L+D N+
Sbjct: 616 GGRDPQTLCVTAS-----------GIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINV 664

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
            +V CG   S ALT  G VYT G     +LG    D +   ++   +    ++++  G  
Sbjct: 665 AKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHL 724

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           HV ALT    VY WG+  +GQ+          PTL      K V  + CG   +   C  
Sbjct: 725 HVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTA 784

Query: 592 KW 593
            W
Sbjct: 785 AW 786



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 123/251 (49%), Gaps = 15/251 (5%)

Query: 182  SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            + +V  +  G       S G ++ WG+G   G LG G+           D L PK +E+ 
Sbjct: 3923 TEIVDIACGGHHSAAITSAGWLYTWGKG-RYGRLGHGDSE---------DQLTPKLIEAL 3972

Query: 242  MALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                V ++ACG+  A  + VT    ++SWG+   G+LG G       P  IE L+G+ V 
Sbjct: 3973 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVI 4032

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKV+  L G  +  I+ G
Sbjct: 4033 KVECGSQFSVALTRSGAIYTWGKGDYHR--LGHGTDDHVRRPRKVAA-LQGKKIISIATG 4089

Query: 360  LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              H    T  G +FT+GD   G LG G   +   PR V  L+G + TRV+CG  HT A  
Sbjct: 4090 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4149

Query: 420  VATDSSSSSPS 430
                + S  P+
Sbjct: 4150 TMKATQSKMPA 4160



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 39/314 (12%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++++S S G+ +        V+ WG    NG  G    R+G+      D   PK +E+ +
Sbjct: 503 TMIASHSDGTHYLALTQDNSVYSWG----NGECG----RLGHGNMTWYDE--PKLIEALV 552

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELV 301
             ++  IACG+ ++  ++  GE+++WG  + G+LGHG  + DV  P L+  L+G  V  V
Sbjct: 553 EKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYV 612

Query: 302 ACG---EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           ACG   +  T  VT SG +++WGDG  N G LG G       P+ V   LD I+++ + C
Sbjct: 613 ACGGGRDPQTLCVTASGIVFSWGDG--NHGKLGRGGCDGSKTPKIVDKLLD-INVAKVYC 669

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G   +A +T+ G ++T+G G    LGHG+      P+ ++ L+  +   +  G  H  A+
Sbjct: 670 GQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLAL 729

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQV 474
                         T    ++ WG  D G+    LG    EP L P        +N+  +
Sbjct: 730 --------------TEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPT----FSGKNVIGL 771

Query: 475 ACGHDLSVALTTSG 488
           ACG   S A  T+ 
Sbjct: 772 ACGPTQSFAWCTAA 785



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +   +  +L  +    ++ G      VT+ G 
Sbjct: 3783 SGAIYGWGHN--HRGQLGGLEGAKVKLPV---LCESLSALRPVQLTGGEQTLFAVTADGK 3837

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 3838 VYATGYGAVGRLGIGGTDSVMVPTLLESIQ------------HVFVKKVAVNSGGKHCLA 3885

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 3886 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 3945

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKG 548
            T G   YG+LG     D L P  ++  + +  V +VACG+     L  T    V++WG G
Sbjct: 3946 TWGKGRYGRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4004

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4005 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4044



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAV---------- 3832

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    + +VA   G    +AL++
Sbjct: 3833 ----TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 3888

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  E+  + + ++ACG +H AA+TS   +YTWG
Sbjct: 3889 EGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 3948

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++ +P L++ L+D +V  V CG      +C+
Sbjct: 3949 KGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 3992



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+  G     A+T  G VY  G 
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG+   D  +VPT ++  I   FV++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 3844 GAVGRLGIGGTDSVMVPTLLES-IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 3902

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++ + + P L++ L   ++  + CG + +A I    W+
Sbjct: 3903 LGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWL 3944


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 193/371 (52%), Gaps = 36/371 (9%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D   P  + +   LD+ +I CGA H    ++ + E
Sbjct: 42  WGRG-EDGQLGHGD---------AEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRME 91

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I+ L  + +  +ACG+ H  AVT  G++ +WG   
Sbjct: 92  VYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWG--R 149

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  HTA VT  G L+ +G G +G LG
Sbjct: 150 NQNGQLGLGTTEDSLVPQKIQA-FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLG 208

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P +V  + G +   V+CG  HT +V              +S G L+T+G  
Sbjct: 209 LGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISV--------------SSSGGLYTYGWS 254

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+LGHGD E  L P  V  L D  I  ++ G   ++ALT+ G++Y  G   +GQ+GV 
Sbjct: 255 KYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGV- 313

Query: 505 VADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             D +     V  +   E A S V+ ++CG  H  A+T    V++WG+G NGQLGHG+  
Sbjct: 314 -GDNIDHCSPVQVKFPHEQAHSLVQ-ISCGWRHTLAITERQNVFSWGRGTNGQLGHGESM 371

Query: 560 NRNSPTLVDFL 570
           +RN P +++ L
Sbjct: 372 DRNLPKIIEVL 382



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 22/344 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G+++  + CG  HT
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + + S  ++Y+WG G +  G LGHG+    + P+ +   L  + +  I+CG  H   VT
Sbjct: 83  TSYSESRMEVYSWGWGDF--GRLGHGNSSDLFTPQPIKA-LHSLKIRQIACGDSHCLAVT 139

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++  +G+    V+ G  HTAAV         
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAV--------- 190

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  RL PE V+ +  + +  VACG   ++++++S
Sbjct: 191 -----TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSS 245

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D L P +V+  + +S++  ++ G  H  ALTS   +Y WG
Sbjct: 246 GGLYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSDGNLYGWG 304

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDK--QVKRVVCGLNFTAII 588
               GQ+G GD  +  SP  V F  ++   + ++ CG   T  I
Sbjct: 305 WNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAI 348



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 29/303 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P+ +++  +L +  IACG  H + VT 
Sbjct: 91  EVYSWGWGDFG--------RLGHGNS--SDLFTPQPIKALHSLKIRQIACGDSHCLAVTM 140

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            GE+ SWG    G+LG G   D   PQ I+   GV++++VA G  HT AVT  G+LY WG
Sbjct: 141 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWG 200

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P KVS  ++G  +  ++CG  HT  V+S+G L+T+G   +G
Sbjct: 201 WGRY--GNLGLGDRNDRLVPEKVS-LVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYG 257

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD      P +VE LR    + +S G  HT A+              TS G L+ W
Sbjct: 258 QLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMAL--------------TSDGNLYGW 303

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDE--NICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           G    G++G GD      P  V    ++  ++ Q++CG   ++A+T   +V++ G    G
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNG 363

Query: 500 QLG 502
           QLG
Sbjct: 364 QLG 366



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 121/244 (49%), Gaps = 17/244 (6%)

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           +VSG +  + L  IS G  H+  + S   + ++G G  G LGHGD      P ++ TL G
Sbjct: 12  EVSGPIRQVIL--ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDG 69

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
           L    ++CG  HT +              S S  ++++WG GD GRLGHG+      P+ 
Sbjct: 70  LDIISITCGADHTTSY-------------SESRMEVYSWGWGDFGRLGHGNSSDLFTPQP 116

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAES 521
           +  L    I Q+ACG    +A+T  G V + G    GQLG+    D LVP ++      S
Sbjct: 117 IKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVS 176

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            ++ VA GA H AA+T   ++Y WG G  G LG GD+++R  P  V  +   ++  V CG
Sbjct: 177 -IKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACG 235

Query: 582 LNFT 585
              T
Sbjct: 236 WRHT 239



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            I+CG RH + +T++  +FSWG  + G+LGHG   D + P++IE+LS
Sbjct: 337 QISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLS 383


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 181/342 (52%), Gaps = 19/342 (5%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQL 289
           D LLP+ + +    ++  +ACGA H    +  +  I+SWG    GRLGHG  +D+  P  
Sbjct: 44  DRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+ L G+ +  +ACG+ H  AVT  G++Y+WG     +G LG G      +P K+    +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLLA-FE 160

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ +  ++ G  HTA VT +G L+ +G G +G LG GD     +P EV  +   +   V+
Sbjct: 161 GVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HT AV              +  GKL+T+G    G+LGHGD    L P  VA L + 
Sbjct: 221 CGWRHTIAV--------------SQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF 266

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVAC 528
           NI QV+ G   +VALT +G +Y  G   +GQ+G   V D   P  +        V +V+C
Sbjct: 267 NITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSC 326

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           G  H  A+T  + VY+WG+G +GQLGHGD  +R++P  +  L
Sbjct: 327 GWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 178/343 (51%), Gaps = 21/343 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H V +     + S+G    G+LGHG   D   P++I  L+   + LVACG  HT
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHT 69

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + +   +Y+WG G +  G LGHG+    ++P  +   L G+ +  I+CG  H   VT
Sbjct: 70  TAYSATRLTIYSWGWGDF--GRLGHGNSSDLFVPHPIKA-LQGLEIRQIACGDSHCLAVT 126

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G ++++G    G LG GD   + +P ++    G+    ++ G  HTAAV         
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAV--------- 177

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  GKL+ WG G  G LG GD+  R+ P  V  + DE +C VACG   ++A++ S
Sbjct: 178 -----TDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQS 232

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG    AD L+P +V   +AE  + +V+ G  H  ALT   K+Y WG
Sbjct: 233 GKLYTYGWSKYGQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLYGWG 291

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQ-VKRVVCGLNFTAII 588
               GQ+G GD D+  SP L+      Q V +V CG   T  +
Sbjct: 292 WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 148/283 (52%), Gaps = 20/283 (7%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           R+G+  S  +D  +P  +++   L++  IACG  H + VT  GE++SWG    G+LG G 
Sbjct: 89  RLGHGNS--SDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD 146

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
             D   P  +    GV+V+++A G  HT AVT SG LY WG G Y  G LG G +    +
Sbjct: 147 TDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRY--GNLGLGDRGDRML 204

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           P +V    D   +  ++CG  HT  V+ +G L+T+G   +G LGHGD+    +P +V  L
Sbjct: 205 PAEVPAVGD-EKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAAL 263

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                T+VS G  HT A+              T  GKL+ WG    G++G GD +    P
Sbjct: 264 AEFNITQVSGGWRHTVAL--------------TEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 461 ECVA-PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + ++ P   + + QV+CG   +VA+T   +VY+ G    GQLG
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 19/224 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+  + + + H +A  D    G ++ WG G   G LG G+         + D +LP  V
Sbjct: 162 VSVKMLAAGAEHTAAVTDS---GKLYGWGWG-RYGNLGLGD---------RGDRMLPAEV 208

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +     +  +ACG RH + V++ G+++++G    G+LGHG  AD   P  +  L+  N+
Sbjct: 209 PAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH--LSYI 356
             V+ G  HT A+T +G LY WG   +  G +G G       P+ +S  + G H  +  +
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKF--GQVGSGDVDDHTSPQLIS--IPGQHQRVVQV 324

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           SCG  HT  VT   +++++G G+ G LGHGD +  S P+ ++ L
Sbjct: 325 SCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           +  +  V+ G   +VAL +   V + G    GQLG   A+  +  R+ G + +  +  VA
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVA 63

Query: 528 CGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           CGA H  A ++T   +Y+WG G  G+LGHG+  +   P  +  L+  +++++ CG
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACG 118



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH V VT +  ++SWG  + G+LGHG   D S P+ I+ LS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 188/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G + +V  P+ I  L
Sbjct: 2612 LPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFL 2671

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+ +S   P+ +   L   
Sbjct: 2672 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNCISLDKPKLIE-ILKSK 2728

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A + S G L+T+G G +G LGHGD I+ + P+ V+ L G R  +V+CG
Sbjct: 2729 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACG 2788

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + + TD            G +++WGDGD G+LG G  +    P  V  L    +
Sbjct: 2789 SRDAQTMALTTD------------GCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGV 2836

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             QV CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  +  VA G
Sbjct: 2837 IQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKIIH-VAVG 2894

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L+D +V RV CG
Sbjct: 2895 ALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCG 2946



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 177/374 (47%), Gaps = 42/374 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+           +   PKA+       +  +A   G +HA+ 
Sbjct: 2641 GKLYACGEG-TNGRLGLGD---------DNNVCEPKAIPFLSQFVIKKVAVHSGGKHALA 2690

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIEIL    +  +ACG  H+ A+  +G+LY
Sbjct: 2691 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELY 2750

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG  ++   P+ V   L G  +  ++CG     T  +T+ G ++++G
Sbjct: 2751 TWGLGEY--GRLGHGDTITQTRPKLVQA-LVGQRVVQVACGSRDAQTMALTTDGCVYSWG 2807

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  V+ L GL   +V CG   + A+              T  G
Sbjct: 2808 DGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLAL--------------TKYG 2853

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + I  VA G    +A+T +G VY  G  
Sbjct: 2854 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDN 2913

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
             +GQ G           +  ++ ++ V  V+CG+ H  A                Q  +G
Sbjct: 2914 DHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVD-----------QPSNG 2962

Query: 557  DKDNRNSPTLVDFL 570
            ++D    PT+ D L
Sbjct: 2963 NQDPVTFPTVRDPL 2976



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 172/334 (51%), Gaps = 25/334 (7%)

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +Q  ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 2646

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G 
Sbjct: 2647 GEGT--NGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 2704

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+ IS   P+ +E L+  R   ++CG  H+AA+               S G+L+
Sbjct: 2705 DGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAI--------------ASNGELY 2750

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +  P+ V  L+ + + QVACG     ++ALTT G VY+ G   
Sbjct: 2751 TWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGD 2810

Query: 498  YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +G+LG   +DG   P  VD  +    V +V CGA    ALT   +V+TWGKG   +LGHG
Sbjct: 2811 FGKLGRGGSDGCYTPLAVD-RLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 2869

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +  +   PTLV+ L+ K++  V  G    A+ CL
Sbjct: 2870 NDHHVRKPTLVEGLRGKKIIHVAVG----ALHCL 2899



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 172/361 (47%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   +    L +  + C  R  ++++  G  ++        + HG E    +P  +   S
Sbjct: 94  PFYCDPIAGLGIKQLCCTERSLMILSLNGNAYN--------MYHGSET--QYPLRVHGFS 143

Query: 295 GVNVELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              + ++A      H  A+T+ G +Y+WG+G  + G LGHG  VS   P+ +   LD  +
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPKLIESLLDK-N 200

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + +I+CG  ++A ++++G L+T+G G++G LGHG+      P  V TL+G     V+CG 
Sbjct: 201 IVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACG- 259

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                      S  S     T+ G +F+WGDGD G+LG G  +    P+ V  L+D N+ 
Sbjct: 260 -----------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 308

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   +V   + +  +++++ G  H
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTH 368

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           + ALT    VY WG+   GQ+        + PTL   L  K V  +  G   +   C+  
Sbjct: 369 ILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFAWCMSA 428

Query: 593 W 593
           W
Sbjct: 429 W 429



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 33/284 (11%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++++S + G  +      G V+ WG G       GG  R+G+  +   D   PK +ES +
Sbjct: 148 TMIASHADGKHYLALTQDGCVYSWGNG------DGG--RLGHGDTVSYDE--PKLIESLL 197

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             ++  IACG+ ++  ++  GE+++WG  + GRLGHG   DV  P L+  L G  V  VA
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVA 257

Query: 303 C--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           C  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I++  + CG 
Sbjct: 258 CGSGDSQTLCVTASGIVFSWGDGDY--GKLGRGGTDGSKTPKIVDKLLD-INVVKVFCGG 314

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T+ G ++T+G G    LGHG       P+ +E+LR  +   +S G  H  A+  
Sbjct: 315 QFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL-- 372

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFP 460
                       T    ++ WG  D G+    LG    EP L P
Sbjct: 373 ------------TEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCP 404



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 34/290 (11%)

Query: 310  AVTRSGD-------LYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
            A+ RS D       +Y WG  D     GL   GSK+   I  +V   L  IH++  S  L
Sbjct: 2577 AIQRSTDTPPQQSAVYVWGLNDKDQLGGL--KGSKIKLPIYSEVLSKLKPIHIAGGSKTL 2634

Query: 361  WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            +   +V+  G L+  G+G+ G LG GD  +   P+ +  L      +V+       A+ +
Sbjct: 2635 F---IVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALAL 2691

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              D            GK+F+WG+G+ G+LGHG+      P+ +  L  + I  +ACG   
Sbjct: 2692 TQD------------GKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGH 2739

Query: 481  SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR---VDGEIAESFVEEVACGAY--HVAA 535
            S A+ ++G +YT G   YG+LG    D +  TR   V   + +  V+ VACG+      A
Sbjct: 2740 SAAIASNGELYTWGLGEYGRLGH--GDTITQTRPKLVQALVGQRVVQ-VACGSRDAQTMA 2796

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            LT+   VY+WG G  G+LG G  D   +P  VD L    V +V CG  F+
Sbjct: 2797 LTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFS 2846



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 127/304 (41%), Gaps = 70/304 (23%)

Query: 177  FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
            F I   +V S   H  A       G VF WGEG  +G LG G      S  +      PK
Sbjct: 2674 FVIKKVAVHSGGKHALA---LTQDGKVFSWGEG-EDGKLGHGN---CISLDK------PK 2720

Query: 237  AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
             +E   +  + +IACG+ H+  +   GE+++WG    GRLGHG     + P+L++ L G 
Sbjct: 2721 LIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQ 2780

Query: 297  NVELVACG--EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             V  VACG  +  T A+T  G +Y+WGDG +  G LG G    C+ P  V   L+G+ + 
Sbjct: 2781 RVVQVACGSRDAQTMALTTDGCVYSWGDGDF--GKLGRGGSDGCYTPLAVD-RLNGLGVI 2837

Query: 355  YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG------------ 402
             + CG   +  +T  G ++T+G G +  LGHG+      P  VE LRG            
Sbjct: 2838 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 2897

Query: 403  ----------------------------------------LRTTRVSCGVWHTAAVVVAT 422
                                                     R  RVSCG  H+ A V+  
Sbjct: 2898 CLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVD 2957

Query: 423  DSSS 426
              S+
Sbjct: 2958 QPSN 2961



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTTSGHVYTM 493
            GKL+  G+G  GRLG GD      P+ +  L    I +VA   G   ++ALT  G V++ 
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 2700

Query: 494  GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            G    G+LG      L   ++   +    + ++ACG+ H AA+ S  ++YTWG G  G+L
Sbjct: 2701 GEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCG------LNFTAIICLHKW----VSSVDHSVCS 603
            GHGD   +  P LV  L  ++V +V CG      +  T   C++ W       +      
Sbjct: 2761 GHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSD 2820

Query: 604  SCHNPFGFRR 613
             C+ P    R
Sbjct: 2821 GCYTPLAVDR 2830



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG+G A     G E  V Y          PK +ES     + +++ G  H + +T
Sbjct: 324 GEVYTWGKGDAYRLGHGSEEHVRY----------PKVIESLRDKKIKDLSVGTTHILALT 373

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
           +   ++ WG    G++       VS P L   LS   V  +A G   + A
Sbjct: 374 EDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFA 423


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/386 (36%), Positives = 195/386 (50%), Gaps = 49/386 (12%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3536 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 3582

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 3583 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3642

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 3643 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P            RV+CG+ HT AV         S  GS     +
Sbjct: 3700 DYGRLGLGNTSNKKLPE-----------RVACGLNHTLAV---------SADGSM----V 3735

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ V  L    I +VACG   SVALT  GHVYT G    
Sbjct: 3736 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3795

Query: 499  GQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              +G+P         P +V   +A   +E+VA GA H  AL ST  VY WG  + GQLG 
Sbjct: 3796 --IGLPEGRARNHNRPQQVP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  ++   PTLV  L+ K V+++  G
Sbjct: 3853 GHTNHVREPTLVTVLQGKNVRQISAG 3878



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 418

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 479 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 581

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 641

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 642 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 699



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 30/291 (10%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+
Sbjct: 3625 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3684

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              VT  G L+T+G+G Y  G LG G+  +  +P +V            +CGL HT  V++
Sbjct: 3685 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERV------------ACGLNHTLAVSA 3730

Query: 369  AGHL-FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + + FGDG +G LG G+  + S P++V+ L G+   +V+CG   + A+         
Sbjct: 3731 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL--------- 3781

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                 T  G ++T+G      L  G       P+ V  L    I  VA G + ++AL ++
Sbjct: 3782 -----TKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALAST 3836

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            G VY  GS + GQLG+   + +    +   +    V +++ G  H AA T+
Sbjct: 3837 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 3887



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 158/329 (48%), Gaps = 41/329 (12%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3536 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 3590

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 3591 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3647

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+      PR++E L+G    ++SCG  H+A V              TS GKL
Sbjct: 3648 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV--------------TSDGKL 3693

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE           +VACG + ++A++  G  V+  G   
Sbjct: 3694 FTFGNGDYGRLGLGNTSNKKLPE-----------RVACGLNHTLAVSADGSMVWAFGDGD 3742

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P +VD  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 3743 YGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 3801

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  V  L    ++ V  G   T
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHT 3830



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 35/277 (12%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3536 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 3589

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 3635

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++CG   S  +T+ G ++T
Sbjct: 3636 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 3695

Query: 493  MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTWGKGANG 551
             G+  YG+LG+                +   E VACG  H  A+++  S V+ +G G  G
Sbjct: 3696 FGNGDYGRLGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYG 3744

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G+   ++SP  VD L    +K+V CG  F+  +
Sbjct: 3745 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 3781



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 143/308 (46%), Gaps = 40/308 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  ++CG +H+ +VT
Sbjct: 3639 GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 3688

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P           E VACG  HT AV+  G + + 
Sbjct: 3689 SDGKLFTFGNGDYGRLGLGNTSNKKLP-----------ERVACGLNHTLAVSADGSMVWA 3737

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+KV   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 3738 FGDGDY--GKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3794

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P++V  L G+    V+ G  HT A+               S G ++
Sbjct: 3795 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL--------------ASTGDVY 3840

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 3841 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 3900

Query: 499  GQLGVPVA 506
             QLG+P A
Sbjct: 3901 LQLGLPDA 3908



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 366 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 420

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 471

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 472 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 583

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +++ L+   +++V  G    L  T+   ++ W
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 636



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 437 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 492

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 493 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 547

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 548 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 603

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 604 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 661

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 662 ATRIVDISIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 707

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 708 KKVSGLDGIAIQQISAGTSHSLAWT 732



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 420

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 421 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 468

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 469 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 571



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 559 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 609

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 610 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 667

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 668 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 724

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 725 TSHSLAWTA 733


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 28/350 (8%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +IACG  H V+VT+ G +F++G    G+LG G     + P  ++ L    +  VA G 
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
           +HT AVT S  LY++G G+   G LGHG +    +P  +  +L+   ++ I+CG +H+A 
Sbjct: 97  FHTLAVTDSNKLYSFGQGS--EGALGHGDETDLNMPTSIE-SLEDKDVNIIACGGYHSAA 153

Query: 366 VTSAGHLFTFGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +T  G L+ +G  S G LG   D IS     ++    G     V+CG +HTA V      
Sbjct: 154 ITKNGELYIWGSNSEGQLGLKNDTISYPTMLDL----GKSVISVACGYYHTAVV------ 203

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVA 483
                   T+ GKL+T+G+ + G+LG GD E  ++    V   I   + +VACG + +VA
Sbjct: 204 --------TADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVA 255

Query: 484 LTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           LT SG VYT GS   GQLG+   + D  +P  V+  +++  ++ +ACG  H A ++   +
Sbjct: 256 LTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA-LSKRKIKHIACGESHTAVVSDKGE 314

Query: 542 VYTWGKGANGQLGHGDKDNRN--SPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           ++T+G G +G+LG GD+   N   P  V  LK+  V  + CG   T + C
Sbjct: 315 LFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVAC 364



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 178/347 (51%), Gaps = 41/347 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     + ++A G  H + VT   +++S+G+ S G LGHG E D++ P  IE L 
Sbjct: 78  PTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLE 137

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHL 353
             +V ++ACG YH+ A+T++G+LY W  G+ + G LG  +    +        LD G  +
Sbjct: 138 DKDVNIIACGGYHSAAITKNGELYIW--GSNSEGQLGLKNDTISYPTM-----LDLGKSV 190

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCG 411
             ++CG +HTAVVT+ G L+TFG+   G LG GD  +  +  P+ V+ + G +  +V+CG
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACG 249

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECVAPLIDEN 470
             HT A+              T+ G+++T+G G  G+LG G K      P+ V  L    
Sbjct: 250 GNHTVAL--------------TASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRK 295

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVA 527
           I  +ACG   +  ++  G ++T G   +G+LG      ++   P +V   + E  V  +A
Sbjct: 296 IKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQ-RLKEFIVLHIA 354

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT-LVDFLKDK 573
           CG  H   + + +K+         +L +GD DN +S    VDF K K
Sbjct: 355 CGGCHT--IVACNKI--------DKLANGDDDNESSSNDEVDFGKTK 391



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 151/279 (54%), Gaps = 34/279 (12%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ +G+G + G LG G+         +TD  +P ++ES    DV+ IACG  H+  +TK 
Sbjct: 108 LYSFGQG-SEGALGHGD---------ETDLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE++ WG  S G+LG   +  +S+P ++++  G +V  VACG YHT  VT  G LYT+G+
Sbjct: 158 GELYIWGSNSEGQLGLKNDT-ISYPTMLDL--GKSVISVACGYYHTAVVTADGKLYTFGE 214

Query: 323 GTYNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                G LG G   +  + + KV   + G  +  ++CG  HT  +T++G ++TFG G  G
Sbjct: 215 --TEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNG 271

Query: 382 ALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG G  I  ++IP+ VE L   +   ++CG  HTA V              +  G+LFT
Sbjct: 272 QLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV--------------SDKGELFT 317

Query: 441 WGDGDKGRLGHGDKE-PRLF-PECVAPLIDENICQVACG 477
           +GDG  G+LG GD+    LF P  V  L +  +  +ACG
Sbjct: 318 FGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACG 356



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 16/166 (9%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G +FT+G   K R G  D     F      +  + +  +ACG + +V +T +G ++T G+
Sbjct: 12  GAVFTFG---KSRFG--DNRTNKFW-----IRSDKVTDIACGDEHTVVVTENGRLFTFGN 61

Query: 496 AAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
             +GQLG+        PT V     E  +  VA G +H  A+T ++K+Y++G+G+ G LG
Sbjct: 62  NEWGQLGIGSNKTRNKPTTVKALKPEK-ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALG 120

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSS 596
           HGD+ + N PT ++ L+DK V  + CG   +A I     L+ W S+
Sbjct: 121 HGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSN 166


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 193/367 (52%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D  +P  + S     V ++ CGA H +  +  + +
Sbjct: 45  WGRG-EDGQLGHGDSE---------DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQ 94

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +DV +PQ I  L G+ ++ +ACG+ H   VT +G +++WG   
Sbjct: 95  LYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWG--R 152

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +G+ +  I+ G  HT  +T  G L+ +G G +G LG
Sbjct: 153 NQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLG 211

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
             D    S+P +V ++ G +   V+CG  H+ +V              +S G L+T+G  
Sbjct: 212 LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV--------------SSSGALYTYGWS 257

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+LGHGD +  L P  +  L D  I Q++ G   ++A+   G +Y  G   +GQ+GV 
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVE 317

Query: 505 -VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P  V+    +  V+ VACG  H  ALT    +++WG+GA+GQLGHG+  +RN+
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQ-VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNT 376

Query: 564 PTLVDFL 570
           P ++D L
Sbjct: 377 PKMIDAL 383



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 169/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H  A+ D D +  ++ WG G           R+G+  S  +D   P+ + +
Sbjct: 75  VTSVICGADHTIAYSD-DEM-QLYSWGWGDFG--------RLGHGNS--SDVFNPQPIVA 122

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  IACG  H + VT  G++ SWG    G+LG G   D   PQ I+   GV V++
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKM 182

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT A+T  GDLY WG G Y  G LG   +    +P KVS +++G  +  ++CG 
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRY--GNLGLSDRDDRSVPEKVS-SVEGEKMVLVACGW 239

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  V+S+G L+T+G   +G LGHGD     +PR++E L+ +  +++S G  HT A  V
Sbjct: 240 RHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMA--V 297

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A D            GKL+ WG    G++G  D      P  V    ++ I QVACG   
Sbjct: 298 AED------------GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRH 345

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++ALT + ++++ G  A GQLG
Sbjct: 346 TLALTENKNIFSWGRGASGQLG 367



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 57/427 (13%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
           +V L++ G  H+ A+     + +WG G    G LGHG      +P  ++ + D   ++ +
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRG--EDGQLGHGDSEDRPVPTVLT-SFDVPRVTSV 78

Query: 357 SCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            CG  HT A       L+++G G FG LGHG+      P+ +  L+G++  +++CG  H 
Sbjct: 79  ICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC 138

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC--Q 473
             V              T  G++ +WG    G+LG G+ +  L P+ +     E +C   
Sbjct: 139 LTV--------------TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKM 182

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYH 532
           +A G + + A+T  G +Y  G   YG LG+   D   VP +V     E  V  VACG  H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL-VACGWRH 241

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
             +++S+  +YT+G    GQLGHGD  +   P  ++ LKD  + ++  G   T  +    
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAV---- 297

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
              + D  +     N FG      N  +C  V       +K ++ A        +R    
Sbjct: 298 ---AEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACG------WR---- 344

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
               L  T+ K        ++    R  +G + H   E+ DR    P++ D LS+  S  
Sbjct: 345 --HTLALTENK--------NIFSWGRGASGQLGH--GEIIDRNT--PKMIDALSLDGS-- 388

Query: 713 SNKQTES 719
           + KQ ES
Sbjct: 389 ACKQLES 395



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           E  E  V  ++ GA H AAL S   V +WG+G +GQLGHGD ++R  PT++      +V 
Sbjct: 17  EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVT 76

Query: 577 RVVCGLNFT 585
            V+CG + T
Sbjct: 77  SVICGADHT 85



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           +ACG RH + +T+   IFSWG  + G+LGHG   D + P++I+ LS
Sbjct: 339 VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/385 (35%), Positives = 193/385 (50%), Gaps = 41/385 (10%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DV++WG G           R G       + ++P A  S        + CG     ++  
Sbjct: 3997 DVYLWGAG-----------RHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQA 4043

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      P +      G  +  +SCG  H+AVVTS G LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPXQ------GEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G+  +  +P  V  L G +  +V+CG+ HT AV         S  GS     +
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SADGSM----V 4202

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            + +GDGD G+LG G+   +  P+ +  L    I +VACG   SVALT  GHVYT G    
Sbjct: 4203 WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4262

Query: 499  GQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
              +G+P        R      +A   +E+VA GA H  AL S   VY WG  + GQLG G
Sbjct: 4263 --IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4320

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++   PTLV  L+ K V+++  G
Sbjct: 4321 HTNHVREPTLVTGLQGKNVRQISAG 4345



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 35/329 (10%)

Query: 264  EIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +++ WG    GR G   EA  +V  P      S    + V CG+  T  +  +G +   G
Sbjct: 3997 DVYLWG---AGRHGQLAEAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACG 4051

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 4052 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHG+       R+    +G    ++SCG  H+A V              TS GKL
Sbjct: 4109 DYGKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVV--------------TSDGKL 4149

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAA 497
            FT+G+GD GRLG G+   +  PE V  L    I QVACG + ++A++  G  V+  G   
Sbjct: 4150 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4209

Query: 498  YGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            YG+LG+  +     P ++D  +    +++VACG     ALT    VYT+G+     L  G
Sbjct: 4210 YGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4268

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               N N P  +  L    ++ V  G   T
Sbjct: 4269 RARNHNRPQQIPVLAGVIIEDVAVGAEHT 4297



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 34/306 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P   E     +V  ++CG +H+ +VT
Sbjct: 4100 GEVFSWGDG-DYGKLGHGNS------DRQRR---PXQGE-----EVVQMSCGFKHSAVVT 4144

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL-YT 319
              G++F++G    GRLG G  ++   P+ +  L G  +  VACG  HT AV+  G + + 
Sbjct: 4145 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWA 4204

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            +GDG Y  G LG G+  +   P+K+   L GI +  ++CG   +  +T  GH++TFG   
Sbjct: 4205 FGDGDY--GKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4261

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
               L  G   + + P+++  L G+    V+ G  HT A+               S G ++
Sbjct: 4262 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------------ASNGDVY 4307

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG-HVYTMGSAAY 498
             WG   +G+LG G       P  V  L  +N+ Q++ G   S A T         G +  
Sbjct: 4308 AWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVP 4367

Query: 499  GQLGVP 504
             QLG+P
Sbjct: 4368 LQLGLP 4373



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 139/281 (49%), Gaps = 37/281 (13%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            D+Y WG G +  G L    + +  +P              + CG   T V+ + G +   
Sbjct: 3997 DVYLWGAGRH--GQLAEAGR-NVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLAC 4050

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV-WHTAAVVVATDSSSSSPSGS 432
            G+GS+G LG G+     +   +  L+G   T++  SCG   H+ A+              
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMAL-------------- 4096

Query: 433  TSCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
            T  G++F+WGDGD G+LGHG  D++ R       P   E + Q++CG   S  +T+ G +
Sbjct: 4097 TESGEVFSWGDGDYGKLGHGNSDRQRR-------PXQGEEVVQMSCGFKHSAVVTSDGKL 4149

Query: 491  YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST-SKVYTWGK 547
            +T G+  YG+LG+   ++  +P RV     E + + +VACG  H  A+++  S V+ +G 
Sbjct: 4150 FTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4207

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G  G+LG G+   ++SP  +D L    +K+V CG  F+  +
Sbjct: 4208 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4248



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 194/378 (51%), Gaps = 20/378 (5%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIF 266
            G G+ +G+  G  HR                 ++  AL    I  G +    +T  G+++
Sbjct: 3617 GSGVIHGW--GHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVY 3674

Query: 267  SWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGT 324
            + G  +GGRLG G    VS P LIE L  V V  VA   G  H  A+T SGD+++WG+G 
Sbjct: 3675 ATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEG- 3733

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             + G LGHGSK  C  P+ +  +L   H+  ++CG  H+A +T++G L+T+G G +G LG
Sbjct: 3734 -DDGKLGHGSKALCERPKLIE-SLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLG 3791

Query: 385  HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            HGD      P++VE L G     V+CG      + V+ D            G +++WGDG
Sbjct: 3792 HGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRD------------GLVWSWGDG 3839

Query: 445  DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
            D G+LG G  +   FP+ +  L +  + +V CG   SVALT +G VYT G   Y +LG  
Sbjct: 3840 DYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHG 3899

Query: 505  VADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D +  P  V G +    V +VA G+ H  A T + +V+TWG    GQLG G  +    
Sbjct: 3900 SEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQR 3959

Query: 564  PTLVDFLKDKQVKRVVCG 581
            P LV  LK K++ RV CG
Sbjct: 3960 PKLVASLKGKKMNRVACG 3977



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 195/381 (51%), Gaps = 29/381 (7%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
            VF+WG       L   +   G   S+  +   PK  E    L   NIA G++   +V+  
Sbjct: 2654 VFVWG-------LNDKDQLGGLKGSKIKE---PKFSEVISNLKPMNIAGGSKSLFIVSHD 2703

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTW 320
            G++F+ GE + GRLG G   +V+ P+ +  LS   ++ VA   G  H  A+T  G +++W
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            G+G    G LGHG+K+S   P+ V  +L    +  ++CG  H+A VTS+G L+T+G G +
Sbjct: 2764 GEG--EDGKLGHGNKISYDRPKLVE-SLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEY 2820

Query: 381  GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            G LGHGD++    P++V  L   R  +V+CG            S  +     T    +++
Sbjct: 2821 GRLGHGDNVPQLKPKQVRALSHERVVQVACG------------SRDAQTLALTERHWVYS 2868

Query: 441  WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
            WGDGD G+LG G  +    P+ V  L  + + QV CG   S+AL+ +G V+T G   Y +
Sbjct: 2869 WGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFR 2928

Query: 501  LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            LG      +   +V  E+A+  V +V+ GA H  A+T   +VY WG   +GQ G+G+   
Sbjct: 2929 LGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTV 2988

Query: 561  RNSPTLVDFLKDKQVKRVVCG 581
               P +V  L  + +  V CG
Sbjct: 2989 NRKPAIVRGL--EAITNVACG 3007



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 168/346 (48%), Gaps = 39/346 (11%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAV 257
            G VF  GEG  NG LG G  H V            PK +       +  +A   G RHA+
Sbjct: 2704 GKVFACGEG-TNGRLGLGHSHNVAQ----------PKPLTDLSPYFIKKVAVHSGGRHAL 2752

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
             +T  G +FSWGE   G+LGHG +     P+L+E L    +  VACG  H+ AVT SG+L
Sbjct: 2753 ALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGEL 2812

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTF 375
            YTWG G Y  G LGHG  V    P++V   L    +  ++CG     T  +T    ++++
Sbjct: 2813 YTWGSGEY--GRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHWVYSW 2869

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            GDG FG LG G    +S+P+ VETL   +  +V CG   + A+              +  
Sbjct: 2870 GDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL--------------SKN 2915

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            GK++TWG GD  RLGHG      +P+ V  L D+N+ QV+ G    +A+T  G VY  G 
Sbjct: 2916 GKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGD 2975

Query: 496  AAYGQLGVPVADGLVPTRVDGEIAESF--VEEVACGAYHVAALTST 539
              +GQ G    +G         I      +  VACG+ H  A +ST
Sbjct: 2976 NDHGQQG----NGNTTVNRKPAIVRGLEAITNVACGSSHSVAWSST 3017



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 23/323 (7%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++F WG     +LG  + + +  P+  E++S +    +A G      V+  G ++  G+G
Sbjct: 2653 KVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEG 2712

Query: 324  TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFG 381
            T     LGH   V+   P+ ++ +L    +  ++   G  H   +T  G +F++G+G  G
Sbjct: 2713 TNGRLGLGHSHNVA--QPKPLT-DLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHG+ IS   P+ VE+L+  R   V+CG  H+AAV              TS G+L+TW
Sbjct: 2770 KLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAV--------------TSSGELYTW 2815

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYG 499
            G G+ GRLGHGD  P+L P+ V  L  E + QVACG     ++ALT    VY+ G   +G
Sbjct: 2816 GSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFG 2875

Query: 500  QLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG   +DG  +P  V+   ++  + +V CGA    AL+   KV+TWGKG   +LGHG  
Sbjct: 2876 KLGKGGSDGSSLPQNVETLNSQQVI-QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSD 2934

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
             +   P +V+ L DK V +V  G
Sbjct: 2935 SHVRWPQVVEELADKNVIQVSVG 2957



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 164/316 (51%), Gaps = 30/316 (9%)

Query: 175  ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
            ET +  + + V+ +S G       S GDVF WGEG  +G LG G   +            
Sbjct: 3699 ETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEG-DDGKLGHGSKALCER--------- 3748

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            PK +ES     V ++ACG  H+  +T  GE+++WG+   GRLGHG   D   P+ +E L+
Sbjct: 3749 PKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELA 3808

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            G NV  VAC  G+  T  V+R G +++WGDG Y  G LG G    C  P+K+  +L    
Sbjct: 3809 GHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY--GKLGRGGSDGCKFPQKID-SLQNAG 3865

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCG 411
            +  + CG   +  +T+AG ++T+G G +  LGHG       P+ V+  L+G R  +V+ G
Sbjct: 3866 VIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVG 3925

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
              H  A    TDS           G++FTWGD D+G+LG G       P+ VA L  + +
Sbjct: 3926 SLHCVA---CTDS-----------GEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKM 3971

Query: 472  CQVACGHDLSVALTTS 487
             +VACG   +V+ +TS
Sbjct: 3972 NRVACGSAHTVSWSTS 3987



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 161/312 (51%), Gaps = 23/312 (7%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +E+   + V  +A   G +H + +T  G++FSWGE   G+LGHG +A    P+LIE 
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L   +V  VACG  H+  +T SG+LYTWG G Y  G LGHG       P+KV   L G +
Sbjct: 3755 LRDKHVVSVACGGAHSACITASGELYTWGKGRY--GRLGHGDSEDQLKPKKVE-ELAGHN 3811

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  V+  G ++++GDG +G LG G       P+++++L+     +V C
Sbjct: 3812 VLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVEC 3871

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDE 469
            G   + A+              T+ G ++TWG GD  RLGHG ++    P+ V   L  +
Sbjct: 3872 GSQFSVAL--------------TAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGK 3917

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             + QVA G    VA T SG V+T G    GQLG    + +   ++   +    +  VACG
Sbjct: 3918 RVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACG 3977

Query: 530  AYHVAALTSTSK 541
            + H  +  STSK
Sbjct: 3978 SAHTVSW-STSK 3988



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 138/277 (49%), Gaps = 29/277 (10%)

Query: 317  LYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            ++ WG  D     GL   GSK+      +V  NL  ++++  S  L+   +V+  G +F 
Sbjct: 2654 VFVWGLNDKDQLGGL--KGSKIKEPKFSEVISNLKPMNIAGGSKSLF---IVSHDGKVFA 2708

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G+G+ G LG G   + + P+ +  L      +V+       A+ +  D           
Sbjct: 2709 CGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTID----------- 2757

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G++F+WG+G+ G+LGHG+K     P+ V  L  + I  VACG   S A+T+SG +YT G
Sbjct: 2758 -GRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWG 2816

Query: 495  SAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKG 548
            S  YG+LG    VP    L P +V   ++   V +VACG+      ALT    VY+WG G
Sbjct: 2817 SGEYGRLGHGDNVP---QLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHWVYSWGDG 2872

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
              G+LG G  D  + P  V+ L  +QV +V CG  F+
Sbjct: 2873 DFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFS 2909



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG ++ WG    + G LG   G+KV       +   L  +    I  G      +TS G 
Sbjct: 3618 SGVIHGWGHN--HRGQLGGVEGAKVKT---ATICDALTALRPVQIVGGEQTLFALTSDGK 3672

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S S P  +ETL+            H     VA +S       
Sbjct: 3673 VYATGYGAGGRLGIGGTESVSTPTLIETLQ------------HVIVTQVAVNSGGKHCLA 3720

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             TS G +F+WG+GD G+LGHG K     P+ +  L D+++  VACG   S  +T SG +Y
Sbjct: 3721 LTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELY 3780

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK--VYTWGKG 548
            T G   YG+LG     D L P +V+ E+A   V +VACG+     L  +    V++WG G
Sbjct: 3781 TWGKGRYGRLGHGDSEDQLKPKKVE-ELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDG 3839

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L++  V +V CG  F+  +
Sbjct: 3840 DYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVAL 3879



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 2/162 (1%)

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTTSGHV 490
            TS GK++  G G  GRLG G  E    P  +  L    + QVA   G    +ALT+SG V
Sbjct: 3668 TSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDV 3727

Query: 491  YTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
            ++ G    G+LG          ++   + +  V  VACG  H A +T++ ++YTWGKG  
Sbjct: 3728 FSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRY 3787

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            G+LGHGD +++  P  V+ L    V  V CG      +C+ +
Sbjct: 3788 GRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSR 3829


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 194/367 (52%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ-GE 264
           WG G  +G LG G+           D L P  + +    +V ++ CGA H    ++   +
Sbjct: 40  WGRG-EDGQLGHGD---------AEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQ 89

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I+ L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 90  VYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWG--R 147

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  HTA VT  G L+ +G G +G LG
Sbjct: 148 NQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLG 206

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P +V T+ G++  +V+CG  HT +V              +S G L+T+G  
Sbjct: 207 LGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV--------------SSSGGLYTYGWS 252

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHGD E  L P  +  L +  I +++ G   ++ALT+ G +Y  G   +GQ+GV 
Sbjct: 253 KYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 312

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     E  V  ++CG  H  A+T    V++WG+G NGQLGHG+  +RN 
Sbjct: 313 DNVDHCSPVQVKFP-HEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNI 371

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 372 PKMIEVL 378



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 176/342 (51%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  V  V CG  HT
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S   +Y+WG G +  G LGHG+    + P+ +   L G+ +  I+CG  H   VT
Sbjct: 81  TAYSESFTQVYSWGWGDF--GRLGHGNSSDLFTPQPIKA-LHGLRIKQIACGDSHCLAVT 137

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++  +G+    V+ G  HTAAV         
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV--------- 188

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  RL PE V+ +    + +VACG   ++++++S
Sbjct: 189 -----TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSS 243

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D L P +++  + E+ + E++ G  H  ALTS  K+Y WG
Sbjct: 244 GGLYTYGWSKYGQLGHGDFEDHLTPHKLE-ALQENLISEISGGWRHTMALTSDGKLYGWG 302

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +  SP  V F  +++V  + CG   T  +
Sbjct: 303 WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAV 344



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 163/320 (50%), Gaps = 29/320 (9%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           SV   + H +A+ +  S   V+ WG G           R+G+  S  +D   P+ +++  
Sbjct: 72  SVTCGADHTTAYSE--SFTQVYSWGWGDFG--------RLGHGNS--SDLFTPQPIKALH 119

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
            L +  IACG  H + VT  GE+ SWG    G+LG G   D   PQ I+   GV+V++VA
Sbjct: 120 GLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVA 179

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  HT AVT  G+LY WG G Y  G LG G +    +P KVS  ++G+ +  ++CG  H
Sbjct: 180 AGAEHTAAVTEDGELYGWGWGRY--GNLGLGDRNDRLVPEKVS-TVEGVKMVKVACGWRH 236

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T  V+S+G L+T+G   +G LGHGD      P ++E L+    + +S G  HT A+    
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMAL---- 292

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     TS GKL+ WG    G++G GD      P  V    ++ +  ++CG   ++
Sbjct: 293 ----------TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 342

Query: 483 ALTTSGHVYTMGSAAYGQLG 502
           A+T   +V++ G    GQLG
Sbjct: 343 AVTERQNVFSWGRGTNGQLG 362



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D   P  V+      V +I+CG RH + VT++  +FSWG  + G+LGHG   D + P++
Sbjct: 315 VDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKM 374

Query: 290 IEILS 294
           IE+LS
Sbjct: 375 IEVLS 379


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 193/367 (52%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D  +P  + S     V ++ CGA H +  +  + +
Sbjct: 45  WGRG-EDGQLGHGDSE---------DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQ 94

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +DV +PQ I  L G+ ++ +ACG+ H   VT +G +++WG   
Sbjct: 95  LYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWG--R 152

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +G+ +  I+ G  HT  +T  G L+ +G G +G LG
Sbjct: 153 NQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLG 211

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
             D    S+P +V ++ G +   V+CG  H+ +V              +S G L+T+G  
Sbjct: 212 LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV--------------SSSGALYTYGWS 257

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+LGHGD +  L P  +  L D  I Q++ G   ++A+   G +Y  G   +GQ+GV 
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVE 317

Query: 505 -VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P  V+    +  V+ VACG  H  ALT    +++WG+GA+GQLGHG+  +RN+
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQ-VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNT 376

Query: 564 PTLVDFL 570
           P ++D L
Sbjct: 377 PKMIDAL 383



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 30/336 (8%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H  A+ D D +  ++ WG G           R+G+  S  +D   P+ + +
Sbjct: 75  VTSVICGADHTIAYSD-DEM-QLYSWGWGDFG--------RLGHGNS--SDVFNPQPIVA 122

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  IACG  H + VT  G++ SWG    G+LG G   D   PQ I+   GV V++
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKM 182

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT A+T  GDLY WG G Y  G LG   +    +P KVS +++G  +  ++CG 
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRY--GNLGLSDRDDRSVPEKVS-SVEGEKMVLVACGW 239

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  V+S+G L+T+G   +G LGHGD     +PR++E L+ +  +++S G  HT A  V
Sbjct: 240 RHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMA--V 297

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A D            GKL+ WG    G++G  D      P  V    ++ I QVACG   
Sbjct: 298 AED------------GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRH 345

Query: 481 SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
           ++ALT + ++++ G  A GQLG   + D   P  +D
Sbjct: 346 TLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMID 381



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 57/427 (13%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
           +V L++ G  H+ A+     + +WG G    G LGHG      +P  ++ + D   ++ +
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRG--EDGQLGHGDSEDRPVPTVLT-SFDVPRVTSV 78

Query: 357 SCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            CG  HT A       L+++G G FG LGHG+      P+ +  L+G++  +++CG  H 
Sbjct: 79  ICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC 138

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC--Q 473
             V              T  G++ +WG    G+LG G+ +  L P+ +     E +C   
Sbjct: 139 LTV--------------TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKM 182

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYH 532
           +A G + + A+T  G +Y  G   YG LG+   D   VP +V     E  V  VACG  H
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL-VACGWRH 241

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
             +++S+  +YT+G    GQLGHGD  +   P  ++ LKD  + ++  G   T  +    
Sbjct: 242 SVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAV---- 297

Query: 593 WVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDD 652
              + D  +     N FG      N  +C  V       +K ++ A        +R    
Sbjct: 298 ---AEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACG------WR---- 344

Query: 653 CFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFD 712
               L  T+ K        ++    R  +G + H   E+ DR    P++ D LS+  S  
Sbjct: 345 --HTLALTENK--------NIFSWGRGASGQLGH--GEIIDRNT--PKMIDALSLDGS-- 388

Query: 713 SNKQTES 719
           + KQ ES
Sbjct: 389 ACKQLES 395



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           E  E  V  ++ GA H AAL S   V +WG+G +GQLGHGD ++R  PT++      +V 
Sbjct: 17  EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVT 76

Query: 577 RVVCGLNFT 585
            V+CG + T
Sbjct: 77  SVICGADHT 85



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           +ACG RH + +T+   IFSWG  + G+LGHG   D + P++I+ LS
Sbjct: 339 VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 191/387 (49%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E   G          LP   ES  AL    +A G +  
Sbjct: 3928 WDGSGAIYGWGHN-HRGQLGGLE---GAKIK------LPAPCESLSALRPIQLAGGEQTL 3977

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G+++S G  + GRLG G    V  P L+E +  V ++ VA   G  H  A++  
Sbjct: 3978 FAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++S   P+ V  +L GI +  I+CG  H+A +TSAG L+T
Sbjct: 4038 GHVYSWGEG--DDGKLGHGNRLSYDRPKLVE-DLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4145

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G
Sbjct: 4146 ---VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWG 4202

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A +   +V+TWG    GQLG
Sbjct: 4203 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4262

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4263 DGTTSALQRPRLVHALQGKKITRVACG 4289



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 186/352 (52%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            +P   E    L   +IA G++   +V+++G++++ GE + GRLG G + ++  P+LI  L
Sbjct: 2974 IPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFL 3033

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+  +   PR +  +L   
Sbjct: 3034 SQYVIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNCTTLDKPRLIE-SLKSK 3090

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A + S G L+T+G G +G LGHGD  +   P+ V+ L G R  +V+CG
Sbjct: 3091 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACG 3150

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        S  +     T+ G ++TWGDGD G+LG G  +    P  V  L    +
Sbjct: 3151 ------------SRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV 3198

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             QV CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  V  VA G
Sbjct: 3199 VQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKIVH-VAVG 3256

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L D ++ RV CG
Sbjct: 3257 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCG 3308



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 164/336 (48%), Gaps = 25/336 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  + G+   G   +G + S     ++P  +ES   + +  +A   G +H + ++ +G 
Sbjct: 3984 GKVYSTGYGAAGRLGIGGTDS----VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGH 4039

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+L+E L G+ +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4040 VYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGR 4099

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4100 Y--GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4156

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      +P ++++L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4157 LGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL--------------TRSGAVYTWG 4202

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA +  G V+T G    GQLG
Sbjct: 4203 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4262

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
                  L   R+   +    +  VACG+ H  A ++
Sbjct: 4263 DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4298



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 25/334 (7%)

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +Q  ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3008

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G +F++G+G 
Sbjct: 3009 GEGT--NGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3066

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+  +   PR +E+L+  R   ++CG  H+AA+               S G+L+
Sbjct: 3067 DGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAI--------------ASNGELY 3112

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   ++ P+ V  L  + + QVACG     +++LT  G VYT G   
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGD 3172

Query: 498  YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +G+LG   +DG   P  VD  +    V +V CGA    ALT   +V+TWGKG   +LGHG
Sbjct: 3173 FGKLGRGGSDGCYTPLLVD-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3231

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +  +   PTLV+ L+ K++  V  G    A+ CL
Sbjct: 3232 NDHHVRKPTLVEGLRGKKIVHVAVG----ALHCL 3261



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 138/250 (55%), Gaps = 19/250 (7%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           +H + +T+ G ++SWG   GGRLGHG       P+LIE L   N+  +ACG  ++ A++ 
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSA 578

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW--HTAVVTSAGH 371
           SG+LYTWG G Y  G LGHGS     +P  V+  L G  + +++CG     T  VT++G 
Sbjct: 579 SGELYTWGRGNY--GRLGHGSNDDVTVPTLVT-TLKGHMVVHVACGSGDSQTLCVTASGI 635

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           +F++GDG +G LG G    +  P+ V+ L  +   RV CG   +AA+             
Sbjct: 636 VFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAAL------------- 682

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T+ G+++TWG GD  RLGHG++E   +P+ +  L D+ I  ++ G    +ALT    VY
Sbjct: 683 -TARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVY 741

Query: 492 TMGSAAYGQL 501
             G   YGQ+
Sbjct: 742 GWGRNDYGQI 751



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 164/339 (48%), Gaps = 31/339 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+    Y+         PK +       +  +A   G +HA+ 
Sbjct: 3003 GKLYACGEG-TNGRLGLGDD---YNMCE------PKLIPFLSQYVIKKVAVHSGGKHALA 3052

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+  +G+LY
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELY 3112

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T+ G ++T+G
Sbjct: 3113 TWGLGEY--GRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSLTADGCVYTWG 3169

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  V+ L GL   +V CG   + A+              T  G
Sbjct: 3170 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLAL--------------TKYG 3215

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + I  VA G    +A+T +G VY  G  
Sbjct: 3216 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3275

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             +GQ G           +  E+ ++ +  V+CG+ H  A
Sbjct: 3276 DHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIA 3314



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 181/399 (45%), Gaps = 50/399 (12%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G      S+ R      PK VE  + +
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHGNR---LSYDR------PKLVEDLLGI 4071

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+++E L    V  VAC 
Sbjct: 4072 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4131

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4132 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPLKID-SLAGLGVIKVECGSQF 4188

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4189 SVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4244

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      +  G++FTWGD D+G+LG G       P  V  L  + I +VACG     
Sbjct: 4245 ----------SDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACG----- 4289

Query: 483  ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD--GEIAESFVEEVACGAYHVAALTSTS 540
                S H     +A   Q  +P +    P   D   EI  S +       +H A L   +
Sbjct: 4290 ----SAHTLAWSTAKATQSRMPAS---APMEYDLVKEIPFSVLRNRLVLLHHFAELLCPA 4342

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
                   G  G        ++  P LV  +K+   ++VV
Sbjct: 4343 LAMFPTTGPTGL-------DKLGPMLVYTIKEATFRKVV 4374



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 177/361 (49%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L + ++ C  R  ++++  G ++         + +G E    +PQ +   S
Sbjct: 456 PFYCDAIAELGIKHLCCTERALLILSLSGNVYI--------MYYGSET--QYPQRMHSFS 505

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              V ++A      H  A+T+ G +Y+WG+G  + G LGHG  +S   P+ +   L+  +
Sbjct: 506 DKPVTMIASHSDGKHYLALTQDGCVYSWGNG--DGGRLGHGDNISHDEPKLIETLLEK-N 562

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + +I+CG  ++A ++++G L+T+G G++G LGHG +   ++P  V TL+G     V+CG 
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACG- 621

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                      S  S     T+ G +F+WGDGD G+LG G  +    P+ V  L+D N+ 
Sbjct: 622 -----------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVV 670

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   ++   + +  +++++ G  H
Sbjct: 671 RVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTH 730

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           + ALT    VY WG+   GQ+        + P+L   L  K V  +  G   +   C+  
Sbjct: 731 ILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCMSA 790

Query: 593 W 593
           W
Sbjct: 791 W 791



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 41/323 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG   G + G+G     S P   + ++ + ++ + C E     ++ SG++Y    G
Sbjct: 441 EVLAWG---GVKFGNG-----SSPFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYG 492

Query: 324 T---YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           +   Y   +     K    I     G               H   +T  G ++++G+G  
Sbjct: 493 SETQYPQRMHSFSDKPVTMIASHSDGK--------------HYLALTQDGCVYSWGNGDG 538

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHGD+IS   P+ +ETL       ++CG  ++AA+              ++ G+L+T
Sbjct: 539 GRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAAL--------------SASGELYT 584

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAY 498
           WG G+ GRLGHG  +    P  V  L    +  VACG     ++ +T SG V++ G   Y
Sbjct: 585 WGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           G+LG   +DG    ++  ++ +  V  V CG    AALT+  +VYTWGKG   +LGHG++
Sbjct: 645 GKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNE 704

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
           ++   P L++ L+DK++K +  G
Sbjct: 705 EHVRYPKLIESLRDKKIKDLSVG 727



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    I +  +     H +A     S G ++ WG+G   G LG G+      
Sbjct: 4058 SYDRPKLVEDLLGIEIVDIACGGHHSAA---ITSAGWLYTWGKG-RYGRLGHGD------ 4107

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+     V ++ACG+  A  + VT    ++SWG+   G+LG G    
Sbjct: 4108 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4164

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  I+ L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      PRK
Sbjct: 4165 CKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHR--LGHGTDDHVRRPRK 4222

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    +  G +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 4223 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGK 4281

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            + TRV+CG  HT A   A  + S  P+ +
Sbjct: 4282 KITRVACGSAHTLAWSTAKATQSRMPASA 4310



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 150/312 (48%), Gaps = 37/312 (11%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++++S S G  +      G V+ WG G       GG  R+G+  +   D   PK +E+ +
Sbjct: 510 TMIASHSDGKHYLALTQDGCVYSWGNG------DGG--RLGHGDNISHDE--PKLIETLL 559

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             ++  IACG+ ++  ++  GE+++WG  + GRLGHG   DV+ P L+  L G  V  VA
Sbjct: 560 EKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVA 619

Query: 303 C--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           C  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I++  + CG 
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGDY--GKLGRGGSDGSKTPKIVDKLLD-INVVRVFCGG 676

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T+ G ++T+G G    LGHG+      P+ +E+LR  +   +S G  H  A+  
Sbjct: 677 QFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILAL-- 734

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVAC 476
                       T    ++ WG  D G+    LG    EP L P     L  +N+  +A 
Sbjct: 735 ------------TEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPT----LSSKNVIGLAS 778

Query: 477 GHDLSVALTTSG 488
           G   S A   S 
Sbjct: 779 GPTQSFAWCMSA 790



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 119/275 (43%), Gaps = 67/275 (24%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WGEG  +G LG G           T    P+ +ES  +  + +IACG+ H+  + 
Sbjct: 3057 GKVFSWGEG-EDGKLGHGNC---------TTLDKPRLIESLKSKRIRDIACGSGHSAAIA 3106

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG    GRLGHG  A    P+L++ LSG  V  VACG  +  T ++T  G +Y
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVY 3166

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            TWGDG +  G LG G    C+ P  V   L+G+ +  + CG   +  +T  G ++T+G G
Sbjct: 3167 TWGDGDF--GKLGRGGSDGCYTPLLVD-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3223

Query: 379  SFGALGHGDHISTSIPREVETLRG------------------------------------ 402
             +  LGHG+      P  VE LRG                                    
Sbjct: 3224 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3283

Query: 403  ----------------LRTTRVSCGVWHTAAVVVA 421
                             R  RVSCG  H+ A ++ 
Sbjct: 3284 TTIVNRKPSLVHELDDTRMNRVSCGSSHSIAWILV 3318



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+K+    P +    L  I L+     L+    VT+ G 
Sbjct: 3931 SGAIYGWGHN--HRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLF---AVTADGK 3985

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +++ G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 3986 VYSTGYGAAGRLGIGGTDSVMVPTLLESIQ------------HVFIKKVAVNSGGKHCLA 4033

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ V  L+   I  +ACG   S A+T++G +Y
Sbjct: 4034 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLY 4093

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKGA 549
            T G   YG+LG   +D  +  +V   + +  V +VACG+     L  T    V++WG G 
Sbjct: 4094 TWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4153

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4154 YGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4192



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAV---------- 3980

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK+++ G G  GRLG G  +  + P  +  +    I +VA   G    +AL++
Sbjct: 3981 ----TADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  ++    + ++ACG +H AA+TS   +YTWG
Sbjct: 4037 EGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG 4096

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD D++  P +V+ L+D +V  V CG      +C+
Sbjct: 4097 KGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 12/168 (7%)

Query: 436  GKLFTWGDGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            GKL+  G+G  GRLG GD     EP+L P     +I +    V  G   ++ALT  G V+
Sbjct: 3003 GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKK--VAVHSGGKHALALTQDGKVF 3060

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            + G    G+LG      L   R+   +    + ++ACG+ H AA+ S  ++YTWG G  G
Sbjct: 3061 SWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYG 3120

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG------LNFTAIICLHKW 593
            +LGHGD   +  P LV  L  ++V +V CG      ++ TA  C++ W
Sbjct: 3121 RLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTW 3168



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+A G     A+T  G VY+ G 
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG+   D  +VPT ++  I   F+++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 3992 GAAGRLGIGGTDSVMVPTLLE-SIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4050

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++ + + P LV+ L   ++  + CG + +A I    W+
Sbjct: 4051 LGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWL 4092


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 190/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G +++V  P+ I  L
Sbjct: 2957 LPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 3016

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ V+   G  H  A+T+ G +++WG+G    G LGHG+ +S   PR +  +L   
Sbjct: 3017 SQYVIKKVSVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNSISLDKPRLIE-SLKSK 3073

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD  + S P+ V++L G R  +++CG
Sbjct: 3074 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACG 3133

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        S  +     T+ G +++WGDGD G+LG G  +    P  +  L    +
Sbjct: 3134 ------------SRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV 3181

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             Q+ CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  +  VA G
Sbjct: 3182 VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKVIH-VAVG 3239

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T   +VY WG   +GQ G+G       P+LV  L D +V RV CG
Sbjct: 3240 ALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCG 3291



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 187/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +  G +  
Sbjct: 3949 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPVLCESLSALRPVQLTGGEQTL 3998

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G++++ G  + GRLG G    V  P L+E +  V V+ VA   G  H  A++  
Sbjct: 3999 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4058

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++S   P+ +   L G  +  I+CG  H+A +TSAG L+T
Sbjct: 4059 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4115

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ +E L+  +   V+CG      + V  D +         
Sbjct: 4116 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4166

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG +YT G
Sbjct: 4167 ---VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWG 4223

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A T   +V+TWG    GQLG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4284 DGTTSALQRPRLVHALQGKKITRVACG 4310



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 170/330 (51%), Gaps = 25/330 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++ WG     +LG  + + +  P   E+LS +    +A G      V++ G LY  G+GT
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2995

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
              +G LG G   +   P+ +   L    +  +S   G  H   +T  G +F++G+G  G 
Sbjct: 2996 --NGRLGLGDDSNVCEPKPIPF-LSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ IS   PR +E+L+  R   ++CG  H+AA+              TS G+L+TWG
Sbjct: 3053 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI--------------TSSGELYTWG 3098

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G+ GRLGHGD   +  P+ V  L+ + I Q+ACG     ++ALT  G VY+ G   +G+
Sbjct: 3099 LGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGK 3158

Query: 501  LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            LG   +DG     +   +    V ++ CGA    ALT   +V+TWGKG   +LGHG+  +
Sbjct: 3159 LGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHH 3218

Query: 561  RNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               PTLV+ L+ K+V  V  G    A+ CL
Sbjct: 3219 VRKPTLVEGLRGKKVIHVAVG----ALHCL 3244



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 179/391 (45%), Gaps = 42/391 (10%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S     ++P  +ES   + V  +A   G +H + ++ +G 
Sbjct: 4005 GKVYATGYGAVGRLGIGGTDS----VMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 4060

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+LIE L G  +  +ACG +H+ A+T +G LYTWG G 
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ +   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4121 Y--GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4177

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      IP ++E+L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4178 LGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL--------------TRSGAIYTWG 4223

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA T  G V+T G    GQLG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                  L   R+   +    +  VACG+ H  A ++     +             K    
Sbjct: 4284 DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWSTMKATQS-------------KMPAT 4330

Query: 563  SPTLVDFLKDKQV----KRVVCGLNFTAIIC 589
            +P   D +KD        R+V   +F  ++C
Sbjct: 4331 TPMEYDLVKDLPFPVLHNRLVLLHHFAELLC 4361



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 168/345 (48%), Gaps = 31/345 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE--STMALDVHNIACGARHAVL 258
            G ++  GEG  NG LG G+          ++   PK +   S   +   ++  G +HA+ 
Sbjct: 2986 GKLYACGEG-TNGRLGLGD---------DSNVCEPKPIPFLSQYVIKKVSVHSGGKHALA 3035

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LY
Sbjct: 3036 LTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3095

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V  +L G  +  I+CG     T  +T+ G ++++G
Sbjct: 3096 TWGLGEY--GRLGHGDTATQSKPKLVQ-SLVGQRIIQIACGSRDAQTMALTADGLVYSWG 3152

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  ++ L GL   ++ CG   + A+              T  G
Sbjct: 3153 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL--------------TKYG 3198

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + +  VA G    +A+T  G VY  G  
Sbjct: 3199 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDN 3258

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             +GQ G           +  E+ ++ V  V+CG+ H  A   T +
Sbjct: 3259 DHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3303



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 155/306 (50%), Gaps = 33/306 (10%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G      S+ R      PK +E  +  
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHGNR---LSYDR------PKLIEELLGT 4092

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+LIE L    V  VACG
Sbjct: 4093 EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 4152

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C IP K+  +L G+ +  + CG   
Sbjct: 4153 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKIPMKIE-SLAGLGVVKVECGSQF 4209

Query: 363  TAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            +  +T +G ++T+G G +  LGHG  DH+    PR+V  L+G +   ++ G  H  A   
Sbjct: 4210 SVALTRSGAIYTWGKGDYHRLGHGTDDHVRR--PRKVAALQGKKIISIATGSLHCVAC-- 4265

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                        T  G++FTWGD D+G+LG G       P  V  L  + I +VACG   
Sbjct: 4266 ------------TDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4313

Query: 481  SVALTT 486
            ++A +T
Sbjct: 4314 TLAWST 4319



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 144/259 (55%), Gaps = 20/259 (7%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H + +T+   ++SWG   GGRLGHG  A    P+LIE L   N+  +ACG  ++ A++ +
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW--HTAVVTSAGHL 372
           G+LYTWG G Y  G LGHG+  +  IP  V+  L+G  + Y++CG     T  VT++G +
Sbjct: 576 GELYTWGRGNY--GRLGHGNSDNVMIPTLVTA-LNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           F++GDG++G LG G    +  P+ V+ L  +   +V CG   +AA+              
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAAL-------------- 678

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T+ G+++TWG G+  RLGHG+++   +P+ +  L  + + ++  G+   +ALT    +Y 
Sbjct: 679 TAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYG 738

Query: 493 MGSAAYGQLGVPVADGLVP 511
            G   YGQ+  P    +VP
Sbjct: 739 WGRNDYGQID-PALGTVVP 756



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 27/361 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G ++         + +G E    +PQ +   S
Sbjct: 452 PFYYDTIAELGIKQLCCTERALMILSVNGNVY--------MMYYGSET--QYPQRVYGFS 501

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              + ++A      H  A+T+   +Y+WG+G  + G LGHG +     P+ +   ++  +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNG--DGGRLGHGDRAWYDEPKLIEALVEK-N 558

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++I+CG  ++A ++S G L+T+G G++G LGHG+  +  IP  V  L G     V+CG 
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACG- 617

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                      S  S     T+ G +F+WGDG+ G+LG G  +    P+ V  L+D N+ 
Sbjct: 618 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    D +   ++   +    V+E+  G  H
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLH 726

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V ALT    +Y WG+   GQ+          PTL   L  K V  + CG   +   C   
Sbjct: 727 VLALTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTSA 786

Query: 593 W 593
           W
Sbjct: 787 W 787



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 165/322 (51%), Gaps = 39/322 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG     +LG+G     S P   + ++ + ++ + C E     ++ +G++Y     
Sbjct: 437 EVIAWGSV---KLGNG-----SSPFYYDTIAELGIKQLCCTERALMILSVNGNVY----- 483

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDG--IHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                ++ +GS+     P++V G  +   I ++  S G  H   +T    ++++G+G  G
Sbjct: 484 -----MMYYGSETQ--YPQRVYGFSEKPIIMIASHSDGT-HYLALTQDNSVYSWGNGDGG 535

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD      P+ +E L     T ++CG  ++AA+              +S G+L+TW
Sbjct: 536 RLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAAL--------------SSNGELYTW 581

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYG 499
           G G+ GRLGHG+ +  + P  V  L    +  VACG     ++ +T SG V++ G   YG
Sbjct: 582 GRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYG 641

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           +LG    DG    ++  ++ +  V +V CG    AALT+  +VYTWGKG   +LGHG++D
Sbjct: 642 KLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNED 701

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +   P ++D LK K+VK +  G
Sbjct: 702 HVRYPKIIDILKTKKVKELCVG 723



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 123/251 (49%), Gaps = 15/251 (5%)

Query: 182  SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            + +V  +  G       S G ++ WG+G   G LG G+           D L PK +E+ 
Sbjct: 4092 TEIVDIACGGHHSAAITSAGWLYTWGKG-RYGRLGHGDSE---------DQLTPKLIEAL 4141

Query: 242  MALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                V ++ACG+  A  + VT    ++SWG+   G+LG G       P  IE L+G+ V 
Sbjct: 4142 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVV 4201

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKV+  L G  +  I+ G
Sbjct: 4202 KVECGSQFSVALTRSGAIYTWGKGDYHR--LGHGTDDHVRRPRKVAA-LQGKKIISIATG 4258

Query: 360  LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              H    T  G +FT+GD   G LG G   +   PR V  L+G + TRV+CG  HT A  
Sbjct: 4259 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4318

Query: 420  VATDSSSSSPS 430
                + S  P+
Sbjct: 4319 TMKATQSKMPA 4329



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 149/311 (47%), Gaps = 37/311 (11%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           +++S S G+ +        V+ WG G   G LG G+ R  Y          PK +E+ + 
Sbjct: 507 MIASHSDGTHYLALTQDNSVYSWGNG-DGGRLGHGD-RAWYDE--------PKLIEALVE 556

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
            ++  IACG+ ++  ++  GE+++WG  + GRLGHG   +V  P L+  L+G  V  VAC
Sbjct: 557 KNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVAC 616

Query: 304 --GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
             G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I+++ + CG  
Sbjct: 617 GSGDSQTLCVTASGIVFSWGDGNY--GKLGRGGCDGSKTPKIVDKLLD-INVAKVYCGGQ 673

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +A +T+ G ++T+G G    LGHG+      P+ ++ L+  +   +  G  H  A+   
Sbjct: 674 FSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLAL--- 730

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVACG 477
                      T    ++ WG  D G+    LG    EP L P     L  +N+  +ACG
Sbjct: 731 -----------TEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPT----LSGKNVIGLACG 775

Query: 478 HDLSVALTTSG 488
              S A  TS 
Sbjct: 776 PTQSFAWCTSA 786



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +   +  +L  +    ++ G      VT+ G 
Sbjct: 3952 SGAIYGWGHN--HRGQLGGLEGAKVKLPV---LCESLSALRPVQLTGGEQTLFAVTADGK 4006

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 4007 VYATGYGAVGRLGIGGTDSVMVPTLLESIQ------------HVFVKKVAVNSGGKHCLA 4054

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  +ACG   S A+T++G +Y
Sbjct: 4055 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4114

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKG 548
            T G   YG+LG     D L P  ++  + +  V +VACG+     L  T    V++WG G
Sbjct: 4115 TWGKGRYGRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4173

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4174 DYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL 4213



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAV---------- 4001

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    + +VA   G    +AL++
Sbjct: 4002 ----TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4057

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  E+  + + ++ACG +H AA+TS   +YTWG
Sbjct: 4058 EGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4117

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++ +P L++ L+D +V  V CG      +C+
Sbjct: 4118 KGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 4161



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+  G     A+T  G VY  G 
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG+   D  +VPT ++  I   FV++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 4013 GAVGRLGIGGTDSVMVPTLLES-IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4071

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++ + + P L++ L   ++  + CG + +A I    W+
Sbjct: 4072 LGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4113


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 193/386 (50%), Gaps = 27/386 (6%)

Query: 198  DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
            DS   V++WG     G LGG     G    R      P   E+  AL    I  G++   
Sbjct: 2590 DSEYAVYVWGLN-DKGQLGGLN---GSKVKR------PTFNEALTALKPIEIVGGSKSLF 2639

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSG 315
            +V+ +G++F  G+ SGGRLG      VS P+ I  LS   ++ VA   G  H  A++  G
Sbjct: 2640 IVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDG 2699

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
             + +WGDG    G LGHG  ++   P K+  +L    + YI+CG  H+A +TS G L+T+
Sbjct: 2700 KVLSWGDG--EDGKLGHGDILTLDTP-KLIDSLLAKRVFYIACGSAHSAAITSDGELYTW 2756

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G G +G LGH D +S   P+ V+   G   T+V+CG     A  +A DS           
Sbjct: 2757 GQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACG--SRDAQTLALDSE---------- 2804

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G +++WGDGD G+LG G  +    P+ V  L+   + Q+ CG   SVALT +G V+T G 
Sbjct: 2805 GNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGK 2864

Query: 496  AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              Y +LG+   + +    +  ++    ++ +A G  H  A+++   VY WG   +GQ G+
Sbjct: 2865 GEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGN 2924

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  +    P LV    + ++ RV CG
Sbjct: 2925 GTTNANQEPRLVTNFNNIKINRVGCG 2950



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 187/381 (49%), Gaps = 21/381 (5%)

Query: 206  WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEI 265
            WG      ++ G  HR   +    +    P A +S   L    +  G +    VT  G++
Sbjct: 3539 WGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKV 3598

Query: 266  FSWGEESGGRLGHG----READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            ++ G    GRLG G    +   V  PQL++ L+ +    V  G  H  A++ +G++Y WG
Sbjct: 3599 YASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWG 3658

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            DG  + G LG G++V+   P+ V    D   +  I+CG +H+A ++  GHL+T+G G +G
Sbjct: 3659 DG--DDGKLGLGNRVTHSKPQLVQSLSDKCIID-IACGGFHSAAISRYGHLYTWGKGRYG 3715

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHGD+     P+ V+ L      +V+CG      + V +D +            +++W
Sbjct: 3716 RLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDN------------VWSW 3763

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            GDGD G+LGH   E    P  +  L  + I Q+ CG   SVAL+ +G +YT G   Y +L
Sbjct: 3764 GDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRL 3823

Query: 502  GVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            G   ++ +  P  V G   +  V+  + G+ HV ALT   +VY WG    GQLG G    
Sbjct: 3824 GHGSSEHVRKPKPVSGLQGKKIVQ-FSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHP 3882

Query: 561  RNSPTLVDFLKDKQVKRVVCG 581
               P  +  LK K++++V CG
Sbjct: 3883 IARPRPIAALKGKRIQQVSCG 3903



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 169/341 (49%), Gaps = 19/341 (5%)

Query: 206  WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEI 265
            +G+  A+G+   G   +G    +    + P+ V+    +    +  G RH + ++  GE+
Sbjct: 3595 YGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEV 3654

Query: 266  FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
            ++WG+   G+LG G     S PQL++ LS   +  +ACG +H+ A++R G LYTWG G Y
Sbjct: 3655 YAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRY 3714

Query: 326  NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGAL 383
              G LGHG       P+ V G L   H+  ++CG     T  VTS  +++++GDG +G L
Sbjct: 3715 --GRLGHGDYEDYLYPKLVQG-LINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKL 3771

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            GH    S  +P ++E+L G    ++ CG   + A+              ++ G L+TWG 
Sbjct: 3772 GHNISESCKLPCKIESLSGKGIIQIDCGSQFSVAL--------------SANGTLYTWGK 3817

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
            GD  RLGHG  E    P+ V+ L  + I Q + G    +ALT  G VY  G    GQLG 
Sbjct: 3818 GDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGD 3877

Query: 504  PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              A  +   R    +    +++V+CG+ H  A  S    +T
Sbjct: 3878 GTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWASEEACHT 3918



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 148/285 (51%), Gaps = 29/285 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WG+G  +G LG G +RV +S         P+ V+S     + +IACG  H+  ++
Sbjct: 3652 GEVYAWGDG-DDGKLGLG-NRVTHS--------KPQLVQSLSDKCIIDIACGGFHSAAIS 3701

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
            + G +++WG+   GRLGHG   D  +P+L++ L   +V  VACG  +  T  VT   +++
Sbjct: 3702 RYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVW 3761

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGH    SC +P K+   L G  +  I CG   +  +++ G L+T+G G
Sbjct: 3762 SWGDGDY--GKLGHNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG       P+ V  L+G +  + S G  H  A+              T  G++
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLAL--------------TDDGEV 3864

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
            + WGD D+G+LG G   P   P  +A L  + I QV+CG   S A
Sbjct: 3865 YAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 140/287 (48%), Gaps = 33/287 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V  WG+G  +G LG G+       +  T    PK ++S +A  V  IACG+ H+  +T
Sbjct: 2699 GKVLSWGDG-EDGKLGHGD-----ILTLDT----PKLIDSLLAKRVFYIACGSAHSAAIT 2748

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG+   GRLGH  E     P+L++   G N+  VACG  +  T A+   G++Y
Sbjct: 2749 SDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVY 2808

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG +  G LG G    C  P+KV   L G  +  I CG   +  +T+ G ++T+G G
Sbjct: 2809 SWGDGDF--GKLGRGGSDGCCTPQKVE-RLVGHRVVQIECGAQFSVALTATGQVWTWGKG 2865

Query: 379  SFG--ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             +    LG G+H+    P  V  L+ +    ++ G  H  AV              ++ G
Sbjct: 2866 EYYRLGLGRGEHVRR--PTLVNQLKLVTIDHIAVGTLHCIAV--------------STQG 2909

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
             ++ WGD D G+ G+G       P  V    +  I +V CG   S+A
Sbjct: 2910 DVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 25/276 (9%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG  +GSKV      +    L  I +   S  L+   +V++ G +F 
Sbjct: 2595 VYVWGLN--DKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLF---IVSNEGKVFV 2649

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRG--LRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
             GD S G LG       S PR++  L    ++T  V  G  H  A+ +            
Sbjct: 2650 CGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLD----------- 2698

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
               GK+ +WGDG+ G+LGHGD      P+ +  L+ + +  +ACG   S A+T+ G +YT
Sbjct: 2699 ---GKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYT 2755

Query: 493  MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGAN 550
             G   YG+LG          ++  E     + +VACG+      AL S   VY+WG G  
Sbjct: 2756 WGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDF 2815

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            G+LG G  D   +P  V+ L   +V ++ CG  F+ 
Sbjct: 2816 GKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSV 2851



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 26/239 (10%)

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTS----IPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            VTS G ++  G    G LG G +   +     P+ V+ L  +    V+ G  H  A+   
Sbjct: 3592 VTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLAL--- 3648

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                       ++ G+++ WGDGD G+LG G++     P+ V  L D+ I  +ACG   S
Sbjct: 3649 -----------STTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHS 3697

Query: 482  VALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTS 538
             A++  GH+YT G   YG+LG     D L P  V G I    V+ VACG+       +TS
Sbjct: 3698 AAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVK-VACGSGDAQTMCVTS 3756

Query: 539  TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
               V++WG G  G+LGH   ++   P  ++ L  K + ++ CG  F+  +     L+ W
Sbjct: 3757 DDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTW 3815



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 30/252 (11%)

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++ +G    G L   D      P   ++L  L+ T+V  G     AV             
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAV------------- 3592

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE---NICQVAC--GHDLSVALTT 486
             TS GK++  G  + GRLG G   P+  P  V P + +   NI +VA   G    +AL+T
Sbjct: 3593 -TSYGKVYASGYTESGRLGIGPYNPK-NPYVVTPQLVQGLNNIIKVAVNSGGRHCLALST 3650

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            +G VY  G    G+LG+         ++   +++  + ++ACG +H AA++    +YTWG
Sbjct: 3651 TGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWG 3710

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL----HKW------VSS 596
            KG  G+LGHGD ++   P LV  L +  V +V CG      +C+    + W         
Sbjct: 3711 KGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGK 3770

Query: 597  VDHSVCSSCHNP 608
            + H++  SC  P
Sbjct: 3771 LGHNISESCKLP 3782



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 44/293 (15%)

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           ++I  L  ++VE V C       VT SG L+     +Y+   L    K    +P K    
Sbjct: 443 KVILTLERLHVESVVCSRNEILVVTTSGTLHFI---SYSIDSLNFEEKQMMNVPMKSVDV 499

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTT 406
            D  +L+           VT  G ++++G   FGALGHG   S+   P  +     L   
Sbjct: 500 YDETYLA-----------VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVV 548

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            VSCG    AAV              T  GKL+ WG     ++ H        PE V  +
Sbjct: 549 MVSCGKDFCAAV--------------TEDGKLYMWG-----KILHSSNCCYT-PELVKSI 588

Query: 467 IDENICQVACGHDL--SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRV--DGEIAESF 522
            + ++ +V+CG  +  ++AL+  G+V++       +     +  ++P+ +  D EI    
Sbjct: 589 SEWHVSKVSCGSSINNTLALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVS-- 646

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
              + C     A +   + V+TWG+G N  LGH +    N P  V FL  KQV
Sbjct: 647 ---IYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQV 696



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 29/239 (12%)

Query: 259 VTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           VT++GE++SWG    G LGHG++ +    P+ I   S + V +V+CG+    AVT  G L
Sbjct: 507 VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKL 566

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG--LWHTAVVTSAGHLFTF 375
           Y WG   ++S          C+ P  V  ++   H+S +SCG  + +T  ++  G++F+F
Sbjct: 567 YMWGKILHSSN--------CCYTPELVK-SISEWHVSKVSCGSSINNTLALSREGYVFSF 617

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            +      G  D     IP  +  +       + C     A +  A +            
Sbjct: 618 -EYRNSDRGCDDKSLNVIPSMI--VFDYEIVSIYCHNDVNAVIDCANN------------ 662

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             +FTWG G+   LGH +      P+ V  L  + +  ++   D  +ALT +G VY  G
Sbjct: 663 --VFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 31/274 (11%)

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AVT+ G++Y+WG   +  G LGHG K S +   +       + +  +SCG    A VT  
Sbjct: 506 AVTQKGEVYSWGVNEF--GALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTED 563

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G L+ +G      + H  +   + P  V+++     ++VSCG            SS ++ 
Sbjct: 564 GKLYMWG-----KILHSSNCCYT-PELVKSISEWHVSKVSCG------------SSINNT 605

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
              +  G +F++   +  R G  DK   + P  +  + D  I  + C +D++  +  + +
Sbjct: 606 LALSREGYVFSFEYRNSDR-GCDDKSLNVIPSMI--VFDYEIVSIYCHNDVNAVIDCANN 662

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V+T G      LG   +  +   +    ++   V  ++    ++ ALT T +VY W    
Sbjct: 663 VFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCW---- 718

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            GQL   D +N      V  L ++QVK++ C  N
Sbjct: 719 -GQL---DNENTTQCRPVKCLMNRQVKKIACSPN 748



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 221 RVGYSFS-------RQTDALLPKAVESTMALD--VHNIACGARHAVLVTKQGEIFSWGEE 271
           R GY FS       R  D      + S +  D  + +I C      ++     +F+WG  
Sbjct: 610 REGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRG 669

Query: 272 SGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +   LGH     V+ P+ ++ LSG  V  ++  + +  A+T +G +Y WG
Sbjct: 670 NNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 196/367 (53%), Gaps = 30/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D  LP  + +  A  + +IACGA H +  ++ + E
Sbjct: 38  WGRG-EDGQLGHGD---------TDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNE 87

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I  L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 88  LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWG--R 145

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 146 NQNGQLGLGNTEDSLVPQKIQA-FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 204

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD      P +V ++   +   V+CG  HT +V              +S G ++T+G  
Sbjct: 205 LGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISV--------------SSSGGIYTYGWS 250

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHG+ E  L P+ +  L D+ I QV+ G   S+ALT++G ++  G   +GQ+GV 
Sbjct: 251 KYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVG 310

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     +  V+ ++CG  H  A+T    V++WG+G NGQLGHGD  +RNS
Sbjct: 311 DNLDHCSPVQVKFPQDQRVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNS 369

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 370 PKIIEAL 376



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 179/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H V +     + SWG    G+LGHG   D   P  +  L   +++ +ACG  HT
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  +LY+WG G +  G LGHG+     IP+ +   L G+ +  I+CG  H   VT
Sbjct: 79  LAYSESRNELYSWGWGDF--GRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G+   + +P++++  +G+    V+ G  H+ A+         
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAI--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  R  PE V+ +  + +  VACG   ++++++S
Sbjct: 187 -----TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSS 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP ++   +++  + +V+ G  H  ALTST  ++ WG
Sbjct: 242 GGIYTYGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLFGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +  SP  V F +D++V ++ CG   T  +
Sbjct: 301 WNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAV 342



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 168/322 (52%), Gaps = 29/322 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + S+   + H  A+ +  S  +++ WG G           R+G+  S  +D L+P+ + +
Sbjct: 68  IDSIACGADHTLAYSE--SRNELYSWGWGDFG--------RLGHGNS--SDLLIPQPIIA 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT +GE+ SWG    G+LG G   D   PQ I+   GV +++
Sbjct: 116 LQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKM 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+ A+T +G+LY WG G Y  G LG G +   W P KVS ++D   +  ++CG 
Sbjct: 176 VAAGAEHSVAITENGELYGWGWGRY--GNLGLGDRNDRWNPEKVS-SVDCDKMVMVACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G ++T+G   +G LGHG+   + +P++++ L     ++VS G  H+ A+  
Sbjct: 233 RHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS G LF WG    G++G GD      P  V    D+ + Q++CG   
Sbjct: 291 ------------TSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLG 502
           ++A+T   +V++ G    GQLG
Sbjct: 339 TIAVTEKENVFSWGRGTNGQLG 360



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++S  S G  H     S G +F WG    N F   G+  VG +     D   P  V+   
Sbjct: 276 LISQVSGGWRHSMALTSTGLLFGWG---WNKF---GQVGVGDNL----DHCSPVQVKFPQ 325

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
              V  I+CG RH + VT++  +FSWG  + G+LGHG   D + P++IE LS
Sbjct: 326 DQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 179/342 (52%), Gaps = 19/342 (5%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQL 289
           D  LP+ + +    ++  +ACGA H    +  +  I+SWG    GRLGHG  +D+  P  
Sbjct: 44  DRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I+ L G+ +  +ACG+ H  AVT  G++Y+WG     +G LG G      +P K+    +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLLA-FE 160

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ +  ++ G  HTA VT  G L+ +G G +G LG GD     +P EV  +   +   V+
Sbjct: 161 GVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HT AV              +  GKL+T+G    G+LGHGD    L P  VA L + 
Sbjct: 221 CGWRHTIAV--------------SQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF 266

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVAC 528
           NI QV+ G   +VALT +G +Y  G   +GQ+G   V D   P  +        V +V+C
Sbjct: 267 NITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSC 326

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           G  H  A+T  + VY+WG+G +GQLGHGD  +R++P  +  L
Sbjct: 327 GWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 178/343 (51%), Gaps = 21/343 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H V +     + S+G    G+LGHG   D   P++I  L+   + LVACG  HT
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHT 69

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + +   +Y+WG G +  G LGHG+    ++P  +   L G+ +  I+CG  H   VT
Sbjct: 70  TAYSATRLTIYSWGWGDF--GRLGHGNSSDLFVPHPIKA-LQGLEIRQIACGDSHCLAVT 126

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G ++++G    G LG GD   + +P ++    G+    ++ G  HTAAV         
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAV--------- 177

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  GKL+ WG G  G LG GD+  R+ P  V  + DE +C VACG   ++A++ S
Sbjct: 178 -----TDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQS 232

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG    AD L+P +V   +AE  + +V+ G  H  ALT   K+Y WG
Sbjct: 233 GKLYTYGWSKYGQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLYGWG 291

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQ-VKRVVCGLNFTAII 588
               GQ+G GD D+  SP L+      Q V +V CG   T  +
Sbjct: 292 WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 147/283 (51%), Gaps = 20/283 (7%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           R+G+  S  +D  +P  +++   L++  IACG  H + VT  GE++SWG    G+LG G 
Sbjct: 89  RLGHGNS--SDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD 146

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
             D   P  +    GV+V+++A G  HT AVT  G LY WG G Y  G LG G +    +
Sbjct: 147 TDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRY--GNLGLGDRGDRML 204

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           P +V    D   +  ++CG  HT  V+ +G L+T+G   +G LGHGD+    +P +V  L
Sbjct: 205 PAEVPAVGD-EKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAAL 263

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                T+VS G  HT A+              T  GKL+ WG    G++G GD +    P
Sbjct: 264 AEFNITQVSGGWRHTVAL--------------TEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 461 ECVA-PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           + ++ P   + + QV+CG   +VA+T   +VY+ G    GQLG
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 19/224 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+  + + + H +A  D    G ++ WG G   G LG G+         + D +LP  V
Sbjct: 162 VSVKMLAAGAEHTAAVTDG---GKLYGWGWG-RYGNLGLGD---------RGDRMLPAEV 208

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +     +  +ACG RH + V++ G+++++G    G+LGHG  AD   P  +  L+  N+
Sbjct: 209 PAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH--LSYI 356
             V+ G  HT A+T +G LY WG   +  G +G G       P+ +S  + G H  +  +
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKF--GQVGSGDVDDHTSPQLIS--IPGQHQRVVQV 324

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           SCG  HT  VT   +++++G G+ G LGHGD +  S P+ ++ L
Sbjct: 325 SCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           +  +  V+ G   +VAL +   V + G    GQLG   A+     R+ G + +  +  VA
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVA 63

Query: 528 CGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           CGA H  A ++T   +Y+WG G  G+LGHG+  +   P  +  L+  +++++ CG
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACG 118



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH V VT +  ++SWG  + G+LGHG   D S P+ I+ LS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 148/442 (33%), Positives = 221/442 (50%), Gaps = 29/442 (6%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEI 292
            LP   ++  AL    I  G++    VT++G++++ GE + GRLG G     VS P+ I  
Sbjct: 3487 LPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITS 3546

Query: 293  LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            LS   ++ VA   G  H+ A+T  G +++WG+G  + G LGH S+ +C  PR +   L  
Sbjct: 3547 LSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEG--DDGKLGHFSRWNCDKPRLIEA-LKS 3603

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
              +  I+CG  H+A +TS G L+T+G G +G LGHGD+ +   P++V+ L   R  +V+C
Sbjct: 3604 KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVAC 3663

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G    A  +  TD            GK+++WGDGD G+LG G  E    P  V  L D+ 
Sbjct: 3664 GS-RDAQTLALTDE-----------GKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQK 3711

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACG 529
            +CQ+ CG   S+ALT SG V+T G   Y +LG    A    P  V+G   +  V  VA G
Sbjct: 3712 VCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVH-VAVG 3770

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            A H  A+T + +V+ WG   +GQ G+G       P LV  L+  ++ +V CG + +    
Sbjct: 3771 ALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALV-VLEGYKISKVACGSSHSI--- 3826

Query: 590  LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI-NKPYR 648
               W ++ D SV ++ H P  F   R       L      S   S+ AA A S+ +K  R
Sbjct: 3827 --AWATT-DMSVPTT-HEPVLFSTSRDALGATLLGVNDNNSEENSVSAASAQSVTSKALR 3882

Query: 649  VCDDCFTKLKKTDTKLKRTSGY 670
                     + TD   ++  GY
Sbjct: 3883 PSLAKIILSQDTDISKQQALGY 3904



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 178/349 (51%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P + E+        +  G +    VT +G++F+ G  +GGRLG G    VSHP  +E + 
Sbjct: 4485 PVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQ 4544

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V ++ +A   G  H  A++  G++Y+WG+G    G LGHG++  C  PR V  +L G  
Sbjct: 4545 HVFIKKLAVNSGGKHCLALSAEGEVYSWGEG--EDGKLGHGNRSPCDRPR-VIDSLRGKE 4601

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            +  I+ G  H+A +T+ G L+T+G G +G LGHGD      P+ VE L+  R   ++CG 
Sbjct: 4602 VVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGS 4661

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L  + + 
Sbjct: 4662 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVM 4709

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   Y +LG    D +   R    +    V +VACG+ H
Sbjct: 4710 KVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLH 4769

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A T T +V++WG    GQLG G  +    P LV  L  K++ RV CG
Sbjct: 4770 CVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACG 4818



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 169/347 (48%), Gaps = 39/347 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G      S  RQ  +L    ++      VH+   G RH++ +T
Sbjct: 3516 GKVYACGEA-TNGRLGLGITTGTVSVPRQITSLSQYVIKKVA---VHS---GGRHSLALT 3568

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    V  +ACG  H+ A+T +GDLYTW
Sbjct: 3569 TDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTW 3628

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P++V   L    +  ++CG     T  +T  G ++++GDG
Sbjct: 3629 GLGEY--GRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWGDG 3685

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P EV+ LR  +  ++ CG   + A+              T  G++
Sbjct: 3686 DFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLAL--------------TKSGQV 3731

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG V+  G   +
Sbjct: 3732 WTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDH 3791

Query: 499  GQLG-----VPVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTST 539
            GQ G     V     LV       + E + + +VACG+ H  A  +T
Sbjct: 3792 GQQGNGTTTVNRKPALV-------VLEGYKISKVACGSSHSIAWATT 3831



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 172/334 (51%), Gaps = 26/334 (7%)

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            Q  +F WG     +LG  + + +  P L + LS +    +  G      VT+ G +Y  G
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522

Query: 322  DGTYNSGLLGHG-SKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            + T  +G LG G +  +  +PR+++  +   I    +  G  H+  +T+ G +F++G+G 
Sbjct: 3523 EAT--NGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGD 3580

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGH    +   PR +E L+  R   ++CG  H+AA+              TS G L+
Sbjct: 3581 DGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAI--------------TSNGDLY 3626

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +L P+ V  L  E + QVACG     ++ALT  G VY+ G   
Sbjct: 3627 TWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGD 3686

Query: 498  YGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +G+LG   ++G  VP  VD  + +  V ++ CGA    ALT + +V+TWGKG   +LGHG
Sbjct: 3687 FGKLGRGGSEGCNVPHEVD-RLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHG 3745

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               +   P +V+ LK K++  V  G    A+ CL
Sbjct: 3746 TDAHVRKPQIVEGLKGKKIVHVAVG----ALHCL 3775



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 29/292 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G          ++    P+ ++S    +V +IA G  H+  +T
Sbjct: 4567 GEVYSWGEG-EDGKLGHG---------NRSPCDRPRVIDSLRGKEVVDIAAGGAHSACIT 4616

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              GE+++WG+   GRLGHG   D   P+L+E L    V  +AC  G+  T  +T   +++
Sbjct: 4617 ANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVW 4676

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+   L G  +  + CG   +  +T +G ++T+G G
Sbjct: 4677 SWGDGDY--GKLGRGGSDGCKVPMKIE-TLQGQGVMKVECGSQFSVALTKSGSVYTWGKG 4733

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG       PR+V  L+  +   V+CG  H  A               T  G++
Sbjct: 4734 DYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVAC--------------TDTGEV 4779

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
            F+WGD D+G+LG G       P  VA L+ + I +VACG   S+A +T+  V
Sbjct: 4780 FSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 172/341 (50%), Gaps = 33/341 (9%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  IAC  R  ++++K G+++     S              P L ++    + E++    
Sbjct: 577 VQQIACSERCCLILSKAGKVYMLYYTS------------LSPTLQQLNGFGDREVIRIAS 624

Query: 306 Y----HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           +    H   +T  G++++WG+G  + G LGHG   +   P  ++G L G  ++ I CG  
Sbjct: 625 HPDGKHYMGLTSDGEVFSWGNG--DGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSS 681

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++  +TS G ++++G G+FG LGHG     + P  ++  +G R   V+CG    A  +  
Sbjct: 682 YSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGS-GDAQTLAV 740

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
           TDS           G +++WGDGD G+LG G  +    P+ +  L+ +++ +V CG+  S
Sbjct: 741 TDS-----------GAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFS 789

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           +ALT SG VYT G     +LG    D    P +++  ++   V+++A G+ H  A+T   
Sbjct: 790 MALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDG 848

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           ++Y WG+   GQLG+    N   PTL+  ++ K +  V CG
Sbjct: 849 ELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACG 889



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 145/288 (50%), Gaps = 21/288 (7%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           +H + +T  GE+FSWG   GG+LGHG   +   P LI  LSG  V  + CG  ++ A+T 
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS 688

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGH 371
           +G++Y+WG G  N G LGHGS      P  +     G  +  ++CG     T  VT +G 
Sbjct: 689 NGEVYSWGKG--NFGRLGHGSSEDQTTPMLLK-FFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++++GDG +G LG G +     P+ +E L G    RV CG   + A+             
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMAL------------- 792

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G ++TWG GD  RLGHG ++    P+ +  L  + +  +A G    +A+T  G +Y
Sbjct: 793 -TKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELY 851

Query: 492 TMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             G    GQLG P +++   PT + G   ++ +  VACG     A TS
Sbjct: 852 GWGRNEQGQLGNPSISNFTEPTLIGGMEGKNII-GVACGPTQTFAWTS 898



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 146/307 (47%), Gaps = 29/307 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           ++S   G  +    S G+VF WG G   G LG G+++         +   P  +      
Sbjct: 622 IASHPDGKHYMGLTSDGEVFSWGNG-DGGKLGHGDYQ---------NHEEPALITGLSGK 671

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V  I CG+ ++V +T  GE++SWG+ + GRLGHG   D + P L++   G  +  VAC 
Sbjct: 672 QVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACG 731

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT SG +Y+WGDG Y  G LG G    C  P KV   L G  +  + CG   
Sbjct: 732 SGDAQTLAVTDSGAVYSWGDGDY--GKLGRGGNDGCKTP-KVIEKLMGQDVVRVYCGNQF 788

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T +G ++T+G G    LGHG       P+++E L   +   ++ G  H  A+    
Sbjct: 789 SMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAI---- 844

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G+L+ WG  ++G+LG+        P  +  +  +NI  VACG   + 
Sbjct: 845 ----------TEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTF 894

Query: 483 ALTTSGH 489
           A T+ G 
Sbjct: 895 AWTSGGQ 901



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 181/400 (45%), Gaps = 42/400 (10%)

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            G+I+ WG    G+LG    A V  P   E L+      +  GE    AVT  G ++  G 
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI-----SCGLWHTAVVTSAGHLFTFGD 377
            G      +G    VS          L+ I   +I     + G  H   +++ G ++++G+
Sbjct: 4521 GAGGRLGVGGTESVSH------PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGE 4574

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G  G LGHG+      PR +++LRG     ++ G  H+A +              T+ G+
Sbjct: 4575 GEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACI--------------TANGE 4620

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
            L+TWG G  GRLGHGD E +  P+ V  L    +  +ACG     ++ +T   +V++ G 
Sbjct: 4621 LYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGD 4680

Query: 496  AAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG  VP +++  +    V +V CG+    ALT +  VYTWGKG   +LG
Sbjct: 4681 GDYGKLGRGGSDGCKVPMKIE-TLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLG 4739

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC-----LHKWVSSVDHSVCSSCHNPF 609
            HG  D+   P  V  L++K+V  V CG +   + C     +  W  + +  +     N  
Sbjct: 4740 HGSDDHVRRPRKVSALQNKKVIDVACG-SLHCVACTDTGEVFSWGDNDEGQLGDGTTNAI 4798

Query: 610  GFRR-------KRHNCYNCGLVFCKACSSRKSLKAALAPS 642
               R       K+ N   CG     A S+ K++ A   PS
Sbjct: 4799 QRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSAGKLPS 4838



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 2/160 (1%)

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
           G TS G++F+WG+GD G+LGHGD +    P  +  L  + + ++ CG   SVALT++G V
Sbjct: 633 GLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEV 692

Query: 491 YTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
           Y+ G   +G+LG   ++      +        + +VACG+      A+T +  VY+WG G
Sbjct: 693 YSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDG 752

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D   +P +++ L  + V RV CG  F+  +
Sbjct: 753 DYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMAL 792



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT--RVDGEIAESFVEEVAC 528
           + Q+AC     + L+ +G VY +   +           L PT  +++G   +  V  +A 
Sbjct: 577 VQQIACSERCCLILSKAGKVYMLYYTS-----------LSPTLQQLNG-FGDREVIRIAS 624

Query: 529 --GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
                H   LTS  +V++WG G  G+LGHGD  N   P L+  L  KQV ++ CG +++ 
Sbjct: 625 HPDGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSV 684

Query: 587 II 588
            +
Sbjct: 685 AL 686


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 176/320 (55%), Gaps = 24/320 (7%)

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T  G +++WG    GRLGHG       P+L   L+G  +  V CG YHT AV+  G+L+T
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG G Y  G LGHG++     P++V  +L G+ +  I+CG  HTA+VTS G L+T+GD  
Sbjct: 83  WGGGMY--GKLGHGNESGHSTPKRVD-SLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 380 FGALGHGD---HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            G  GHGD   H  T  P+ +E L G R  ++S   +HT  +              T  G
Sbjct: 140 NGVAGHGDTEGHQYT--PKLLERLSGKRVVQLSACGFHTGCL--------------TDAG 183

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           +++TWG+G  GRLGHG +     P  V  L+ +   Q++CG   S  +T  G +YT G  
Sbjct: 184 EVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGG 243

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            +GQLG     + + PT V  ++   F+ ++ CG  H  ALTS+ +VYTWG G +G+LGH
Sbjct: 244 EHGQLGHGDKVNKVKPTLVK-DLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH 302

Query: 556 GDKDNRNSPTLVDFLKDKQV 575
           G     ++P LV+ L  ++V
Sbjct: 303 GCGKKVSTPQLVEKLVGQKV 322



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/302 (37%), Positives = 166/302 (54%), Gaps = 26/302 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG G  +G LG G++  G+ +       +P+   S     + ++ CG+ H   V+
Sbjct: 26  GGVYTWGRG-DDGRLGHGDN--GWKY-------VPRLTHSLAGQVITHVTCGSYHTAAVS 75

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +G +F+WG    G+LGHG E+  S P+ ++ L G+ V  +ACG  HT  VT  G LYTW
Sbjct: 76  SKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTW 135

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           GD    +G+ GHG         K+   L G  +  +S   +HT  +T AG ++T+G+G F
Sbjct: 136 GDK--ENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHG   +   PR VETL G R  ++SCG +H+A V              T+ GK++T
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVV--------------TADGKMYT 239

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           +G G+ G+LGHGDK  ++ P  V  L    + Q+ CG   SVALT+S  VYT G+  +G+
Sbjct: 240 FGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGK 299

Query: 501 LG 502
           LG
Sbjct: 300 LG 301



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 11/196 (5%)

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
           D     P   T  G ++TWG GD GRLGHGD   +  P     L  + I  V CG   + 
Sbjct: 13  DRVRERPHRRTHGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTA 72

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           A+++ G+++T G   YG+LG     G   P RVD  +  + V ++ACG+ H A +TS   
Sbjct: 73  AVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVV-DIACGSRHTAIVTSRGC 131

Query: 542 VYTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRV-VCGLN---FTAIICLHKW--- 593
           +YTWG   NG  GHGD + ++ +P L++ L  K+V ++  CG +    T    ++ W   
Sbjct: 132 LYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEG 191

Query: 594 -VSSVDHSVCSSCHNP 608
               + H    +CH+P
Sbjct: 192 KFGRLGHGAERNCHSP 207



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 12/167 (7%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           R+S   VV  S+ G         G+V+ WGEG   G LG G  R  +S         P+ 
Sbjct: 160 RLSGKRVVQLSACGFHTGCLTDAGEVYTWGEG-KFGRLGHGAERNCHS---------PRL 209

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           VE+ +      I+CG  H+ +VT  G+++++G    G+LGHG + +   P L++ L GV 
Sbjct: 210 VETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVF 269

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           +  + CG  H+ A+T S ++YTWG+G  + G LGHG       P+ V
Sbjct: 270 LTQITCGWSHSVALTSSHEVYTWGNG--DHGKLGHGCGKKVSTPQLV 314


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 213/436 (48%), Gaps = 48/436 (11%)

Query: 151  SVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGI 210
            + +FS   + +A  D++N+  S     R+ L   +S+ +HG+          VF+WG   
Sbjct: 2889 AANFSFLTVDDALDDDTNNMYSRR---RLDL---LSTDTHGNK---------VFVWGLN- 2932

Query: 211  ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI--ACGARHAVLVTKQGEIFSW 268
                      ++G   S   +A +   +ES     +H I  A G++ + +V+  G++F+ 
Sbjct: 2933 -------DMRQLGTDLS---EAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982

Query: 269  GEESGGRLGHGREADVSHPQLIEILSGVNVELVA--CGEYHTCAVTRSGDLYTWGDGTYN 326
            GE S GRLG G  A++  P  I  LS   V  VA  C   H  AVT  G +++WGDG Y 
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY- 3041

Query: 327  SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
             G LGHGS  S   P+ +       H+  +SCG  H+A V+  G LFT+G G+ G LGHG
Sbjct: 3042 -GQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHG 3099

Query: 387  DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
            D  + + P+ V  L  +R + V+CG    A  + A D+S            L+ WGDG  
Sbjct: 3100 DSNNQTKPKLVRALEKVRISCVACGS-RNAHTLAAGDNS------------LWAWGDGSF 3146

Query: 447  GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PV 505
            G+LG  D                NI Q+ CG   SV LT  G VYT G   Y +LG    
Sbjct: 3147 GKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDST 3206

Query: 506  ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
            +   +PT VDG +A   + +VA GA H  ALTS+ +VY+WG   +GQ G+        P 
Sbjct: 3207 SVQPIPTLVDG-LASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQ 3265

Query: 566  LVDFLKDKQVKRVVCG 581
            +V  LK  ++ ++ CG
Sbjct: 3266 IVASLKGHRICKIACG 3281



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 191/384 (49%), Gaps = 30/384 (7%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
            VF WG     G LGG E     S         P+  ES   L+   I  G +    VT  
Sbjct: 3836 VFGWGHN-HRGQLGGIEGNKVKS---------PRLCESLSELNPAMITGGEQTLFAVTDD 3885

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILS--GVNVELVAC--GEYHTCAVTRSGDLY 318
            G++++ G  + GRLG G   +V+ P  +  L+  G+ V+ +A   G  H  AVT  G+LY
Sbjct: 3886 GKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELY 3945

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
             WG+G    G LG G+ V+  +P  +  +L   H+    CG  H+A +T  G L+T+G G
Sbjct: 3946 AWGEG--EDGKLGLGTTVNMNVPHLIE-SLKSKHVIDAGCGSSHSACITDDGSLYTWGKG 4002

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH DH +   P+ V  L+G + T V+CG            S  +    +T+ G +
Sbjct: 4003 RYGRLGHNDHETQHKPKLVSALKGEQVTCVACG------------SGDAQTLCATASGCV 4050

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            F+WGDGD G+LG G  E    P+ +  L  +++ ++ CG   S+ALTT+GHVYT G   Y
Sbjct: 4051 FSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDY 4110

Query: 499  GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    +    P RV G +A   V ++ CG+ H    T + KV++WG    GQ+G+  
Sbjct: 4111 YRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDT 4170

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
                + P  ++   +  +  V CG
Sbjct: 4171 TQAVSVPKRINITDNICIDHVACG 4194



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 173/340 (50%), Gaps = 24/340 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIF 266
            G+  A+G+   G   +G S +  T   L       +A+    I  G +H + VT QGE++
Sbjct: 3886 GKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELY 3945

Query: 267  SWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN 326
            +WGE   G+LG G   +++ P LIE L   +V    CG  H+  +T  G LYTWG G Y 
Sbjct: 3946 AWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRY- 4004

Query: 327  SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALG 384
             G LGH    +   P+ VS  L G  ++ ++CG     T   T++G +F++GDG +G LG
Sbjct: 4005 -GRLGHNDHETQHKPKLVSA-LKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLG 4062

Query: 385  HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
             G +  + +P+++++L G    ++ CG   + A+              T+ G ++TWG G
Sbjct: 4063 RGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMAL--------------TTAGHVYTWGKG 4108

Query: 445  DKGRLGHGDKEPRLFPECVAPLI-DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
            D  RLGHGD   +  P  V  L+  EN+  + CG    +  T SG V++ G    GQ+G 
Sbjct: 4109 DYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGN 4168

Query: 504  PVADGL-VPTRVDGEIAESF-VEEVACGAYHVAALTSTSK 541
                 + VP R++  I ++  ++ VACG+ H  A +S  +
Sbjct: 4169 DTTQAVSVPKRIN--ITDNICIDHVACGSAHSIAWSSKQR 4206



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 163/332 (49%), Gaps = 25/332 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +F WG    G+LG      V  P+L E LS +N  ++  GE    AVT  G +Y  G   
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895

Query: 325  YNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFG 381
            +  G LG GS  +   P  ++     GI +  I+   G  H   VT+ G L+ +G+G  G
Sbjct: 3896 H--GRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LG G  ++ ++P  +E+L+        CG  H+A +              T  G L+TW
Sbjct: 3954 KLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACI--------------TDDGSLYTW 3999

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL--TTSGHVYTMGSAAYG 499
            G G  GRLGH D E +  P+ V+ L  E +  VACG   +  L  T SG V++ G   YG
Sbjct: 4000 GKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYG 4059

Query: 500  QLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG    +G  VP ++D  +    V ++ CG+    ALT+   VYTWGKG   +LGHGD 
Sbjct: 4060 KLGRGGNEGSKVPKKIDS-LTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD 4118

Query: 559  DNRNSP-TLVDFLKDKQVKRVVCGLNFTAIIC 589
             ++ +P  ++  L  + V  + CG +   I+C
Sbjct: 4119 SHQRTPRRVLGLLAHENVIDIGCG-SLHCIVC 4149



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA--CGARHAVL 258
            G VF  GEG ++G LG G    G++  R     +P  + S     V  +A  C  RH + 
Sbjct: 2977 GKVFACGEG-SSGRLGIG----GFANIR-----MPHQISSLSMYVVRKVAVSCAGRHVLA 3026

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            VT  G++FSWG+   G+LGHG       P++IEI    ++  V+CG  H+ AV+ +G+L+
Sbjct: 3027 VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELF 3086

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LFTFGD 377
            TWG G    G LGHG   +   P+ V   L+ + +S ++CG  +   + +  + L+ +GD
Sbjct: 3087 TWGQGA--DGRLGHGDSNNQTKPKLVRA-LEKVRISCVACGSRNAHTLAAGDNSLWAWGD 3143

Query: 378  GSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            GSFG LG  D   ST +P +V T       ++ CG+ H + ++             T  G
Sbjct: 3144 GSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECGM-HFSVLL-------------TKEG 3188

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            K++TWG G+  RLG+     +  P  V  L  + I QVA G    +ALT+SG VY+ G  
Sbjct: 3189 KVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDN 3248

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
             +GQ G          ++   +    + ++ACG+ H  A    S
Sbjct: 3249 EHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQGS 3292



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 171/360 (47%), Gaps = 29/360 (8%)

Query: 238  VESTMALDVHNIACGARHAVLVTKQ--GEIFSWGEESGGRLGHG-READVSHPQLIEILS 294
            V+  +  D +N+    R  +L T     ++F WG     +LG    EA V  P     L+
Sbjct: 2897 VDDALDDDTNNMYSRRRLDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLA 2956

Query: 295  GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHL 353
             ++    A G   +  V+  G ++  G+G+  SG LG G   +  +P ++S  ++  +  
Sbjct: 2957 RLHPIQFAGGSKCSFVVSDDGKVFACGEGS--SGRLGIGGFANIRMPHQISSLSMYVVRK 3014

Query: 354  SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
              +SC   H   VT+ G +F++GDG +G LGHG   S   P+ +E  +      VSCG  
Sbjct: 3015 VAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTG 3074

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            H+AAV V               G+LFTWG G  GRLGHGD   +  P+ V  L    I  
Sbjct: 3075 HSAAVSVN--------------GELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISC 3120

Query: 474  VACGHDLSVALTTSGH-VYTMGSAAYGQLGVPVADGLVPTRVDGEIA--ESFVEEVACGA 530
            VACG   +  L    + ++  G  ++G+LG+   DG   T V  ++    S + ++ CG 
Sbjct: 3121 VACGSRNAHTLAAGDNSLWAWGDGSFGKLGL--KDGSSSTDVPVQVITFPSNIIQIECGM 3178

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +    LT   KVYTWGKG   +LG+     +  PTLVD L  K + +V  G    A+ CL
Sbjct: 3179 HFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVG----ALHCL 3234



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 173/335 (51%), Gaps = 24/335 (7%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           +H V++T  G +F   + S   +G      +  P   EI   + ++    G  H  A+T+
Sbjct: 473 KHRVVLTVHGTVFYVMDAS---MGDFTVEQLFFPGDEEI---IQIDHNPSGN-HILALTK 525

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G +Y+WG G+  +G+LG G+  S   P  V+  L G  + +IS G  H+A VT  G L+
Sbjct: 526 DGKVYSWGQGS--NGVLGIGNTESQTAPTAVAA-LSGDRIVHISAGSMHSAAVTEDGVLY 582

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T+G GS+G LGHG+     IP  VE L G++  +V CG     A  +A D +        
Sbjct: 583 TWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCG--SGDAHTLALDDT-------- 632

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYT 492
             G++++WGDGD G+LG    +    P+ ++ +   + + ++ CG+ +S+ALT  G +Y+
Sbjct: 633 --GQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYS 690

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G     QLG    + +   ++   ++E+ V +V+ GA H  ALT+ S VY WGK ++ +
Sbjct: 691 WGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFE 750

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           +     D  +SP +++    K    + CG + T +
Sbjct: 751 VNESG-DIISSPLMIEAASGKGALLIACGASETFV 784



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 14/225 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G +NG LG     +G + S+      P AV +     + +I+ G+ H+  VT
Sbjct: 527 GKVYSWGQG-SNGVLG-----IGNTESQTA----PTAVAALSGDRIVHISAGSMHSAAVT 576

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
           + G +++WG+ S GRLGHG   D   P ++E L+GV +  V C  G+ HT A+  +G ++
Sbjct: 577 EDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LG        +P+ +SG      +  I CG   +  +T  G L+++G G
Sbjct: 637 SWGDGDY--GKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCG 694

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
               LGHG+      P+ +E L     + VS G  H  A+   +D
Sbjct: 695 DTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD 739



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 99/233 (42%), Gaps = 26/233 (11%)

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +F +G    G LG  +      PR  E+L  L    ++ G     AV             
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAV------------- 3882

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC----QVACGHDLSVALTTS 487
             T  GK++  G    GRLG G  +    P  +  L    I      +  G    +A+TT 
Sbjct: 3883 -TDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQ 3941

Query: 488  GHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G +Y  G    G+LG+     + VP  ++  +    V +  CG+ H A +T    +YTWG
Sbjct: 3942 GELYAWGEGEDGKLGLGTTVNMNVPHLIES-LKSKHVIDAGCGSSHSACITDDGSLYTWG 4000

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG------LNFTAIICLHKW 593
            KG  G+LGH D + ++ P LV  LK +QV  V CG      L  TA  C+  W
Sbjct: 4001 KGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSW 4053



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSG 488
            S  T   K+F WG  D  +LG    E ++  P     L   +  Q A G   S  ++  G
Sbjct: 2918 STDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDG 2977

Query: 489  HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE---SFVEEVA--CGAYHVAALTSTSKVY 543
             V+  G  + G+LG+    G    R+  +I+      V +VA  C   HV A+T+  KV+
Sbjct: 2978 KVFACGEGSSGRLGI---GGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVF 3034

Query: 544  TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            +WG G  GQLGHG   + + P +++  + K ++ V CG   +A + ++
Sbjct: 3035 SWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVN 3082



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 12/133 (9%)

Query: 191 GSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD-VHN 248
           G AH    D  G V+ WG+G   G LG    R G   ++     +PK +    +   V  
Sbjct: 622 GDAHTLALDDTGQVWSWGDG-DYGKLG----RPGSDQNK-----VPKPISGIGSTSPVVK 671

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I CG + ++ +TK G+++SWG     +LGHG +  V  P+LIE LS   V  V+ G  H 
Sbjct: 672 IICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHC 731

Query: 309 CAVTRSGDLYTWG 321
            A+T   D+Y WG
Sbjct: 732 VALTTDSDVYAWG 744



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 11/116 (9%)

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           V LT  G V+ +  A+ G     V     P   D EI +  ++    G  H+ ALT   K
Sbjct: 476 VVLTVHGTVFYVMDASMGDF--TVEQLFFPG--DEEIIQ--IDHNPSGN-HILALTKDGK 528

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
           VY+WG+G+NG LG G+ +++ +PT V  L   ++  +  G   +A +     L+ W
Sbjct: 529 VYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTW 584



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG G       G +  V     RQ     PK +E      V +++ GA+H V +T
Sbjct: 686 GKLYSWGCGDTYQLGHGNQEHV-----RQ-----PKLIEGLSETVVSDVSVGAQHCVALT 735

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
              ++++WG+ S   +    +  +S P +IE  SG    L+ACG   T
Sbjct: 736 TDSDVYAWGKNSSFEVNESGDI-ISSPLMIEAASGKGALLIACGASET 782


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 188/352 (53%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   ES   L   +IA G++   +V+++G++++ GE + GRLG G + +   P+ I  L
Sbjct: 2932 LPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFL 2991

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG+  S   PR +  +L   
Sbjct: 2992 SQYVIKKVAVHSGGKHALALTQDGRVFSWGEG--EDGKLGHGNCSSLDKPRLIE-SLKSK 3048

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  ++CG  H+A +TS+G L+T+G G +G LGHGD  +   P+ V++L G R  +V+CG
Sbjct: 3049 RIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACG 3108

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        S  +     T+ G +++WGDGD G+LG G  +    P  V  L    +
Sbjct: 3109 ------------SRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV 3156

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             Q+ CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  +  VA G
Sbjct: 3157 VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRKPTLVEGLRGKKVIH-VAVG 3214

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T T +VY WG   +GQ G+G       P+LV  L D +V RV CG
Sbjct: 3215 ALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3266



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 187/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +  G +  
Sbjct: 3892 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPVLCESLSALRPVQLTGGEQTL 3941

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G++++ G  + GRLG G    V  P L+E +  V V+ VA   G  H  A++  
Sbjct: 3942 FAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4001

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG+++S   P+ +   L G  +  ++CG  H+A +TSAG L+T
Sbjct: 4002 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDVACGGHHSAAITSAGWLYT 4058

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P+ VE L+  +   V+CG      + V  D +         
Sbjct: 4059 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN--------- 4109

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG +YT G
Sbjct: 4110 ---VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWG 4166

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A +   +V+TWG    GQLG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G       P LV  L+ K++ RV CG
Sbjct: 4227 DGTTCALQRPRLVHALQGKKITRVACG 4253



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 25/342 (7%)

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            ++  V   +   ++ WG     +LG  + + +  P   E LS +    +A G      V+
Sbjct: 2899 SQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVS 2958

Query: 313  RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGH 371
            + G LY  G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G 
Sbjct: 2959 QEGKLYACGEGT--NGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGR 3016

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +F++G+G  G LGHG+  S   PR +E+L+  R   V+CG  H+AA+             
Sbjct: 3017 VFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAI------------- 3063

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGH 489
             TS G+L+TWG G+ GRLGHGD   +L P+ V  L+ + + QVACG     ++ALT  G 
Sbjct: 3064 -TSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGS 3122

Query: 490  VYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            VY+ G   +G+LG   +DG   P  VD  +    V ++ CGA    ALT   +V+TWGKG
Sbjct: 3123 VYSWGDGDFGKLGRGGSDGCYTPLLVD-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3181

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               +LGHG+  +   PTLV+ L+ K+V  V  G    A+ CL
Sbjct: 3182 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVG----ALHCL 3219



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGE 264
            G+  A G+   G   +G + S     ++P  +ES   + V  +A   G +H + ++ +G 
Sbjct: 3948 GKVYATGYGAVGRLGIGGTDS----VMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 4003

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++SWGE   G+LGHG       P+LIE L G  +  VACG +H+ A+T +G LYTWG G 
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGA 382
            Y  G LGHG       P+ V   L    +  ++CG     T  VT   +++++GDG +G 
Sbjct: 4064 Y--GRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4120

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G      +P ++E+L GL   +V CG   + A+              T  G ++TWG
Sbjct: 4121 LGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVAL--------------TRSGSIYTWG 4166

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
             GD  RLGHG  +    P  VA L  + I  +A G    VA +  G V+T G    GQLG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226

Query: 503  VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
                  L   R+   +    +  VACG+ H  A ++
Sbjct: 4227 DGTTCALQRPRLVHALQGKKITRVACGSAHTLAWST 4262



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 172/348 (49%), Gaps = 37/348 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G ++  GEG  NG LG G+           +A  PK +       +  +A   G +HA+ 
Sbjct: 2961 GKLYACGEG-TNGRLGLGD---------DGNACEPKPIPFLSQYVIKKVAVHSGGKHALA 3010

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T+ G +FSWGE   G+LGHG  + +  P+LIE L    +  VACG  H+ A+T SG+LY
Sbjct: 3011 LTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELY 3070

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V  +L G  +  ++CG     T  +T+ G ++++G
Sbjct: 3071 TWGLGEY--GRLGHGDTNTQLKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3127

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G       P  V+ L GL   ++ CG   + A+              T  G
Sbjct: 3128 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLAL--------------TKYG 3173

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG+      P  V  L  + +  VA G    +A+T +G VY  G  
Sbjct: 3174 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDN 3233

Query: 497  AYGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             +GQ G      +V   P+ V  E+ ++ V  V+CG+ H  A   T +
Sbjct: 3234 DHGQQG--NGSTIVNKKPSLVH-ELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 176/378 (46%), Gaps = 28/378 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   ++   L +  + C  R  ++++  G ++         + +G E    +PQ +   S
Sbjct: 453 PFYCDAIAELGIKQLCCTERALMILSTSGNVY--------MMYYGSET--QYPQRVYGFS 502

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              V ++A      H  A+T    +Y+WG+G  + G LGHG +     P+ +   +D  +
Sbjct: 503 DKFVAMIASHPDGKHYLALTEDSSVYSWGNG--DGGRLGHGDRTWYEEPKLIESLVDK-N 559

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++I+CG  ++A ++S G L+T+G G++G LGHG+     +P  V  L G     V+CG 
Sbjct: 560 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGS 619

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             +  + V            T+ G +F+WGDGD G+LG G       P+ V  L+D N+ 
Sbjct: 620 GDSQTLCV------------TASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVA 667

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +V CG   S ALT  G VYT G     +LG    + +   +    +    V+E+  G+ H
Sbjct: 668 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLH 727

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V ALT    VY WG+   GQ+        + PTL   L  K V  +VCG   +   C   
Sbjct: 728 VLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWCTSA 787

Query: 593 W-VSSVDHSVCSSCHNPF 609
           W V+S    V   C + F
Sbjct: 788 WSVASRVAFVVDICEDTF 805



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 152/304 (50%), Gaps = 29/304 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G      S+ R      PK +E  +  
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHGNR---LSYDR------PKLIEELLGT 4035

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ ++ACG  H+  +T  G +++WG+   GRLGHG   D   P+L+E L    V  VACG
Sbjct: 4036 EIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4095

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4096 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPMKIE-SLAGLGVIKVECGSQF 4152

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4153 SVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC---- 4208

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      +  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 4209 ----------SDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258

Query: 483  ALTT 486
            A +T
Sbjct: 4259 AWST 4262



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 40/323 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG    G  G       S P   + ++ + ++ + C E     ++ SG++Y    G
Sbjct: 437 EVLAWGSVKFGGTG-------SSPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYG 489

Query: 324 T---YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           +   Y   + G   K    I     G               H   +T    ++++G+G  
Sbjct: 490 SETQYPQRVYGFSDKFVAMIASHPDGK--------------HYLALTEDSSVYSWGNGDG 535

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHGD      P+ +E+L     T ++CG  ++AA+              +S G+L+T
Sbjct: 536 GRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL--------------SSNGELYT 581

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAY 498
           WG G+ GRLGHG+ +  + P  V+ L    I  VACG     ++ +T SG V++ G   Y
Sbjct: 582 WGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDY 641

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           G+LG    +G    ++  ++ +  V +V CG    AALT+  +VYTWGKG   +LGHG++
Sbjct: 642 GKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNE 701

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
           ++   P  ++ LK K+VK +  G
Sbjct: 702 EHVRYPKAIEALKTKKVKELCVG 724



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 128/266 (48%), Gaps = 17/266 (6%)

Query: 167  SNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
            S DR    E    +    V+   H SA     S G ++ WG+G   G LG G+       
Sbjct: 4022 SYDRPKLIEELLGTEIVDVACGGHHSAA--ITSAGWLYTWGKG-RYGRLGHGDSE----- 4073

Query: 227  SRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADV 284
                D L PK VE+     V ++ACG+  A  + VT    ++SWG+   G+LG G     
Sbjct: 4074 ----DQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4129

Query: 285  SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
              P  IE L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKV
Sbjct: 4130 KVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHR--LGHGTDDHVRRPRKV 4187

Query: 345  SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            +  L G  +  I+ G  H    +  G +FT+GD   G LG G   +   PR V  L+G +
Sbjct: 4188 AA-LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKK 4246

Query: 405  TTRVSCGVWHTAAVVVATDSSSSSPS 430
             TRV+CG  HT A      + S  P+
Sbjct: 4247 ITRVACGSAHTLAWSTMKATQSRMPA 4272



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 148/318 (46%), Gaps = 37/318 (11%)

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           F     ++++S   G  +        V+ WG G   G LG G+ R  Y          PK
Sbjct: 501 FSDKFVAMIASHPDGKHYLALTEDSSVYSWGNG-DGGRLGHGD-RTWYEE--------PK 550

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
            +ES +  ++  IACG+ ++  ++  GE+++WG  + GRLGHG   DV  P L+  L+G 
Sbjct: 551 LIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGH 610

Query: 297 NVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            +  VAC  G+  T  VT SG +++WGDG Y  G LG G       P+ V   LD I+++
Sbjct: 611 MIVYVACGSGDSQTLCVTASGIVFSWGDGDY--GKLGRGGCNGSKTPKIVDKLLD-INVA 667

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            + CG   +A +T+ G ++T+G G    LGHG+      P+ +E L+  +   +  G  H
Sbjct: 668 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLH 727

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDEN 470
             A+              T    ++ WG  D G+    LG    EP L P     L  +N
Sbjct: 728 VLAL--------------TEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPT----LSGKN 769

Query: 471 ICQVACGHDLSVALTTSG 488
           +  + CG   S A  TS 
Sbjct: 770 VIGLVCGPTQSFAWCTSA 787



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 123/250 (49%), Gaps = 19/250 (7%)

Query: 181  LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
            +  V   S H +A     S G+++ WG G   G LG G+             L PK V+S
Sbjct: 3050 IRDVACGSGHSAA---ITSSGELYTWGLG-EYGRLGHGD---------TNTQLKPKLVQS 3096

Query: 241  TMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
             +   V  +ACG+R A  + +T  G ++SWG+   G+LG G       P L++ L+G+ V
Sbjct: 3097 LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV 3156

Query: 299  ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
              + CG   + A+T+ G+++TWG G Y    LGHG+      P  V G L G  + +++ 
Sbjct: 3157 VQIECGAQFSLALTKYGEVWTWGKGDYFR--LGHGNDHHVRKPTLVEG-LRGKKVIHVAV 3213

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            G  H   VT  G ++ +GD   G  G+G  I    P  V  L   R  RVSCG  H+ A 
Sbjct: 3214 GALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAW 3273

Query: 419  VVATDSSSSS 428
            V+ TD  +++
Sbjct: 3274 VL-TDQPAAN 3282



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +   +  +L  +    ++ G      VT+ G 
Sbjct: 3895 SGAIYGWGHN--HRGQLGGLEGAKVKLPV---LCESLSALRPVQLTGGEQTLFAVTADGK 3949

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 3950 VYATGYGAVGRLGIGGTDSVMMPTLLESIQ------------HVFVKKVAVNSGGKHCLA 3997

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  VACG   S A+T++G +Y
Sbjct: 3998 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLY 4057

Query: 492  TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+  + +  V +VACG+     L  T    V++WG G
Sbjct: 4058 TWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4116

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4117 DYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVAL 4156



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAV---------- 3944

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    + +VA   G    +AL++
Sbjct: 3945 ----TADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSS 4000

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             GHVY+ G    G+LG          ++  E+  + + +VACG +H AA+TS   +YTWG
Sbjct: 4001 EGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWG 4060

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++ +P LV+ L+D +V  V CG      +C+
Sbjct: 4061 KGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4104



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+  G     A+T  G VY  G 
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955

Query: 496  AAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
             A G+LG+   D ++   +   I   FV++VA   G  H  AL+S   VY+WG+G +G+L
Sbjct: 3956 GAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4015

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            GHG++ + + P L++ L   ++  V CG + +A I    W+
Sbjct: 4016 GHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWL 4056



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 6/181 (3%)

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
            +V   +SS     +     ++ WG  DK +LG         P     L       +A G 
Sbjct: 2892 IVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGS 2951

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAAL 536
                 ++  G +Y  G    G+LG+         +    +++  +++VA   G  H  AL
Sbjct: 2952 KTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALAL 3011

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHK 592
            T   +V++WG+G +G+LGHG+  + + P L++ LK K+++ V CG   +A I     L+ 
Sbjct: 3012 TQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYT 3071

Query: 593  W 593
            W
Sbjct: 3072 W 3072


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 184/352 (52%), Gaps = 21/352 (5%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            LP   E    L   +IA G++   +V+++G++++ GE + GRLG G   +V  P+ I  L
Sbjct: 2945 LPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFL 3004

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            S   ++ VA   G  H  A+T+ G +++WG+G    G LGHG++VS   PR +   L   
Sbjct: 3005 SQYIIKKVAVHSGGKHALALTQDGKVFSWGEG--EDGKLGHGNRVSLDKPRLIEA-LKSK 3061

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             +  I+CG  H+A + S G L+T+G G +G LGHGD  +   P+ V+ L G R  +V+CG
Sbjct: 3062 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACG 3121

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                  + +  D            G +++WGDGD G+LG G  +    P  V  L    +
Sbjct: 3122 SRDAQTMALTED------------GSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGV 3169

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACG 529
             QV CG   S+ALT  G V+T G   Y +LG    D  V  PT V+G   +  V  VA G
Sbjct: 3170 VQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-NDHHVRRPTLVEGLRGKKVVH-VAVG 3227

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A H  A+T   +VY WG   +GQ G+G       P+LV  L+D +V RV CG
Sbjct: 3228 ALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACG 3279



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 188/387 (48%), Gaps = 27/387 (6%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            +D  G ++ WG     G LGG E              LP   ES  AL    +A G +  
Sbjct: 3890 WDGSGAIYGWGHN-HRGQLGGLE---------GAKVKLPLPCESLSALRPIQLAGGEQTL 3939

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
              VT  G++++ G  + GRLG G    V  P L+E +  V ++ VA   G  H  A++  
Sbjct: 3940 FAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3999

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G +Y+WG+G  + G LGHG++++   P+ +   L G  +  I+CG  H+A ++SAG L+T
Sbjct: 4000 GHVYSWGEG--DDGKLGHGNRITYDRPKLIEALL-GTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G G +G LGHGD      P  V  L+G +   V+CG      + V  D +         
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDN--------- 4107

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
               +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G
Sbjct: 4108 ---VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWG 4164

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               Y +LG    D +   R    +    +  +A G+ H  A +   +VYTWG    GQLG
Sbjct: 4165 KGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG 4224

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G    + SP LV  L+ K + RV CG
Sbjct: 4225 DGTTHAQQSPRLVHALQGKNITRVACG 4251



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 174/342 (50%), Gaps = 25/342 (7%)

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            A+ A  V +   ++ WG     +LG  + + +  P   E+LS +    +A G      V+
Sbjct: 2912 AQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVS 2971

Query: 313  RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGH 371
            + G LY  G+GT  +G LG G   +   P+ +   +   I    +  G  H   +T  G 
Sbjct: 2972 QEGKLYACGEGT--NGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGK 3029

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +F++G+G  G LGHG+ +S   PR +E L+  R   ++CG  H+AA+             
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI------------- 3076

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGH 489
              S G+L+TWG G+ GRLGHGD    L P+ V  L+ + + QVACG     ++ALT  G 
Sbjct: 3077 -ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135

Query: 490  VYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            VY+ G   +G+LG   +DG   P  VD  +    V +V CGA    ALT   +V+TWGKG
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVD-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3194

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               +LGHG+  +   PTLV+ L+ K+V  V  G    A+ CL
Sbjct: 3195 DYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVG----ALHCL 3232



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 169/349 (48%), Gaps = 39/349 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHR-VGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAV 257
            G ++  GEG  NG LG G++  VG           PK +       +  +A   G +HA+
Sbjct: 2974 GKLYACGEG-TNGRLGLGDNNNVGE----------PKPIPFLSQYIIKKVAVHSGGKHAL 3022

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
             +T+ G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+  +G+L
Sbjct: 3023 ALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGEL 3082

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTF 375
            YTWG G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G ++++
Sbjct: 3083 YTWGLGEY--GRLGHGDTTTHLKPKLVDA-LVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            GDG FG LG G       P  V+ L GL   +V CG   + A+              T  
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLAL--------------TKY 3185

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G+++TWG GD  RLGHG+      P  V  L  + +  VA G    +A+T +G VY  G 
Sbjct: 3186 GEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGD 3245

Query: 496  AAYGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
              +GQ G      +V   P+ V   + ++ V  VACG+ H  A   T +
Sbjct: 3246 NDHGQQG--NGSTMVNRKPSLVH-NLEDAKVNRVACGSSHSIAWVLTDQ 3291



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 29/314 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G V+ WGEG  +G LG G +R+ Y          PK +E+ +  
Sbjct: 3984 VAVNSGGKHCLALSSEGHVYSWGEG-DDGKLGHG-NRITYDR--------PKLIEALLGT 4033

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            ++ +IACG  H+  ++  G +++WG+   GRLGHG   D   P ++  L G  V  VACG
Sbjct: 4034 EIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG 4093

Query: 305  --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
              +  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 4094 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPMKIE-SLAGLGVVKVECGSQF 4150

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 4151 SVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVAC---- 4206

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      +  G+++TWGD D+G+LG G    +  P  V  L  +NI +VACG   ++
Sbjct: 4207 ----------SDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTL 4256

Query: 483  ALTTSGHVYTMGSA 496
            A +T+   +++ +A
Sbjct: 4257 AWSTTKATHSLPAA 4270



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 28/350 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +P   ++   + V  + C  R  ++++  G+++         + +G E    +PQ +   
Sbjct: 448 MPFYCDAIAEIGVKQLCCTERALLILSLSGKVY--------MMYYGSET--QYPQSVYGF 497

Query: 294 SGVNVELVACGE-YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           +   V++ +  +  H  A+T  G +Y+WG+G  + G LGHG   SC  P+ +   L    
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNG--DGGRLGHGDSFSCDEPQVIE-VLSDRT 554

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++YI+CG  ++A ++S G L T+G GS+G LGHG     SIP  V  L G   T V+CG 
Sbjct: 555 VTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGS 614

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             +  + V            T+ G +F+WGDGD G+LG G  +    P+ V  L+D+N+ 
Sbjct: 615 GDSQTLCV------------TNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVV 662

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY 531
           +V CG   S ALT  G VYT G   + +LG    + +  P  V+G +    V +++ G  
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEG-LRNKKVRDLSVGNL 721

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           H+ A+T    VY WG+    Q+        + PTL   L  K V  +VCG
Sbjct: 722 HILAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSVIGLVCG 771



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 165/330 (50%), Gaps = 43/330 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ +WG       G G     S P   + ++ + V+ + C E     ++ SG +Y    G
Sbjct: 434 EVLAWGNV---HFGSG-----SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYG 485

Query: 324 T---YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           +   Y   + G    V      +++ + DG H  Y++        +T+ G ++++G+G  
Sbjct: 486 SETQYPQSVYGFADDVV-----QIASHPDGKH--YLA--------LTTKGIVYSWGNGDG 530

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHGD  S   P+ +E L     T ++CG  ++AA+              +S G+L T
Sbjct: 531 GRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI--------------SSTGELLT 576

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAY 498
           WG G  GRLGHG  +    P  V  L    +  VACG     ++ +T SG V++ G   Y
Sbjct: 577 WGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           G+LG   +DG    ++  ++ +  V +V CG    AALT+  +VYTWGKG + +LGHG++
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNE 696

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG-LNFTAI 587
           ++   P LV+ L++K+V+ +  G L+  AI
Sbjct: 697 EHVRFPKLVEGLRNKKVRDLSVGNLHILAI 726



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 116/238 (48%), Gaps = 15/238 (6%)

Query: 182  SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            + +V  +  G       S G ++ WG+G   G LG G+           D L P  V + 
Sbjct: 4033 TEIVDIACGGHHSAAISSAGWLYTWGKG-RYGRLGHGD---------SDDQLKPTVVTAL 4082

Query: 242  MALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                V ++ACG+  A  + VT    ++SWG+   G+LG G       P  IE L+G+ V 
Sbjct: 4083 QGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVV 4142

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             V CG   + A+TRSG +YTWG G Y+   LGHG+      PRKVS  L G  +  I+ G
Sbjct: 4143 KVECGSQFSVALTRSGAVYTWGKGDYHR--LGHGTDDHVRRPRKVSA-LQGKKIVSIATG 4199

Query: 360  LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
              H    +  G ++T+GD   G LG G   +   PR V  L+G   TRV+CG  HT A
Sbjct: 4200 SLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 146/312 (46%), Gaps = 39/312 (12%)

Query: 184 VVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           VV  +SH  G  +    + G V+ WG G       GG  R+G+  S   D   P+ +E  
Sbjct: 501 VVQIASHPDGKHYLALTTKGIVYSWGNG------DGG--RLGHGDSFSCDE--PQVIEVL 550

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
               V  IACG+ ++  ++  GE+ +WG  S GRLGHG   D+S P ++  L+G  V  V
Sbjct: 551 SDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHV 610

Query: 302 AC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           AC  G+  T  VT SG +++WGDG Y  G LG G      +P+ V   LD  ++  + CG
Sbjct: 611 ACGSGDSQTLCVTNSGIVFSWGDGDY--GKLGRGGSDGSKLPKIVDKLLDQ-NVVKVFCG 667

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              +A +T+ G ++T+G G    LGHG+      P+ VE LR  +   +S G  H  A+ 
Sbjct: 668 GQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAI- 726

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVA 475
                        T    ++ WG  D  +    LG    EP L P     L  +++  + 
Sbjct: 727 -------------TEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPT----LSGKSVIGLV 769

Query: 476 CGHDLSVALTTS 487
           CG   S A + S
Sbjct: 770 CGPMQSFAWSMS 781



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV   +P +    L  I L+     L+    VT+ G 
Sbjct: 3893 SGAIYGWGHN--HRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLF---AVTADGK 3947

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++  G G+ G LG G   S  +P  +E+++            H     VA +S       
Sbjct: 3948 VYATGYGALGRLGTGGVDSVMVPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3995

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G +++WG+GD G+LGHG++     P+ +  L+   I  +ACG   S A++++G +Y
Sbjct: 3996 LSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLY 4055

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKGA 549
            T G   YG+LG   +D  +   V   +    V +VACG+     L  T    V++WG G 
Sbjct: 4056 TWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4115

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4116 YGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVAL 4154



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 4/162 (2%)

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T+ G +++WG+GD GRLGHGD      P+ +  L D  +  +ACG   S A++++G + T
Sbjct: 517 TTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLT 576

Query: 493 MGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            G  +YG+LG  + D + +PT V   +    V  VACG+       +T++  V++WG G 
Sbjct: 577 WGRGSYGRLGHGICDDISIPTVVTA-LNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGD 635

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            G+LG G  D    P +VD L D+ V +V CG  F+A +  H
Sbjct: 636 YGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 24/228 (10%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E+L  LR  +++ G     AV          
Sbjct: 3893 SGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAV---------- 3942

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GK++  G G  GRLG G  +  + P  +  +    I +VA   G    +AL++
Sbjct: 3943 ----TADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 3998

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKV 542
             GHVY+ G    G+LG     G   T    ++ E+     + ++ACG +H AA++S   +
Sbjct: 3999 EGHVYSWGEGDDGKLG----HGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054

Query: 543  YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            YTWGKG  G+LGHGD D++  PT+V  L+  +V  V CG      +C+
Sbjct: 4055 YTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCV 4102



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G ++ WG   +G+LG  +      P     L      Q+A G     A+T  G VY  G 
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGY 3953

Query: 496  AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
             A G+LG    D  +VPT ++  I   F+++VA   G  H  AL+S   VY+WG+G +G+
Sbjct: 3954 GALGRLGTGGVDSVMVPTLLE-SIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4012

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            LGHG++   + P L++ L   ++  + CG + +A I    W+
Sbjct: 4013 LGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
            VV    ++   S       ++ WG  DK +LG         P     L       +A G 
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGS 2964

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAAL 536
                 ++  G +Y  G    G+LG+   + +   +    +++  +++VA   G  H  AL
Sbjct: 2965 KTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALAL 3024

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHK 592
            T   KV++WG+G +G+LGHG++ + + P L++ LK K+++ + CG   +A I     L+ 
Sbjct: 3025 TQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYT 3084

Query: 593  W 593
            W
Sbjct: 3085 W 3085



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 459 FPECVAPLIDENICQVACGHDLS--VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG 516
           +P+ V    D+ + Q+A   D    +ALTT G VY+ G+   G+LG   +      +V  
Sbjct: 490 YPQSVYGFADD-VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIE 548

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            +++  V  +ACG+ + AA++ST ++ TWG+G+ G+LGHG  D+ + PT+V  L    V 
Sbjct: 549 VLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVT 608

Query: 577 RVVCGLNFTAIICL 590
            V CG   +  +C+
Sbjct: 609 HVACGSGDSQTLCV 622


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/313 (36%), Positives = 175/313 (55%), Gaps = 27/313 (8%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E++SWG+   G+LGHG E     P+L+    G NV  V+CG  HT  +  +G+++T+G G
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66

Query: 324 TYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
             N G LG G+ V+  +  P  VS  L G H+  ++CG  HT  +   G L+T+G G +G
Sbjct: 67  --NFGQLGQGASVTANVSTPALVS-ALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYG 123

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD +  + P+ VE+L+G   T V+ G +H++ ++                G L TW
Sbjct: 124 RLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVII--------------EGGNLLTW 169

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G G  G+LGHGD+  R  P+ V  +      +VACG   ++ LT S  V+T GS  +G+L
Sbjct: 170 GGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKL 229

Query: 502 GV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           G+      A+ ++ T + G      V  ++ G +H AALTS   +YTWG G  GQLGHGD
Sbjct: 230 GIGDEEKHAEPIMITALQG----VGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGD 285

Query: 558 KDNRNSPTLVDFL 570
           ++++N P +V+ +
Sbjct: 286 ENSQNIPVVVEVI 298



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 166/303 (54%), Gaps = 29/303 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG+G+  G LG G+ +      RQ     P+ V + +  +V  ++CG +H  ++ +
Sbjct: 7   EVYSWGQGVL-GQLGHGDEKT----QRQ-----PRLVVAFLGFNVRQVSCGNQHTAILME 56

Query: 262 QGEIFSWGEESGGRLGHGRE--ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            GE+F++G  + G+LG G    A+VS P L+  L G +V+ VACG +HTCA+  +G LYT
Sbjct: 57  NGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYT 116

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG G Y  G LGHG +V    P+ V  +L G  +++++ G +H++V+   G+L T+G G 
Sbjct: 117 WGSGEY--GRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGY 173

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           FG LGHGD      P+ V+ ++      V+CG  HT  +              T   +++
Sbjct: 174 FGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLML--------------TQSQEVW 219

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           TWG G+ G+LG GD+E    P  +  L    +  ++ G   S ALT+ G +YT G    G
Sbjct: 220 TWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKG 279

Query: 500 QLG 502
           QLG
Sbjct: 280 QLG 282



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 144/275 (52%), Gaps = 22/275 (8%)

Query: 311 VTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           ++R G ++Y+WG G    G LGHG + +   PR V   L G ++  +SCG  HTA++   
Sbjct: 1   MSREGSEVYSWGQGVL--GQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMEN 57

Query: 370 GHLFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           G +FTFG G+FG LG G  ++ ++  P  V  L+G    +V+CG  HT A++        
Sbjct: 58  GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALI-------- 109

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                   G+L+TWG G+ GRLGHGD+  +  P+ V  L  + +  VA G   S  +   
Sbjct: 110 ------DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEG 163

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G++ T G   +GQLG     D   P  V G + +    EVACG +H   LT + +V+TWG
Sbjct: 164 GNLLTWGGGYFGQLGHGDETDRKTPKMVKG-VQQCIAHEVACGTHHTLMLTQSQEVWTWG 222

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  G+LG GD++    P ++  L+   V  +  G
Sbjct: 223 SGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTG 257



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 25/263 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+VF +G G           ++G   S   +   P  V +     V  +ACG  H   + 
Sbjct: 58  GEVFTFGRGNFG--------QLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALI 109

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++++WG    GRLGHG E   + P+L+E L G  V  VA G +H+  +   G+L TW
Sbjct: 110 DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G +  G LGHG +     P+ V G    I    ++CG  HT ++T +  ++T+G G F
Sbjct: 170 GGGYF--GQLGHGDETDRKTPKMVKGVQQCI-AHEVACGTHHTLMLTQSQEVWTWGSGEF 226

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG GD    + P  +  L+G+    +S G +H+AA+              TS G L+T
Sbjct: 227 GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAAL--------------TSEGVLYT 272

Query: 441 WGDGDKGRLGHGDKEPRLFPECV 463
           WG GDKG+LGHGD+  +  P  V
Sbjct: 273 WGGGDKGQLGHGDENSQNIPVVV 295



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 24/223 (10%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++++G G  G LGHGD  +   PR V    G    +VSCG  HTA ++            
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILM------------ 55

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLF--PECVAPLIDENICQVACGHDLSVALTTSGH 489
               G++FT+G G+ G+LG G         P  V+ L  +++ QVACG   + AL  +G 
Sbjct: 56  --ENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ 113

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTW 545
           +YT GS  YG+LG     G    +   ++ ES     V  VA G +H + +     + TW
Sbjct: 114 LYTWGSGEYGRLG----HGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G G  GQLGHGD+ +R +P +V  ++      V CG + T ++
Sbjct: 170 GGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLML 212



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 4/155 (2%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           ++++WG G  G+LGHGD++ +  P  V   +  N+ QV+CG+  +  L  +G V+T G  
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66

Query: 497 AYGQLGVPV---ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            +GQLG      A+   P  V   +    V++VACG +H  AL    ++YTWG G  G+L
Sbjct: 67  NFGQLGQGASVTANVSTPALVS-ALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRL 125

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GHGD+  + SP LV+ L+ K+V  V  G   +++I
Sbjct: 126 GHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVI 160



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 31/49 (63%)

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           S+VY+WG+G  GQLGHGD+  +  P LV       V++V CG   TAI+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL 54



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  + +   + V +I+ G  H+  +T +G +++WG    G+LGHG E   + P ++E++S
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEVIS 299


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 200/386 (51%), Gaps = 36/386 (9%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E   AL V  IA G++    V+
Sbjct: 2423 VFVWGLNDKDQLGGLKGSKIKV------------PVLSEFIGALKVQQIAGGSKTLFAVS 2470

Query: 261  KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
              G++F+ GE + GRLG G   A+V+ P+ IE LS   V  V+   G  H  A+T  G L
Sbjct: 2471 HDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKL 2530

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G    G LGHG++++C  P+ +        +  +SCG  H+A + S+G L+T+G 
Sbjct: 2531 FSWGEG--EDGKLGHGNRMNCDHPKLID-TFKSSCVRDMSCGSSHSAAILSSGELYTWGL 2587

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P++V++    R   ++CG      + +  D            G 
Sbjct: 2588 GEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDD------------GT 2635

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +++WGDGD G+LG G  E    P  V  L  + +C+VACG   S+AL+TSG V+T G   
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGD 2695

Query: 498  YGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            Y +LG    D  V  P  VDG   +  V+ VA GA H  A+T + +V+ WG   +GQ G+
Sbjct: 2696 YYRLGHG-NDTHVRKPQIVDGLRGKKIVD-VAVGALHCLAVTDSGQVFAWGDNDHGQQGN 2753

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCG 581
                    P LV+ L+ +++ RV CG
Sbjct: 2754 NTTTVNRRPQLVNGLEGQKITRVACG 2779



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 190/378 (50%), Gaps = 21/378 (5%)

Query: 207  GEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIF 266
            G G   G+  G  HR            LP+ +E+  ++    I  G +    VT +G+++
Sbjct: 3352 GSGTIYGW--GHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVY 3409

Query: 267  SWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGT 324
            + G   GGRLG G    V+  +++E L  V V  VA   G  H  A++  GD+Y+WG+G 
Sbjct: 3410 ATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEG- 3468

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             + G LGHG++ SC  PR +   L G  +  ISCG  H+A +T    L+T+G G +G LG
Sbjct: 3469 -DDGKLGHGNRNSCDRPRVIEA-LRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLG 3526

Query: 385  HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            HGD     +P+ VE LRG R   V+CG      + +  D              +++WGDG
Sbjct: 3527 HGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC------------VWSWGDG 3574

Query: 445  DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
            D G+LG G  +    P  V  LI   + +V CG   SVALT SG VYT G   Y +LG  
Sbjct: 3575 DYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHG 3634

Query: 505  VADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
            V D +  P RV     +  +  +A G+ H  A T T +VYTWG    GQLG G  +    
Sbjct: 3635 VDDHVRRPKRVAALQGKKVI-TIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIAR 3693

Query: 564  PTLVDFLKDKQVKRVVCG 581
            P LV  L+ K++ RV CG
Sbjct: 3694 PRLVTALQGKKISRVACG 3711



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 167/338 (49%), Gaps = 28/338 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF  GE   NG LG G      +  RQ + L      S+  +   ++  G RHA+ +T
Sbjct: 2473 GKVFACGES-TNGRLGLGPLSANVTVPRQIENL------SSFMVRKVSVHSGGRHAMALT 2525

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             +G++FSWGE   G+LGHG   +  HP+LI+      V  ++CG  H+ A+  SG+LYTW
Sbjct: 2526 IEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTW 2585

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+KV  +     +  I+CG     T  +T  G ++++GDG
Sbjct: 2586 GLGEY--GRLGHGDNYTHLKPKKVQ-SFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDG 2642

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     S+P  VE L+G    +V+CG   + A+              ++ G +
Sbjct: 2643 DFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLAL--------------STSGLV 2688

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG+      P+ V  L  + I  VA G    +A+T SG V+  G   +
Sbjct: 2689 WTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDH 2748

Query: 499  GQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAA 535
            GQ G         P  V+G +    +  VACG+ H  A
Sbjct: 2749 GQQGNNTTTVNRRPQLVNG-LEGQKITRVACGSSHSIA 2785



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 236  KAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            K +ES   + V  +A   G +HA+ ++  G+++SWGE   G+LGHG       P++IE L
Sbjct: 3431 KMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEAL 3490

Query: 294  SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             G  V  ++CG  H+  +T++ +LYTWG G Y  G LGHG      +P+ V   L G  +
Sbjct: 3491 RGKGVIDISCGGSHSACITQNHELYTWGKGRY--GRLGHGDSEDQLLPKVVEA-LRGNRV 3547

Query: 354  SYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
              ++CG     T  +T    ++++GDG +G LG G      IP +VE+L GL  ++V CG
Sbjct: 3548 IDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECG 3607

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
               + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  + +
Sbjct: 3608 SQFSVAL--------------TRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKV 3653

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
              +A G    VA T +G VYT G    GQLG    + +   R+   +    +  VACG+ 
Sbjct: 3654 ITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSA 3713

Query: 532  HVAALTSTSKV 542
            H  A ++   V
Sbjct: 3714 HTIAWSTCKPV 3724



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 147/279 (52%), Gaps = 21/279 (7%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           +H + +T++GE++SWG   GG+LGHG  +    P L+  L+G  V  ++CG  H+ AVT 
Sbjct: 27  KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTS 86

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGH 371
            G+LYTWG G Y  G LGHGS     +P  VSG L G H+  ++CG    HT      G 
Sbjct: 87  EGELYTWGRGNY--GRLGHGSSEDQLVPVLVSG-LRGHHIIDVACGSGDAHTLAAADDGT 143

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++++GDG +G LG G       P+ +E L+GL   +V CG   + A+             
Sbjct: 144 VWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLAL------------- 190

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G ++TWG G+  RLGHG ++    P+ V  L  +++  V+ G    +ALT +G VY
Sbjct: 191 -TRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVY 249

Query: 492 TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACG 529
             G    GQLG +       PT V G +A   +  +ACG
Sbjct: 250 CWGRNDQGQLGDIDCQIRPEPTLVSG-LASKGIVGIACG 287



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 138/275 (50%), Gaps = 15/275 (5%)

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H  A+TR G++Y+WG G  + G LGHG       P  V+G L G  +  ISCG  H+A V
Sbjct: 28  HFLALTREGEVYSWGSG--DGGKLGHGDTSPREEPTLVTG-LAGKQVIRISCGSTHSAAV 84

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           TS G L+T+G G++G LGHG      +P  V  LRG     V+CG      +  A D   
Sbjct: 85  TSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADD--- 141

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                    G +++WGDGD G+LG G  +    P+ +  L    +C+V CG   S+ALT 
Sbjct: 142 ---------GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR 192

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G V+T G     +LG    D +   ++   +    V +V+ G+ H  ALT   +VY WG
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 252

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +   GQLG  D   R  PTLV  L  K +  + CG
Sbjct: 253 RNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 174/335 (51%), Gaps = 28/335 (8%)

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            Q ++F WG     +LG  + + +  P L E +  + V+ +A G     AV+  G ++  G
Sbjct: 2420 QIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479

Query: 322  DGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDG 378
            + T  +G LG G    +  +PR++  NL    +  +S   G  H   +T  G LF++G+G
Sbjct: 2480 EST--NGRLGLGPLSANVTVPRQIE-NLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEG 2536

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
              G LGHG+ ++   P+ ++T +      +SCG  H+AA++              S G+L
Sbjct: 2537 EDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAIL--------------SSGEL 2582

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSA 496
            +TWG G+ GRLGHGD    L P+ V       +  +ACG     ++ALT  G V++ G  
Sbjct: 2583 YTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDG 2642

Query: 497  AYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             +G+LG   ++G  VP  V+ ++    V +VACGA    AL+++  V+TWGKG   +LGH
Sbjct: 2643 DFGKLGRGGSEGCSVPNPVE-KLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH 2701

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            G+  +   P +VD L+ K++  V  G    A+ CL
Sbjct: 2702 GNDTHVRKPQIVDGLRGKKIVDVAVG----ALHCL 2732



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 150/290 (51%), Gaps = 33/290 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            GDV+ WGEG  +G LG G      S  R      P+ +E+     V +I+CG  H+  +T
Sbjct: 3460 GDVYSWGEG-DDGKLGHGNRN---SCDR------PRVIEALRGKGVIDISCGGSHSACIT 3509

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            +  E+++WG+   GRLGHG   D   P+++E L G  V  VAC  G+  T  +T    ++
Sbjct: 3510 QNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVW 3569

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C IP KV  +L G+ +S + CG   +  +T +G ++T+G G
Sbjct: 3570 SWGDGDY--GKLGRGGSDGCKIPMKVE-SLIGLGVSKVECGSQFSVALTRSGAVYTWGKG 3626

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             +  LGHG  DH+    P+ V  L+G +   ++ G  H  A              ST  G
Sbjct: 3627 DYYRLGHGVDDHVRR--PKRVAALQGKKVITIATGSLHCVA--------------STDTG 3670

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
            +++TWGD D+G+LG G       P  V  L  + I +VACG   ++A +T
Sbjct: 3671 EVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWST 3720



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 138/291 (47%), Gaps = 29/291 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG G       GG+   G +  R+     P  V       V  I+CG+ H+  VT
Sbjct: 36  GEVYSWGSG------DGGKLGHGDTSPREE----PTLVTGLAGKQVIRISCGSTHSAAVT 85

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            +GE+++WG  + GRLGHG   D   P L+  L G ++  VAC  G+ HT A    G ++
Sbjct: 86  SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LG G    C  P+ +   L G+ +  + CG   +  +T  G ++T+G G
Sbjct: 146 SWGDGDY--GKLGRGGSDGCKNPKSIE-RLQGLGVCKVYCGAQFSLALTRDGSVWTWGKG 202

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
               LGHG       P+ VE L G     VS G  H  A+              T  G++
Sbjct: 203 EGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLAL--------------TDAGEV 248

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           + WG  D+G+LG  D + R  P  V+ L  + I  +ACG   S A + +G 
Sbjct: 249 YCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQ 299



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 4/153 (2%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G++++WG GD G+LGHGD  PR  P  V  L  + + +++CG   S A+T+ G +YT G 
Sbjct: 36  GEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGR 95

Query: 496 AAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQ 552
             YG+LG   + D LVP  V G      + +VACG+   H  A      V++WG G  G+
Sbjct: 96  GNYGRLGHGSSEDQLVPVLVSGLRGHHII-DVACGSGDAHTLAAADDGTVWSWGDGDYGK 154

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           LG G  D   +P  ++ L+   V +V CG  F+
Sbjct: 155 LGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFS 187



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 4/178 (2%)

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            H     VA  S        ++ G +++WG+GD G+LGHG++     P  +  L  + +  
Sbjct: 3438 HVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVID 3497

Query: 474  VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA-- 530
            ++CG   S  +T +  +YT G   YG+LG     D L+P  V+  +  + V +VACG+  
Sbjct: 3498 ISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEA-LRGNRVIDVACGSGD 3556

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                 LT    V++WG G  G+LG G  D    P  V+ L    V +V CG  F+  +
Sbjct: 3557 AQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVAL 3614



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHDLSVALTTSG 488
            SG     K+F WG  DK +LG G K  ++    ++  I    + Q+A G     A++  G
Sbjct: 2415 SGQEGQIKVFVWGLNDKDQLG-GLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDG 2473

Query: 489  HVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTW 545
             V+  G +  G+LG+ P++  +   R    ++   V +V+   G  H  ALT   K+++W
Sbjct: 2474 KVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSW 2533

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSSVDHSV 601
            G+G +G+LGHG++ N + P L+D  K   V+ + CG + +A I     L+ W    ++  
Sbjct: 2534 GEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTW-GLGEYGR 2592

Query: 602  CSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAAL 639
                 N    + K+   +    V   AC SR +   AL
Sbjct: 2593 LGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 2630



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%)

Query: 474  VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
            V  G   ++AL+  G VY+ G    G+LG    +     RV   +    V +++CG  H 
Sbjct: 3446 VHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHS 3505

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            A +T   ++YTWGKG  G+LGHGD +++  P +V+ L+  +V  V CG      +CL
Sbjct: 3506 ACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCL 3562



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC-- 589
           H  ALT   +VY+WG G  G+LGHGD   R  PTLV  L  KQV R+ CG   +A +   
Sbjct: 28  HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87

Query: 590 --LHKW 593
             L+ W
Sbjct: 88  GELYTW 93



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG+G          +R+G+     T    P+ V+      + ++A GA H + VT
Sbjct: 2686 GLVWTWGKG--------DYYRLGHG--NDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVT 2735

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              G++F+WG+   G+ G+        PQL+  L G  +  VACG  H+ A   S DL T
Sbjct: 2736 DSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAES-DLPT 2793


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 193/367 (52%), Gaps = 31/367 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK-QGE 264
           WG G  +G LG G+           D LLP  + +  A  + ++ CGA H +  ++ + E
Sbjct: 39  WGRG-EDGQLGHGD---------TDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVE 88

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  PQ I  L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 89  VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWG--R 146

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 147 NQNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 205

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     IP +V ++   +   V+CG  HT +V              +S G+L+T+G  
Sbjct: 206 LGDRNDRCIPEKV-SVDCDKMVLVACGWRHTISV--------------SSSGELYTYGWS 250

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHGD +  L P  +    D+ ICQV+ G   ++ALTT G +Y  G   +GQ+GV 
Sbjct: 251 KYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVG 310

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     +  V +++CG  H  A+T    VY+WG+G NGQLG GD  + N 
Sbjct: 311 DNVDRCSPVQVKFP-HDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNY 369

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 370 PKIIEAL 376



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 176/342 (51%), Gaps = 21/342 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ G  H+V +     + SWG    G+LGHG   D   P  +  L    +  V CG  HT
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  ++Y+WG G +  G LGHG+    +IP+ +   L G+ +  I+CG  H   VT
Sbjct: 80  LAYSESKVEVYSWGWGDF--GRLGHGNSSDLFIPQPIRA-LQGLRIKQIACGDSHCLAVT 136

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++T +G+    V+ G  H+ A+         
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI--------- 187

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  R  PE V+   D+ +  VACG   ++++++S
Sbjct: 188 -----TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVL-VACGWRHTISVSSS 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP ++    ++  + +V+ G  H  ALT+  ++Y WG
Sbjct: 242 GELYTYGWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +R SP  V F  D++V ++ CG   T  +
Sbjct: 301 WNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAV 342



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 167/323 (51%), Gaps = 30/323 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + SVV  + H  A+ +  S  +V+ WG G           R+G+  S  +D  +P+ + +
Sbjct: 69  IVSVVCGADHTLAYSE--SKVEVYSWGWGDFG--------RLGHGNS--SDLFIPQPIRA 116

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT +GE+ SWG    G+LG G   D   PQ I+   GV +++
Sbjct: 117 LQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKM 176

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+ A+T +G+LY WG G Y  G LG G +    IP KVS + D + L  ++CG 
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRY--GNLGLGDRNDRCIPEKVSVDCDKMVL--VACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G L+T+G   +G LGHGD     +P +++        +VS G  HT A+  
Sbjct: 233 RHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       T+ G+L+ WG    G++G GD   R  P  V    D+ + Q++CG   
Sbjct: 291 ------------TTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLGV 503
           ++A+T   +VY+ G    GQLG+
Sbjct: 339 TIAVTEKDNVYSWGRGTNGQLGI 361



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
           +P     +  ++ G   SVAL +   V + G    GQLG     D L+PT++    A+  
Sbjct: 10  SPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQI 69

Query: 523 VEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           V  V CGA H  A + S  +VY+WG G  G+LGHG+  +   P  +  L+  ++K++ CG
Sbjct: 70  V-SVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACG 128



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D   P  V+      V  I+CG RH + VT++  ++SWG  + G+LG G   D ++P++
Sbjct: 313 VDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKI 372

Query: 290 IEILS 294
           IE LS
Sbjct: 373 IEALS 377


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 187

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 188 -----TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYS 242

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWG 301

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 122

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 179

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV 239

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 240 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 286 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 344

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 345 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 88  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 198 WGRY--GNLGLGDRNDRLVPERVT-SAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL--------------TSDGKLYGW 300

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 301 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360

Query: 502 GV 503
           G+
Sbjct: 361 GI 362



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 187

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 188 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWG 301

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 122

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 179

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 240 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 286 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 344

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 345 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 88  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 198 WGRY--GNLGLGDRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL--------------TSDGKLYGW 300

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 301 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360

Query: 502 GV 503
           G+
Sbjct: 361 GI 362



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 187/369 (50%), Gaps = 31/369 (8%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYS-FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            VF+WG    +   G    +V    FS    AL P          VH IA G++   +V+ 
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRP----------VH-IAGGSKTLFIVSH 3107

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
             G++F+ GE + GRLG G   +VS P+    LS V V  VA   G  H  A+T  G +Y+
Sbjct: 3108 DGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYS 3167

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            WG+G    G LGHG++++   PR +  +L G  +  I+CG  H+A VT+ GHL+T+G G 
Sbjct: 3168 WGEG--EDGKLGHGNRITLEAPRLIE-SLAGERVISIACGSAHSACVTARGHLYTWGLGE 3224

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +G LGHGD     +P+ VE L   R  +V+CG            S  +     T+CGK+F
Sbjct: 3225 YGRLGHGDDNIQLVPKMVEALANYRVIQVACG------------SRDAQTLALTACGKVF 3272

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            +WGDGD G+LG G  +    P  V  L    + QV CG   S+ALT  G V+T G   Y 
Sbjct: 3273 SWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYF 3332

Query: 500  QLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG    A    PT V+       +  VA GA H  A+TS ++V+ WG   +GQ G+G  
Sbjct: 3333 RLGHGCDAHVRRPTLVEALRGRRVI-HVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTT 3391

Query: 559  DNRNSPTLV 567
                 P LV
Sbjct: 3392 CVNRRPALV 3400



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 171/340 (50%), Gaps = 19/340 (5%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P    +  AL+   +  G +    VT  G++++ G  +GGRLG G    VS P L+  + 
Sbjct: 3975 PTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQ 4034

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V +  VAC  G  H  A++  G++Y+WG+G    G LGHG++VS   P+ ++  L G+ 
Sbjct: 4035 HVFITKVACNSGGKHCLALSADGEVYSWGEG--EDGKLGHGNRVSYDRPKLITA-LSGLE 4091

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            +  I+CG  H+A +T+ G ++T+G G +G LGHGD     IP+ VE L   R   V+CG 
Sbjct: 4092 VVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGS 4151

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  E    P  +  L    + 
Sbjct: 4152 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVI 4199

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY 531
            +V CG   SVAL   G VYT G   Y +LG    + +  P RV G   +  V  +A G+ 
Sbjct: 4200 KVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIV-SIATGSL 4258

Query: 532  HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
            H  A T T +VYTWG    GQLG G       P L+  L+
Sbjct: 4259 HCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 170/332 (51%), Gaps = 27/332 (8%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++F WG     +LG  + + V  P     LS +    +A G      V+  G L+  G+G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 324  TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFG 381
            T     LGH + VS   PR  +  L  + +  ++   G  H   +T+ G ++++G+G  G
Sbjct: 3118 TNGRLGLGHSNNVS--TPR-ANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDG 3174

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHG+ I+   PR +E+L G R   ++CG  H+A V              T+ G L+TW
Sbjct: 3175 KLGHGNRITLEAPRLIESLAGERVISIACGSAHSACV--------------TARGHLYTW 3220

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYG 499
            G G+ GRLGHGD   +L P+ V  L +  + QVACG     ++ALT  G V++ G   +G
Sbjct: 3221 GLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFG 3280

Query: 500  QLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG   +DG  +P  V+  +    V +V CGA    ALT   +V+TWGKG   +LGHG  
Sbjct: 3281 KLGRGGSDGCAIPMNVE-RLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCD 3339

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
             +   PTLV+ L+ ++V  V  G    A+ CL
Sbjct: 3340 AHVRRPTLVEALRGRRVIHVAVG----ALHCL 3367



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 151/306 (49%), Gaps = 31/306 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G +F  GEG  NG LG     +G+S +  T    P+A      + V  +A   G +HA+ 
Sbjct: 3109 GKLFACGEG-TNGRLG-----LGHSNNVST----PRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T  G+++SWGE   G+LGHG    +  P+LIE L+G  V  +ACG  H+  VT  G LY
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLY 3218

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG      +P+ V   L    +  ++CG     T  +T+ G +F++G
Sbjct: 3219 TWGLGEY--GRLGHGDDNIQLVPKMVEA-LANYRVIQVACGSRDAQTLALTACGKVFSWG 3275

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G     +IP  VE L  L  T+V CG   + A+              T  G
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLAL--------------TRDG 3321

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG       P  V  L    +  VA G    +A+T+   V+  G  
Sbjct: 3322 EVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDN 3381

Query: 497  AYGQLG 502
             +GQ G
Sbjct: 3382 DHGQQG 3387



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 33/265 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G +RV Y          PK + +   L+V  IACG  H+  +T
Sbjct: 4057 GEVYSWGEG-EDGKLGHG-NRVSYDR--------PKLITALSGLEVVCIACGGAHSACLT 4106

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
             +G I++WG+   GRLGHG   D   P+L+E LS   V  VAC  G+  T  +T   +++
Sbjct: 4107 ARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVW 4166

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P ++   L G+ +  + CG   +  +   G ++T+G G
Sbjct: 4167 SWGDGDY--GKLGRGGSEGCKLPMRID-CLKGLRVIKVECGSQFSVALCQCGSVYTWGKG 4223

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG +     P  V  ++G     ++ G  H  A               T  G++
Sbjct: 4224 DYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVAC--------------TDTGEV 4269

Query: 439  FTWGDGDKGRLGHGD----KEPRLF 459
            +TWGD D+G+LG G     + PRL 
Sbjct: 4270 YTWGDNDEGQLGDGTTLAAQRPRLL 4294



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            ++ WG    G+LG    A V  P     L+ +N   +  GE    AVT  G +Y  G   
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATG--- 4009

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y +G       +       +  ++  + ++ ++C  G  H   +++ G ++++G+G  G 
Sbjct: 4010 YGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ +  L GL    ++CG  H+A +              T+ G+++TWG
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACL--------------TARGRIYTWG 4115

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L    +  VACG     ++ +T   +V++ G   YG+
Sbjct: 4116 KGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGK 4175

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   ++G  +P R+D  +    V +V CG+    AL     VYTWGKG   +LGHG  +
Sbjct: 4176 LGRGGSEGCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYE 4234

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  ++ K +  +  G
Sbjct: 4235 HVRRPMRVTGMQGKMIVSIATG 4256



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 126/289 (43%), Gaps = 34/289 (11%)

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGA--RHAVLVTKQGEIFSWGEESGGRLGHGR 280
           G  ++   D + P  V    +  +  ++C +  RH +  +  G  +SWG    GRLGHG 
Sbjct: 502 GAVYTLPYDTMTPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGD 561

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
            A    PQ +  L+   V  VA G   +  +T  G LYTWG G    G LGHG+  +C  
Sbjct: 562 TAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGA--QGRLGHGTIENCLT 619

Query: 341 PRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           P+ VS    N++ I    +  G   T   T  G +  FG+G  G            PR +
Sbjct: 620 PQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGT-----------PRAL 668

Query: 398 ETLRGLRTTRVSCGV-WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
             L   R TRV  G  WH A                T  G+++TWG GD  RLGHG+ E 
Sbjct: 669 SALAMFRVTRVYTGEHWHAAL---------------TDGGQVYTWGKGDGYRLGHGNMES 713

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
              P+ V  L    I  ++ G    +AL++ G ++  G+    Q+  PV
Sbjct: 714 TKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNPV 762



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 16/214 (7%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            G AH     + G ++ WG+G   G LG G+           D L+PK VE+  +  V ++
Sbjct: 4098 GGAHSACLTARGRIYTWGKG-RYGRLGHGD---------SEDQLIPKLVEALSSFRVIDV 4147

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+  A  + +T    ++SWG+   G+LG G       P  I+ L G+ V  V CG   
Sbjct: 4148 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQF 4207

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+ + G +YTWG G Y+   LGHGS      P +V+G + G  +  I+ G  H    T
Sbjct: 4208 SVALCQCGSVYTWGKGDYHR--LGHGSYEHVRRPMRVTG-MQGKMIVSIATGSLHCVACT 4264

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
              G ++T+GD   G LG G  ++   PR +  L+
Sbjct: 4265 DTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 25/284 (8%)

Query: 312  TRSGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            +R   +Y WG    + G LG   G+KV    P      L+ + L      L+    VT  
Sbjct: 3948 SRGCAVYGWGHN--HRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLF---AVTPD 4002

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            G ++  G G+ G LG G   S S P  + +++ +  T+V+C       + ++ D      
Sbjct: 4003 GKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSAD------ 4056

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                  G++++WG+G+ G+LGHG++     P+ +  L    +  +ACG   S  LT  G 
Sbjct: 4057 ------GEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGR 4110

Query: 490  VYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGA--YHVAALTSTSKVYTW 545
            +YT G   YG+LG     D L+P  V  E   SF V +VACG+       +T    V++W
Sbjct: 4111 IYTWGKGRYGRLGHGDSEDQLIPKLV--EALSSFRVIDVACGSGDAQTLCITDDDNVWSW 4168

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            G G  G+LG G  +    P  +D LK  +V +V CG  F+  +C
Sbjct: 4169 GDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALC 4212



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 125/289 (43%), Gaps = 46/289 (15%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L  + ++ +AC E     +T  G +YT    T                P  V G L+   
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPYDTMT--------------PHLVPG-LESKT 524

Query: 353 LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           ++ +SC     H    +S G  +++G G  G LGHGD  +   P+ +  L      RV+ 
Sbjct: 525 ITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAA 584

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID-- 468
           G+  +A +              TS G L+TWG G +GRLGHG  E  L P+ V+      
Sbjct: 585 GLACSAVI--------------TSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNI 630

Query: 469 ENICQVACG--HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
           E I  VA G     ++  T  G V   G    G+ G P        R    +A   V  V
Sbjct: 631 ERIIDVALGWGEGSTLCCTWEGAVQVFGE---GEAGTP--------RALSALAMFRVTRV 679

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
             G +  AALT   +VYTWGKG   +LGHG+ ++   P LV+ L+  ++
Sbjct: 680 YTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKI 728



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 8/180 (4%)

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHD 479
            A    ++ PS    C K+F WG  DK +LG G K  ++     +P +       +A G  
Sbjct: 3042 AVSVDNNPPSLPNDCPKVFVWGLNDKDQLG-GVKGSKVKVPVFSPALSALRPVHIAGGSK 3100

Query: 480  LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALT 537
                ++  G ++  G    G+LG+  ++ +   R +  ++   V  VA   G  H  ALT
Sbjct: 3101 TLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALT 3160

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +  KVY+WG+G +G+LGHG++    +P L++ L  ++V  + CG   +A +     L+ W
Sbjct: 3161 ADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTW 3220



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 460  PECVAPLIDENICQVAC--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
            P  +A +    I +VAC  G    +AL+  G VY+ G    G+LG          ++   
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086

Query: 518  IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
            ++   V  +ACG  H A LT+  ++YTWGKG  G+LGHGD +++  P LV+ L   +V  
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVID 4146

Query: 578  VVCGLNFTAIICL 590
            V CG      +C+
Sbjct: 4147 VACGSGDAQTLCI 4159



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 22/157 (14%)

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           I Q+AC   L++ LT  G VYT+             D + P  V G +    + +V+C +
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPY-----------DTMTPHLVPG-LESKTITQVSCHS 532

Query: 531 Y--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              H    +S    ++WG G +G+LGHGD   R++P  +  L   +V RV  GL  +A+I
Sbjct: 533 LGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVI 592

Query: 589 ----CLHKW----VSSVDHSVCSSCHNPFGFRRKRHN 617
                L+ W       + H    +C  P       HN
Sbjct: 593 TSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHN 629



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 17/101 (16%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVG---YSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
            G V+ WG+G          HR+G   Y   R+     P  V       + +IA G+ H V
Sbjct: 4215 GSVYTWGKG--------DYHRLGHGSYEHVRR-----PMRVTGMQGKMIVSIATGSLHCV 4261

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
              T  GE+++WG+   G+LG G       P+L+  L  VN+
Sbjct: 4262 ACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ-VNI 4301


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/407 (34%), Positives = 213/407 (52%), Gaps = 32/407 (7%)

Query: 174 AETFRISLSSV-VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           A TFR ++S + V+S S GS+H     S G    WG G  +G LG G+           +
Sbjct: 4   ATTFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRG-EDGQLGHGD---------AEE 53

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLI 290
              P+A+   M      +  GA ++V +++ + E++SWG    GRLGHG   DV  PQ I
Sbjct: 54  RKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPI 113

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             L+G N+  VACG+ HT AVT +G+L+++G     +G LG G+     +P+ V  +L G
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFG--RNQNGQLGLGTTSDAILPQPVE-SLRG 170

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             ++ I+CG  H+   TSAG +F +G G +G LG G      +P +V  L G++ T V+C
Sbjct: 171 QEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVAC 230

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H+    +A D +          G ++T+G    G+LGHGD   +L P+ V  L D  
Sbjct: 231 GWRHS----IAADET----------GAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSR 276

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACG 529
           I  +A G   + A   SG +Y+ G   +GQLG+    D   P  V G +  S V+ ++CG
Sbjct: 277 IVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCG 335

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
             H  A+T    V++WG+G NGQLGH +  + N+P  +  L    +K
Sbjct: 336 WRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 172/347 (49%), Gaps = 20/347 (5%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           L V +++CG+ H++ +   G   SWG    G+LGHG   +   P+ I  L   +   V  
Sbjct: 14  LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73

Query: 304 GEYHTCAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           G  ++ A+++   ++Y+WG G +  G LGHG     +IP+ +   L G ++  ++CG  H
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDF--GRLGHGDCNDVFIPQPIRA-LAGRNIVKVACGDTH 130

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T  VT  G LF+FG    G LG G      +P+ VE+LRG   T ++CG  H+ A     
Sbjct: 131 TLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLA----- 185

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                    +TS G +F WG G  G LG G  E R  P  V  L    +  VACG   S+
Sbjct: 186 ---------ATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSI 236

Query: 483 ALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           A   +G VYT G + YGQLG     D LVP  V+  + +S +  +A G  H +A   + K
Sbjct: 237 AADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIVLIAGGWRHTSAADDSGK 295

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +Y+WG    GQLG G   + N+P  V  L    VK + CG   T  +
Sbjct: 296 LYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAV 342



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 144/301 (47%), Gaps = 30/301 (9%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           +S + V  V+CG  H+ A+  +G   +WG G    G LGHG       PR +       H
Sbjct: 11  VSDLRVTSVSCGSSHSLALLSNGIALSWGRG--EDGQLGHGDAEERKKPRAI------FH 62

Query: 353 LSYISCGL------WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
           L   SC        +  A+      ++++G G FG LGHGD     IP+ +  L G    
Sbjct: 63  LMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIV 122

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +V+CG  HT AV              T  G+LF++G    G+LG G     + P+ V  L
Sbjct: 123 KVACGDTHTLAV--------------TDTGELFSFGRNQNGQLGLGTTSDAILPQPVESL 168

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEE 525
             + +  +ACG + S+A T++G V+  G   YG LGV P  D  +P++V G +    V  
Sbjct: 169 RGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTS 227

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           VACG  H  A   T  VYT+G    GQLGHGD  ++  P  V+ LKD ++  +  G   T
Sbjct: 228 VACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHT 287

Query: 586 A 586
           +
Sbjct: 288 S 288



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           D  +  V+CG   S+AL ++G   + G    GQLG   A+     R    + ++    V 
Sbjct: 13  DLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVC 72

Query: 528 CGA-YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            GA Y VA     ++VY+WG G  G+LGHGD ++   P  +  L  + + +V CG   T 
Sbjct: 73  SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTL 132

Query: 587 II 588
            +
Sbjct: 133 AV 134



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%)

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
           +++  V  V+CG+ H  AL S     +WG+G +GQLGHGD + R  P  +  L       
Sbjct: 11  VSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSA 70

Query: 578 VVCGLNFTAII 588
           V  G  ++  +
Sbjct: 71  VCSGAEYSVAL 81



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           D  G ++ WG    N F   G+  +G      TD+  P  V+      V  ++CG RH  
Sbjct: 291 DDSGKLYSWGW---NKF---GQLGIG----SNTDSNAPVPVQGLNTSPVKLLSCGWRHTF 340

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
            VT+ G++FSWG    G+LGH    D + P  +  LS  +++L
Sbjct: 341 AVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKL 383


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 80

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 81  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 137

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 188

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 189 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 243

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 244 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWG 302

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 303 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 344



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 64  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 123

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 124 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 180

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 181 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 240

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 241 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 286

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 345

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 346 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 378



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 89  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 198

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 199 WGRY--GNLGLGDRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 255

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL--------------TSDGKLYGW 301

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 302 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 361

Query: 502 GV 503
           G+
Sbjct: 362 GI 363



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 331 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 70

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 71  VAYSQSGXEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 127

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAV--------- 178

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E    VACG   +++++ S
Sbjct: 179 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYS 233

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ GA H  ALTS  K+Y WG
Sbjct: 234 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALTSDGKLYGWG 292

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 293 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 334



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 177/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 54  ALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 113

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 114 KQIACGDSHCLAVTXEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKXVAA 170

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 171 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV 230

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 231 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGA 276

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             + ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 277 RHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 335

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 336 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 368



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 153/302 (50%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 79  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ ++ VA G  HT AVT  GDLY WG
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWG 188

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G   S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 189 WGRY--GNLGLGDRTDRLVPERVT-STGGEKXSXVACGWRHTISVSYSGALYTYGWSKYG 245

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXAL--------------TSDGKLYGW 291

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 292 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 351

Query: 502 GV 503
           G+
Sbjct: 352 GI 353



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 182 SSVVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +S +S  S G+ H     S G ++ WG    N F   G+  VG +     D   P  V  
Sbjct: 266 NSFISQISGGARHTXALTSDGKLYGWG---WNKF---GQVGVGNNL----DQCSPVQVRF 315

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
                V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 316 PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 369


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 208/403 (51%), Gaps = 31/403 (7%)

Query: 191  GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
            G  + D DS   VF+WG     G LGG          + +    P  +++  AL   +IA
Sbjct: 2861 GIDNTDIDS--RVFVWGLN-DKGQLGG---------CKGSKVKSPTEMKNIAALRPVSIA 2908

Query: 251  CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHT 308
             G++   +VT  G+++  GE + GRLG G   ++S P  ++ L+   V+ V    G  H+
Sbjct: 2909 GGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHS 2968

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              +TR G +++WG+G    G LGHG   S   P  +   L+   +  I+CG  H+A VT+
Sbjct: 2969 LCITREGKVFSWGEGI--DGKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSSHSAAVTA 3025

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             G L+T+G G +G LGHGD  +  IP++V+ L+  +   ++CG    A  +  TD++   
Sbjct: 3026 DGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGS-RDAQTLALTDNNC-- 3082

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                     +++WGDGD G+LG G  E    P+ +  L   ++C++ACG   S+AL+T+G
Sbjct: 3083 ---------VWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTG 3133

Query: 489  HVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
             V+T G   Y +LG    +    P  ++G + +  + E+A GA H  A+T T +VY+WG 
Sbjct: 3134 KVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGD 3193

Query: 548  GANGQLGHGDKDNRNSPTL-VDFLKDKQVKRVVCGLNFTAIIC 589
              +GQ G+G+      P + +  L   ++  + CG + +   C
Sbjct: 3194 NDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIAWC 3236



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 190/380 (50%), Gaps = 18/380 (4%)

Query: 204  FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
             +WG      ++ G  HR      + T    P   +   AL    +A G +   ++T +G
Sbjct: 3764 LLWGSN-HKFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEG 3822

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWG 321
            ++++ G    GRLG GR  ++  P +IE L  + +E ++   G  H   +T + ++++WG
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWG 3882

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            DG    G LGHG K+S   PRK+   L G  + +ISCG  H+A +TS G L+T+G G +G
Sbjct: 3883 DG--EDGKLGHGDKLSSETPRKIEALL-GKQIVHISCGSSHSAAITSKGELYTWGKGRYG 3939

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHGD      P+ +E L+  +   V+CG      + +  D              +++W
Sbjct: 3940 RLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC------------VWSW 3987

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            GDGD G+LG G  +    P  +  LI   +C+V CG   SVALT +G +YT G   Y +L
Sbjct: 3988 GDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRL 4047

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G    D +   R    +    +  VA G+ H  A T   +V+TWG    GQLG+G  +  
Sbjct: 4048 GHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPI 4107

Query: 562  NSPTLVDFLKDKQVKRVVCG 581
              PTLV  L++ ++ RV CG
Sbjct: 4108 PEPTLVTVLENVKLNRVGCG 4127



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 26/331 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +F WG    G+LG  + + V  P  ++ ++ +    +A G      VT  G +Y  G+G 
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGA 2930

Query: 325  YNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
              +G LG G+  +  IP ++ + N+  +    +  G  H+  +T  G +F++G+G  G L
Sbjct: 2931 --NGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            GHGD  S   P  +E L       ++CG  H+AAV              T+ G+L+TWG 
Sbjct: 2989 GHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAV--------------TADGELYTWGL 3034

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQL 501
            GD GRLGHGD +    P+ V  L D  +  +ACG     ++ALT +  V++ G   +G+L
Sbjct: 3035 GDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKL 3094

Query: 502  GVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            G   ++G  +P ++D       V  +ACGA    AL++T KV+TWGKG   +LGHG+  +
Sbjct: 3095 GRGGSEGCNIPQKIDALCGRD-VCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSH 3153

Query: 561  RNSPTLVD-FLKDKQVKRVVCGLNFTAIICL 590
              SP L++  LK K++  +  G    A+ CL
Sbjct: 3154 YRSPQLIEGPLKKKRITEIAVG----ALHCL 3180



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 21/312 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +E    L +  ++   G RHA+++T   E+FSWG+   G+LGHG +     P+ IE 
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEA 3905

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  +  ++CG  H+ A+T  G+LYTWG G Y  G LGHG    C  P+ +   L    
Sbjct: 3906 LLGKQIVHISCGSSHSAAITSKGELYTWGKGRY--GRLGHGDGDDCLKPKLLEA-LKSYK 3962

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  ++CG     T  +T    ++++GDG +G LG G       P  +E+L G+   +V C
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVEC 4022

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G L+TWG GD  RLGHG  +    P  VA L  + 
Sbjct: 4023 GSQFSVAL--------------TKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQ 4068

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            I  VA G    VA T +G V+T G    GQLG    + +    +   +    +  V CG+
Sbjct: 4069 IVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGS 4128

Query: 531  YHVAALTSTSKV 542
             H  A ++ + +
Sbjct: 4129 AHSFAWSTEAPI 4140



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 24/324 (7%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGAR--HAVLVTKQGEIFSWGEESGGRLGHGRE 281
           YS +       P  ++S + + +  IA      H + ++  G ++SWG   GGRLGHG  
Sbjct: 491 YSLAYNARCEAPVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG-- 548

Query: 282 ADVS-HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
            D+   P+L++ L    +  +ACG  ++ AVT +G+LYTWG G+Y  G LGHG+     +
Sbjct: 549 -DIRREPELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSY--GRLGHGNSEDRLL 605

Query: 341 PRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE 398
           P  V+G L G H+  ++CG    HT  +   G ++++GDG +G LG G      +P+ VE
Sbjct: 606 PTLVAG-LSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVE 664

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL 458
           TL+            H    +V     S         G ++TWG  D  RLGHG  +   
Sbjct: 665 TLK------------HHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVR 712

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI 518
           +P+ V  LI+ +I  +A G    +ALT +  ++T GS             + PT +   I
Sbjct: 713 YPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISA-I 771

Query: 519 AESFVEEVACGAYHVAALTSTSKV 542
            + F+  VACG       TS  K+
Sbjct: 772 NKEFIAGVACGPAQNFLWTSGGKL 795



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 160/354 (45%), Gaps = 40/354 (11%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           K  E+   L +  I C + + + +T  G ++S              A    P L++ L  
Sbjct: 461 KIYETVAELGIKQIMCSSDNIIALTNNGRVYSLA----------YNARCEAPVLLDSLID 510

Query: 296 VNVELVAC---GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK--VSGNLDG 350
           + ++ +A    GE H  A++  G +Y+WG G  + G LGHG      I R+  +   L  
Sbjct: 511 IKIKKIAANVEGE-HYLALSSDGCVYSWGSG--DGGRLGHGD-----IRREPELVKELVN 562

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             ++ I+CG  ++A VTS G L+T+G GS+G LGHG+     +P  V  L G     V+C
Sbjct: 563 KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVAC 622

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G      + +  D            G +++WGDGD G+LG G  +    P+ V  L   N
Sbjct: 623 GSGDAHTLAIDKD------------GIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHN 670

Query: 471 --ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVA 527
             I  V CG   SVAL   G V+T G +   +LG    D +  P  V+G I    V+ +A
Sbjct: 671 KYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IA 729

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  H  ALT   +++TWG          D  N   PT +  +  + +  V CG
Sbjct: 730 VGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNM-EPTCISAINKEFIAGVACG 782



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 32/309 (10%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           ++++  G  +    S G V+ WG G   G LG G+ R      R+     P+ V+  +  
Sbjct: 516 IAANVEGEHYLALSSDGCVYSWGSG-DGGRLGHGDIR------RE-----PELVKELVNK 563

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +  IACG+ ++  VT  GE+++WG  S GRLGHG   D   P L+  LSG +V  VAC 
Sbjct: 564 KITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACG 623

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLW 361
            G+ HT A+ + G +++WGDG Y  G LG G    C +P+ V        ++  + CG  
Sbjct: 624 SGDAHTLAIDKDGIVWSWGDGDY--GKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQ 681

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +  +   G ++T+G      LGHG       P+ VE L       ++ G  H  A+   
Sbjct: 682 FSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLAL--- 738

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      T   ++FTWG  D  +         + P C++ +  E I  VACG   +
Sbjct: 739 -----------TDNCQIFTWG-SDVQKYALSSDNYNMEPTCISAINKEFIAGVACGPAQN 786

Query: 482 VALTTSGHV 490
              T+ G +
Sbjct: 787 FLWTSGGKL 795



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 8/161 (4%)

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           +S G +++WG GD GRLGHGD   R  PE V  L+++ I Q+ACG   S A+T++G +YT
Sbjct: 529 SSDGCVYSWGSGDGGRLGHGD--IRREPELVKELVNKKITQIACGSTYSAAVTSNGELYT 586

Query: 493 MGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            G  +YG+LG   + D L+PT V G ++ S V +VACG+   H  A+     V++WG G 
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLVAG-LSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGD 645

Query: 550 NGQLGHGDKDNRNSPTLVDFLK--DKQVKRVVCGLNFTAII 588
            G+LG G  D    P +V+ LK  +K +  V+CG  F+  +
Sbjct: 646 YGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVAL 686



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 25/285 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
             Y WG    + G LG   G+KV   +   +   +  +  + ++ G     ++TS G ++ 
Sbjct: 3772 FYVWGHN--HRGQLGGVQGTKVKSPVINDI---IAALRPTAVAGGEQTLFILTSEGKVYA 3826

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G G  G LG G   +   P  +E L+ L+  ++S       A+V+            TS
Sbjct: 3827 SGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVL------------TS 3874

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
              ++F+WGDG+ G+LGHGDK     P  +  L+ + I  ++CG   S A+T+ G +YT G
Sbjct: 3875 NFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWG 3934

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQ 552
               YG+LG    D  +  ++   +    V +VACG+      A+T    V++WG G  G+
Sbjct: 3935 KGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGK 3994

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            LG G  D    P  ++ L    V +V CG  F+  +     L+ W
Sbjct: 3995 LGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTW 4039


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 122

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIPIKMVAA 179

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 240 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 286 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 344

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 345 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 179/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 80  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+    V+ G  HTAAV         
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAV--------- 187

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 188 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWG 301

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 88  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWG 197

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 198 WGRY--GNLGLGDRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL--------------TSDGKLYGW 300

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 301 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360

Query: 502 GV 503
           G+
Sbjct: 361 GI 362



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 195/387 (50%), Gaps = 36/387 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DVF+WG       L   +   G   S+      P   +   +L    IA G++    +T 
Sbjct: 559 DVFMWG-------LNDKDQLGGLKGSKVKS---PTLCDHLSSLQCKFIAGGSKSTFFITN 608

Query: 262 QGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
           +G+++S GE S G+LG G    +V+ P+L+  L+ + V  V+   G  H  A+T  G  +
Sbjct: 609 KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAF 668

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG   +G LGHG+ +SC  P  +   +  I ++ ISCG  H+A +    +L+T+G G
Sbjct: 669 SWGDG--ENGQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIVENKYLYTWGLG 725

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  +   P+ V    G    +VSCG      V +  D             K+
Sbjct: 726 DFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDD------------KV 773

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WGDGD G+LG G  E  L P  V  L    IC++ CG   +VALT +G V+T G   +
Sbjct: 774 WSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDF 833

Query: 499 GQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
            +LG    + V     P  V+G +    V ++A GA H  A+T   +V++WG   +GQLG
Sbjct: 834 YRLGHGTDIHVRQ---PKLVEG-LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G+ D +  P L+  L + ++K V CG
Sbjct: 890 TGETDVKKVPNLITGLHNHRIKYVACG 916



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 168/340 (49%), Gaps = 17/340 (5%)

Query: 244  LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
            L  HN+        + T    +F+ G  + G+LG G    V+ P+L+E +  +N++ ++ 
Sbjct: 1475 LKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISV 1534

Query: 304  --GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
              G  H  A++  G++++WG+G    G LGHG++ +   P+++      I ++ I  G  
Sbjct: 1535 HSGGRHCLALSSDGEVFSWGEG--EDGKLGHGNRQTSSQPKRIEFFCGKI-ITNICAGGS 1591

Query: 362  HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            H+A +   G L+T+G G +G LGHGD      P++VE L+      V+CG      + + 
Sbjct: 1592 HSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCIT 1651

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
             D +            +++WGDGD G+LG G  +    P  +  L  + I +V CG   S
Sbjct: 1652 NDDN------------VWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFS 1699

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            +ALT  G +YT G   Y +LG    + +    +   +    V  ++CG+ H    T   +
Sbjct: 1700 MALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGE 1759

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            VY WG    GQLG G    R +PTL  FL +K++ R+ CG
Sbjct: 1760 VYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCG 1799



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 174/336 (51%), Gaps = 28/336 (8%)

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           KQ ++F WG     +LG  + + V  P L + LS +  + +A G   T  +T  G LY+ 
Sbjct: 556 KQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSC 615

Query: 321 GDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGD 377
           G+ ++  G LG G    +   PR V+G L+ + ++ +S   G  H   +TS G  F++GD
Sbjct: 616 GESSF--GKLGIGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGD 672

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G  G LGHG+ +S S P  +E   G   T +SCG  H+AA+V                  
Sbjct: 673 GENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIV--------------ENKY 718

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGS 495
           L+TWG GD GRLGHGD+E  L P+ V   +  N+ QV+CG     +V +T    V++ G 
Sbjct: 719 LYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGD 778

Query: 496 AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
             +G+LG   ++  L+P  V+ ++    + ++ CGA    ALT T  V+TWGKG   +LG
Sbjct: 779 GDFGKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG 837

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           HG   +   P LV+ L+ K V  +  G    A+ CL
Sbjct: 838 HGTDIHVRQPKLVEGLRGKHVIDIAVG----ALHCL 869



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 165/340 (48%), Gaps = 34/340 (10%)

Query: 210  IANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFS 267
             A G+   G+  +GYS +  +    P+ +ES   +++  I+   G RH + ++  GE+FS
Sbjct: 1497 FATGYGNNGQLGLGYSETVTS----PRLLESIKHINIKKISVHSGGRHCLALSSDGEVFS 1552

Query: 268  WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS 327
            WGE   G+LGHG     S P+ IE   G  +  +  G  H+ A+  +G+LYTWG G Y  
Sbjct: 1553 WGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRY-- 1610

Query: 328  GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGH 385
            G LGHG       P++V   L    +  ++CG     T  +T+  +++++GDG +G LG 
Sbjct: 1611 GRLGHGDSDDQLKPKQVEA-LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGR 1669

Query: 386  GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
            G      +P  +E L G    +V CG   + A+              T  G L+TWG GD
Sbjct: 1670 GGSDGCKVPMIIEDLSGKGIVKVECGSQFSMAL--------------TKYGVLYTWGKGD 1715

Query: 446  KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
              RLGHG +E    P  V  L ++ +  ++CG    V  T  G VY  G    GQLG   
Sbjct: 1716 YYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG--- 1772

Query: 506  ADGLVPTR----VDGEIAESFVEEVACGAYHVAALTSTSK 541
             DG +  R    ++  +    ++ ++CG+ H  A  STSK
Sbjct: 1773 -DGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAW-STSK 1810



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 147/303 (48%), Gaps = 29/303 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           VS  S G+      S G  F WG+G  NG LG G      S S+      P  +E+ +  
Sbjct: 649 VSVHSGGNHVMALTSDGLAFSWGDG-ENGQLGHGNLM---SCSK------PHLIEAFVGK 698

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            V +I+CG+ H+  + +   +++WG    GRLGHG E  +  P+ +    G NV  V+CG
Sbjct: 699 IVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCG 758

Query: 305 --EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             +  T  +T    +++WGDG +  G LG G    C IP +V   L G+ +  I CG   
Sbjct: 759 SRDAQTVCITDDDKVWSWGDGDF--GKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQF 815

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T  +T  G ++T+G G F  LGHG  I    P+ VE LRG     ++ G  H  AV    
Sbjct: 816 TVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAV---- 871

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G++F+WGD D G+LG G+ + +  P  +  L +  I  VACG   S+
Sbjct: 872 ----------TQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSI 921

Query: 483 ALT 485
           A T
Sbjct: 922 AWT 924



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 29/289 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WGEG  +G LG G        +RQT +  PK +E      + NI  G  H+  + 
Sbjct: 1548 GEVFSWGEG-EDGKLGHG--------NRQTSS-QPKRIEFFCGKIITNICAGGSHSAAIG 1597

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              GE+++WG+   GRLGHG   D   P+ +E L    V  VAC  G+  T  +T   +++
Sbjct: 1598 LNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P  +  +L G  +  + CG   +  +T  G L+T+G G
Sbjct: 1658 SWGDGDY--GKLGRGGSDGCKVPMIIE-DLSGKGIVKVECGSQFSMALTKYGVLYTWGKG 1714

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG       P  V  L     T +SCG  H    VV TD            G++
Sbjct: 1715 DYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHC---VVCTDE-----------GEV 1760

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            + WGD D+G+LG G    R  P     L+++ I +++CG   ++A +TS
Sbjct: 1761 YCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWSTS 1809



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 16/245 (6%)

Query: 184 VVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           +V+  S GSAH         ++ WG G   G LG G+         +   L PK V   +
Sbjct: 699 IVTDISCGSAHSAAIVENKYLYTWGLG-DFGRLGHGD---------EETILQPKFVTHFL 748

Query: 243 ALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
             +V  ++CG+R A  V +T   +++SWG+   G+LG G       P  +E L G+ +  
Sbjct: 749 GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICK 808

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           + CG   T A+T++G ++TWG G +    LGHG+ +    P+ V G L G H+  I+ G 
Sbjct: 809 ILCGAQFTVALTKTGTVWTWGKGDFYR--LGHGTDIHVRQPKLVEG-LRGKHVIDIAVGA 865

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H   VT  G +F++GD   G LG G+     +P  +  L   R   V+CG  H+ A   
Sbjct: 866 LHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTE 925

Query: 421 ATDSS 425
            T S+
Sbjct: 926 ITTSA 930



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 27/271 (9%)

Query: 331  GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL-FTFGDGSFGALGHGDHI 389
            GH S   C    K+  NL   H   I C    T  +T+ G L F  G G+ G LG G   
Sbjct: 1460 GHFSAEMC---VKLIDNLLKEHNVKIDCD---TVCITTDGALVFATGYGNNGQLGLGYSE 1513

Query: 390  STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
            + + PR +E+++ +   ++S        + +++D            G++F+WG+G+ G+L
Sbjct: 1514 TVTSPRLLESIKHINIKKISVHSGGRHCLALSSD------------GEVFSWGEGEDGKL 1561

Query: 450  GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG- 508
            GHG+++    P+ +     + I  +  G   S A+  +G +YT G   YG+LG   +D  
Sbjct: 1562 GHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQ 1621

Query: 509  LVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
            L P +V+  +   FV +VACG+       +T+   V++WG G  G+LG G  D    P +
Sbjct: 1622 LKPKQVEA-LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMI 1680

Query: 567  VDFLKDKQVKRVVCGLNFTAII----CLHKW 593
            ++ L  K + +V CG  F+  +     L+ W
Sbjct: 1681 IEDLSGKGIVKVECGSQFSMALTKYGVLYTW 1711



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 7/162 (4%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ-VACGHDLSVALTTSGHVYTMGSA 496
           +F WG  DK +LG G K  ++    +   +    C+ +A G   +  +T  G +Y+ G +
Sbjct: 560 VFMWGLNDKDQLG-GLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGES 618

Query: 497 AYGQLGVPVADGLV--PTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQ 552
           ++G+LG+    G V  P  V G + +  V +V+   G  HV ALTS    ++WG G NGQ
Sbjct: 619 SFGKLGIGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQ 677

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           LGHG+  + + P L++    K V  + CG   +A I  +K++
Sbjct: 678 LGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYL 719


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 69  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 125

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 176

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 177 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 231

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 232 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALTSDGKLYGWG 290

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 291 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 52  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 111

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 112 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 168

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 228

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 229 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGF 274

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 333

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 334 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 77  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 186

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 187 WGRY--GNLGLGDRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMAL--------------TSDGKLYGW 289

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 290 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 349

Query: 502 GV 503
           G+
Sbjct: 350 GI 351



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 319 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 69  VAYSQSGMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 125

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 176

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 177 -----TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 231

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D L+P +++  ++ SF+ +++ G  H  ALTS  K+Y WG
Sbjct: 232 GALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWG 290

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V F  D++V +V CG   T  +
Sbjct: 291 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 243 ALDVHNIA---CGARHAVLVTKQG-EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ G E++SWG    GRLGHG  +D+  P  I+ L G+ +
Sbjct: 52  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRI 111

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ 
Sbjct: 112 KQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAA 168

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HTA VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 228

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G 
Sbjct: 229 --------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 274

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             ++ALT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVT 333

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             + V+ WG+G NGQLG G+  +RN P +++ L
Sbjct: 334 ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 27/302 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G           R+G+  S  +D   P  +++   + +  IACG  H + VT 
Sbjct: 77  EVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +GE+ SWG    G+LG G   D   PQ I+   G+ +++VA G  HT AVT  GDLY WG
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 186

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P +V+ +  G  +S ++CG  HT  V+ +G L+T+G   +G
Sbjct: 187 WGRY--GNLGLGDRTDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     IP ++E L     +++S G  HT A+              TS GKL+ W
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL--------------TSDGKLYGW 289

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQL
Sbjct: 290 GWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 349

Query: 502 GV 503
           G+
Sbjct: 350 GI 351



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 319 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/375 (34%), Positives = 187/375 (49%), Gaps = 28/375 (7%)

Query: 195 EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGAR 254
           E  D    V  WG  + +G LG G          +T   LP+ + S   ++V +IACG +
Sbjct: 3   ETADLKSSVLCWGS-LTHGQLGLG------GLEEET-VTLPREIRSFCNVEVVHIACGLQ 54

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H + V K G + S G    G+LGH  E     P LI+ L   NV   + G  H+  +T +
Sbjct: 55  HTLFVKKDGRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDA 112

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G ++TWG    N    G     S  IPR V G  D   +  ++CG  HT  +T+ G ++T
Sbjct: 113 GQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADH-KVVQVACGSAHTVGLTATGQIYT 171

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G  + G LG  +    + P+ V  + GL   RV+ G  H   + ++             
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTIS------------- 218

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G LF WG    G+LG GD + R  P  V  L ++ IC +ACG D S+ALT  G V+T G
Sbjct: 219 -GALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFG 277

Query: 495 SAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKGANGQ 552
           +  YGQLG   ++  L+P +V  E+  S V ++ACG  H +A + S+ +VY +G G NGQ
Sbjct: 278 AGMYGQLGHNTSNNELLPRKV-FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQ 336

Query: 553 LGHGDKDNRNSPTLV 567
           LG G   NR SP +V
Sbjct: 337 LGTGSTVNRMSPAMV 351



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 158/322 (49%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  + G+LG G   E  V+ P+ I     V V  +ACG  HT  V + G + + G+
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             Y  G LGH  +  C  P  +  +L   ++   S G  H+ V+T AG +FT+G      
Sbjct: 71  NDY--GQLGH--EKPCKRPALID-SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQ 125

Query: 383 LGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           LG G  D  STSIPR V  L   +  +V+CG  HT               G T+ G+++T
Sbjct: 126 LGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTV--------------GLTATGQIYT 171

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG  + G+LG  +K P+  P+ V+ +    I +VA G D ++ LT SG ++  G  ++GQ
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQ 231

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LGV    D   PT V   +    +  +ACG  H  ALT    V+T+G G  GQLGH   +
Sbjct: 232 LGVGDDQDRGAPTLVK-TLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSN 290

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           N   P  V  L    V ++ CG
Sbjct: 291 NELLPRKVFELMGSSVTQIACG 312



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 132/279 (47%), Gaps = 27/279 (9%)

Query: 311 VTRSGDLYT----WGDGTYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTA 364
           +T + DL +    WG  T+    LG   + +  +PR++    N++ +H   I+CGL HT 
Sbjct: 1   MTETADLKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVH---IACGLQHTL 57

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            V   G + + G+  +G LGH        P  +++L      + S G  H+  +      
Sbjct: 58  FVKKDGRVLSCGNNDYGQLGHEK--PCKRPALIDSLGERNVLQASSGTKHSTVL------ 109

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSV 482
                   T  G++FTWG  +  +LG G  D      P  V  L D  + QVACG   +V
Sbjct: 110 --------TDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTV 161

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            LT +G +YT GS  +GQLG+         +    I+   +  VA GA H   LT +  +
Sbjct: 162 GLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGAL 221

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           + WG  + GQLG GD  +R +PTLV  L+++ +  + CG
Sbjct: 222 FAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACG 260



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 15/210 (7%)

Query: 191 GSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           GSAH     + G ++ WG    +G LG          + +T    P+ V     L +  +
Sbjct: 156 GSAHTVGLTATGQIYTWGSN-NHGQLG---------LANKTPQNEPQWVSCISGLPIVRV 205

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A GA H +++T  G +F+WG  S G+LG G + D   P L++ L    +  +ACG+ H+ 
Sbjct: 206 AAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSL 265

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTS 368
           A+TR G ++T+G G Y  G LGH +  +  +PRKV   L G  ++ I+CG  H+ A V S
Sbjct: 266 ALTRDGGVFTFGAGMY--GQLGHNTSNNELLPRKVF-ELMGSSVTQIACGRKHSIAYVPS 322

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVE 398
           +G ++ FG G  G LG G  ++   P  V+
Sbjct: 323 SGRVYVFGLGGNGQLGTGSTVNRMSPAMVK 352



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)

Query: 372 LFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           +  +G  + G LG G  +  + ++PRE+ +   +    ++CG+ HT  + V  D      
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHT--LFVKKD------ 62

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                 G++ + G+ D G+LGH  ++P   P  +  L + N+ Q + G   S  LT +G 
Sbjct: 63  ------GRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQ 114

Query: 490 VYTMGSAAYGQLG---VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           V+T GS    QLG   V  A   +P  V G +A+  V +VACG+ H   LT+T ++YTWG
Sbjct: 115 VFTWGSNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYTWG 173

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              +GQLG  +K  +N P  V  +    + RV  G +   ++ +
Sbjct: 174 SNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTI 217


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 202/404 (50%), Gaps = 64/404 (15%)

Query: 201  GDVFIWGEGIANGFLGGG-EHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G+++ WG    +G LG G E     S  ++ D    K+        +  + CG  H + V
Sbjct: 1141 GELYTWGSN-QSGQLGHGLEVNKTLSLPKRVDFFRGKS-------PIFMVECGGEHTIAV 1192

Query: 260  TKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
                 ++SWG +  G+LGHG +A + S P++IE L+G  ++ +A G  H   + +SG+L+
Sbjct: 1193 DSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELF 1252

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNL--------DGIHLSYISCGLWHTAVVTSAG 370
            ++G G +  G LG GS  S  IP ++  N         DG  ++ I+CG  H+ + +  G
Sbjct: 1253 SFGYGDF--GQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENG 1310

Query: 371  HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
             ++++G G  G LGH    + S PR +ETLRG+  T++SCG +HT A             
Sbjct: 1311 EVYSWGLGKQGQLGHKVFENISKPRLIETLRGV--TKISCGHFHTVA------------- 1355

Query: 431  GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT----- 485
             +T    +++WG G+  +LGH   +    P+ V   I +N+ +V CG + ++ +T     
Sbjct: 1356 -TTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDL 1414

Query: 486  ----------------TSGHVYTMGSAAYGQLGV------PVADGLVPTRVDGEIAESFV 523
                            +S  +Y  GSA +G+LG+      P  D  +PT + G  + + +
Sbjct: 1415 NNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLI 1474

Query: 524  EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
            + ++CG+   A +TS + +Y WG G  GQ+G+G  D+   PT +
Sbjct: 1475 D-ISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 145/306 (47%), Gaps = 38/306 (12%)

Query: 301  VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV--SCWIPRKVSGNLDGIHLSYISC 358
            V+CG  H   +T  G+LYTWG     SG LGHG +V  +  +P++V        +  + C
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSN--QSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  HT  V S   ++++G   FG LGHG   ++ S P+ +E L G +   ++ G  H   
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-------- 469
            +                 G+LF++G GD G+LG G    +  P  +   I+         
Sbjct: 1245 L--------------KKSGELFSFGYGDFGQLGTGSFHSKNIPTRIE--INAIMGGLQHH 1288

Query: 470  ---NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--VE 524
                I Q+ACG   SV  + +G VY+ G    GQLG  V + +   R    + E+   V 
Sbjct: 1289 DGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPR----LIETLRGVT 1344

Query: 525  EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            +++CG +H  A T    VY+WG G + +LGH    + + P +VDF   K V +VVCG N 
Sbjct: 1345 KISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNH 1404

Query: 585  TAIICL 590
            T  I  
Sbjct: 1405 TMTITF 1410



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 154/339 (45%), Gaps = 36/339 (10%)

Query: 198  DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
            DS   V+ WG     G LG G   V  S         PK +E      +  IA G  H +
Sbjct: 1193 DSNYFVYSWGSD-KFGQLGHGTKAVNQS--------RPKVIEELTGQKIQAIAAGFAHNI 1243

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS---------GVNVELVACGEYHT 308
            ++ K GE+FS+G    G+LG G     + P  IEI +         G  +  +ACG  H+
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
               + +G++Y+WG G    G LGH    +   PR +   L G+  + ISCG +HT   T 
Sbjct: 1304 VICSENGEVYSWGLG--KQGQLGHKVFENISKPRLIE-TLRGV--TKISCGHFHTVATTD 1358

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
              +++++G G    LGH      S+P+ V+       ++V CG  HT  +    D ++S+
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSN 1418

Query: 429  PS-------GSTSCGKLFTWGDGDKGRLGHGD--KEP---RLFPECVAPLIDENICQVAC 476
                        S   ++ WG  + G+LG G   K P   +  P  +  +   N+  ++C
Sbjct: 1419 QDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISC 1478

Query: 477  GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRV 514
            G D S  +T++  +Y  G   +GQ+G    D + VPTR+
Sbjct: 1479 GSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 12/156 (7%)

Query: 445  DKGRLGHG---DKEPRLFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
            D+ ++ H    D E + FP  +APL +E    +V+CG D    +T  G +YT GS   GQ
Sbjct: 1096 DETKINHKIRIDPELKRFP--MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQ 1153

Query: 501  L--GVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            L  G+ V   L +P RVD    +S +  V CG  H  A+ S   VY+WG    GQLGHG 
Sbjct: 1154 LGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGT 1213

Query: 558  KD-NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            K  N++ P +++ L  ++++ +  G  F   I L K
Sbjct: 1214 KAVNQSRPKVIEELTGQKIQAIAAG--FAHNIVLKK 1247



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 40/175 (22%)

Query: 200  LGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
            L +V+ WG          GEH ++G+S  +  D  +PK V+  +  +V  + CG  H + 
Sbjct: 1359 LKNVYSWG---------SGEHMKLGHSSDK--DESVPKVVDFFIQKNVSKVVCGQNHTMT 1407

Query: 259  VT---------------------KQGEIFSWGEESGGRLGHGREA-----DVSHPQLIEI 292
            +T                         I++WG    G+LG G +      D   P  I+ 
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG 1467

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            ++ +N+  ++CG   +  +T +  +Y WG G +  G +G+G     W+P ++S N
Sbjct: 1468 VNSLNLIDISCGSDFSAMITSNNAIYVWGCGRF--GQIGNGKNDDVWVPTRISLN 1520


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 180/337 (53%), Gaps = 19/337 (5%)

Query: 248  NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GE 305
            +IA G++   +V++ G++++ GE + GRLG G   +V  P+ + IL+   V+ VA   G 
Sbjct: 2929 HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGG 2988

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H  A+T  G +++WG+G    G LGHG++++   P+ +  +L    +  I+CG  H+A 
Sbjct: 2989 KHAMALTLDGKVFSWGEG--EDGKLGHGNRLTLEKPKLIE-SLRTKRVRDIACGSSHSAA 3045

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            +TS+G L+T+G G +G LGHGD+ +   P+ V TL+G R  +V+CG            S 
Sbjct: 3046 ITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACG------------SR 3093

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
             +     T  G +F+WGDGD G+LG G  E    P  V  L    + Q+ CG   S+ALT
Sbjct: 3094 DAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALT 3153

Query: 486  TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             SG V+T G   Y +LG      +  PT + G   +  +  VA GA H  A+T + +VY 
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIH-VAVGALHCLAVTDSGQVYA 3212

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            WG   +GQ G G+      P LV  L    V RV CG
Sbjct: 3213 WGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/340 (35%), Positives = 170/340 (50%), Gaps = 33/340 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H       RQ   L    V+    + VH+   G +HA+ +T
Sbjct: 2944 GKLYACGEG-TNGRLGLG-HNNNVPTPRQVPILNQYVVKK---VAVHS---GGKHAMALT 2995

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG    +  P+LIE L    V  +ACG  H+ A+T SG+LYTW
Sbjct: 2996 LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTW 3055

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3056 GLGEY--GRLGHGDNCTQLKPKLVT-TLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3112

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     S+P +VE L  +   ++ CG   + A+              T  G++
Sbjct: 3113 DFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLAL--------------TKSGEV 3158

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L  + +  VA G    +A+T SG VY  G   +
Sbjct: 3159 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3218

Query: 499  GQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            GQ G    + +V   P  V G +   FV  VACG+ H  A
Sbjct: 3219 GQQG--SGNTVVNKKPNLVLG-LDGVFVNRVACGSSHSVA 3255



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 172/363 (47%), Gaps = 37/363 (10%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  VES   + +  +A   G +H + ++  GE+FSWGE   G+LGHG       P+LIE 
Sbjct: 4013 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA 4072

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            LSG+ V  +ACG  H+  +T  G + TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4073 LSGIGVIDIACGSAHSACITSQGHVLTWGKGRY--GRLGHGDSEDQLQPKLVEALL-GYR 4129

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
               I+CG     T  +T   +++++GDG +G LG G      IP ++E+L GL   +V C
Sbjct: 4130 AIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4189

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG+ +    P+ VA L  + 
Sbjct: 4190 GSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK 4235

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            I  +A G    VA + SG V+T G    GQLG      +   R+   +    + +V CG+
Sbjct: 4236 IISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGS 4295

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFTA 586
             H  AL++             QL    +   + P   D ++D   +    R+V   +F+ 
Sbjct: 4296 AHTLALSTY------------QLSEAVRPPPSPPLEYDLVRDISPEVLHARLVLLHHFSE 4343

Query: 587  IIC 589
            ++C
Sbjct: 4344 LVC 4346



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 165/322 (51%), Gaps = 33/322 (10%)

Query: 171  SSAAETFRISLSSV----VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
            S +A T   SL  V    V+ +S G       S G+VF WGEG  +G LG G      S+
Sbjct: 4009 SVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNRD---SY 4064

Query: 227  SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
             R      PK +E+   + V +IACG+ H+  +T QG + +WG+   GRLGHG   D   
Sbjct: 4065 DR------PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQ 4118

Query: 287  PQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            P+L+E L G     +AC  G+  T  +T   ++++WGDG Y  G LG G    C IP K+
Sbjct: 4119 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKIPMKI 4176

Query: 345  SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
              +L G+ +  + CG   +  +T +G ++T+G G +  LGHG+      P++V  L+G +
Sbjct: 4177 E-SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK 4235

Query: 405  TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
               ++ G  H  A    +DS           G++FTWGD D+G+LG G       P  V 
Sbjct: 4236 IISIATGSLHCVA---CSDS-----------GEVFTWGDNDEGQLGDGTVTAIQRPRLVQ 4281

Query: 465  PLIDENICQVACGHDLSVALTT 486
             L  ++I +V CG   ++AL+T
Sbjct: 4282 SLQGKHIVKVICGSAHTLALST 4303



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 168/331 (50%), Gaps = 25/331 (7%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++  WG     +LG  + + V  P    +LS +    +A G      V++ G LY  G+G
Sbjct: 2893 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 2952

Query: 324  TYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T     LGH + V    PR+V   N   +    +  G  H   +T  G +F++G+G  G 
Sbjct: 2953 TNGRLGLGHNNNVPT--PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3010

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ ++   P+ +E+LR  R   ++CG  H+AA+              TS G+L+TWG
Sbjct: 3011 LGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAI--------------TSSGELYTWG 3056

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G+ GRLGHGD   +L P+ V  L    + QVACG     ++ LT  G V++ G   +G+
Sbjct: 3057 LGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3116

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   ++G  VP +V+  +    V ++ CGA    ALT + +V+TWGKG   +LGHG   
Sbjct: 3117 LGRGGSEGCSVPHQVE-RLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQ 3175

Query: 560  NRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +   PT +  L+ K+V  V  G    A+ CL
Sbjct: 3176 HVRKPTPIQGLRGKKVIHVAVG----ALHCL 3202



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 144/280 (51%), Gaps = 25/280 (8%)

Query: 227 SRQTDALLPKAVESTMALDVHNIA--CGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           S  ++ + PKA E    + V  IA  C  +H ++++   E++SWG   GGRLGHG     
Sbjct: 549 SNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSK 608

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            HP +I  L    V  + CG  ++ A+T +G+L+TWG GTY  G LGHG+     +P +V
Sbjct: 609 EHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY--GRLGHGNSDDKLVPTQV 666

Query: 345 SGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
              L    +  ++ G    H+  VT  G LF +GDG FG LG+G    + IP +++TL  
Sbjct: 667 QA-LKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL-- 723

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC-GKLFTWGDGDKGRLGHGDKEPRLFPE 461
           +  +R+  G   + A+               SC G L+TWG G  GRLGHG+ E    P+
Sbjct: 724 VNVSRIYSGSQFSVAL---------------SCDGTLYTWGKGHGGRLGHGNSEHSNVPK 768

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            V  L  + I  VA G    +ALT+SG +Y  G   Y Q+
Sbjct: 769 LVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 28/318 (8%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +E    L V  +AC   +  ++T  G++FS          H   ++   P+  E L GV+
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL---------HSNSSENIAPKAFEGLEGVH 567

Query: 298 VELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           V  +A  C   H   ++ + ++++WG G  + G LGHG  VS   P  + G L    +  
Sbjct: 568 VVQIAAHCEGKHVMVLSSANEVWSWGAG--DGGRLGHGDTVSKEHPTMIVG-LHEKQVCG 624

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I CG  ++A +T AG LFT+G G++G LGHG+     +P +V+ L+  +   V+ G    
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDA 684

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            ++ V            T  G LF WGDGD G+LG+G       P  +  L+  N+ ++ 
Sbjct: 685 HSMCV------------TDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLV--NVSRIY 730

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
            G   SVAL+  G +YT G    G+LG   ++     ++   +    + +VA G+ H  A
Sbjct: 731 SGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLA 790

Query: 536 LTSTSKVYTWGKGANGQL 553
           LTS+ ++Y WG+    Q+
Sbjct: 791 LTSSGELYGWGRNDYQQI 808



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 38/324 (11%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE+ S + V  VAC E +   +T  G +++            H +      P+   G L+
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL-----------HSNSSENIAPKAFEG-LE 564

Query: 350 GIHLSYIS--CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           G+H+  I+  C   H  V++SA  ++++G G  G LGHGD +S   P  +  L   +   
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           + CG  ++AA+ +A              G+LFTWG G  GRLGHG+ + +L P  V  L 
Sbjct: 625 IYCGASYSAAITIA--------------GELFTWGRGTYGRLGHGNSDDKLVPTQVQALK 670

Query: 468 DENICQVACGHD--LSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVE 524
              +  VA G     S+ +T +G ++  G   +G+LG    +G  +P ++D  +    V 
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN---VS 727

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG--- 581
            +  G+    AL+    +YTWGKG  G+LGHG+ ++ N P LV  L+ K++  V  G   
Sbjct: 728 RIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAH 787

Query: 582 -LNFTAIICLHKWVSSVDHSVCSS 604
            L  T+   L+ W  +    +C S
Sbjct: 788 CLALTSSGELYGWGRNDYQQICPS 811



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 122/245 (49%), Gaps = 16/245 (6%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GSAH     S G V  WG+G   G LG G+           D L PK VE+ +     +I
Sbjct: 4084 GSAHSACITSQGHVLTWGKG-RYGRLGHGDSE---------DQLQPKLVEALLGYRAIDI 4133

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+  A  + +T    ++SWG+   G+LG G       P  IE L+G+ V  V CG   
Sbjct: 4134 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4193

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+TRSG +YTWG G Y+   LGHG+      P+KV+  L G  +  I+ G  H    +
Sbjct: 4194 SVALTRSGSVYTWGKGDYHR--LGHGNTDHVRRPKKVAA-LQGKKIISIATGSLHCVACS 4250

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             +G +FT+GD   G LG G   +   PR V++L+G    +V CG  HT A+     S + 
Sbjct: 4251 DSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4310

Query: 428  SPSGS 432
             P  S
Sbjct: 4311 RPPPS 4315



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 32/263 (12%)

Query: 340 IPRKVSGNLD---GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           IPR  +  ++    + +  ++C   +  ++T+ G +F+          H +      P+ 
Sbjct: 509 IPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL---------HSNSSENIAPKA 559

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
            E L G+   +++        +V+            +S  ++++WG GD GRLGHGD   
Sbjct: 560 FEGLEGVHVVQIAAHCEGKHVMVL------------SSANEVWSWGAGDGGRLGHGDTVS 607

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVD 515
           +  P  +  L ++ +C + CG   S A+T +G ++T G   YG+LG   +D  LVPT+V 
Sbjct: 608 KEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQ 667

Query: 516 GEIAESFVE-EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ 574
              +   V+  +  G  H   +T    ++ WG G  G+LG+G  +    P  +D L +  
Sbjct: 668 ALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN-- 725

Query: 575 VKRVVCGLNFT-AIIC---LHKW 593
           V R+  G  F+ A+ C   L+ W
Sbjct: 726 VSRIYSGSQFSVALSCDGTLYTW 748



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            ++ WG    + G LG   GS++    P +    L  I    I+ G      VT  G L+ 
Sbjct: 3939 IFGWGHN--HRGQLGGLDGSRIKMPTPCEALSLLRPIQ---IAGGEQTLYAVTPDGKLYA 3993

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G G+ G LG G   S S P  VE+L+            H     VA +S        +S
Sbjct: 3994 TGYGAGGRLGIGGTDSVSAPTLVESLQ------------HVIIKKVAVNSGGKHCLALSS 4041

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G++F+WG+G+ G+LGHG+++    P+ +  L    +  +ACG   S  +T+ GHV T G
Sbjct: 4042 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4101

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    + ++ACG+       +T    V++WG G  G
Sbjct: 4102 KGRYGRLGHGDSEDQLQPKLVEALLGYRAI-DIACGSGDAQTLCITDDDNVWSWGDGDYG 4160

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4161 KLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4197



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            A  +F +G    G LG  D     +P   E L  LR  +++ G     AV          
Sbjct: 3936 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAV---------- 3985

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T  GKL+  G G  GRLG G  +    P  V  L    I +VA   G    +AL++
Sbjct: 3986 ----TPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSS 4041

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G V++ G    G+LG    D     ++   ++   V ++ACG+ H A +TS   V TWG
Sbjct: 4042 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4101

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4102 KGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCI 4145


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 203/405 (50%), Gaps = 37/405 (9%)

Query: 185  VSSSSHGSAHEDF--DSLGDVFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVES 240
            V + S  S+H     DS   VF+WG    +  G L G + +V            P   ES
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSKVKV------------PVYSES 3014

Query: 241  TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              AL   +IA G++   +V+  G++++ GE + GRLG G   +V+ P  +  L+   ++ 
Sbjct: 3015 LTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKK 3074

Query: 301  VAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
            VA   G  H  A+T  G +++WG+G    G LGH +++S   P+ +   L    +  I+C
Sbjct: 3075 VAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHDNRLSLDRPKMIEA-LKSKRIRDIAC 3131

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            G  H+A ++S G LFT+G G +G LGHGD+++   P+ V+ L G    +V+CG      +
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
             ++ +            G +F+WGDGD G+LG G  E    P  +  L    +C + CG 
Sbjct: 3192 ALSAE------------GLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGA 3239

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAAL 536
              S+ALT  G VYT G   Y +LG   +D  V  PT V+  ++E  +  VA GA H    
Sbjct: 3240 QFSLALTKFGQVYTWGKGDYFRLGHG-SDQHVRKPTLVES-LSEKKIVHVAVGALHCLCA 3297

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            T   +VY WG   +GQ G+G       P+LV  L+  +V RV CG
Sbjct: 3298 TDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACG 3342



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 188/383 (49%), Gaps = 27/383 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P + E+  AL    +  G +  + VT
Sbjct: 3968 GTIYGWGHN-HRGQLGGVE---------GPKVKIPTSCEALSALRPVQLVGGEQTLLAVT 4017

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    +  P L+E +  + ++ VA   G  H  A++  G +Y
Sbjct: 4018 SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVY 4077

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G  + G LGHG+K  C  P+ +   L G  +  I+CG  H+A VT+ G ++T+G G
Sbjct: 4078 SWGEG--DDGKLGHGNKNGCDHPQLIDA-LQGKEIVDIACGGAHSAAVTAGGEIYTWGKG 4134

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VETL G +   ++CG      + +  D +            +
Sbjct: 4135 RYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDN------------V 4182

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4183 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDY 4242

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    + +   +    +    +  +A G+ H  A +   +V+TWG    GQLG G  
Sbjct: 4243 HRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTM 4302

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
            +  + P LV  L+ K + RV CG
Sbjct: 4303 NAIHRPRLVVTLQGKNINRVACG 4325



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 22/314 (7%)

Query: 230  TDALL-PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
            TD +L P  +ES   + +  +A   G +H + ++  G+++SWGE   G+LGHG +    H
Sbjct: 4038 TDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDH 4097

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            PQLI+ L G  +  +ACG  H+ AVT  G++YTWG G Y  G LGHG       P+ V  
Sbjct: 4098 PQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY--GRLGHGDSEDQMKPKLVE- 4154

Query: 347  NLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
             L G  +  I+CG     T  +T   +++++GDG +G LG G      IP ++E+L GL 
Sbjct: 4155 TLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG 4214

Query: 405  TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              +V CG   + A+              T  G ++TWG GD  RLGHG  E    P+ +A
Sbjct: 4215 VVKVECGSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIA 4260

Query: 465  PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE 524
             L  + I  +A G    VA +  G V+T G    GQLG    + +   R+   +    + 
Sbjct: 4261 ALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNIN 4320

Query: 525  EVACGAYHVAALTS 538
             VACG+ H  A ++
Sbjct: 4321 RVACGSAHSLAWST 4334



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 167/345 (48%), Gaps = 35/345 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H    +   Q  +L    ++      VH+   G +HA+ +T
Sbjct: 3037 GKLYACGEG-TNGRLGLG-HSNNVATPCQLTSLNQYVIKKVA---VHS---GGKHAMALT 3088

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH     +  P++IE L    +  +ACG  H+ A++ +G+L+TW
Sbjct: 3089 LDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTW 3148

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG  ++   P+ V   L G H+  ++CG     T  +++ G +F++GDG
Sbjct: 3149 GLGEY--GRLGHGDNLTQLRPKLVKALL-GHHIVQVACGSRDAQTLALSAEGLVFSWGDG 3205

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G      IP  +E L GL    + CG   + A+              T  G++
Sbjct: 3206 DFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLAL--------------TKFGQV 3251

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  V  L ++ I  VA G    +  T  G VY  G   +
Sbjct: 3252 YTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDH 3311

Query: 499  GQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTST 539
            GQ G    +G +       +  +     V  VACG+ H  A T++
Sbjct: 3312 GQQG----NGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTS 3352



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 168/332 (50%), Gaps = 27/332 (8%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++F WG     +LG  + + V  P   E L+ +    +A G      V+  G LY  G+G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045

Query: 324  TYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            T     LGH + V+  C +    S N   I    +  G  H   +T  G +F++G+G  G
Sbjct: 3046 TNGRLGLGHSNNVATPCQL---TSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3102

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGH + +S   P+ +E L+  R   ++CG  H+AA+              +S G+LFTW
Sbjct: 3103 KLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI--------------SSTGELFTW 3148

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYG 499
            G G+ GRLGHGD   +L P+ V  L+  +I QVACG     ++AL+  G V++ G   +G
Sbjct: 3149 GLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFG 3208

Query: 500  QLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
            +LG   ++G  +P  ++  +    V  + CGA    ALT   +VYTWGKG   +LGHG  
Sbjct: 3209 KLGRGGSEGCDIPHNIE-RLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSD 3267

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
             +   PTLV+ L +K++  V  G    A+ CL
Sbjct: 3268 QHVRKPTLVESLSEKKIVHVAVG----ALHCL 3295



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 180/352 (51%), Gaps = 29/352 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P++ +S   L V  I C  R  +++T  G+++     S          +   P+ IE   
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSS----------ETQCPEQIEGFD 517

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           G  +  +A      H+ A++  GD+Y+WG+G  + G LGHG   S   P K++  L G +
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWGNG--DGGRLGHGDNNSRDQPTKIT-ELVGKN 574

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + +ISCG  ++A VTS+G ++T+G G++G LGHG     ++P  V  L+      ++CG 
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACG- 633

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                      S  +     T+ G +F+WGDG  G+LG G  +    P+ +  L D  + 
Sbjct: 634 -----------SGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY 531
           +V CG   S+ALT SG VYT G     +LG    + +  P  V+G +    +++VA G+ 
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSG 741

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           HV ALT   +VY WG+  NGQ+G   + N + PTL+  L+ K +  + CG N
Sbjct: 742 HVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPN 793



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 21/283 (7%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGA--RHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           Y     ++   P+ +E     ++  +A  A  +H++ ++  G+++SWG   GGRLGHG  
Sbjct: 499 YIMYYSSETQCPEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDN 558

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                P  I  L G NV  ++CG  ++ AVT SG++YTWG G Y  G LGHG+     +P
Sbjct: 559 NSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNY--GRLGHGTSEDHTVP 616

Query: 342 RKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
             V G L    +  I+CG     T  VT+ G +F++GDG +G LG G    +  P+ +E 
Sbjct: 617 TLVVG-LKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEK 675

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L+ +   RV CG   + A+              T  G ++TWG GD  RLGHG +    F
Sbjct: 676 LQDIEVARVYCGSQFSLAL--------------TKSGSVYTWGKGDNHRLGHGSENHVRF 721

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           P+ V  L  + I +VA G    +ALT  G VY  G    GQ+G
Sbjct: 722 PKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVG 764



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 15/233 (6%)

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
            + H     VA +S        ++ GK+++WG+GD G+LGHG+K     P+ +  L  + I
Sbjct: 4050 IQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEI 4109

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA 530
              +ACG   S A+T  G +YT G   YG+LG     D + P  V+  I    ++ +ACG+
Sbjct: 4110 VDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVID-IACGS 4168

Query: 531  --YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                   +T    V++WG G  G+LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4169 GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL 4228

Query: 589  C----LHKW----VSSVDHSVCSSCHNP---FGFRRKRHNCYNCGLVFCKACS 630
                 ++ W       + H       +P      + K+  C   G + C ACS
Sbjct: 4229 TRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACS 4281



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           ++N R    +   +   +V+  S   +      S G+V+ WG G   G LG G       
Sbjct: 557 DNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRG-NYGRLGHGTSE---- 611

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                D  +P  V       + +IACG+  A  + VT  G +FSWG+   G+LG G    
Sbjct: 612 -----DHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDG 666

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P+LIE L  + V  V CG   + A+T+SG +YTWG G  ++  LGHGS+     P+ 
Sbjct: 667 SKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKG--DNHRLGHGSENHVRFPKL 724

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V G L+G  +  ++ G  H   +T  G ++ +G    G +G     + S P  +  L+G 
Sbjct: 725 VEG-LNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGK 783

Query: 404 RTTRVSCG 411
               + CG
Sbjct: 784 NIVDIDCG 791



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     IP   E L  LR  ++  G     AV          
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAV---------- 4016

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                TS GK++  G G  GRLG G  +  L P  +  +    I +VA   G    +AL+T
Sbjct: 4017 ----TSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALST 4072

Query: 487  SGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
             G VY+ G    G+LG    +G   P  +D    +  V+ +ACG  H AA+T+  ++YTW
Sbjct: 4073 DGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVD-IACGGAHSAAVTAGGEIYTW 4131

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            GKG  G+LGHGD +++  P LV+ L   +V  + CG      +C+
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCI 4176



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 2/173 (1%)

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            V   +++SS S   S S  K+F WG  DK +LG         P     L       +A G
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGG 3026

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAA 535
                  ++  G +Y  G    G+LG+  ++ +        + +  +++VA   G  H  A
Sbjct: 3027 SKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMA 3086

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            LT   KV++WG+G +G+LGH ++ + + P +++ LK K+++ + CG + +A I
Sbjct: 3087 LTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI 3139



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G          HR+G+    +     PK VE      +  +A G+ H + +T
Sbjct: 698 GSVYTWGKG--------DNHRLGHG--SENHVRFPKLVEGLNGKCIKKVAVGSGHVLALT 747

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
             GE++ WG    G++G   E +VS P L+ +L G N+  + CG   + A + S
Sbjct: 748 DDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSS 801


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/421 (32%), Positives = 203/421 (48%), Gaps = 44/421 (10%)

Query: 167 SNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
           + D  +  E    S+  + + +SH  A     S G V  WG G  +G LG G+       
Sbjct: 8   AGDDEAVPEAPERSVVLISAGASHSVA---LLSGGVVCSWGRG-EDGQLGHGDAE----- 58

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVT-KQGEIFSWGEESGGRLGHGREADVS 285
            R    +L  A +         + CGA H    + ++ +++SWG    GRLGHG  +DV 
Sbjct: 59  DRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVF 118

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           +PQ I+ L GV +  +ACG+ H  AVT +G +++WG     +G LG G+     +P+K+ 
Sbjct: 119 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWG--RNQNGQLGLGNTEDSLLPQKIQ 176

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
              +G+ +  I+ G  HTA VT  G L+ +G G +G LG GD     IP +V ++ G + 
Sbjct: 177 A-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKM 235

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+CG  HT  V              +S G ++T+G    G+LGHGD E  L P  +  
Sbjct: 236 VLVACGWRHTITV--------------SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA 281

Query: 466 LIDENICQ---------------VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGL 509
           L D  I Q                  G  +  AL   G +Y  G   +GQ+GV    D  
Sbjct: 282 LKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHC 341

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
            P +V+    E  V +VACG  H  ALT    V++WG+G +GQLGHG+  +RN P ++D 
Sbjct: 342 SPVQVNFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDA 400

Query: 570 L 570
           L
Sbjct: 401 L 401



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 188/375 (50%), Gaps = 41/375 (10%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P+A E ++ L    I+ GA H+V +   G + SWG    G+LGHG   D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 291 ----EILSGVNVELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
               +   G    +V CG  HT A +     LY+WG G +  G LGHG+    + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDF--GRLGHGNSSDVFNPQPIQ 124

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L G+ ++ I+CG  H   VT AGH+ ++G    G LG G+   + +P++++   G+R 
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             ++ G  HTAAV              T  G L+ WG G  G LG GD++ RL PE V+ 
Sbjct: 184 KMIAAGAEHTAAV--------------TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSS 229

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDG-------- 516
           +  + +  VACG   ++ +++SG +YT G + YGQLG     D LVP +++         
Sbjct: 230 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQ 289

Query: 517 ----EIAESFV--EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
               E+   F+  E    G     AL +  K+Y WG    GQ+G GD ++  SP  V+F 
Sbjct: 290 EEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP 349

Query: 571 KDKQVKRVVCGLNFT 585
            +++V +V CG   T
Sbjct: 350 NEQKVVQVACGWRHT 364



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 178/379 (46%), Gaps = 61/379 (16%)

Query: 156 PSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFL 215
           P+ LT AF D     +S           V+  + H +A+ D +    ++ WG G      
Sbjct: 63  PTVLTAAFDDAPGGVASV----------VICGADHTTAYSDEEL--QLYSWGWGDFG--- 107

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
                R+G+  S  +D   P+ +++   + +  IACG  H + VT  G + SWG    G+
Sbjct: 108 -----RLGHGNS--SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
           LG G   D   PQ I+   GV V+++A G  HT AVT  GDLY WG G Y  G LG G +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDR 218

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
               IP KVS +++G  +  ++CG  HT  V+S+G ++T+G   +G LGHGD     +P 
Sbjct: 219 DDRLIPEKVS-SVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH 277

Query: 396 EVETLR-----------------GLRTTRVSCGV-WHTAAVVVATDSSSSSPSGSTSCGK 437
           ++E L+                 G    RV  G+ W  AA                  GK
Sbjct: 278 KLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA-----------------DGK 320

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           L+ WG    G++G GD E    P  V    ++ + QVACG   ++ALT + +V++ G   
Sbjct: 321 LYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 380

Query: 498 YGQLG-VPVADGLVPTRVD 515
            GQLG   + D  +P  +D
Sbjct: 381 SGQLGHGEIVDRNIPKMID 399



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  +ACG RH + +T+   +FSWG  + G+LGHG   D + P++I+ LS
Sbjct: 354 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 402


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 194/379 (51%), Gaps = 30/379 (7%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V++ S GS+H     S G V  WG G  +G LG G+           + L PKA+ +   
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRG-EDGQLGHGQ---------ADECLAPKAISTLTD 64

Query: 244 LDVHNIACGARHAVLVT-KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             + ++ CGA + + V   +G+++SWG    GRLGHG   DV  P+ IE  SG  V  VA
Sbjct: 65  AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVA 124

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           CG+ HT  V   G+L+T+G     +G LG G    C  P+ V   L G  +  ++CG  H
Sbjct: 125 CGDTHTLVVAGEGELFTFG--RNQNGQLGLGHTNDCLSPQLVV-ALQGERVRSVACGSEH 181

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +   T +G +F++G G +G LG G+     +P  V  L G+R     CG  H+A  VV+ 
Sbjct: 182 SLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSA--VVSE 239

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
           D            G++FT+G    G+LGHGD   R  P  VA L    I  VA G   ++
Sbjct: 240 D------------GRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTM 287

Query: 483 ALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           A  +SG++Y  G   +GQLG+   +D   P  V G +A   V  V CG  H  A+T   +
Sbjct: 288 AADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR 347

Query: 542 VYTWGKGANGQLGHGDKDN 560
           VY+WG+G NGQLGHG + +
Sbjct: 348 VYSWGRGVNGQLGHGAEQD 366



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 166/346 (47%), Gaps = 21/346 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  ++CG+ H+V +   G + SWG    G+LGHG+  +   P+ I  L+   +E V CG 
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 306 YHTCAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +T AV  S G +Y+WG G +  G LGHG     ++PR +     G  +  ++CG  HT 
Sbjct: 75  EYTIAVAPSRGQVYSWGWGDF--GRLGHGDCNDVFVPRPIE-FFSGRPVHRVACGDTHTL 131

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           VV   G LFTFG    G LG G       P+ V  L+G R   V+CG  H+ A       
Sbjct: 132 VVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLA------- 184

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                  +T  G +F+WG G  G LG G+ + R  P  V  L    +    CG   S  +
Sbjct: 185 -------ATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVV 237

Query: 485 TTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           +  G V+T G + YGQLG     D  VP +V   +  + +  VA G  H  A  S+  +Y
Sbjct: 238 SEDGRVFTFGWSKYGQLGHGDHTDRTVPCQV-AALRHTRISSVAGGWRHTMAADSSGNLY 296

Query: 544 TWGKGANGQLGHGDKDNRNSPTLV-DFLKDKQVKRVVCGLNFTAII 588
            WG    GQLG GD  +R SP LV   L  ++V  V CG   T  +
Sbjct: 297 GWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAV 342



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 1/122 (0%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           +  +  V+CG   SVA+ + G V + G    GQLG   AD  +  +    + ++ +E V 
Sbjct: 12  EPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVV 71

Query: 528 CGA-YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           CGA Y +A   S  +VY+WG G  G+LGHGD ++   P  ++F   + V RV CG   T 
Sbjct: 72  CGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTL 131

Query: 587 II 588
           ++
Sbjct: 132 VV 133



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 12/104 (11%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +SSV     H  A    DS G+++ WG    N F   G+  +G S  R +  L+  A+  
Sbjct: 276 ISSVAGGWRHTMA---ADSSGNLYGWG---WNKF---GQLGLGDSSDRPSPVLVGGALAG 326

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
                V  + CG RH V VT+ G ++SWG    G+LGHG E D+
Sbjct: 327 QR---VSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 193/365 (52%), Gaps = 31/365 (8%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG-E 264
           WG G  +G LG G+           D L P  + +    D+  + CGA H +  ++ G +
Sbjct: 38  WGRG-EDGQLGHGD---------TDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRD 87

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  P  I+ L G+ ++ +ACG+ H  AVT    + +WG   
Sbjct: 88  VYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWG--R 145

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    + I +  ++ G  H+  +T  G+L+ +G G +G LG
Sbjct: 146 NQNGELGLGTAEDSLLPQKIQ-IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLG 204

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P +V T+ G +   V+CG  HT  V              +S G L+T G G
Sbjct: 205 LGDRNDRLLPEKV-TVDGDKMAMVACGWRHTICV--------------SSSGGLYTNGWG 249

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+LGHGD E  L P  V  L D+ I QV+ G   S+ALT+SG +   G   +GQ+GV 
Sbjct: 250 KYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVG 309

Query: 505 VA-DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V+    +  V+ ++CG  H  A+T    VY+WG+GANGQLG+G+  +RN 
Sbjct: 310 NNFDCCSPMQVNFP-HDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNV 368

Query: 564 PTLVD 568
           PT+++
Sbjct: 369 PTIIE 373



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 172/342 (50%), Gaps = 21/342 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + SWG    G+LGHG   D   P  +  L G ++  V CG  HT
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHT 78

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + SG D+Y+WG G +  G LGHG      IP  +   L G+ +  I+CG  H   VT
Sbjct: 79  MARSESGRDVYSWGWGDF--GRLGHGDHSDLLIPHPIKA-LQGLMIQQIACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
               + ++G    G LG G    + +P++++    +    V+ G  H+ A+         
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAI--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V  +  + +  VACG   ++ +++S
Sbjct: 187 -----TKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT-VDGDKMAMVACGWRHTICVSSS 240

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G   YGQLG     D LVP +V   +++ F+ +V+ G  H  ALTS+ ++  WG
Sbjct: 241 GGLYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFISQVSGGWRHSMALTSSGQLLGWG 299

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  +  SP  V+F  D++V+ + CG   T  +
Sbjct: 300 WNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAV 341



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 163/315 (51%), Gaps = 29/315 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV+ WG G   G LG G+H         +D L+P  +++   L +  IACG  H + VT 
Sbjct: 87  DVYSWGWG-DFGRLGHGDH---------SDLLIPHPIKALQGLMIQQIACGDSHCLAVTM 136

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
             ++ SWG    G LG G   D   PQ I+I   + +++VA G  H+ A+T+ G+LY WG
Sbjct: 137 DSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWG 196

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G +    +P KV+  +DG  ++ ++CG  HT  V+S+G L+T G G +G
Sbjct: 197 WGRY--GNLGLGDRNDRLLPEKVT--VDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYG 252

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD     +PR+V+ L     ++VS G  H+ A+              TS G+L  W
Sbjct: 253 QLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMAL--------------TSSGQLLGW 298

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G++G G+      P  V    D+ +  ++CG   ++A+T   +VY+ G  A GQL
Sbjct: 299 GWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQL 358

Query: 502 G-VPVADGLVPTRVD 515
           G     D  VPT ++
Sbjct: 359 GNGETIDRNVPTIIE 373



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R   VS G  H+ A++          SG+  C    +WG G+ G+LGHGD + RLFP  +
Sbjct: 15  RVLLVSAGASHSVALL----------SGNVVC----SWGRGEDGQLGHGDTDDRLFPTKL 60

Query: 464 APLIDENICQVACGHDLSVALTTSGH-VYTMGSAAYGQLG-VPVADGLVPTRVDGEIAES 521
           + L  ++I  V CG D ++A + SG  VY+ G   +G+LG    +D L+P  +   +   
Sbjct: 61  SALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKA-LQGL 119

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            ++++ACG  H  A+T  S+V +WG+  NG+LG G  ++   P  +   ++  +K V  G
Sbjct: 120 MIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAG 179

Query: 582 LNFTAII 588
              +  I
Sbjct: 180 AEHSVAI 186



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 214 FLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
            LG G ++ G        D   P  V       V  I+CG RH + VT++  ++SWG  +
Sbjct: 295 LLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGA 354

Query: 273 GGRLGHGREADVSHPQLIEILS 294
            G+LG+G   D + P +IE  S
Sbjct: 355 NGQLGNGETIDRNVPTIIEAFS 376


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 199/388 (51%), Gaps = 37/388 (9%)

Query: 189 SHGSAHEDFDSLGDVFI-WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G++H      GD+   WG G  +G LG G+           D L P  +    ALD H
Sbjct: 21  SAGASHSVALLSGDIVCSWGRG-EDGQLGHGD---------AEDRLSPTQLS---ALDDH 67

Query: 248 NIA---CGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
            I    CGA H V  ++ + E++SWG    GRLGHG  +D+  P  I+ L G+ ++ +AC
Sbjct: 68  QIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC 127

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+ H  AVT  G++ +WG     +G LG G      +P+K+    +GI +  ++ G  HT
Sbjct: 128 GDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHT 184

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A VT  G L+ +G G +G LG GD     +P  V +  G + + V+CG  HT +V     
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV----- 239

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    +  G L+T+G    G+LGHGD E  L P  +  L +  I Q++ G   ++A
Sbjct: 240 ---------SYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMA 290

Query: 484 LTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           LT+ G +Y  G   +GQ+GV    D   P +V     +  V+ V+CG  H  A+T  + V
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQ-VSCGWRHTLAVTERNNV 349

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           + WG+G NGQLG G+  +RN P +++ L
Sbjct: 350 FAWGRGTNGQLGIGESLDRNFPKIIEAL 377



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 174/342 (50%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L    +  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHT 79

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  ++Y+WG G +  G LGHG+    + P  +   L GI +  I+CG  H   VT
Sbjct: 80  VAYSESRMEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 187

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V     E +  VACG   +++++ S
Sbjct: 188 -----TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYS 242

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG   + D LVP +++  +  S + +++ G  H  ALTS  K+Y WG
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLVPHKLEA-LGNSVISQISGGWRHTMALTSDGKLYGWG 301

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G G+  ++ SP  V    D++V +V CG   T  +
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAV 343



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 29/323 (8%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + SV   + H  A+ +  S  +V+ WG G           R+G+  S  +D   P  +++
Sbjct: 69  IVSVTCGADHTVAYSE--SRMEVYSWGWGDFG--------RLGHGNS--SDLFTPLPIKA 116

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  IACG  H + VT +GE+ SWG    G+LG G   D   PQ I+   G+ +++
Sbjct: 117 LHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKM 176

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  HT AVT  GDLY WG G Y  G LG G +    +P +V+ +  G  +S ++CG 
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRLVPERVT-SAGGEKMSMVACGW 233

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+ +G L+T+G   +G LGHGD     +P ++E L     +++S G  HT A+  
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMAL-- 291

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G G+   +  P  V    D+ + QV+CG   
Sbjct: 292 ------------TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRH 339

Query: 481 SVALTTSGHVYTMGSAAYGQLGV 503
           ++A+T   +V+  G    GQLG+
Sbjct: 340 TLAVTERNNVFAWGRGTNGQLGI 362



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 19/195 (9%)

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R   +S G  H+ A++          SG   C    +WG G+ G+LGHGD E RL P  +
Sbjct: 16  RVLIISAGASHSVALL----------SGDIVC----SWGRGEDGQLGHGDAEDRLSPTQL 61

Query: 464 APLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
           + L D  I  V CG D +VA + S   VY+ G   +G+LG   +  L        +    
Sbjct: 62  SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR 121

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           ++++ACG  H  A+T   +V +WG+  NGQLG GD ++   P  +   +  ++K V  G 
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA 181

Query: 583 NFTAIIC----LHKW 593
             TA +     L+ W
Sbjct: 182 EHTAAVTEDGDLYGW 196



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +SV+S  S G  H     S G ++ WG    N F   G+  VG +     D   P  V  
Sbjct: 275 NSVISQISGGWRHTMALTSDGKLYGWG---WNKF---GQVGVGNNL----DQCSPVQVRI 324

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
                V  ++CG RH + VT++  +F+WG  + G+LG G   D + P++IE LS
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALS 378


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 184/380 (48%), Gaps = 69/380 (18%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG G  +G LG G+           D   P  V++  +  V  +ACG+ H V+++
Sbjct: 7   GLVYSWGRG-EDGQLGLGD---------TNDQDRPVLVDALKSKGVVQVACGSGHTVVLS 56

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +++WG    GRLGHG       P+++E L G  +    CG YHT AVT  G+LYTW
Sbjct: 57  EDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTW 116

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           G G Y  G LGHG++     P  V    D G  ++ I+CG  HT V+T  G ++T+GD  
Sbjct: 117 GGGMY--GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174

Query: 380 FGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G +GH +      +PR +E+L+    T+V+   +HTAA+              T+ G++
Sbjct: 175 NGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAAL--------------TAAGEI 220

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           FTWG+G  GRLGHG +  ++ P  V  L+ + +  VACG   S A+  SG +YT G   +
Sbjct: 221 FTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEH 280

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GQ                                         VYT+G G +G+LGHGD 
Sbjct: 281 GQ-----------------------------------------VYTFGNGDHGKLGHGDV 299

Query: 559 DNRNSPTLVDFLKDKQVKRV 578
              + PTLV  L    V +V
Sbjct: 300 RKVSVPTLVAGLVKMHVVKV 319



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 26/288 (9%)

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           +G +Y+WG G    G LG G       P  V   L    +  ++CG  HT V++  G ++
Sbjct: 6   AGLVYSWGRG--EDGQLGLGDTNDQDRPVLVDA-LKSKGVVQVACGSGHTVVLSEDGAVY 62

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T+G G  G LGHGD+    +PR VE L G R  + +CG +HTAAV              T
Sbjct: 63  TWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAV--------------T 108

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN--ICQVACGHDLSVALTTSGHVY 491
             G+L+TWG G  G+LGHG++     P  V  L DE   + Q+ACG   +V LT  G VY
Sbjct: 109 DKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168

Query: 492 TMGSAAYGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           T G    G +G   ADG   +P  ++   A++  +  ACG +H AALT+  +++TWG+G 
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALTAAGEIFTWGEGK 227

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            G+LGHG + N+  P +V+ L  K+V  V CG   +A I     L+ W
Sbjct: 228 FGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTW 275



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 132/247 (53%), Gaps = 25/247 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G+  G LG G        S      + K +    A  V  IACG+RH V++T
Sbjct: 111 GELYTWGGGM-YGKLGHGNE------SGHPTPCMVKHLRDEGA-RVTQIACGSRHTVVLT 162

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             G++++WG++  G +GH   AD     P+++E L    V  VA   +HT A+T +G+++
Sbjct: 163 DLGKVYTWGDKENGVVGH-TNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIF 221

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT---- 374
           TWG+G +  G LGHG + +  +PR V   L G  + +++CG +H+A +  +G L+T    
Sbjct: 222 TWGEGKF--GRLGHGMERNQMVPRMVEA-LMGKRVGHVACGGFHSAAILDSGELYTWGGG 278

Query: 375 -------FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
                  FG+G  G LGHGD    S+P  V  L  +   +V+    HTAA+  A+ S+ +
Sbjct: 279 EHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPA 338

Query: 428 SPSGSTS 434
             S S+S
Sbjct: 339 LSSMSSS 345



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 19/179 (10%)

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
           LG V+ WG+   NG +G          +      LP+ +ES  A  V  +A    H   +
Sbjct: 164 LGKVYTWGDK-ENGVVG--------HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAAL 214

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T  GEIF+WGE   GRLGHG E +   P+++E L G  V  VACG +H+ A+  SG+LYT
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYT 274

Query: 320 WGDGTY---------NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           WG G +         + G LGHG      +P  V+G L  +H+  ++    HTA +  A
Sbjct: 275 WGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAG-LVKMHVVKVASYNEHTAALAGA 332


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 190/370 (51%), Gaps = 30/370 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK- 261
           V  WG G  +G LG G+ +         D L P  + +   L++ ++ CGA H +  ++ 
Sbjct: 35  VCTWGRG-EDGQLGHGDAQ---------DRLSPTILSTLEGLEIISVICGADHTIAYSES 84

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
             +++SWG    GRLGHG  +D+  PQ I  L G+ ++ +ACG+ H  AVT  G + +WG
Sbjct: 85  HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWG 144

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                +G LG G+     +P+K+     G+ +  ++ G  HTA VT  G L+ +G G +G
Sbjct: 145 --RNQNGQLGLGTTEDSLVPQKIQA-FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYG 201

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LG GD     +P +V    G +   V+CG  HT +V              +S G L+T+
Sbjct: 202 NLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV--------------SSSGGLYTY 247

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G+LGHGD    L P  +  L    I Q++ G   ++A+T+ G +Y  G   +GQ+
Sbjct: 248 GWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV 307

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           GV    D   P +V   + +  +  ++CG  H  A+T    V++WG+G NGQLG+G+  +
Sbjct: 308 GVGDNVDRSSPVQVKLPLEQKVIL-ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTD 366

Query: 561 RNSPTLVDFL 570
           RN P ++  L
Sbjct: 367 RNVPVIIKAL 376



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 182/342 (53%), Gaps = 20/342 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + +WG    G+LGHG   D   P ++  L G+ +  V CG  HT
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S  D+Y+WG G +  G LGHG+    + P+ +   L G+ +  I+CG  H   VT
Sbjct: 79  IAYSESHTDVYSWGWGDF--GRLGHGNSSDLFTPQPIR-QLHGLKIKQIACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++  +G+    V+ G  HTAAV         
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAV--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD++ RL PE V+    E +  VACG   ++++++S
Sbjct: 187 -----TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSS 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG    AD L+P +++  +  SF+ +++ G  H  A+TS  K+Y WG
Sbjct: 242 GGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVTSDGKLYGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +R+SP  V    +++V  + CG   T  +
Sbjct: 301 WNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAV 342



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 185/367 (50%), Gaps = 33/367 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           + + SV+  + H  A+ +  +  DV+ WG G           R+G+  S  +D   P+ +
Sbjct: 66  LEIISVICGADHTIAYSESHT--DVYSWGWGDFG--------RLGHGNS--SDLFTPQPI 113

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                L +  IACG  H + VT +G++ SWG    G+LG G   D   PQ I+   GV +
Sbjct: 114 RQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPI 173

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           ++VA G  HT AVT  G+LY WG G Y  G LG G +    +P KVS    G  +  ++C
Sbjct: 174 KMVAAGAEHTAAVTEDGELYGWGWGRY--GNLGLGDRKDRLVPEKVS-LPHGEKMVMVAC 230

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HT  V+S+G L+T+G   +G LGHGD+    IP ++E L+G   +++S G  HT AV
Sbjct: 231 GWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAV 290

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         TS GKL+ WG    G++G GD   R  P  V   +++ +  ++CG 
Sbjct: 291 --------------TSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGW 336

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             ++A+T   +V++ G    GQLG    +G    R    I ++   + +CG +  +++  
Sbjct: 337 RHTLAVTERQNVFSWGRGTNGQLG----NGECTDRNVPVIIKALSVDGSCGQHIESSMVD 392

Query: 539 TSKVYTW 545
           +S   TW
Sbjct: 393 SSSGKTW 399



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIA 519
           E  AP+    +  ++ G   SVAL +   V T G    GQLG   A D L PT +   + 
Sbjct: 8   EVTAPV--RRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILS-TLE 64

Query: 520 ESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
              +  V CGA H  A + S + VY+WG G  G+LGHG+  +  +P  +  L   ++K++
Sbjct: 65  GLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQI 124

Query: 579 VCG 581
            CG
Sbjct: 125 ACG 127


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 194/388 (50%), Gaps = 29/388 (7%)

Query: 185 VSSSSHGSAHEDFDSLGDVFI-WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V S S G++H      GD+   WG G  +G LG G+           +  LP  + +   
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRG-EDGQLGHGD---------AEERHLPLVISALDD 65

Query: 244 LDVHNIACGARHAVLVTKQGE-IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
            ++ +I CGA H    ++    ++SWG    GRLGHG  +D+  P+ I+ L G+ ++ +A
Sbjct: 66  CEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIA 125

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           CG+ H  A+T  G++++WG     +G LG G      +P KV+   +GI +  ++ G  H
Sbjct: 126 CGDSHCLAITGDGEVHSWG--RNQNGQLGLGHTEDVLVPNKVAA-FEGIAVKMLAAGAEH 182

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TA VT +G L+ +G G +G LG GD     +P EV  + G +   V+CG  HT AV    
Sbjct: 183 TAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVA--- 239

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G L+T+G    G+LGHGD E  L P  V  L ++ I  V+ G   +V
Sbjct: 240 -----------NSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTV 288

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           AL   G +Y  G   +GQ+G    D     ++   I    V  V CG  H  A+T    V
Sbjct: 289 ALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           Y+WG+G +GQLGHGD  +R  P  ++ L
Sbjct: 349 YSWGRGTSGQLGHGDAVDRCVPKRIELL 376



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 173/345 (50%), Gaps = 20/345 (5%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +++ GA H V +     + SWG    G+LGHG   +   P +I  L    +  + CG 
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 306 YHTCAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            HT A + S   +Y+WG G +  G LGHG+    +IPR + G L G+ +  I+CG  H  
Sbjct: 76  DHTTARSESTRTVYSWGWGDF--GRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHCL 132

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T  G + ++G    G LG G      +P +V    G+    ++ G  HTAAV      
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAV------ 186

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T  GKL+ WG G  G LG GD+  RL P  VA +  E +  VACG   ++A+
Sbjct: 187 --------TESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAV 238

Query: 485 TTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
             SG++YT G + YGQLG     D LVP +V   +    ++ V+ G  H  AL    ++Y
Sbjct: 239 ANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVALDEDGELY 297

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            WG    GQ+G G+ D+ NSP L+  + +++V RV CG   T  I
Sbjct: 298 GWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAI 342



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK +   +   V  + CG RH V +T +G ++SWG  + G+LGHG   D   P+ IE+LS
Sbjct: 318 PKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLS 377


>gi|449476265|ref|XP_004154689.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 171

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 124/188 (65%), Gaps = 28/188 (14%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           +++V    E FSWGEE GGRLGHG E+D  HP+LI+ LS + VELVACGE HTCAVT S 
Sbjct: 4   SLVVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSN 63

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           DLYTWGDGTYNS +LGHG+  S WIPR+V                  TA+V  AG LFT 
Sbjct: 64  DLYTWGDGTYNS-VLGHGNDASHWIPRRV------------------TALVICAGKLFT- 103

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS-GSTS 434
               FGALGH D  S SI +EVE+L+GLRT R +CGVWHT AV+   +    +P+  + S
Sbjct: 104 ----FGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVL---EVIIGNPNWNNNS 156

Query: 435 CGKLFTWG 442
            GKLFTWG
Sbjct: 157 LGKLFTWG 164



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 49/196 (25%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           VV      F++G+   G LGHG       P+ ++ L  L+   V+CG  HT AV ++ D 
Sbjct: 6   VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSND- 64

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGR-LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                        L+TWGDG     LGHG+      P  V  L+   IC           
Sbjct: 65  -------------LYTWGDGTYNSVLGHGNDASHWIPRRVTALV---IC----------- 97

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL------- 536
              +G ++T     +G LG    D +  ++    +        ACG +H  A+       
Sbjct: 98  ---AGKLFT-----FGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGN 149

Query: 537 -----TSTSKVYTWGK 547
                 S  K++TWG+
Sbjct: 150 PNWNNNSLGKLFTWGR 165



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 48/192 (25%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           +   + F WGE        GGE          +DA  PK +++   L V  +ACG  H  
Sbjct: 8   EHFSEFFSWGEEYGGRLGHGGE----------SDAHHPKLIDALSNLKVELVACGECHTC 57

Query: 258 LVTKQGEIFSWGEES-GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
            VT   ++++WG+ +    LGHG +A    P+ +         LV C          +G 
Sbjct: 58  AVTLSNDLYTWGDGTYNSVLGHGNDASHWIPRRV-------TALVIC----------AGK 100

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV---------- 366
           L+T+G        LGH  + S  I ++V  +L G+  +  +CG+WHT  V          
Sbjct: 101 LFTFGA-------LGHKDRDSISISKEVE-SLKGLRTARAACGVWHTIAVLEVIIGNPNW 152

Query: 367 --TSAGHLFTFG 376
              S G LFT+G
Sbjct: 153 NNNSLGKLFTWG 164



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           + F+WG+   GRLGHG +     P+ +  L +  +  VACG   + A+T S  +YT G  
Sbjct: 12  EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDLYTWGDG 71

Query: 497 AYGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
            Y  +     D    +P RV                   A +    K++T+     G LG
Sbjct: 72  TYNSVLGHGNDASHWIPRRV------------------TALVICAGKLFTF-----GALG 108

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H D+D+ +    V+ LK  +  R  CG+  T  +
Sbjct: 109 HKDRDSISISKEVESLKGLRTARAACGVWHTIAV 142



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           S+ ++WG+   G+LGHG + + + P L+D L + +V+ V CG   T  + L
Sbjct: 11  SEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTL 61


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 192/396 (48%), Gaps = 39/396 (9%)

Query: 215 LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGG 274
           L  G  R+   FS   ++  P+ V S   L +  I CG+ H + +   G+I SWG    G
Sbjct: 81  LTAGATRIHGRFS-TYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESG 139

Query: 275 RLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS 334
           +LGH   +  S P +I+ L+   V+ VACG   + A+   G LYTWG   Y  G LG G 
Sbjct: 140 QLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRY--GQLGQGD 197

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI- 393
           + S  IPR +  +++  H+  ++CG  H  V+T++  ++T+G+ S+G LGHG      + 
Sbjct: 198 RTSSAIPRMLP-SMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQ 256

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P+ V  + GL   ++  G  H+  +              TS G ++TWG GD G+LGHGD
Sbjct: 257 PKSVRVMSGLDIKQIVAGENHSCVM--------------TSFGDIYTWGRGDFGQLGHGD 302

Query: 454 KEPRLFPECVAPLIDENICQ-VACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-----AD 507
            E +  P  ++PL  +     +  G D  +A+T SG VY+ G   +GQLG  V       
Sbjct: 303 MESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKS 362

Query: 508 GLVPTRVDGEIAESF-----------VEEVACGAYHVAALTSTSK-VYTWGKGANGQLGH 555
              P+ V      SF           +  ++CG++HV A+T     ++ WG+G +GQLG 
Sbjct: 363 NRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGL 422

Query: 556 GDKDN--RNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             +D   R  P  V  +K   V    C  N + ++ 
Sbjct: 423 DPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVA 458



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 198/443 (44%), Gaps = 69/443 (15%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            D+ G +  WG G  +G LG        SFS  +    P  ++   +  V  +ACG   +
Sbjct: 124 LDASGKIRSWGRG-ESGQLGHA------SFSHSS---TPSIIDELASQRVKEVACGVAFS 173

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             + + G++++WG    G+LG G     + P+++  ++  +V L+ACG  H   +T S D
Sbjct: 174 AALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRD 233

Query: 317 LYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +YTWG+ +Y  G LGHG  K  C  P+ V   + G+ +  I  G  H+ V+TS G ++T+
Sbjct: 234 VYTWGNNSY--GQLGHGFRKKHCLQPKSVR-VMSGLDIKQIVAGENHSCVMTSFGDIYTW 290

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G G FG LGHGD  S  IP  +  L     T+ S  V     ++  T S           
Sbjct: 291 GRGDFGQLGHGDMESKDIPTLLSPLD--PKTQASLIVSGADFIMAMTYS----------- 337

Query: 436 GKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPLIDE-----------NICQVACGHD 479
           G +++WG    G+LGHG      K  R   + ++P I             ++  ++CG  
Sbjct: 338 GAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSH 397

Query: 480 LSVALTTSGH-VYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYH--- 532
             +A+T     ++  G   +GQLG+   D     +P  V  ++    V   AC   H   
Sbjct: 398 HVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVK-KMKGMIVLAAACSENHSVV 456

Query: 533 VAALTSTS-----KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ----------VKR 577
           VA +  +      KV++WG+G+ GQLG+G   +   P + + ++D Q            R
Sbjct: 457 VATMPGSGPKGDMKVFSWGRGSFGQLGYG---SGKVPVMKETVQDNQGAKGLLWKRSTVR 513

Query: 578 VVCGLNFTAIICLHKWVSSVDHS 600
               L F        W SS D S
Sbjct: 514 PTTSLGFADATKKASWKSSTDTS 536


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 208/445 (46%), Gaps = 58/445 (13%)

Query: 176 TFRISLSSVVSSS-SHGSAHEDFDSLGDV--FIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           T+R++ S     + +HG  +E F +L D    ++  G+ +    G  H VG      +D 
Sbjct: 204 TWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDD---GPHHEVGEGGEGWSD- 259

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           + P  V+  + L V  + CG +HA ++T  GEIF+WG    GRLGHG    +  P+ IE 
Sbjct: 260 VSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEA 319

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+    VACG  +T AVT SG+LYTWG G   +G LG G       P +V    +G+H
Sbjct: 320 LEGIPCVQVACGFAYTAAVTASGELYTWGAG--ENGRLGLGDVADRHTPSRV----EGLH 373

Query: 353 --LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG-----LRT 405
             +  +  G  H+ V+T  G ++ FG   +   GHGDH     PR + T  G     +R 
Sbjct: 374 SKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQ 431

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLF---- 459
             V  G +HT A+              T  G+++ WG     +LG G+    PR      
Sbjct: 432 ISVGPGGYHTMAL--------------TCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAY 477

Query: 460 ----PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV----- 510
               P+ V  L+  NI +V  G   S ALT  G +Y  G    GQLG+    G       
Sbjct: 478 FLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERG 537

Query: 511 -PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
            P + D  + +      ++++ACG  H  A+    +V+++G G  GQLGH      + P 
Sbjct: 538 HPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPR 597

Query: 566 LVDFLKD--KQVKRVVCGLNFTAII 588
           LV  LK   +++  V CG N T ++
Sbjct: 598 LVQALKSTRREIMHVACGNNCTLVL 622



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           ++    L +  IACG  H+V V + GE++S+G    G+LGH        P+L++ L    
Sbjct: 547 IDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTR 606

Query: 298 VEL--VACGEYHTCAVTRSGDL 317
            E+  VACG  + C +  +G +
Sbjct: 607 REIMHVACG--NNCTLVLAGGV 626


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 193/390 (49%), Gaps = 31/390 (7%)

Query: 196  DFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
            D D    V +WG  +    G L G + +V  +FS+    L P          +H IA G+
Sbjct: 3069 DQDLPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------IH-IAGGS 3116

Query: 254  RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAV 311
            +   +V+++G +F+ GE + GRLG G   +V  P  + +L    V+ VA   G  H  A+
Sbjct: 3117 KSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3176

Query: 312  TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            T  G +++WG+G    G LGHG++ +   PR+V   L    +  ++CG  H+A ++S G 
Sbjct: 3177 TLDGKVFSWGEG--EDGKLGHGNRTTLDKPRQVEA-LRAKKIRDVACGSSHSAAISSQGE 3233

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D        
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTED-------- 3285

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+
Sbjct: 3286 ----GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3341

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            T G   Y +LG      +   +  G +    V  VA GA H  A+T + +VY WG   +G
Sbjct: 3342 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHG 3401

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            Q G G+      P LV  L D  V RV CG
Sbjct: 3402 QQGSGNTFVNKKPALVIGLDDVFVNRVACG 3431



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 175/349 (50%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 4248 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4307

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG++VS   P+ V  +L G+ 
Sbjct: 4308 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEG--EDGKLGHGNRVSYDRPKLVE-HLHGMS 4364

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +T++G + T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 4365 VADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 4424

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 4425 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4472

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   + +LG    D +   +    +    +  +A G+ H
Sbjct: 4473 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4532

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A + + +VYTWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 4533 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCG 4581



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 167/342 (48%), Gaps = 37/342 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVL 258
            G VF  GEG  NG LG G   V Y+        LP  +       V  +A   G +HA+ 
Sbjct: 3126 GRVFACGEG-TNGRLGLG---VTYNVP------LPHQLPVLHQYVVKKVAVHSGGKHALA 3175

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T  G++FSWGE   G+LGHG    +  P+ +E L    +  VACG  H+ A++  G+LY
Sbjct: 3176 LTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELY 3235

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFG 376
            TWG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++G
Sbjct: 3236 TWGLGEY--GRLGHGDNATQLKPKLVAA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWG 3292

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G    +  P E+E L G+   ++ CG   + A+              T  G
Sbjct: 3293 DGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL--------------TRAG 3338

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T SG VY  G  
Sbjct: 3339 EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN 3398

Query: 497  AYGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
             +GQ G    +  V   P  V G + + FV  VACG+ H  A
Sbjct: 3399 DHGQQG--SGNTFVNKKPALVIG-LDDVFVNRVACGSSHSIA 3437



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 4299 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE 4358

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4359 HLHGMSVADIACGSAHSAAITASGQVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4415

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4416 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4475

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4476 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4521

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4522 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCG 4581

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4582 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4629

Query: 586  AIIC 589
             ++C
Sbjct: 4630 ELLC 4633



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G +RV Y          PK VE    + V +IACG+ H+  +T
Sbjct: 4330 GEVYAWGEG-EDGKLGHG-NRVSYDR--------PKLVEHLHGMSVADIACGSAHSAAIT 4379

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++ +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4380 ASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4439

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4440 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4496

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 4497 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 4540

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  V+ L  ++I +V CG   ++AL+TS
Sbjct: 4541 EVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 159/322 (49%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            I+ WG    G+LG    + +  P   E LS +    +A GE    AVT  G L+  G   
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG--- 4282

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y SG          W    + G+L  + +  ++   G  H   +T+ G ++ +G+G  G 
Sbjct: 4283 YGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4342

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ VE L G+    ++CG  H+AA+              T+ G++ TWG
Sbjct: 4343 LGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAI--------------TASGQVLTWG 4388

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +T   +V++ G   YG+
Sbjct: 4389 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4448

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  +P +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG  D
Sbjct: 4449 LGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4507

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4508 HVRRPKKVAALQGKKIISIATG 4529



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 166/334 (49%), Gaps = 33/334 (9%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +  WG     +LG  + + V  P   + +S +    +A G      V++ G ++  G+GT
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS-----CGLWHTAVVTSAGHLFTFGDGS 379
              +G LG G   +  +P +    L  +H   +       G  H   +T  G +F++G+G 
Sbjct: 3136 --NGRLGLGVTYNVPLPHQ----LPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3189

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+  +   PR+VE LR  +   V+CG  H+AA+              +S G+L+
Sbjct: 3190 DGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAI--------------SSQGELY 3235

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +L P+ VA L    + QVACG     ++ALT  G V++ G   
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGD 3295

Query: 498  YGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            +G+LG   ++G   P  ++  ++   V ++ CGA    ALT   +V+TWGKG   +LGHG
Sbjct: 3296 FGKLGRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3354

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               +   P  +  L+ ++V  V  G    A+ CL
Sbjct: 3355 GDQHVRKPQPIGGLRGRRVIHVAVG----ALHCL 3384



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    +S++ +   S+H +A     + G V  WG+G   G LG G+      
Sbjct: 4350 SYDRPKLVEHLHGMSVADIACGSAHSAA---ITASGQVLTWGKG-RYGRLGHGDSE---- 4401

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 4402 -----DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4456

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 4457 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKK 4514

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    + +G ++T+GD   G LG G   +   PR V  L+G 
Sbjct: 4515 VAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGK 4573

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSP 429
               +V+CG  HT A+  +  S    P
Sbjct: 4574 HIVKVTCGSAHTLALSTSQLSERLRP 4599



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 31/308 (10%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             V  + C     +L++++G++ +W      RL        + PQ +E         +A 
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW------RLSKPE----AEPQPLEEAGHETFISIAG 636

Query: 303 -CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
            C   H  A+  + + Y+WG G  +   LGHG   +  +P K++  L+   +  + CG  
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVFCGCT 693

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++AV+T  G+L T+G G++  LGHG+     +P           T V+    HT  V VA
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLP-----------TLVAALAEHT-VVDVA 741

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
             S  +     TS G +F WGDGD G+LG+G+    L P  V  L    + ++  G   S
Sbjct: 742 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRIFAGSQYS 799

Query: 482 VALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           VAL++ G VYT G A     QL      G    R+   +    + ++A G  H  AL+S+
Sbjct: 800 VALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSS 859

Query: 540 SKVYTWGK 547
            +V+ WG+
Sbjct: 860 GEVFGWGR 867



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  + L+     L+    VT  G LF 
Sbjct: 4226 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKLFA 4280

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 4281 TGYGSGGRLGVGGSDSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 4328

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ V  L   ++  +ACG   S A+T SG V T G
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWG 4388

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +T    V++WG G  G
Sbjct: 4389 KGRYGRLGHGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDYG 4447

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4448 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 4484



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG G+  RLGHGD   R  P  +A L    +  V CG   S  +T  G++ T G   Y
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTY 712

Query: 499 GQLGVPVADG-LVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGH 555
            +LG   +D   +PT V   +AE  V +VA G+   H  ALTS   V+ WG G  G+LG+
Sbjct: 713 ARLGHGNSDDRCLPTLV-AALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 771

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G+ +    P LV+ L   +V+R+  G  ++  +
Sbjct: 772 GNCNGSLQPILVESL--PRVQRIFAGSQYSVAL 802



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 132/307 (42%), Gaps = 51/307 (16%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS  + + WG         G +HR+G+  +      +P  + +     V ++ CG  ++
Sbjct: 646 IDSNHNAYSWG--------AGEDHRLGHGDTHARA--VPTKIAALEQHCVQSVFCGCTYS 695

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
            ++T  G + +WG  +  RLGHG   D   P L+  L+   V  VA   G+ H+ A+T  
Sbjct: 696 AVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSE 755

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI------HLSYISCGLWHTAVVTS 368
           G ++ WGDG Y  G LG+G+          +G+L  I       +  I  G  ++  ++S
Sbjct: 756 GLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRIFAGSQYSVALSS 804

Query: 369 AGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            G ++T+G  +   LGH          S+PR V +L+  R   ++ GV H  A+      
Sbjct: 805 EGQVYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLAL------ 856

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSV 482
                   +S G++F WG  D  ++       EP L    +  L       +AC    S+
Sbjct: 857 --------SSSGEVFGWGRNDCQQVCPSSVSSEPLLRSPILVALPTLPASGIACTAGQSL 908

Query: 483 ALTTSGH 489
             T S H
Sbjct: 909 IWTQSSH 915



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4223 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4272

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4273 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4326

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++ +V T
Sbjct: 4327 TTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLT 4386

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4387 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4432



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +  WG  DK +LG         P     +       +A G      ++  G V+  G   
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLGH 555
             G+LG+ V   +        + +  V++VA   G  H  ALT   KV++WG+G +G+LGH
Sbjct: 3136 NGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3195

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            G++   + P  V+ L+ K+++ V CG + +A I     L+ W
Sbjct: 3196 GNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTW 3237



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA-C 528
            + QV C  +  + L+  G ++        +L  P A+   P  ++    E+F+     C
Sbjct: 588 QVKQVVCSENQVLLLSQEGKLHAW------RLSKPEAE---PQPLEEAGHETFISIAGHC 638

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              H  A+ S    Y+WG G + +LGHGD   R  PT +  L+   V+ V CG  ++A+I
Sbjct: 639 EGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVI 698


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 182/372 (48%), Gaps = 34/372 (9%)

Query: 201 GDVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
           GD+F WG        LGG E  +          L+P  V+   A ++  IACG  + V++
Sbjct: 31  GDMFCWGNTRHGELGLGGIEDEI---------ILVPCQVDFKKASEIQQIACGENYTVVI 81

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T  G+I+S G    G+LGH R       QLI  L     + VACG YHT AV   G L++
Sbjct: 82  THDGKIYSCGNNDYGQLGHERGR--KRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139

Query: 320 WGDGTYNSGLLGHGSK--VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           WG  +   G LG  SK  + C  PR V   L    +  ++CG+ H   +T+ G L+++G 
Sbjct: 140 WGSNS--EGQLGLNSKNFMEC-SPRMVK-TLGTSIIVQVACGMKHALALTNNGELYSWGS 195

Query: 378 GSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            S G LG G  I + + P+ + TL G+    ++CG +H+ A+              +  G
Sbjct: 196 NSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAI--------------SKSG 241

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            +F WG    G+LG  D + R  P  +  L +  IC  ACG + SV LT  G V+T G+ 
Sbjct: 242 AIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAG 301

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGH 555
            YGQLG    +  +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGN 361

Query: 556 GDKDNRNSPTLV 567
               +  +P +V
Sbjct: 362 NSTRSIPTPQVV 373



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 29/330 (8%)

Query: 259 VTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           + K+G++F WG    G LG G   D  +  P  ++      ++ +ACGE +T  +T  G 
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 317 LYTWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           +Y+ G+  Y  G LGH  G K       ++   LD      ++CG +HT  V   G LF+
Sbjct: 87  IYSCGNNDY--GQLGHERGRK-----RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139

Query: 375 FGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +G  S G LG +  +     PR V+TL      +V+CG+ H  A+              T
Sbjct: 140 WGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALAL--------------T 185

Query: 434 SCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           + G+L++WG   +G+LG G D    + P+ +  L    I  +ACG   S+A++ SG ++ 
Sbjct: 186 NNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFG 245

Query: 493 MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G   +GQLG+    +  +P ++   +  + +   ACG      LT    V+T G G  G
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQ-TLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 304

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           QLGHG  +N   P  V  L    V ++ CG
Sbjct: 305 QLGHGSNNNEILPRQVMELMGSTVTQISCG 334



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 31/287 (10%)

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           ++ + GD++ WG+  +    LG        +P +V        +  I+CG  +T V+T  
Sbjct: 26  SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFK-KASEIQQIACGENYTVVITHD 84

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT---TRVSCGVWHTAAVVVATDSSS 426
           G +++ G+  +G LGH         + ++ + GL      +V+CG +HT AV        
Sbjct: 85  GKIYSCGNNDYGQLGH-----ERGRKRLQLILGLDAFVFKKVACGAYHTIAV-------- 131

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC----VAPLIDENICQVACGHDLSV 482
                    G+LF+WG   +G+LG   K    F EC    V  L    I QVACG   ++
Sbjct: 132 ------NEWGQLFSWGSNSEGQLGLNSKN---FMECSPRMVKTLGTSIIVQVACGMKHAL 182

Query: 483 ALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           ALT +G +Y+ GS + GQLG+ V     V  ++   +A   +  +ACG YH  A++ +  
Sbjct: 183 ALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGA 242

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           ++ WGK   GQLG  D  NRN P  +  L++ ++    CG  F+  +
Sbjct: 243 IFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFL 289


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 207/428 (48%), Gaps = 37/428 (8%)

Query: 191  GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
            GS  +D  +   VF+WG    +  LGG          + +    P   E+   L    I 
Sbjct: 2906 GSGVKDIQT--QVFVWGLNDKDQ-LGG---------PKGSKIKTPGINETLSTLKCVQIV 2953

Query: 251  CGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYH 307
             G++    VT+ G++F+ GE + GRLG G  A +V  P+ +  LS   ++ VA   G  H
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRH 3013

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
              A+T  G +++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A + 
Sbjct: 3014 AMALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LRSKRVRDIACGGSHSAAII 3070

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            S G L+T+G G +G LGHGD+ +   P+ V+ L G R  +V+ G    A  +  TDS   
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGS-RDAQTLALTDS--- 3126

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                    G +++WGDGD G+LG G  E    P  +  L    +CQ+ CG   S+ALT S
Sbjct: 3127 --------GTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKS 3178

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            G V+T G   Y +LG      +   ++   +    V  VA GA H  ++    +VY WG 
Sbjct: 3179 GQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGD 3238

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
              +GQ G+        P LV  L+  ++ RV CG + +   C      ++D SV +S H 
Sbjct: 3239 NDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWC------TLDSSVPAS-HE 3291

Query: 608  PFGFRRKR 615
            P  F   R
Sbjct: 3292 PVLFSSAR 3299



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 188/380 (49%), Gaps = 27/380 (7%)

Query: 205  IWGEGIAN-GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
            IWG G  + G LGG E              LP + E+   +    +  G +    +T  G
Sbjct: 3938 IWGWGHNHRGQLGGVEG---------AKVKLPVSCETLATMRPVQLIGGEQTLFSITGDG 3988

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWG 321
            ++ + G  +GGRLG G    V+ P LIE +  V +  VA   G  H  A++  G++Y+WG
Sbjct: 3989 KVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWG 4048

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            +G    G LGHG++  C  PR +  +L G  +  I+ G  H+A +TS G L+++G G +G
Sbjct: 4049 EG--EDGKLGHGNRSPCDRPRAIE-SLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYG 4105

Query: 382  ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
             LGHGD    + P+ V+ L+G R T V+CG      + +  D S            +++W
Sbjct: 4106 RLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDS------------VWSW 4153

Query: 442  GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            GDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y +L
Sbjct: 4154 GDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRL 4213

Query: 502  GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            G    D +   R    +    +  +ACG+ H  A T   +VYTWG    GQLG G  +  
Sbjct: 4214 GHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAI 4273

Query: 562  NSPTLVDFLKDKQVKRVVCG 581
              P LV  L+ K++ RV CG
Sbjct: 4274 QRPRLVAALQGKKINRVACG 4293



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 157/317 (49%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P+ IE 
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  +A G  H+  +T +G+LY+WG G Y  G LGHG       P+ V   L G  
Sbjct: 4072 LRGKEVVDIAAGGAHSACITSTGELYSWGKGRY--GRLGHGDSEDQTKPKLVDA-LKGYR 4128

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            ++ ++CG     T  +T    ++++GDG +G LG G      +P +++ L+GL   +V C
Sbjct: 4129 VTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVEC 4188

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG ++    P     L  + 
Sbjct: 4189 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKK 4234

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            I  +ACG    VA T +G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4235 IVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4294

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  ST+K    GK
Sbjct: 4295 AHSLAW-STNKPVNAGK 4310



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/321 (34%), Positives = 159/321 (49%), Gaps = 34/321 (10%)

Query: 159 LTN-AFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
           +TN A P + ++ S+ A+   I L++     S GS      S GDV+ WG    NG  G 
Sbjct: 458 MTNSAEPQSMHEISTLADIEIIKLAA----HSEGSHCLALTSEGDVYSWG----NGDFG- 508

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
              ++G+  +   D+  P  +       V N+ACG+ H+  +T  GE+F+WG  S GRLG
Sbjct: 509 ---KLGHGDTVTCDS--PMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLG 563

Query: 278 HGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
            G   D+  P L+  L GV V  VAC  G+  T A+  +G +Y+WGDG Y  G LG G  
Sbjct: 564 LGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY--GKLGRGGS 621

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
             C  P+ V   L G+ ++ + CG  ++A V   G +FT+G+G    LGHG       PR
Sbjct: 622 EGCKAPKLVD-KLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPR 680

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           +VETL G   T +S G  H  A              +T  G+L +WG  DKG+LG G   
Sbjct: 681 QVETLAGKHVTSLSLGSHHCLA--------------TTEEGELLSWGRNDKGQLGEGHTG 726

Query: 456 PRLFPECVAPLIDENICQVAC 476
            +  P   A L+ + I  + C
Sbjct: 727 LKAEPAFAASLLGKCIIGITC 747



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 182/378 (48%), Gaps = 51/378 (13%)

Query: 221 RVGYSFSRQTDALLPKAVE--STMALDVHNIACGAR----HAVLVTKQGEIFSWGEESGG 274
           R G  + + T++  P+++   ST+A D+  I   A     H + +T +G+++SWG    G
Sbjct: 451 RTGRVY-KMTNSAEPQSMHEISTLA-DIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFG 508

Query: 275 RLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS 334
           +LGHG       P LI  L G +V  VACG +H+ A+T SG+L+TWG G++  G LG GS
Sbjct: 509 KLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSF--GRLGLGS 566

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
                 P  VSG L G+ +  ++CG     T  +   G ++++GDG +G LG G      
Sbjct: 567 TEDILTPALVSGLL-GVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCK 625

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P+ V+ L+GL  TRV CG  ++AAV                 G +FTWG+G+  +LGHG
Sbjct: 626 APKLVDKLQGLDVTRVYCGPQYSAAVC--------------KNGAVFTWGNGEGYKLGHG 671

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            +E   FP  V  L  +++  ++ G    +A T  G + + G    GQLG    +G    
Sbjct: 672 TEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLG----EGHTGL 727

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           + +   A S +     G   +    S+++ + W + + G +          P  + F+ D
Sbjct: 728 KAEPAFAASLL-----GKCIIGITCSSAQTFAWSRPSRGTM---------IPMRIPFVVD 773

Query: 573 KQVKRVVCGLNFTAIICL 590
                 VC + F  +  L
Sbjct: 774 ------VCRVTFEQLDAL 785



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 33/341 (9%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ-LIEILSGVNVELVAC 303
           D+  +AC +   +++ + G ++             +  + + PQ + EI +  ++E++  
Sbjct: 435 DIIQVACSSNSLLILLRTGRVY-------------KMTNSAEPQSMHEISTLADIEIIKL 481

Query: 304 GEY----HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
             +    H  A+T  GD+Y+WG+G +  G LGHG  V+C  P  ++  L G  +  ++CG
Sbjct: 482 AAHSEGSHCLALTSEGDVYSWGNGDF--GKLGHGDTVTCDSPMLIN-ELHGKSVVNVACG 538

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+A +T++G LFT+G GSFG LG G       P  V  L G+    V+CG      + 
Sbjct: 539 SHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIA 598

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           +A              G +++WGDG+ G+LG G  E    P+ V  L   ++ +V CG  
Sbjct: 599 LA------------DTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQ 646

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            S A+  +G V+T G+    +LG    + +   R    +A   V  ++ G++H  A T  
Sbjct: 647 YSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEE 706

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
            ++ +WG+   GQLG G    +  P     L  K +  + C
Sbjct: 707 GELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITC 747



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 126/251 (50%), Gaps = 17/251 (6%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR  A E+ R     VV  ++ G+      S G+++ WG+G   G LG G+         
Sbjct: 4064 DRPRAIESLRGK--EVVDIAAGGAHSACITSTGELYSWGKG-RYGRLGHGDSE------- 4113

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D   PK V++     V ++ACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 4114 --DQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV 4171

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  I+ L G+ V  V CG   + A+T+SG +YTWG G Y+   LGHG++     PR+ + 
Sbjct: 4172 PMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGTEDHIRRPRRCT- 4228

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+CG  H    T AG ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 4229 TLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN 4288

Query: 407  RVSCGVWHTAA 417
            RV+CG  H+ A
Sbjct: 4289 RVACGSAHSLA 4299



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 132/308 (42%), Gaps = 78/308 (25%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WGEG  +G LG         FSR  +   P+ +E+  +  V +IACG  H+  + 
Sbjct: 3021 GKVFSWGEG-DDGKLG--------HFSRM-NCDKPRLIEALRSKRVRDIACGGSHSAAII 3070

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              G++++WG    GRLGHG       P+L++ L G  V  VA G  +  T A+T SG +Y
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG +  G LG G    C +P  +   L+G+ +  I CG   +  +T +G ++T+G G
Sbjct: 3131 SWGDGDF--GKLGRGGSEGCSVPHPIE-RLNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTT-------------------------------- 406
             +  LGHG       P+ VETL+G + T                                
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNS 3247

Query: 407  --------------------RVSCGVWHTAAVVVATDS-----------SSSSPSGSTSC 435
                                RV+CG  H+ A      S           S+  P GS+  
Sbjct: 3248 TTTVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDSSVPASHEPVLFSSARDPLGSSLI 3307

Query: 436  GKLFTWGD 443
            G+L ++ D
Sbjct: 3308 GELLSYSD 3315



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 19/211 (9%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G++++WG+G+ G+LGHG++ P   P  +  L  + +  +A G   S  +T++G +Y+ G 
Sbjct: 4042 GEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGK 4101

Query: 496  AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQL 553
              YG+LG   ++     ++   +    V +VACG+       +T    V++WG G  G+L
Sbjct: 4102 GRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKL 4161

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKWVSSVDHSVCSSCHNPF 609
            G G  D    P  +D L+   V +V CG  F+  +     ++ W     H +    H   
Sbjct: 4162 GRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRL---GHGTE 4218

Query: 610  GFRRKRHNCYN----------CGLVFCKACS 630
               R+   C            CG + C AC+
Sbjct: 4219 DHIRRPRRCTTLQGKKIVSIACGSLHCVACT 4249



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%)

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            +AL+  G VY+ G    G+LG          R    +    V ++A G  H A +TST +
Sbjct: 4036 LALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGE 4095

Query: 542  VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +Y+WGKG  G+LGHGD +++  P LVD LK  +V  V CG      +C+
Sbjct: 4096 LYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCI 4144


>gi|297733996|emb|CBI15243.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/213 (51%), Positives = 138/213 (64%), Gaps = 9/213 (4%)

Query: 1   MLIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKD 60
           +L+WY+G+EE+QL+L QVSRII GQ TATF++YPR EKE QSFSL+Y D SLD+ICKDKD
Sbjct: 53  VLLWYAGREEKQLQLCQVSRIIQGQHTATFRQYPRLEKEDQSFSLMYKDGSLDIICKDKD 112

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSPTVTPFDFGDI------ 114
           EAEVW V L+ALI++  +  W   T + S S D     IR+ +P     +  DI      
Sbjct: 113 EAEVWFVALRALISQCNYHNWINETRSDSGSLDH-HTDIRRNTPLTVSANSSDIISKDPE 171

Query: 115 --QGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFPDNSNDRSS 172
             Q   +P  +     LG+AF+DIISYT A    +R +SV  S S L+    D+ N  SS
Sbjct: 172 NVQTILIPFQHPRKKRLGRAFSDIISYTGATKGFTRVESVPSSLSSLSVGGIDDPNGCSS 231

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFI 205
           A +TF ISLSS VSS   GS+ EDFD+LGDVFI
Sbjct: 232 AVDTFHISLSSAVSSPGQGSSREDFDALGDVFI 264


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 19/337 (5%)

Query: 248  NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GE 305
            +IA G++   +V++ G++++ GE + GRLG G   +V  P+ + ILS   V+ VA   G 
Sbjct: 3065 HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGG 3124

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H  A+T  G +++WG+G    G LGHG++++   P+ +   L    +  I+CG  H+A 
Sbjct: 3125 KHAMALTLDGKVFSWGEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAA 3181

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            +TS+G L+T+G G +G LGHGD+ +   P+ V  L+  R  +V+CG      + +  D  
Sbjct: 3182 ITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTED-- 3239

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                      G +F+WGDGD G+LG G  E    P  V  L    + Q+ CG   S+ALT
Sbjct: 3240 ----------GLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALT 3289

Query: 486  TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             +G V+T G   Y +LG      +  PT + G   +  +  VA GA H  A+T + +VY 
Sbjct: 3290 KAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAVTDSGQVYA 3348

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            WG   +GQ G G+      P+LV  L    V RV CG
Sbjct: 3349 WGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 196/404 (48%), Gaps = 34/404 (8%)

Query: 204  FIWGEGIANGFLGGGEHRV---GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            F WG G +  F  G  HR    G   SR  +   P   E+   L    IA G +    VT
Sbjct: 4083 FSWG-GASTIFGWGHNHRGQLGGLDGSRIKN---PTPCEALSLLRPIQIAGGEQTLYAVT 4138

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    V+ P L+E L  V ++ VA   G  H  A++  G+++
Sbjct: 4139 PDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVF 4198

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ S   P+ +  +L GI +  I+CG  H+A +T  GH+ T+G G
Sbjct: 4199 SWGEG--EDGKLGHGNRDSYDRPKLIE-SLSGIGVVDIACGSAHSACITIQGHVLTWGKG 4255

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L G R   ++CG      + +  D +            +
Sbjct: 4256 RYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------------V 4303

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-----ICQVACGHDLSVALTTSGHVYTM 493
            ++WGDGD G+LG G  +      C  P+  E+     + +V CG   SVALT SG VYT 
Sbjct: 4304 WSWGDGDYGKLGRGGSD-----GCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTW 4358

Query: 494  GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            G   Y +LG    D +   +    +    +  +A G+ H  A +   +V+TWG    GQL
Sbjct: 4359 GKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQL 4418

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
            G G       P LV  L+ K + +V+CG   T  +  ++   +V
Sbjct: 4419 GDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4462



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 173/363 (47%), Gaps = 37/363 (10%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  VES   + +  +A   G +H + ++  GE+FSWGE   G+LGHG       P+LIE 
Sbjct: 4165 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIES 4224

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            LSG+ V  +ACG  H+  +T  G + TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4225 LSGIGVVDIACGSAHSACITIQGHVLTWGKGRY--GRLGHGDSEDQLQPKLVEALL-GYR 4281

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
               I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL  T+V C
Sbjct: 4282 AIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVEC 4341

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG+ +    P+ VA L  + 
Sbjct: 4342 GSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK 4387

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            I  +A G    VA + +G V+T G    GQLG      +   R+   +    + +V CG+
Sbjct: 4388 IISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGS 4447

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFTA 586
             H  AL++             QL    +   + P   D ++D   +    R+V   +F+ 
Sbjct: 4448 AHTLALSTY------------QLSEAVRPPPSPPLEYDLVRDIAPEVLHARLVLLHHFSE 4495

Query: 587  IIC 589
            ++C
Sbjct: 4496 LLC 4498



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 171/340 (50%), Gaps = 33/340 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H       +Q   L    V+    + VH+   G +HA+ +T
Sbjct: 3080 GKLYACGEG-TNGRLGLG-HNNNVPTPKQVPILSQYVVKK---VAVHS---GGKHAMALT 3131

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3132 LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTW 3191

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V+  L    +  ++CG     T  +T  G +F++GDG
Sbjct: 3192 GLGEY--GRLGHGDNCTQLKPKLVTA-LQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDG 3248

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     SIP +V+ L G+   ++ CG   + A+              T  G++
Sbjct: 3249 DFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLAL--------------TKAGEV 3294

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L  + +  VA G    +A+T SG VY  G   +
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354

Query: 499  GQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            GQ G    + +V   P+ V G +   FV  VACG+ H  A
Sbjct: 3355 GQQG--SGNTIVNKKPSLVLG-LDGIFVNRVACGSSHSVA 3391



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 29/314 (9%)

Query: 175  ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
            E+ +  +   V+ +S G       S G+VF WGEG  +G LG G      S+ R      
Sbjct: 4169 ESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNRD---SYDR------ 4218

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            PK +ES   + V +IACG+ H+  +T QG + +WG+   GRLGHG   D   P+L+E L 
Sbjct: 4219 PKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALL 4278

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            G     +AC  G+  T  +T   ++++WGDG Y  G LG G    C +P K+  +L G+ 
Sbjct: 4279 GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKVPMKIE-SLAGLG 4335

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ + CG   +  +T +G ++T+G G +  LGHG+      P++V  L+G +   ++ G 
Sbjct: 4336 VTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGS 4395

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             H  A               +  G++FTWGD D+G+LG G       P  V  L  ++I 
Sbjct: 4396 LHCVAC--------------SDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIV 4441

Query: 473  QVACGHDLSVALTT 486
            +V CG   ++AL+T
Sbjct: 4442 KVICGSAHTLALST 4455



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 169/339 (49%), Gaps = 41/339 (12%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++  WG     +LG  + + V  P    +LS +    +A G      V++ G LY  G+G
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 3088

Query: 324  TYNSGLLGHGSKV---------SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            T     LGH + V         S ++ +KV+          +  G  H   +T  G +F+
Sbjct: 3089 TNGRLGLGHNNNVPTPKQVPILSQYVVKKVA----------VHSGGKHAMALTLDGKVFS 3138

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G+G  G LGHG+ ++   P+ +ETLR  R   ++CG  H+AA+              TS
Sbjct: 3139 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAI--------------TS 3184

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYT 492
             G+L+TWG G+ GRLGHGD   +L P+ V  L D  + QVACG     ++ LT  G V++
Sbjct: 3185 SGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFS 3244

Query: 493  MGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             G   +G+LG   ++G  +P +VD  +    V ++ CGA    ALT   +V+TWGKG   
Sbjct: 3245 WGDGDFGKLGRGGSEGCSIPHQVD-RLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYY 3303

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +LGHG   +   PT +  L+ K+V  V  G    A+ CL
Sbjct: 3304 RLGHGTDQHVRKPTPIQGLRGKKVIHVAVG----ALHCL 3338



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 23/269 (8%)

Query: 236 KAVESTMA-LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           K +E T+  L  H   C  RH + +   G+++SWG   GGRLGHG  +    P  I  L+
Sbjct: 603 KGLECTIVQLAAH---CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALA 659

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V  V CG  ++ A+T SG+LYTWG GTY  G LGHG+    ++P  V+  L    + 
Sbjct: 660 DRQVTGVFCGSSYSAAITASGELYTWGRGTY--GRLGHGNSEDKYVPTLVTA-LKAHRVV 716

Query: 355 YIS--CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +++  CG  H+  VT AG  F +GDG FG LG+   + TS+P +V+  +           
Sbjct: 717 HVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQ----------- 765

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
              A+ VV   S S      T  G ++TWG G  GRLGHG+ E    P+ V  L  + I 
Sbjct: 766 ---ASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIV 822

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQL 501
            +A G    +ALT SG +Y  G   + Q+
Sbjct: 823 DLAVGLAHCLALTASGELYGWGRNDFQQI 851



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 124/251 (49%), Gaps = 22/251 (8%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H   + S+G ++++G G  G LGHGD  +  +P  +  L   + T V CG  ++AA+   
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAI--- 676

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHD 479
                      T+ G+L+TWG G  GRLGHG+ E +  P  V  L    +  VA  CG  
Sbjct: 677 -----------TASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDA 725

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTS 538
            S+ +T +G  +  G   +G+LG     G  VP +VD   A S V +V  G+    ALT 
Sbjct: 726 HSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQA-SCVVKVFSGSQFSVALTR 784

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWV 594
              VYTWGKG  G+LGHG+ ++   P +V  L+ K++  +  G    L  TA   L+ W 
Sbjct: 785 EGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844

Query: 595 SSVDHSVCSSC 605
            +    +C  C
Sbjct: 845 RNDFQQICPEC 855



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 134/271 (49%), Gaps = 21/271 (7%)

Query: 166  NSNDRSSAAETFRISLSSV-VSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVG 223
            +S DR    E    SLS + V   + GSAH    ++ G V  WG+G   G LG G+    
Sbjct: 4214 DSYDRPKLIE----SLSGIGVVDIACGSAHSACITIQGHVLTWGKG-RYGRLGHGDSE-- 4266

Query: 224  YSFSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGRE 281
                   D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G  
Sbjct: 4267 -------DQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4319

Query: 282  ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                 P  IE L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      P
Sbjct: 4320 DGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHR--LGHGNTDHVRRP 4377

Query: 342  RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
            +KV+  L G  +  I+ G  H    + AG +FT+GD   G LG G   +   PR V++L+
Sbjct: 4378 KKVAA-LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQ 4436

Query: 402  GLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            G    +V CG  HT A+     S +  P  S
Sbjct: 4437 GKHIVKVICGSAHTLALSTYQLSEAVRPPPS 4467



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 129/283 (45%), Gaps = 52/283 (18%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S GDV+ WG G   G LG G+          +   LP  + +     V  + CG+ ++  
Sbjct: 626 SSGDVYSWGSG-DGGRLGHGD---------TSAKELPTRIAALADRQVTGVFCGSSYSAA 675

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA--CGEYHTCAVTRSGD 316
           +T  GE+++WG  + GRLGHG   D   P L+  L    V  VA  CG+ H+  VT +G 
Sbjct: 676 ITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC------GLWHTAVVTSAG 370
            + WGDG +  G LG+ S V   +P +V        L   SC      G   +  +T  G
Sbjct: 736 AFAWGDGDF--GKLGNESCVGTSVPVQVD-------LPQASCVVKVFSGSQFSVALTREG 786

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            ++T+G G  G LGHG+   + +P+ V+ L G +   ++ G+ H  A+            
Sbjct: 787 TVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLAL------------ 834

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA--PLIDENI 471
             T+ G+L+ WG  D           ++ PECV   P+I   I
Sbjct: 835 --TASGELYGWGRNDF---------QQICPECVTRDPIITAPI 866



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 16/170 (9%)

Query: 431 GSTSCG-KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           G ++C  +L+ +   +  R G     PR     +  L+D+ + Q+ C  +    LT SG 
Sbjct: 525 GWSACAPELYGFTATEAIRTGIDGAMPRYSTATIDLLLDQ-VRQIVCAENCVYILTDSGT 583

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA--CGAYHVAALTSTSKVYTWGK 547
           V  +  A      + + +   P +V G   E  + ++A  C   HV AL S+  VY+WG 
Sbjct: 584 VLYLSHA------ISMTEDNYPAQVKG--LECTIVQLAAHCEGRHVLALASSGDVYSWGS 635

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           G  G+LGHGD   +  PT +  L D+QV  V CG +++A I     L+ W
Sbjct: 636 GDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTW 685


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 180/337 (53%), Gaps = 34/337 (10%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV-TRSGDLYTWGDG 323
           +++WG    G LGHG + D+  P+++E L   N++ +ACG +   A+    G +Y+WG G
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA---GHLFTFGDGSF 380
            Y  G+LG G+  S + P K++ +    ++  ISC   H A VTS    G +++FGD S 
Sbjct: 61  KY--GILGQGNLRSRFAPLKIA-SFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
             LG GD    + P+ V  L      +V+CG +H+AA+              ++ G LF 
Sbjct: 118 SQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAAL--------------SAKGNLFL 163

Query: 441 WGDGDKGRLGHGD----KEPRLF--PECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           WG GD G+LG G+     EP +    E  A ++D     VACG   +  LT  G VY  G
Sbjct: 164 WGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMD-----VACGDLHTCILTVGGLVYAFG 218

Query: 495 SAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           S  YGQ+  P  +   +P R+    ++ FV  V+CG++H AA+T   K+Y WG   +G+L
Sbjct: 219 SNIYGQIAAPSMNKFHLPYRISFNTSKRFVS-VSCGSFHSAAITENGKLYAWGLETDGRL 277

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           G GD   R+SPT V+  +DK++ R+ CG   TA + +
Sbjct: 278 GLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAALII 314



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 29/287 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG G   G LG G  R  ++         P  + S  + +V +I+C   HA  VT
Sbjct: 52  GKVYSWGLG-KYGILGQGNLRSRFA---------PLKIASFKSSNVIDISCHELHAAAVT 101

Query: 261 ---KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
                G ++S+G+ S  +LG G     + PQL+ +L+  N+  VACG+YH+ A++  G+L
Sbjct: 102 SVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNL 161

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           + WG G  + G LG G+      P  +        +  ++CG  HT ++T  G ++ FG 
Sbjct: 162 FLWGLG--DDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGS 219

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
             +G +         +P  +      R   VSCG +H+AA+              T  GK
Sbjct: 220 NIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAI--------------TENGK 265

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
           L+ WG    GRLG GD + R  P  V    D+ I ++ACG   + AL
Sbjct: 266 LYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 158/341 (46%), Gaps = 36/341 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV--LVT 260
           V+ WG GI NG LG GE           D   P+ VE+ +A ++  +ACG  H V  L  
Sbjct: 1   VYTWGSGI-NGALGHGE---------DIDIPSPRVVEALLAYNIKRLACGL-HTVFALNA 49

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA---VTRSGDL 317
           + G+++SWG    G LG G       P  I      NV  ++C E H  A   VT +G +
Sbjct: 50  EDGKVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y++GD + +   LG G       P+ V+  L+  ++  ++CG +H+A +++ G+LF +G 
Sbjct: 110 YSFGDNSNSQ--LGVGDTEPYAEPQLVT-VLNDENIIKVACGKYHSAALSAKGNLFLWGL 166

Query: 378 GSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G  G LG G++  ++ P  +    +  +   V+CG  HT  + V               G
Sbjct: 167 GDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVG--------------G 212

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            ++ +G    G++          P  ++    +    V+CG   S A+T +G +Y  G  
Sbjct: 213 LVYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLE 272

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
             G+LG+        PT V+G   +  +  +ACG+ H AAL
Sbjct: 273 TDGRLGLGDCKQRSSPTEVEG-FRDKKIGRIACGSKHTAAL 312


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 177/337 (52%), Gaps = 19/337 (5%)

Query: 248  NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GE 305
            +IA G++   +V++ G++++ GE + GRLG G   +V  P+ + ILS   V+ VA   G 
Sbjct: 3278 HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGG 3337

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H  A+T  G +++WG+G    G LGHG++++   P+ +   L    +  I+CG  H+A 
Sbjct: 3338 KHAMALTLDGKVFSWGEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAA 3394

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            +TS+G L+T+G G +G LGHGD+ +   P+ V  L   R  +V+CG      + +     
Sbjct: 3395 ITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCL----- 3449

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                   T  G +F+WGDGD G+LG G  E    P  V  L    + Q+ CG   S+ALT
Sbjct: 3450 -------TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALT 3502

Query: 486  TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             SG V+T G   Y +LG      +  PT + G   +  +  VA GA H  A+T + +VY 
Sbjct: 3503 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAVTDSGQVYA 3561

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            WG   +GQ G G+      P+LV  L    V RV CG
Sbjct: 3562 WGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3598



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 171/340 (50%), Gaps = 33/340 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H       +Q   L    V+    + VH+   G +HA+ +T
Sbjct: 3293 GKLYACGEG-TNGRLGLG-HNNNVPTPKQVPILSQYVVKK---VAVHS---GGKHAMALT 3344

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG    +  P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3345 LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTW 3404

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V+   D   +  ++CG     T  +T  G +F++GDG
Sbjct: 3405 GLGEY--GRLGHGDNCTQLKPKLVTALADH-RVVQVACGSRDAQTLCLTEEGLVFSWGDG 3461

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     SIP +VE L G+   ++ CG   + A+              T  G++
Sbjct: 3462 DFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLAL--------------TKSGEV 3507

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L  + +  VA G    +A+T SG VY  G   +
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567

Query: 499  GQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            GQ G    + +V   P+ V G +   FV  VACG+ H  A
Sbjct: 3568 GQQG--SGNTIVNKKPSLVLG-LDGIFVNRVACGSSHSVA 3604



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 21/308 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  VES   + +  +A   G +H + ++  GE+FSWGE   G+LGHG       P+LIE 
Sbjct: 4453 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA 4512

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            LSG+ V  +ACG  H+  +T  G + TWG G Y  G LGHG       P+ V   L G  
Sbjct: 4513 LSGIGVIDIACGSAHSACITSQGHVLTWGKGRY--GRLGHGDSEDQLQPKLVEALL-GYR 4569

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
               I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL  T+V C
Sbjct: 4570 AIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVEC 4629

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG+ +    P+ VA L  + 
Sbjct: 4630 GSQFSVAL--------------TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK 4675

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            I  +A G    VA +  G V+T G    GQLG      +   R+   +    + +V CG+
Sbjct: 4676 IISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGS 4735

Query: 531  YHVAALTS 538
             H  AL++
Sbjct: 4736 AHTLALST 4743



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 29/315 (9%)

Query: 174  AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
             E+ +  +   V+ +S G       S G+VF WGEG  +G LG G      S+ R     
Sbjct: 4456 VESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNRD---SYDR----- 4506

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
             PK +E+   + V +IACG+ H+  +T QG + +WG+   GRLGHG   D   P+L+E L
Sbjct: 4507 -PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEAL 4565

Query: 294  SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             G     +AC  G+  T  +T   ++++WGDG Y  G LG G    C +P K+  +L G+
Sbjct: 4566 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKVPMKIE-SLAGL 4622

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             ++ + CG   +  +T +G ++T+G G +  LGHG+      P++V  L+G +   ++ G
Sbjct: 4623 GVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4682

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
              H  A               +  G++FTWGD D+G+LG G       P  V  L  ++I
Sbjct: 4683 SLHCVAC--------------SDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHI 4728

Query: 472  CQVACGHDLSVALTT 486
             +V CG   ++AL+T
Sbjct: 4729 VKVICGSAHTLALST 4743



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 170/339 (50%), Gaps = 41/339 (12%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++  WG     +LG  + + V  P    +LS +    +A G      V++ G LY  G+G
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 3301

Query: 324  TYNSGLLGHGSKV---------SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            T     LGH + V         S ++ +KV+          +  G  H   +T  G +F+
Sbjct: 3302 TNGRLGLGHNNNVPTPKQVPILSQYVVKKVA----------VHSGGKHAMALTLDGKVFS 3351

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G+G  G LGHG+ ++   P+ +ETLR  R   ++CG  H+AA+              TS
Sbjct: 3352 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAI--------------TS 3397

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYT 492
             G+L+TWG G+ GRLGHGD   +L P+ V  L D  + QVACG     ++ LT  G V++
Sbjct: 3398 SGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFS 3457

Query: 493  MGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             G   +G+LG   ++G  +P +V+  +    V ++ CGA    ALT + +V+TWGKG   
Sbjct: 3458 WGDGDFGKLGRGGSEGCSIPHQVE-RLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYY 3516

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +LGHG   +   PT +  L+ K+V  V  G    A+ CL
Sbjct: 3517 RLGHGTDQHVRKPTPIQGLRGKKVIHVAVG----ALHCL 3551



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 159/322 (49%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            IF WG    G+LG    + +  P   E LS +    +A GE    AVT  G LY  G G 
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4438

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
                 +G    V+   P  V  +L  + +  ++   G  H   ++S G +F++G+G  G 
Sbjct: 4439 GGRLGIGGTDSVTT--PTLVE-SLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4495

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+  S   P+ +E L G+    ++CG  H+A +              TS G + TWG
Sbjct: 4496 LGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACI--------------TSQGHVLTWG 4541

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +T   +V++ G   YG+
Sbjct: 4542 KGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4601

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  VP +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG+ D
Sbjct: 4602 LGRGGSDGCKVPMKIE-SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4660

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4661 HVRRPKKVAALQGKKIISIATG 4682



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 121/245 (49%), Gaps = 16/245 (6%)

Query: 191  GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            GSAH     S G V  WG+G   G LG G+           D L PK VE+ +     +I
Sbjct: 4524 GSAHSACITSQGHVLTWGKG-RYGRLGHGDSE---------DQLQPKLVEALLGYRAIDI 4573

Query: 250  ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ACG+  A  + +T    ++SWG+   G+LG G       P  IE L+G+ V  V CG   
Sbjct: 4574 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQF 4633

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            + A+TRSG +YTWG G Y+   LGHG+      P+KV+  L G  +  I+ G  H    +
Sbjct: 4634 SVALTRSGSVYTWGKGDYHR--LGHGNTDHVRRPKKVAA-LQGKKIISIATGSLHCVACS 4690

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
              G +FT+GD   G LG G   +   PR V++L+G    +V CG  HT A+     S + 
Sbjct: 4691 DGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4750

Query: 428  SPSGS 432
             P  S
Sbjct: 4751 RPPPS 4755



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 142/278 (51%), Gaps = 20/278 (7%)

Query: 231 DALLPKAVESTMALDVHNIA--CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           D   PK +E   ++++  +A  C  RH + +T  G++FSWG   GGRLGHG  +    P 
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT 674

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR--KVSG 346
            I  L+   V  V CG  ++ A+T +G+LYTWG GTY  G LGHG+     +P   +V  
Sbjct: 675 RIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTY--GRLGHGNSEDKHLPTIVQVLK 732

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
               IH++ + CG  H+  VT  G ++ +GDG FG LG+G    +S+P  +E  +     
Sbjct: 733 QQRVIHVA-LGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQ----- 786

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
              C      AV V + S  S   G    G +++WG G  GRLGHG  E    P+ +  L
Sbjct: 787 ---CS---DGAVKVFSGSHFSVALGRD--GTVYSWGKGHGGRLGHGHSEHTASPKAIQAL 838

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             +NI  +A G    +ALT SG +Y  G   + QL  P
Sbjct: 839 EGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP 876



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 32/323 (9%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSG 295
           +E    + V  +AC      ++T  G++ S        L H      D + P+ IE L  
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLS--------LQHSNCHTPDTTAPKPIEGLES 627

Query: 296 VNVELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           VN+  +A  C   H  A+T +GD+++WG+G    G LGHG   S  IP ++   L    +
Sbjct: 628 VNIVQLAAHCEGRHVLALTATGDVFSWGNG--EGGRLGHGDTSSKDIPTRIVA-LAERQV 684

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS--CG 411
           + + CG  ++A +T+AG L+T+G G++G LGHG+     +P  V+ L+  R   V+  CG
Sbjct: 685 TGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCG 744

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLIDEN 470
             H+  V              T  G ++ WGDGD G+LG+G       P  +  P   + 
Sbjct: 745 DAHSLCV--------------TDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDG 790

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
             +V  G   SVAL   G VY+ G    G+LG   ++     +    +    + ++A G 
Sbjct: 791 AVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGL 850

Query: 531 YHVAALTSTSKVYTWGKGANGQL 553
            H  ALT++ ++Y WG+    QL
Sbjct: 851 AHCLALTASGELYGWGRNDFQQL 873



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 50/334 (14%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS--KVSCWIPRKVSGN 347
           IE+ +GV V  VAC E     +T +G + +          L H +        P+ + G 
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLS----------LQHSNCHTPDTTAPKPIEG- 624

Query: 348 LDGIHLSYIS--CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           L+ +++  ++  C   H   +T+ G +F++G+G  G LGHGD  S  IP  +  L   + 
Sbjct: 625 LESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQV 684

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
           T V CG  ++AA+              T+ G+L+TWG G  GRLGHG+ E +  P  V  
Sbjct: 685 TGVFCGSSYSAAI--------------TAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQV 730

Query: 466 LIDENICQVA--CGHDLSVALTTSGHVYTMGSAAYGQLG--------VPVADGLVPTRVD 515
           L  + +  VA  CG   S+ +T +G VY  G   +G+LG        VPVA  L P   D
Sbjct: 731 LKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIEL-PQCSD 789

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
           G +      +V  G++   AL     VY+WGKG  G+LGHG  ++  SP  +  L+ K +
Sbjct: 790 GAV------KVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNI 843

Query: 576 KRVVCG----LNFTAIICLHKWVSSVDHSVCSSC 605
             +  G    L  TA   L+ W  +    +C  C
Sbjct: 844 VDLAVGLAHCLALTASGELYGWGRNDFQQLCPPC 877



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            ++ WG    + G LG   GS++    P +    L  I    I+ G      VT  G L+ 
Sbjct: 4379 IFGWGHN--HRGQLGGLDGSRIKMPTPCEALSLLRPIQ---IAGGEQTLYAVTPDGKLYA 4433

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G G+ G LG G   S + P  VE+L+            H     VA +S        +S
Sbjct: 4434 TGYGAGGRLGIGGTDSVTTPTLVESLQ------------HVMIKKVAVNSGGKHCLALSS 4481

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G++F+WG+G+ G+LGHG+++    P+ +  L    +  +ACG   S  +T+ GHV T G
Sbjct: 4482 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4541

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    + ++ACG+       +T    V++WG G  G
Sbjct: 4542 KGRYGRLGHGDSEDQLQPKLVEALLGYRAI-DIACGSGDAQTLCITDDDNVWSWGDGDYG 4600

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4601 KLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVAL 4637



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 56/325 (17%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDVF WG G       GG  R+G+  +   D  +P  + +     V  + CG+ ++  +T
Sbjct: 649 GDVFSWGNG------EGG--RLGHGDTSSKD--IPTRIVALAERQVTGVFCGSSYSAAIT 698

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA--CGEYHTCAVTRSGDLY 318
             GE+++WG  + GRLGHG   D   P ++++L    V  VA  CG+ H+  VT +G +Y
Sbjct: 699 AAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758

Query: 319 TWGDGTYNSGLLGHGS------KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
            WGDG +  G LG+G+       V+  +P+   G +     S+ S  L     V S    
Sbjct: 759 AWGDGDF--GKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYS---- 812

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           +  G G     GH +H  T+ P+ ++ L G     ++ G+ H  A+              
Sbjct: 813 WGKGHGGRLGHGHSEH--TASPKAIQALEGKNIVDLAVGLAHCLAL-------------- 856

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA--PLIDENICQVACGHDLSVALTTSGHV 490
           T+ G+L+ WG  D           +L P CV   P++   I  +     L +A   +G  
Sbjct: 857 TASGELYGWGRNDF---------QQLCPPCVTRDPIVLLPI--LTTPPTLRIAGMAAGGA 905

Query: 491 YTMGSAAYGQLGVPVADGLVPTRVD 515
            ++       LG+PV    +P  VD
Sbjct: 906 QSIVWCHSSTLGIPVK---IPFVVD 927



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            A  +F +G    G LG  D     +P   E L  LR  +++ G     AV          
Sbjct: 4376 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAV---------- 4425

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T  GKL+  G G  GRLG G  +    P  V  L    I +VA   G    +AL++
Sbjct: 4426 ----TPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS 4481

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G V++ G    G+LG    D     ++   ++   V ++ACG+ H A +TS   V TWG
Sbjct: 4482 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4541

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4542 KGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCI 4585


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 195/382 (51%), Gaps = 38/382 (9%)

Query: 204  FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD-VHNIACGARHAVLVTKQ 262
            ++WG G+ +G LG     +  +  R     LP+ +E   A D +  I  G     L +  
Sbjct: 1386 YVWG-GVRHGQLG-----LNMNVGRH--CALPRRLE---AFDNMQTIELGLNCTFLCSAS 1434

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYT 319
            G + S GE S GRLGHG   D+S P L+  L G  V  ++     + HT A+T SG+L+T
Sbjct: 1435 GAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFT 1494

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            WGDG Y  G LGHG+      PR V   L G  +    CG  HTAVVT+ G+L+TFG G 
Sbjct: 1495 WGDGDY--GKLGHGNSERQRRPRLVE-TLVGETVVDGCCGYKHTAVVTATGYLYTFGYGD 1551

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +G LGHG+  S   P  V   + + +  VSCG+ HT A+         S  G T    ++
Sbjct: 1552 YGRLGHGNTTSKKTPTLVHDCQNIAS--VSCGLNHTLAL---------SRDGMT----VW 1596

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
             +GDGD G+LG G+      P  +A L +  I  V CGH  SV L  +G VY  G  A+ 
Sbjct: 1597 AFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFN 1656

Query: 500  QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             +G P    ++PT++  E     V +++CGA +  AL     V++WG  ++GQ+G G  +
Sbjct: 1657 GIGGP-GQTVIPTKL--ETINKRVFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFN 1713

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
              + P L   L   ++K+V  G
Sbjct: 1714 KVHEPLLT--LTGHRIKQVRAG 1733



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 29/281 (10%)

Query: 318  YTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            Y WG   +  G LG    V   C +PR++    D  ++  I  GL  T + +++G + + 
Sbjct: 1386 YVWGGVRH--GQLGLNMNVGRHCALPRRLEA-FD--NMQTIELGLNCTFLCSASGAVTST 1440

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW---HTAAVVVATDSSSSSPSGS 432
            G+GS+G LGHG+    S+P  V  L+G   T +S  V    HT A+              
Sbjct: 1441 GEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAI-------------- 1486

Query: 433  TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            T  G+LFTWGDGD G+LGHG+ E +  P  V  L+ E +    CG+  +  +T +G++YT
Sbjct: 1487 TESGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYT 1546

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGKGAN 550
             G   YG+LG         PT V        +  V+CG  H  AL+     V+ +G G  
Sbjct: 1547 FGYGDYGRLGHGNTTSKKTPTLVHD---CQNIASVSCGLNHTLALSRDGMTVWAFGDGDF 1603

Query: 551  GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            G+LG G+     SP  +  L++  +K V CG  ++  + ++
Sbjct: 1604 GKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAIN 1644



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            GDV++ G+   NG  G G+             ++P  +E T+   V  I+CGA + + + 
Sbjct: 1645 GDVYVCGQDAFNGIGGPGQ------------TVIPTKLE-TINKRVFQISCGAEYTLALD 1691

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            + G ++SWG  S G++G G    V  P L   L+G  ++ V  G+ H+ A T
Sbjct: 1692 EDGNVWSWGNNSDGQVGCGHFNKVHEPLL--TLTGHRIKQVRAGKTHSIAWT 1741


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 193/384 (50%), Gaps = 29/384 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +  WG     G LGG E              LP   E+  AL    +  G +    VT
Sbjct: 581 GTILGWGHN-HRGQLGGVE---------GAKVKLPMPCEALSALRPIQVVGGEQTLFAVT 630

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE--LVACGEYHTCAVTRSGDLY 318
             G++++ G  +GGRLG G    VS P L+E L  V ++  +V  G  H  A++  G++Y
Sbjct: 631 ADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVY 690

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WG+G  + G LGHG+K SC  PR +  +L G  +  ++CG  H+A +T++G L+T+G G
Sbjct: 691 SWGEG--DDGKLGHGNKSSCERPRVIE-SLRGKEVVDVACGGAHSACITASGELYTWGKG 747

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LGHGD      P++VE L G R   V+CG      + V  D              +
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDC------------V 795

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WGDGD G+LG G  +    P  V  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 796 WSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDY 855

Query: 499 GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +LG    D +  P RV     +  +  +A G+ H  A T T +VYTWG    GQLG G 
Sbjct: 856 HRLGHGTDDHVRRPKRVAALQGKKVI-CIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGT 914

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
            +  + P LV  L+ K++ RV CG
Sbjct: 915 VNAIHKPRLVAALQGKKINRVSCG 938



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 34/363 (9%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +    G +H + ++ +GE++SWGE   G+LGHG ++    P++IE 
Sbjct: 657 PTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIES 716

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G  V  VACG  H+  +T SG+LYTWG G Y  G LGHG       P+KV   L G  
Sbjct: 717 LRGKEVVDVACGGAHSACITASGELYTWGKGRY--GRLGHGDSDDQLRPKKVEA-LSGWR 773

Query: 353 LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  ++CG     T  VT    ++++GDG +G LG G      +P  V+ L+G+   RV C
Sbjct: 774 VRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVEC 833

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T+ G ++TWG GD  RLGHG  +    P+ VA L  + 
Sbjct: 834 GSQFSVAL--------------TASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKK 879

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    VA T +G VYT G    GQLG    + +   R+   +    +  V+CG+
Sbjct: 880 VICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGS 939

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV----KRVVCGLNFTA 586
            H  A ++ +       GA G++          P   D L+D  +     R     +F+ 
Sbjct: 940 AHTVAWSTCNPSTA---GACGRMPPA------VPLEYDLLRDIPIPTLRNRYALLYHFSE 990

Query: 587 IIC 589
           + C
Sbjct: 991 LFC 993



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 35/353 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G          ++    P+ +ES    +V ++ACG  H+  +T
Sbjct: 687  GEVYSWGEG-DDGKLGHGN---------KSSCERPRVIESLRGKEVVDVACGGAHSACIT 736

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG+   GRLGHG   D   P+ +E LSG  V  VACG  +  T  VT    ++
Sbjct: 737  ASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVW 796

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P +V   L G+ +  + CG   +  +T++G ++T+G G
Sbjct: 797  SWGDGDY--GKLGRGGSDGCKVPLRVD-LLQGMGVIRVECGSQFSVALTASGSVYTWGKG 853

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +  LGHG       P+ V  L+G +   ++ G  H  A               T  G++
Sbjct: 854  DYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVAC--------------TDTGEV 899

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWGD D+G+LG G       P  VA L  + I +V+CG   +VA +T  +  T G+   
Sbjct: 900  YTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWSTC-NPSTAGACGR 958

Query: 499  GQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
                VP+   L     +PT  +         E+ C +  +  L+ +S++   G
Sbjct: 959  MPPAVPLEYDLLRDIPIPTLRNRYALLYHFSELFCPSLSMFDLSGSSEIQQEG 1011



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 146/333 (43%), Gaps = 34/333 (10%)

Query: 314 SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           SG +  WG    + G LG   G+KV   +P +    L  I    +  G      VT+ G 
Sbjct: 580 SGTILGWGHN--HRGQLGGVEGAKVKLPMPCEALSALRPIQ---VVGGEQTLFAVTADGK 634

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++  G G+ G LG G   S S P  +E+L+            H     V  +S       
Sbjct: 635 VYATGYGAGGRLGIGGTDSVSCPTLLESLQ------------HVFIKKVVVNSGGKHCLA 682

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            ++ G++++WG+GD G+LGHG+K     P  +  L  + +  VACG   S  +T SG +Y
Sbjct: 683 LSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELY 742

Query: 492 TMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSK--VYTWGKG 548
           T G   YG+LG   +D  L P +V+  ++   V  VACG+     L  T    V++WG G
Sbjct: 743 TWGKGRYGRLGHGDSDDQLRPKKVEA-LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDG 801

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW----VSSVDHS 600
             G+LG G  D    P  VD L+   V RV CG  F+  +     ++ W       + H 
Sbjct: 802 DYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHG 861

Query: 601 VCSSCHNP---FGFRRKRHNCYNCGLVFCKACS 630
                  P      + K+  C   G + C AC+
Sbjct: 862 TDDHVRRPKRVAALQGKKVICIAVGSLHCVACT 894


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 140/427 (32%), Positives = 207/427 (48%), Gaps = 38/427 (8%)

Query: 159  LTNA-FPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
            L NA F    ND  SAAE       S  +SS++       +    V +WG       L  
Sbjct: 2872 LQNASFLATEND--SAAE------PSYSTSSNYADEQSSNEISSKVLVWG-------LND 2916

Query: 218  GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
             E   G   S+     LP        L   +I+ G++   +V++ G++++ GE + GRLG
Sbjct: 2917 KEQLGGLKGSK---VKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLG 2973

Query: 278  HGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
             G   +V  P+ + IL+   V+ VA   G  H  A+T  G +++WG+G    G LGHG++
Sbjct: 2974 LGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHGNR 3031

Query: 336  VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
            V+   P K+  +L    +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+
Sbjct: 3032 VTLEKP-KLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3090

Query: 396  EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
             V  L+G R  +V+CG      + +            T  G +F+WGDGD G+LG G  E
Sbjct: 3091 LVTALQGHRVVQVACGSRDAQTLCL------------TEEGLVFSWGDGDFGKLGRGGSE 3138

Query: 456  PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRV 514
                P  V  L    + Q+ CG   S+ALT  G V+T G   Y +LG      +  PT +
Sbjct: 3139 GCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPI 3198

Query: 515  DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ 574
             G   +  +  VA GA H  A+T + +V+ WG   +GQ G G+      P LV  L    
Sbjct: 3199 QGLRGKKVIH-VAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVF 3257

Query: 575  VKRVVCG 581
            V RV CG
Sbjct: 3258 VNRVACG 3264



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 171/340 (50%), Gaps = 33/340 (9%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++  GEG  NG LG G H       RQ   L    V+    + VH+   G +HA+ +T
Sbjct: 2959 GKLYACGEG-TNGRLGLG-HNNNVPTPRQVPILNQYVVKK---VAVHS---GGKHAMALT 3010

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGHG    +  P+L+E L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3011 LDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTW 3070

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3071 GLGEY--GRLGHGDNCTQLKPKLVTA-LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3127

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     S+P +VE L G+   ++ CG   + A+              T  G++
Sbjct: 3128 DFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLAL--------------TKIGEV 3173

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG GD  RLGHG  +    P  +  L  + +  VA G    +A+T SG V+  G   +
Sbjct: 3174 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDH 3233

Query: 499  GQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            GQ G    + +V   P  V G +   FV  VACG+ H  A
Sbjct: 3234 GQQG--SGNTVVNKKPNLVLG-LDGVFVNRVACGSSHSVA 3270



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 167/331 (50%), Gaps = 25/331 (7%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++  WG     +LG  + + V  P    +LS +    ++ G      V++ G LY  G+G
Sbjct: 2908 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEG 2967

Query: 324  TYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T     LGH + V    PR+V   N   +    +  G  H   +T  G +F++G+G  G 
Sbjct: 2968 TNGRLGLGHNNNVPT--PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3025

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ ++   P+ +E+LR  R   ++CG  H+AA+              TS G+L+TWG
Sbjct: 3026 LGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAI--------------TSSGELYTWG 3071

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G+ GRLGHGD   +L P+ V  L    + QVACG     ++ LT  G V++ G   +G+
Sbjct: 3072 LGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3131

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   ++G  VP +V+  +    V ++ CGA    ALT   +V+TWGKG   +LGHG   
Sbjct: 3132 LGRGGSEGCSVPHQVE-RLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQ 3190

Query: 560  NRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +   PT +  L+ K+V  V  G    A+ CL
Sbjct: 3191 HVRKPTPIQGLRGKKVIHVAVG----ALHCL 3217



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 162/361 (44%), Gaps = 54/361 (14%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  VES   + +  +A   G +H + ++  GE+FSWGE   G+LGHG       P+LIE 
Sbjct: 4020 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA 4079

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            LSG+ V  +ACG  H+  +T  G + TWG G Y  G LGHG       P++       + 
Sbjct: 4080 LSGIGVVDIACGSAHSACITSQGHVLTWGKGRY--GRLGHGDSEDQLQPKRC------VL 4131

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
             + I CG+  TA++ S       G  S              P ++E+L GL   +V CG 
Sbjct: 4132 RTTIMCGVGVTAIMASLAEEVPMGARS--------------PMKIESLAGLGVIKVECGS 4177

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
              + A+              T  G ++TWG GD  RLGHG+ +    P+ VA L  + I 
Sbjct: 4178 QFSVAL--------------TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII 4223

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
             +A G    VA + SG V+T G    GQLG      +   R+   +    + +V CG+ H
Sbjct: 4224 SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAH 4283

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFTAII 588
              AL++             QL    +   + P   D ++D   +    R+V   +F+ +I
Sbjct: 4284 TLALSTY------------QLSEAVRPPPSPPLEYDLVRDIAPEVLHARLVLLHHFSELI 4331

Query: 589  C 589
            C
Sbjct: 4332 C 4332



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 138/275 (50%), Gaps = 25/275 (9%)

Query: 231 DALLPKAVESTMALDVHNIA--CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + + PK VE    + V  IA  C  RHA+ ++  GE++SWG   GGRLGHG  A    P 
Sbjct: 564 ETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPT 623

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            I +   V    +  G  ++ AV+  G+L+TWG GTY  G LGHG+    ++P +V   L
Sbjct: 624 KIALEKQVTA--IYAGASYSAAVSSVGELFTWGRGTY--GRLGHGNSDDKFVPTQVQA-L 678

Query: 349 DGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
               +  ++ G    H+  VT  G LF +GDG FG LG+G    + +P ++E +  +   
Sbjct: 679 KAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSV--A 736

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           R+  G   + A+              +  G L++WG G  GRLGHG+ E    P+ V  L
Sbjct: 737 RIYSGSQFSVAL--------------SYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHAL 782

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
             + I  VA G    +ALT+SG +Y  G   Y Q+
Sbjct: 783 EGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQI 817



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 156/352 (44%), Gaps = 52/352 (14%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            IF WG    G+LG    + +  P   E LS +    +A GE    AVT  G LY  G G 
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4005

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
                 +G    VS   P  V  +L  + +  ++   G  H   ++S G +F++G+G  G 
Sbjct: 4006 GGRLGIGGTDSVST--PTLVE-SLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+  S   P+ +E L G+    ++CG  H+A +              TS G + TWG
Sbjct: 4063 LGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACI--------------TSQGHVLTWG 4108

Query: 443  DGDKGRLGHGDKEPRLFPE-CV---------------APLIDE----------------- 469
             G  GRLGHGD E +L P+ CV               A L +E                 
Sbjct: 4109 KGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGL 4168

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             + +V CG   SVALT SG VYT G   Y +LG    D +   +    +    +  +A G
Sbjct: 4169 GVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4228

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + H  A + + +V+TWG    GQLG G       P LV  L+ K + +V+CG
Sbjct: 4229 SLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICG 4280



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 32/319 (10%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +E   +L V  +AC      +VT  G+++S          H   A+   P+L+E L GV+
Sbjct: 528 IELPPSLQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVS 578

Query: 298 VELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           V  +A  C   H  A++ +G++Y+WG G    G LGHG   S  +P K++       ++ 
Sbjct: 579 VIQIAAHCEGRHAMALSSAGEVYSWGAG--EGGRLGHGDTASKEVPTKIALEK---QVTA 633

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I  G  ++A V+S G LFT+G G++G LGHG+     +P +V+ L+  +   V+ G    
Sbjct: 634 IYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALG---- 689

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
                   S  +     T  G LF WGDGD G+LG+G       P  +  +   ++ ++ 
Sbjct: 690 --------SGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV--SSVARIY 739

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVA 534
            G   SVAL+  G +Y+ G    G+LG   ++   VP  V     +  V +VA G+ H  
Sbjct: 740 SGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIV-DVAVGSAHCL 798

Query: 535 ALTSTSKVYTWGKGANGQL 553
           ALTS+ ++Y WG+    Q+
Sbjct: 799 ALTSSGELYGWGRNDYQQI 817



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 40/324 (12%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE+   + V  VAC E     VT SG LY+            H S      P+ V G L+
Sbjct: 528 IELPPSLQVRQVACTENSIYIVTTSGQLYSI-----------HSSCAETVAPKLVEG-LE 575

Query: 350 GIHLSYIS--CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           G+ +  I+  C   H   ++SAG ++++G G  G LGHGD  S  +P ++   +  + T 
Sbjct: 576 GVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEK--QVTA 633

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           +  G  ++AAV              +S G+LFTWG G  GRLGHG+ + +  P  V  L 
Sbjct: 634 IYAGASYSAAV--------------SSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALK 679

Query: 468 DENICQVACGHD--LSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVE 524
              +  VA G     S+A+T  G ++  G   +G+LG    +G  +P +++G    S V 
Sbjct: 680 AYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV---SSVA 736

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG--- 581
            +  G+    AL+    +Y+WGKG  G+LGHG+ ++ N P LV  L+ K++  V  G   
Sbjct: 737 RIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAH 796

Query: 582 -LNFTAIICLHKWVSSVDHSVCSS 604
            L  T+   L+ W  +    +C S
Sbjct: 797 CLALTSSGELYGWGRNDYQQICPS 820



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 125/265 (47%), Gaps = 46/265 (17%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WGEG  +G LG G      S+ R      PK +E+   + V +IACG+ H+  +T
Sbjct: 4050 GEVFSWGEG-EDGKLGHGNRD---SYDR------PKLIEALSGIGVVDIACGSAHSACIT 4099

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQL------------------------------- 289
             QG + +WG+   GRLGHG   D   P+                                
Sbjct: 4100 SQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSP 4159

Query: 290  --IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
              IE L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      P+KV+  
Sbjct: 4160 MKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHR--LGHGNTDHVRRPKKVAA- 4216

Query: 348  LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
            L G  +  I+ G  H    + +G +FT+GD   G LG G   +   PR V++L+G    +
Sbjct: 4217 LQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVK 4276

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGS 432
            V CG  HT A+     S +  P  S
Sbjct: 4277 VICGSAHTLALSTYQLSEAVRPPPS 4301



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 18/215 (8%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           D +S     +I+L   V++   G+++     S+G++F WG G   G LG G         
Sbjct: 615 DTASKEVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGRG-TYGRLGHG--------- 664

Query: 228 RQTDALLPKAVESTMALDVHNIACGA--RHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
              D  +P  V++  A  V ++A G+   H++ VT  G +F+WG+   G+LG+G      
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSP 724

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  IE +S  +V  +  G   + A++  G LY+WG G  + G LGHG+     +P+ V 
Sbjct: 725 LPVQIEGVS--SVARIYSGSQFSVALSYDGTLYSWGKG--HGGRLGHGNSEHSNVPKLVH 780

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             L+G  +  ++ G  H   +TS+G L+ +G   +
Sbjct: 781 A-LEGKKIVDVAVGSAHCLALTSSGELYGWGRNDY 814



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 20/166 (12%)

Query: 166 NSNDR-----SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH 220
           NS+D+       A + +++   ++ S  +H  A  D    G +F WG+G   G LG G  
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDG---GLLFAWGDG-DFGKLGNGSC 720

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
                      + LP  +E   +  V  I  G++ +V ++  G ++SWG+  GGRLGHG 
Sbjct: 721 ---------NGSPLPVQIEGVSS--VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN 769

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN 326
               + P+L+  L G  +  VA G  H  A+T SG+LY WG   Y 
Sbjct: 770 SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQ 815



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 4/154 (2%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F WG   +G+LG  D      P     L      Q+A G     A+T  G +Y  G  A
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4005

Query: 498  YGQLGVPVADGL-VPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLG 554
             G+LG+   D +  PT V+  +    +++VA   G  H  AL+S  +V++WG+G +G+LG
Sbjct: 4006 GGRLGIGGTDSVSTPTLVES-LQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            HG++D+ + P L++ L    V  + CG   +A I
Sbjct: 4065 HGNRDSYDRPKLIEALSGIGVVDIACGSAHSACI 4098



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 25/224 (11%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            A  +F +G    G LG  D     +P   E L  LR  +++ G     AV          
Sbjct: 3943 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAV---------- 3992

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T  GKL+  G G  GRLG G  +    P  V  L    I +VA   G    +AL++
Sbjct: 3993 ----TPDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSS 4048

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G V++ G    G+LG    D     ++   ++   V ++ACG+ H A +TS   V TWG
Sbjct: 4049 DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWG 4108

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKR--VVCGLNFTAII 588
            KG  G+LGHGD +++  P        + V R  ++CG+  TAI+
Sbjct: 4109 KGRYGRLGHGDSEDQLQP-------KRCVLRTTIMCGVGVTAIM 4145


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 210/427 (49%), Gaps = 50/427 (11%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3012

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3013 AEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKV 3072

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3073 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 3129

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG--- 494
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T     
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTK 3237

Query: 495  ---SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY---HVAALTSTSKVYTWGKG 548
               +  +      +   L+   V   +   ++    C  Y   ++  +  + KVY WG  
Sbjct: 3238 HCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLX--TCATYFKLNIIKIVISKKVYAWGDN 3295

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNP 608
             +GQ G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H P
Sbjct: 3296 DHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEP 3348

Query: 609  FGFRRKR 615
              F+  R
Sbjct: 3349 VLFQTAR 3355



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3965 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4014

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 4015 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L G  +  I+ G  H+A +T+AG L+T+G G
Sbjct: 4075 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDIAAGGAHSACITAAGELYTWGKG 4131

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4132 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 4179

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4180 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDY 4239

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4240 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4298

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 4299 TNAIQRPRLVAALQGKKINRVACG 4322



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4100

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G  V  +A G  H+  +T +G+LYTWG G Y  G LGHG       P+ V   L G  
Sbjct: 4101 LRGTEVVDIAAGGAHSACITAAGELYTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4157

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L G+  T+V C
Sbjct: 4158 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVEC 4217

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4218 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4263

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 4264 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 4323

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 4324 AHTLAW-STSKPANAGK 4339



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 178/354 (50%), Gaps = 33/354 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E+   L V  +AC  +  +++++ G++++               +   PQL++ L+
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYT----------QAYNNNTLGPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A      H  A++ + +L++WG G  + G LGHG  VS   P+ VS   G   
Sbjct: 492 SRNIVKIAAHPDGQHYLALSATSELFSWGCG--DGGRLGHGDTVSLEEPKLVSALSGKQT 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  + +I+CG  ++A +T+ G L+T+G G++G LGHG     ++P  V  L+GL+   VS
Sbjct: 550 GKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVS 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CG------------SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
           +I +V CG   S+A+T  G VY+ G     +LG    + +   ++   +    V +VA G
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVG 717

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           + H  ALT + +VY+W  G+N Q  H D  +  +  P+++  L  K +  + CG
Sbjct: 718 STHCLALTESGEVYSW--GSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 146/280 (52%), Gaps = 25/280 (8%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           Y+ +   + L P+ V+   + ++  IA     +H + ++   E+FSWG   GGRLGHG  
Sbjct: 473 YTQAYNNNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDT 532

Query: 282 ADVSHPQLIEILSGVN----VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
             +  P+L+  LSG      V  +ACG  ++ A+T  G+LYTWG G Y  G LGHGS   
Sbjct: 533 VSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNY--GRLGHGSSED 590

Query: 338 CWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
             +P  V+G L G+ +  +SCG     T  VT  G ++++GDG +G LG G       P+
Sbjct: 591 QTVPMLVTG-LKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
            +E L+ L   +V CG   + A+              T  G++++WG GD  RLGHG +E
Sbjct: 650 LIEKLQDLDIVKVRCGSQFSIAI--------------TKDGQVYSWGKGDNQRLGHGTEE 695

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
              +P+ +  L  + +  VA G    +ALT SG VY+ GS
Sbjct: 696 HVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGS 735



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ +ES    
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVIESLRGT 4104

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  GE+++WG+   GRLGHG   D   P+L+E L G  V  +AC 
Sbjct: 4105 EVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4164

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ ++ + CG   
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGVGVTKVECGSQF 4221

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 4222 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 4277

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 4278 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327

Query: 483  ALTTS 487
            A +TS
Sbjct: 4328 AWSTS 4332



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 168/327 (51%), Gaps = 42/327 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+ SWG      LG    A+VS P   E L+ + V  VAC E     ++R+G LYT    
Sbjct: 424 EVISWG-----LLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YN+  LG    V     R   K++ + DG H  Y++        +++   LF++G G  
Sbjct: 476 AYNNNTLGP-QLVQGLASRNIVKIAAHPDGQH--YLA--------LSATSELFSWGCGDG 524

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +S   P+ V  L G +T +    ++CG  ++AA+              T+ G
Sbjct: 525 GRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAI--------------TADG 570

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++++T +G V++ G
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWG 630

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    A+T   +VY+WGKG N +LG
Sbjct: 631 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLG 690

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           HG +++   P +++ L+ K+V  V  G
Sbjct: 691 HGTEEHVRYPKIMNGLQGKKVVDVAVG 717



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 22/291 (7%)

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T + ++F WG     +LG  + + +  P   E LS +NV  VA G     AVT  G +Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019

Query: 320  WGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDG-IHLSYISCGLWHTAVVTSAGHLFTFGD 377
             G+ T  +G LG G S  +  IPR+++   +  +    +  G  H   +T  G +F++G+
Sbjct: 3020 CGEAT--NGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGE 3077

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G  G LGH   ++   PR +E L+  R   ++CG  H+AA+              TS G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI--------------TSSGE 3123

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGS 495
            L+TWG G+ GRLGHGD   +L P+ V  L+   + QVACG     ++ALT  G V++ G 
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3183

Query: 496  AAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
              +G+LG   ++G  +P  ++  +    V ++ CGA    ALT +  V+TW
Sbjct: 3184 GDFGKLGRGGSEGCNIPQNIE-RLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 144/333 (43%), Gaps = 57/333 (17%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSNYVVKKVA---VHS---GGRHATALT 3067

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCG------------VW------HTAAV-- 418
             FG LG G     +IP+ +E L G    ++ CG            VW      H  AV  
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXF 3244

Query: 419  ---------VVATDSSSSSPSGS--TSCGKLF--------------TWGDGDKGRLGHGD 453
                      +   S      G    +C   F               WGD D G+ G+G 
Sbjct: 3245 YYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGT 3304

Query: 454  KEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                  P  V  L  + I +VACG   SVA TT
Sbjct: 3305 TTVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3337



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 126/251 (50%), Gaps = 17/251 (6%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
            DR    E+ R +   VV  ++ G+      + G+++ WG+G   G LG G+         
Sbjct: 4093 DRPRVIESLRGT--EVVDIAAGGAHSACITAAGELYTWGKG-RYGRLGHGDSE------- 4142

Query: 229  QTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G       
Sbjct: 4143 --DQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4200

Query: 287  PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            P  I+ L+GV V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V G
Sbjct: 4201 PMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG 4258

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
             L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G +  
Sbjct: 4259 -LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN 4317

Query: 407  RVSCGVWHTAA 417
            RV+CG  HT A
Sbjct: 4318 RVACGSAHTLA 4328



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 25/301 (8%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++   G  +    +  ++F WG G   G LG G+     + S +   L+          
Sbjct: 498 IAAHPDGQHYLALSATSELFSWGCG-DGGRLGHGD-----TVSLEEPKLVSALSGKQTGK 551

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T  GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 552 QVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCG 611

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T +VT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 612 SGDAQTLSVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 668

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +  L+G +   V+ G  H  A+    
Sbjct: 669 SIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLAL---- 724

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G++++WG  D+ +     +  +  P  +  L  ++I  ++CG   S 
Sbjct: 725 ----------TESGEVYSWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSF 774

Query: 483 A 483
           A
Sbjct: 775 A 775



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 112/247 (45%), Gaps = 38/247 (15%)

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSC-----------GVWHTAA---------- 417
           S+G LG   + + S P + E L  L  T+V+C           G  +T A          
Sbjct: 427 SWGLLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLGPQL 486

Query: 418 ---------VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD----KEPRLFPECVA 464
                    V +A           ++  +LF+WG GD GRLGHGD    +EP+L      
Sbjct: 487 VQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSG 546

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFV 523
               + +  +ACG   S A+T  G +YT G   YG+LG   + D  VP  V G      V
Sbjct: 547 KQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVV 606

Query: 524 EEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           + V+CG+      ++T   +V++WG G  G+LG G  D   +P L++ L+D  + +V CG
Sbjct: 607 D-VSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCG 665

Query: 582 LNFTAII 588
             F+  I
Sbjct: 666 SQFSIAI 672



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 15/168 (8%)

Query: 437  KLFTWGDGDKGRLGHGDKEPRL----FPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            K+F WG  DK +LG G K  ++    F E ++ L   N+ QVA G     A+T  G VY 
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSAL---NVVQVAGGSKSLFAVTAEGKVYA 3019

Query: 493  MGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGA 549
             G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G 
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3079

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 4013

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 4014 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 4069

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +  + V ++A G  H A +T+  ++YTWG
Sbjct: 4070 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWG 4129

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4130 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4173


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 182/382 (47%), Gaps = 35/382 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            + F+WG G       GG             A +P  V S        I CG     +V  
Sbjct: 1802 EAFLWGSGRNGQMCEGGR-----------GAFVPVRVPSFSC--SQQIVCGQNCTFVVQN 1848

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+     I  + G  V  +A     + HT AVT SG+++
Sbjct: 1849 NGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVF 1908

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  +SCG  H+AVVT+ G LFTFG+G
Sbjct: 1909 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQLSCGFKHSAVVTADGKLFTFGNG 1965

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G   +  +P  V  L   +   V+CG+ HT  + V+ D ++           +
Sbjct: 1966 DYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHT--LCVSADGTN-----------V 2012

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA-A 497
            + +GDGD G+LG G+   +  P  +  L    I +VACG   SVAL+  G V+T G    
Sbjct: 2013 WAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERL 2072

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             GQ          P  V   ++  F+E+V CGA H   LTS   V+ WG  + GQLG G 
Sbjct: 2073 IGQPDTRGGSNCQPQEV-ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGH 2131

Query: 558  KDNR-NSPTLVDFLKDKQVKRV 578
             ++    P LV  L  K +++V
Sbjct: 2132 TNSPVREPQLVPCLTGKNIRQV 2153



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 35/309 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGAR---HAV 257
            G V   GEG + G LG G     +S +         A+ S     V  +A       H +
Sbjct: 1850 GTVLACGEG-SYGRLGQGNSDDLHSLT---------AISSIQGFVVTQLATSVGSDGHTL 1899

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
             VT+ GE+FSWG+   G+LGHG       P+ IE L G  V  ++CG  H+  VT  G L
Sbjct: 1900 AVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKL 1959

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG-HLFTFG 376
            +T+G+G Y  G LG G+  +  +P +V   L+   + Y++CGL HT  V++ G +++ FG
Sbjct: 1960 FTFGNGDY--GRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSADGTNVWAFG 2016

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG FG LG G+ +   +P +++ L+G    +V+CG   + A+              +  G
Sbjct: 2017 DGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL--------------SKYG 2062

Query: 437  KLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            K+FTW  G +  +G  D        P+ VA L    I  V CG + ++ LT+ G V+  G
Sbjct: 2063 KVFTW--GQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWG 2120

Query: 495  SAAYGQLGV 503
            S + GQLG+
Sbjct: 2121 SNSEGQLGL 2129



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 14/235 (5%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            I CG   T VV + G +   G+GS+G LG G+         + +++G   T+++  V   
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
               +  T+S           G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q++
Sbjct: 1896 GHTLAVTES-----------GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLS 1944

Query: 476  CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            CG   S  +T  G ++T G+  YG+LG+    +  VPTRV   +    +  VACG  H  
Sbjct: 1945 CGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTL 2003

Query: 535  ALTST-SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++  + V+ +G G  G+LG G+   ++ PT +  L+   +K+V CG  F+  +
Sbjct: 2004 CVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL 2058



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 11/102 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WG+          E  +G   +R      P+ V S     + ++ CGA H +++T
Sbjct: 2062 GKVFTWGQ----------ERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLT 2111

Query: 261  KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELV 301
              G+++ WG  S G+LG G   + V  PQL+  L+G N+  V
Sbjct: 2112 SDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKNIRQV 2153


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 39/347 (11%)

Query: 201 GDVFIWGEG-IAN---GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           GDV++WG G + N     LG G            D LLP  VES    +V  ++ G  H+
Sbjct: 643 GDVYMWGRGSVKNPPLSTLGNGSLE---------DQLLPTKVESLS--EVVLVSIGYYHS 691

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             +   GE+ +WG    G+LGHG   + + P++++ ++   V  V CGE HT  +T++G 
Sbjct: 692 AALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGK 751

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++TWG   Y  G LG G       P  V+ +L+  ++  I+CG  H AV+T+A  +  FG
Sbjct: 752 VFTWGTSEY--GQLGLGDTQKNCTPMLVT-SLEKYNIIQIACGSTHCAVLTNAREVLVFG 808

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +G+  A+G  + IS  +P  V  L+ L   R+SCG + TAA+              T CG
Sbjct: 809 NGA--AMGSANIIS--VPMMVPALKHLNIERLSCGHYSTAAL--------------TECG 850

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            ++TWG G +  LGHG  +  L P+ V  L  ++I Q++CG      LT SG +YT G  
Sbjct: 851 DVYTWGSGQE--LGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKD 908

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            +GQLG    D   P ++D  +  +F+  V+CG  H A+L  T++ +
Sbjct: 909 PFGQLGHAQGDQNKPKKIDSLLKTTFI-SVSCGENHNASLFDTTRSF 954



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 177/388 (45%), Gaps = 74/388 (19%)

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           +R A  +  Q  I +WG  S  +LG    GRE   + P+ +   +   +  ++CG Y++ 
Sbjct: 578 SRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSA 637

Query: 310 AVTRSGDLYTWGDGTYNS---GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           A+T +GD+Y WG G+  +     LG+GS     +P KV  +L  + L  +S G +H+A +
Sbjct: 638 ALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVE-SLSEVVL--VSIGYYHSAAL 694

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            S G L T+G G  G LGHGD ++ +IP+ V+T+     T+V CG  HT  +        
Sbjct: 695 KSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICL-------- 746

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--------- 477
                 T  GK+FTWG  + G+LG GD +    P  V  L   NI Q+ACG         
Sbjct: 747 ------TKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTN 800

Query: 478 ---------------------------------------HDLSVALTTSGHVYTMGSAAY 498
                                                  H  + ALT  G VYT GS   
Sbjct: 801 AREVLVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE 860

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
              G   ++ L P  VDG  ++S + +++CG  H+A LT + K+YT GK   GQLGH   
Sbjct: 861 LGHGTNQSE-LHPKLVDGLRSQS-IRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQG 918

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           D +N P  +D L       V CG N  A
Sbjct: 919 D-QNKPKKIDSLLKTTFISVSCGENHNA 945



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 146/307 (47%), Gaps = 38/307 (12%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           SLS VV  S          S G++  WG G  +G LG G+         QT   +PK V+
Sbjct: 677 SLSEVVLVSIGYYHSAALKSNGELLTWGCG-EDGQLGHGD------VLNQT---IPKVVQ 726

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           +  +  V  + CG +H + +TK G++F+WG    G+LG G       P L+  L   N+ 
Sbjct: 727 TMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNII 786

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG  H   +T + ++  +G+G      +G  + +S  +P  V   L  +++  +SCG
Sbjct: 787 QIACGSTHCAVLTNAREVLVFGNG----AAMGSANIIS--VPMMVPA-LKHLNIERLSCG 839

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            + TA +T  G ++T+G G    LGHG + S   P+ V+ LR     ++SCG  H A + 
Sbjct: 840 HYSTAALTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFL- 896

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH--GDKEPRLFPECVAPLIDENICQVACG 477
                        T  GK++T G    G+LGH  GD+     P+ +  L+      V+CG
Sbjct: 897 -------------TDSGKIYTCGKDPFGQLGHAQGDQNK---PKKIDSLLKTTFISVSCG 940

Query: 478 HDLSVAL 484
            + + +L
Sbjct: 941 ENHNASL 947



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 27/278 (9%)

Query: 317 LYTWGDGTY-NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           + TWG  +    G    G + S   P ++  N +   +  ISCG +++A +T  G ++ +
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLP-NFNIPEICSISCGSYYSAALTENGDVYMW 648

Query: 376 GDGS-----FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           G GS        LG+G      +P +VE+L       VS G +H+AA+            
Sbjct: 649 GRGSVKNPPLSTLGNGSLEDQLLPTKVESLS--EVVLVSIGYYHSAAL------------ 694

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
              S G+L TWG G+ G+LGHGD   +  P+ V  +    + QV CG   ++ LT +G V
Sbjct: 695 --KSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKV 752

Query: 491 YTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           +T G++ YGQLG+          +   + +  + ++ACG+ H A LT+  +V  +G GA 
Sbjct: 753 FTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGA- 811

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                G  +  + P +V  LK   ++R+ CG   TA +
Sbjct: 812 ---AMGSANIISVPMMVPALKHLNIERLSCGHYSTAAL 846


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 176/369 (47%), Gaps = 30/369 (8%)

Query: 202 DVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           D+F WG  I     LGG E           + L+P+ ++   A ++  IACG  + V++T
Sbjct: 27  DMFCWGSTIHGELGLGGIEDE---------NILIPRELDFKKAAEIQQIACGENYTVVIT 77

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + GEI+S G    G+LGH  E      QLI  L     +  ACG YHT A+   G L++W
Sbjct: 78  QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G  T   G LG  SK       ++   L    +  I+CG+ H   +T+ G L+++G  S 
Sbjct: 136 GSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 381 GALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG G  I   I P+ +    G+    ++CG +H+ A+              +  G +F
Sbjct: 194 GQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAI--------------SKSGAVF 239

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG  D + R  P  +  L +  IC  ACG + SV LT  G V+T G+  YG
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           QLG       +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+   
Sbjct: 300 QLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHST 359

Query: 559 DNRNSPTLV 567
            +  +P +V
Sbjct: 360 RSVTTPQVV 368



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 29/328 (8%)

Query: 261 KQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           K+ ++F WG    G LG G   + ++  P+ ++      ++ +ACGE +T  +T+ G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 319 TWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           + G+  Y  G LGH  G K    IP      LD       +CG +HT  +   G LF++G
Sbjct: 84  SCGNNDY--GQLGHEKGRKRLQLIP-----GLDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 377 DGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
             + G LG +  +   S PR V+TL      +++CG+ H  A+              T+ 
Sbjct: 137 SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFAL--------------TNN 182

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+L++WG   +G+LG G D +  + P+ ++  I   I  +ACG   S+A++ SG V+  G
Sbjct: 183 GELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242

Query: 495 SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
              +GQLG+    D  +P ++   +  + +   ACG      LT    V+T G G  GQL
Sbjct: 243 KNTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           GHG   N   P  V  L    V ++ CG
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCG 329



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 37/287 (12%)

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
           +  D++ WG   +    LG     +  IPR++        +  I+CG  +T V+T  G +
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFK-KAAEIQQIACGENYTVVITQIGEI 82

Query: 373 FTFGDGSFGALGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           ++ G+  +G LGH  G      IP     L      + +CG +HT A+            
Sbjct: 83  YSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHTLAI------------ 126

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                G+LF+WG   +G+LG   K      P  V  L    + Q+ACG   + ALT +G 
Sbjct: 127 --NEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGE 184

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE--------VACGAYHVAALTSTSK 541
           +Y+ GS + GQLG+        T +  EI   F+          +ACG YH  A++ +  
Sbjct: 185 LYSWGSNSEGQLGLG-------TDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGA 237

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           V+ WGK   GQLG  D  +RN P  +  L++ ++    CG  F+  +
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFL 284



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 14/235 (5%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           ++ N   S+    +   +SVV   + G  H     + G+++ WG   + G LG G   + 
Sbjct: 146 NSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSN-SEGQLGLGTD-IK 203

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
           Y          PK + + + + +  IACG  H++ ++K G +F WG+ + G+LG     D
Sbjct: 204 YEIK-------PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQD 256

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
            + P  ++ L    +   ACGE  +  +T  G ++T G G Y  G LGHGS  +  +PR+
Sbjct: 257 RNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY--GQLGHGSNSNEILPRQ 314

Query: 344 VSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           V   L G  ++ ISCG  HT A+V S G ++ +G G  G LG+    S + P+ V
Sbjct: 315 VM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 198/398 (49%), Gaps = 36/398 (9%)

Query: 195 EDFDSLG--DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
           ED+++ G  D ++WG         GG H       R  +  +P   +S  +     + CG
Sbjct: 480 EDWETGGKCDAYLWG---------GGRHGQLAESGRGVN--VPTVTKSLAS--AQQVVCG 526

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTC 309
                +V   G I + GE S GRLG G   D+     I  L G  V  +A     + H+ 
Sbjct: 527 QNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSL 586

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A+T SG++++WGDG Y  G LGHG+      PR++   L G  +  ++CG  H+AVVT  
Sbjct: 587 ALTDSGEVFSWGDGDY--GKLGHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVVTVD 643

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G LFTFG+G +G LGHG+  +   P  V  L      +V+CG+ HT  +V++ D ++   
Sbjct: 644 GKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHT--LVLSADGNT--- 698

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                   ++ +GDGD G+LG G    +  P+ +  L      ++ CG   SV LT  G 
Sbjct: 699 --------VWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGR 750

Query: 490 VYTMGSAAY-GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           V++ G     GQ    +     P ++   +A  F+++V  GA HV ALTST +V+ WG  
Sbjct: 751 VFSFGQERLTGQPEGRLRGPQKPQQIQA-LASHFIDDVCVGAEHVLALTSTGEVWGWGNN 809

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            +GQLG G  + +  P ++  LK K ++++  G N +A
Sbjct: 810 VDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSA 847



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 30/322 (9%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H++ +T  GE+FSWG+   G+LGHG       P+ IE L G  V  +ACG  H+  VT  
Sbjct: 584 HSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVD 643

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LF 373
           G L+T+G+G Y  G LGHG+  +   P +V+  L+   +  ++CGL HT V+++ G+ ++
Sbjct: 644 GKLFTFGNGDY--GRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVW 700

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
            FGDG +G LG G   + + P+ ++ L G+   ++ CG     +VV+  D          
Sbjct: 701 AFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGT--QFSVVLTND---------- 748

Query: 434 SCGKLFTWGD-----GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
             G++F++G        +GRL  G ++P+      +  ID+    V  G +  +ALT++G
Sbjct: 749 --GRVFSFGQERLTGQPEGRL-RGPQKPQQIQALASHFIDD----VCVGAEHVLALTSTG 801

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            V+  G+   GQLG+  ++      V  ++    + +++ G  H AA T+      +  G
Sbjct: 802 EVWGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTAPPPPPRFPPG 861

Query: 549 ANG--QLGHGDKDNRNSPTLVD 568
           A    QLGH +      P L +
Sbjct: 862 APMPLQLGHPEHTPPQFPALAE 883



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 20/275 (7%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           D Y WG G +   L   G  V+  +P  V+ +L       + CG   T VV   G +   
Sbjct: 489 DAYLWGGGRHGQ-LAESGRGVN--VP-TVTKSLASAQ--QVVCGQNCTFVVQVNGTILAC 542

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G+GS+G LG G+         +  L+G    +++         +  TDS           
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDS----------- 591

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G++F+WGDGD G+LGHG+ + +  P  +  L  E +  +ACG   S  +T  G ++T G+
Sbjct: 592 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGN 651

Query: 496 AAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTWGKGANGQL 553
             YG+LG    A+   P RV   + +  + +VACG  H   L++  + V+ +G G  G+L
Sbjct: 652 GDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKL 710

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G G    + SP  +D L     K++ CG  F+ ++
Sbjct: 711 GLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 45/99 (45%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           F  G E   G    R      P+ +++  +  + ++  GA H + +T  GE++ WG    
Sbjct: 752 FSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVD 811

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
           G+LG G       P +I  L G N+  ++ G  H+ A T
Sbjct: 812 GQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 850


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 189/383 (49%), Gaps = 31/383 (8%)

Query: 203  VFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            V +WG  +    G L G + +V  +FS+    L P          +H I+ G++   +V+
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------IH-ISGGSKSLFIVS 3076

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            + G++F+ GE + GRLG G   +V  P  + +L    V+ VA   G  H  A+T  G ++
Sbjct: 3077 QDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3136

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ +   PR V   L    +  ++CG  H+A ++S G L+T+G G
Sbjct: 3137 SWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLG 3193

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD+ +   P++V  L G R  +V+CG      + +  D            G +
Sbjct: 3194 EYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTED------------GAV 3241

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y
Sbjct: 3242 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 3301

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG      +   +  G +    V  VA GA H  A+T   +VY WG   +GQ G G+ 
Sbjct: 3302 YRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNT 3361

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L    V RV CG
Sbjct: 3362 FVNKKPALVIGLDAVFVNRVACG 3384



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 4170 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4229

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG+++S   P+ V  +L+G+ 
Sbjct: 4230 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMS 4286

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +TS+GH+ T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 4287 VADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 4346

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 4347 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4394

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   + +LG    D +   +    +    +  +A G+ H
Sbjct: 4395 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4454

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A +   +VYTWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 4455 CVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4503



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 169/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G VF  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 3079 GKVFACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 3129

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 3130 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 3189

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P++V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3190 WGLGEY--GRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    ++ P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLAL--------------TRAGE 3292

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 3293 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3352

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3353 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3390



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 4221 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4280

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4281 HLNGMSVADIACGSAHSAAITSSGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4337

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4338 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4397

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4398 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4443

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + +G VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4444 KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4503

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4504 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4551

Query: 586  AIIC 589
             ++C
Sbjct: 4552 ELLC 4555



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    + V +IACG+ H+  +T
Sbjct: 4252 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMSVADIACGSAHSAAIT 4301

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4302 SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4361

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4362 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H  A               +  G
Sbjct: 4419 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVAC--------------SDAG 4462

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4463 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 158/322 (49%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            I+ WG    G+LG    + +  P   E LS +    +A GE    AVT  G L+  G   
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG--- 4204

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y SG          W    + G+L  + +  ++   G  H   +T+ G ++ +G+G  G 
Sbjct: 4205 YGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4264

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ VE L G+    ++CG  H+AA+              TS G + TWG
Sbjct: 4265 LGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAI--------------TSSGHVLTWG 4310

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +T   +V++ G   YG+
Sbjct: 4311 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4370

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  +P +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG  D
Sbjct: 4371 LGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4429

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4430 HVRRPKKVAALQGKKIISIATG 4451



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 31/333 (9%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +  WG     +LG  + + V  P   + +S +    ++ G      V++ G ++  G+GT
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS-----CGLWHTAVVTSAGHLFTFGDGS 379
              +G LG G   +  +P +    L  +H   +       G  H   +T  G +F++G+G 
Sbjct: 3089 --NGRLGLGVTHNVPLPHQ----LPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3142

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+  +   PR VE LR  +   V+CG  H+AA+              +S G+L+
Sbjct: 3143 DGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI--------------SSQGELY 3188

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +L P+ V  L    + QVACG     ++ALT  G V++ G   
Sbjct: 3189 TWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGD 3248

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +G+LG   ++G         ++   V ++ CGA    ALT   +V+TWGKG   +LGHG 
Sbjct: 3249 FGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3308

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              +   P  +  L+ ++V  V  G    A+ CL
Sbjct: 3309 DQHVRKPQPIGGLRGRRVIHVAVG----ALHCL 3337



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    +S++ +   S+H +A     S G V  WG+G   G LG G+      
Sbjct: 4272 SYDRPKLVEHLNGMSVADIACGSAHSAA---ITSSGHVLTWGKG-RYGRLGHGDSE---- 4323

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 4324 -----DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4378

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 4379 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKK 4436

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    + AG ++T+GD   G LG G   +   PR V  L+G 
Sbjct: 4437 VAA-LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK 4495

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSP 429
               +V+CG  HT A+  +  S    P
Sbjct: 4496 HIVKVTCGSAHTLALSTSQLSERLRP 4521



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 46/282 (16%)

Query: 179 ISLSSVVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           ++  +++S + H  G      DS  + + WG         G +HR+G+  +        +
Sbjct: 610 LAQETILSIAGHCEGRHFLAIDSNRNAYSWG--------AGEDHRLGHGDTHA------R 655

Query: 237 AVESTM-ALD--VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           AV + + ALD  V  + CG  ++  +T  G +++WG  + GRLGHG   D   P ++  L
Sbjct: 656 AVPTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMAL 715

Query: 294 SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
           +   +  VA   G+ H+  +T  G +Y WGDG Y  G LG+G+  S   P  V   L  +
Sbjct: 716 AEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY--GKLGNGNCNSSLQPILVE-TLPRV 772

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST----SIPREVETLRGLRTTR 407
               I  G   +  +T+ GHL+++G  S   LGH     +    S+PR V +L+  R   
Sbjct: 773 Q--RIFAGAQSSMALTTEGHLYSWGKAS--CLGHQQVERSVQGCSVPRLVSSLQHKRLVD 828

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           V+ GV H  A+              TSCG++F WG  D  ++
Sbjct: 829 VAVGVAHCLAL--------------TSCGEVFGWGRNDSQQI 856



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  + L+     L+    VT  G LF 
Sbjct: 4148 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKLFA 4202

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 4203 TGYGSGGRLGVGGSDSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 4250

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ V  L   ++  +ACG   S A+T+SGHV T G
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWG 4310

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +T    V++WG G  G
Sbjct: 4311 KGRYGRLGHGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDYG 4369

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4370 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 4406



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 35/256 (13%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVV 420
           H   + S  + +++G G    LGHGD  + ++P ++  L R ++   V CG  ++AA+  
Sbjct: 626 HFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRCVKA--VFCGCSYSAAI-- 681

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD- 479
                       T  G L+TWG G  GRLGHG+ + +  P  V  L +  I  VA G   
Sbjct: 682 ------------TWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGD 729

Query: 480 -LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--VEEVACGAYHVAAL 536
             S+ LT+ G VY  G   YG+LG    +G   + +   + E+   V+ +  GA    AL
Sbjct: 730 AHSLCLTSEGLVYAWGDGDYGKLG----NGNCNSSLQPILVETLPRVQRIFAGAQSSMAL 785

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNR----NSPTLVDFLKDKQVKRVVCG----LNFTAII 588
           T+   +Y+WGK +   LGH   +      + P LV  L+ K++  V  G    L  T+  
Sbjct: 786 TTEGHLYSWGKASC--LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCG 843

Query: 589 CLHKWVSSVDHSVCSS 604
            +  W  +    +C S
Sbjct: 844 EVFGWGRNDSQQICPS 859



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4145 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4194

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4195 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4248

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+TS+  V T
Sbjct: 4249 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLT 4308

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4309 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4354



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 448 RLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
           RLG    +P L P+ +  L  E I  +A  C     +A+ ++ + Y+ G+    +LG   
Sbjct: 596 RLG----KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651

Query: 506 ADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
                VPT++     +  V+ V CG  + AA+T +  +YTWG+G  G+LGHG+ D++  P
Sbjct: 652 THARAVPTKISA--LDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP 709

Query: 565 TLVDFLKDKQVKRVVCGLNFTAIICL 590
            +V  L + ++  V  G      +CL
Sbjct: 710 AIVMALAEYEIIDVALGSGDAHSLCL 735


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 169/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D+   + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R FP  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D   P  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDYKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G  + +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDYKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D   P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 169/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D+   + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R FP  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D   P  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDYKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G  + +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDYKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D   P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/382 (35%), Positives = 195/382 (51%), Gaps = 38/382 (9%)

Query: 204  FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD-VHNIACGARHAVLVTKQ 262
            ++WG G+ +G       ++G + +      LP+ +E   A D +  I  G     L +  
Sbjct: 733  YVWG-GVRHG-------QLGLNMNVGRHCALPRRLE---AFDNMQTIELGLNCTFLCSAS 781

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYT 319
            G + S GE S GRLGHG   D+S P L+  L G  V  ++     + HT A+T SG+L+T
Sbjct: 782  GAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFT 841

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            WGDG Y  G LGHG+      PR V   L G  +    CG  HTAVVT+ G+L+TFG G 
Sbjct: 842  WGDGDY--GKLGHGNSERQRRPRLVE-TLVGETVVDGCCGYKHTAVVTATGYLYTFGYGD 898

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            +G LGHG+  S   P  V   + +    VSCG+ HT A+         S  G T    ++
Sbjct: 899  YGRLGHGNTTSKKTPTLVHDCQNI--VSVSCGLNHTLAL---------SRDGMT----VW 943

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
             +GDGD G+LG G+      P  +A L +  I  V CGH  SV L  +G VY  G  A+ 
Sbjct: 944  AFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFN 1003

Query: 500  QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             +G P    ++PT++  E  +  V +++CGA +  AL     V++WG  ++GQ+G G  +
Sbjct: 1004 GIGGP-GQTVIPTKL--ETIKKRVFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFN 1060

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
              + P L   L   ++K+V  G
Sbjct: 1061 KVHEPLLT--LTGHRIKQVRAG 1080



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 25/279 (8%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y WG   +    L       C +PR++    D  ++  I  GL  T + +++G + + G+
Sbjct: 733 YVWGGVRHGQLGLNMNVGRHCALPRRLEA-FD--NMQTIELGLNCTFLCSASGAVTSTGE 789

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW---HTAAVVVATDSSSSSPSGSTS 434
           GS+G LGHG+    S+P  V  L+G   T +S  V    HT A+              T 
Sbjct: 790 GSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAI--------------TE 835

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G+LFTWGDGD G+LGHG+ E +  P  V  L+ E +    CG+  +  +T +G++YT G
Sbjct: 836 SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFG 895

Query: 495 SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQ 552
              YG+LG         PT V     ++ V  V+CG  H  AL+     V+ +G G  G+
Sbjct: 896 YGDYGRLGHGNTTSKKTPTLVHD--CQNIV-SVSCGLNHTLALSRDGMTVWAFGDGDFGK 952

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           LG G+     SP  +  L++  +K V CG  ++  + ++
Sbjct: 953 LGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAIN 991



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            GDV++ G+   NG  G G+             ++P  +E T+   V  I+CGA + + + 
Sbjct: 992  GDVYVSGQDAFNGIGGPGQ------------TVIPTKLE-TIKKRVFQISCGAEYTLALD 1038

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            + G ++SWG  S G++G G    V  P L   L+G  ++ V  G+ H+ A T
Sbjct: 1039 EDGNVWSWGNNSDGQVGCGHFNKVHEPLL--TLTGHRIKQVRAGKTHSIAWT 1088


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 196/403 (48%), Gaps = 31/403 (7%)

Query: 183  SVVSSSSHGSAHEDFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
            +V +S    +A  + D    V +WG  +    G L G + +V  +FS+    L P     
Sbjct: 2968 AVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----- 3021

Query: 241  TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                 +H IA G++   +V++ G++++ GE + GRLG G   +V  P  + +L    V+ 
Sbjct: 3022 -----IH-IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK 3075

Query: 301  VAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
            VA   G  H  A+T  G +++WG+G    G LGHG++ +   PR V   L    +  ++C
Sbjct: 3076 VAVHSGGKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVAC 3132

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            G  H+A ++S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      +
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
             +  D            G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG 
Sbjct: 3193 ALTED------------GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGA 3240

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
              S+ALT +G V+T G   Y +LG      +   +  G +    V  VA GA H  A+T 
Sbjct: 3241 QFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3300

Query: 539  TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              +VY WG   +GQ G G+      P LV  L    V RV CG
Sbjct: 3301 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4240

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4301 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4346

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4347 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4406

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4407 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4454

Query: 586  AIIC 589
             ++C
Sbjct: 4455 ELVC 4458



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 167/341 (48%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 3038 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLRQYVVKKVA---VHS---GGKHALAL 3088

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 3089 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 3148

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3149 WGLGEY--GRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL--------------TRAGE 3251

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 3252 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3312 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3349



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    + V +IACG+ H+  +T
Sbjct: 4155 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMSVADIACGSAHSAAIT 4204

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4264

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4265 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 4322 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 4365

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4366 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 126/266 (47%), Gaps = 19/266 (7%)

Query: 169  DRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            D+    E  R   +  V   SSH +A     S G+++ WG G   G LG G++       
Sbjct: 3114 DKPRLVEALRAKKIRDVACGSSHSAA---ISSQGELYTWGLG-EYGRLGHGDN------- 3162

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              T  L PK V +     V  +ACG+R A  + +T+ G +FSWG+   G+LG G      
Sbjct: 3163 --TTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE LSG+ V  + CG   + A+TR+G+++TWG G Y    LGHG       P+ + 
Sbjct: 3221 TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR--LGHGGDQHVRKPQPI- 3277

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  + +++ G  H   VT AG ++ +GD   G  G G+      P  V  L  +  
Sbjct: 3278 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3337

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSG 431
             RV+CG  H+ A  +   SS     G
Sbjct: 3338 NRVACGSSHSIAWGLPNASSDEEKRG 3363



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 29/313 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             +  +AC     ++++++G++++W      RL    + +     + E+   V + +   
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW------RLA---KPEAEPLPMEEVAHDVFISIAGH 622

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           C   H  A+  + + Y+WG G  +   LGHG   +  +P K++  L+   +  + CG  +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 679

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A +T  G+L T+G G++  LGHG+    S+P  V  L                 V VA 
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS------------DHMVVDVAL 727

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S  +     TS G +F WGDGD G+LG+G+    L P  V  L    + +V  G   SV
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSV 785

Query: 483 ALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           AL++ G +YT G A     QL      G    R+   +    + +VA    H  AL+S+ 
Sbjct: 786 ALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSG 845

Query: 541 KVYTWGKGANGQL 553
           +V+ WG+  + Q+
Sbjct: 846 EVFGWGRNDSQQI 858



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 17/255 (6%)

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            GSKV      +    L  IH++  S  L+   +V+  G ++  G+G+ G LG G   +  
Sbjct: 3004 GSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVSQDGKVYACGEGTNGRLGLGVTHNVP 3060

Query: 393  IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            +P ++  LR     +V+       A+ +  D            GK+F+WG+G+ G+LGHG
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLD------------GKVFSWGEGEDGKLGHG 3108

Query: 453  DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            ++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG       +  
Sbjct: 3109 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 3168

Query: 513  RVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  ++P  ++ L
Sbjct: 3169 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3228

Query: 571  KDKQVKRVVCGLNFT 585
                V ++ CG  F+
Sbjct: 3229 SGIGVVQIECGAQFS 3243



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 128/287 (44%), Gaps = 33/287 (11%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            ++ VAC E     +++ G LYTW      +  L    +V+  +   ++G+ +G H   I
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPM-EEVAHDVFISIAGHCEGRHFLAI 631

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
                H A        +++G G    LGHGD  + ++P ++  L       V CG  ++A
Sbjct: 632 DSN--HNA--------YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T  G L TWG G   RLGHG+ + R  P  V  L D  +  VA 
Sbjct: 682 AI--------------TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVAL 727

Query: 477 GHD--LSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHV 533
           G     S+ALT+ G V+  G   YG+LG    +G L P  V+   +   V+ V  G+   
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE---SLPRVQRVFAGSQFS 784

Query: 534 AALTSTSKVYTWGKGA--NGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            AL+S  ++YTWGK      QL        + P LV  L+ K++  V
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV 831



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG G+  RLGHGD   R  P  +A L    +  V CG   S A+T  G++ T G   Y
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 697

Query: 499 GQLGVPVADGL-VPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGH 555
            +LG   +D   +PT V   +++  V +VA G+   H  ALTS   V+ WG G  G+LG+
Sbjct: 698 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 756

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           G+ +    P LV+ L   +V+RV  G  F+  +     L+ W
Sbjct: 757 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTW 796



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 130/307 (42%), Gaps = 51/307 (16%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS  + + WG G         +HR+G+  +      +P  + +     V ++ CG  ++
Sbjct: 631 IDSNHNAYSWGTG--------EDHRLGHGDTHARA--VPTKIAALEQHCVQSVYCGCSYS 680

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
             +T  G + +WG  +  RLGHG   D S P L+  LS   V  VA   G+ H+ A+T  
Sbjct: 681 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI------HLSYISCGLWHTAVVTS 368
           G ++ WGDG Y  G LG+G+          +G+L  I       +  +  G   +  ++S
Sbjct: 741 GLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVFAGSQFSVALSS 789

Query: 369 AGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            G L+T+G  +   LGH          S+PR V +L+  R   V+  V H  A+      
Sbjct: 790 EGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL------ 841

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRL--GHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                   +S G++F WG  D  ++       EP L    +  L       +AC    S+
Sbjct: 842 --------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSL 893

Query: 483 ALTTSGH 489
             T S H
Sbjct: 894 VWTQSSH 900



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
            AV  + + ++++P     C  +  WG  DK +LG         P     +       +A 
Sbjct: 2968 AVSTSHEEAAAAPEQDLPC-TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG 3026

Query: 477  GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVA 534
            G      ++  G VY  G    G+LG+ V   +        + +  V++VA   G  H  
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHAL 3086

Query: 535  ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----L 590
            ALT   KV++WG+G +G+LGHG++   + P LV+ L+ K+++ V CG + +A I     L
Sbjct: 3087 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 3146

Query: 591  HKW 593
            + W
Sbjct: 3147 YTW 3149



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4097

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4098 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4151

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4152 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLT 4211

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4212 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 10/147 (6%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           GKL+TW      RL   + EP L  E VA  +  +I     G    +A+ ++ + Y+ G+
Sbjct: 591 GKLYTW------RLAKPEAEP-LPMEEVAHDVFISIAGHCEGRHF-LAIDSNHNAYSWGT 642

Query: 496 AAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               +LG        VPT++   + +  V+ V CG  + AA+T    + TWG+G   +LG
Sbjct: 643 GEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG 701

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           HG+ D+R+ PTLV  L D  V  V  G
Sbjct: 702 HGNSDDRSLPTLVVALSDHMVVDVALG 728



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA-- 527
            I QVAC     + L+  G +YT       +L  P A+ L P     E+A      +A  
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPL-PME---EVAHDVFISIAGH 622

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           C   H  A+ S    Y+WG G + +LGHGD   R  PT +  L+   V+ V CG +++A 
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682

Query: 588 I 588
           I
Sbjct: 683 I 683


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 179/371 (48%), Gaps = 34/371 (9%)

Query: 202 DVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           D+F WG        LGG E  +          L+P  V+   A ++  IACG  + V++T
Sbjct: 48  DMFCWGNTRHGELGLGGIEDEI---------ILVPCEVDFKKASEIQQIACGENYTVVIT 98

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G+I+S G    G+LGH  E      QLI  L     +  ACG YHT AV   G L++W
Sbjct: 99  HDGKIYSCGNNDYGQLGH--EQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSW 156

Query: 321 GDGTYNSGLLGHGSK--VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G  +   G LG  SK  + C  PR V   L    +  I+CG+ H   +T+ G L+++G  
Sbjct: 157 GSNS--EGQLGLNSKNFMEC-SPRMVK-TLGTSIIVQIACGMKHALALTNNGELYSWGSN 212

Query: 379 SFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           S G LG G  I   + P+ + TL G+    ++CG +H+ A+              +  G 
Sbjct: 213 SEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAI--------------SKSGA 258

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F WG    G+LG  D + R  P  +  L +  +C  ACG + SV LT  G V+T G+  
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHG 556
           YGQLG    +  +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+ 
Sbjct: 319 YGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNN 378

Query: 557 DKDNRNSPTLV 567
              +  +P +V
Sbjct: 379 STRSTTTPQVV 389



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 29/330 (8%)

Query: 259 VTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           + K+ ++F WG    G LG G   D  +  P  ++      ++ +ACGE +T  +T  G 
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 317 LYTWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           +Y+ G+  Y  G LGH  G K       ++   LD       +CG +HT  V   G LF+
Sbjct: 103 IYSCGNNDY--GQLGHEQGRK-----RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFS 155

Query: 375 FGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +G  S G LG +  +     PR V+TL      +++CG+ H  A+              T
Sbjct: 156 WGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALAL--------------T 201

Query: 434 SCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           + G+L++WG   +G+LG G D    + P+ +  L    I  +ACG   S+A++ SG ++ 
Sbjct: 202 NNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFG 261

Query: 493 MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G   +GQLG+    +  +P ++   +  + V   ACG      LT    V+T G G  G
Sbjct: 262 WGKNTFGQLGLNDTQNRNLPYQLQ-TLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYG 320

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           QLGHG  +N   P  V  L    V ++ CG
Sbjct: 321 QLGHGSNNNEILPRQVMELMGSTVTQISCG 350



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 33/288 (11%)

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           ++ +  D++ WG+  +    LG        +P +V        +  I+CG  +T V+T  
Sbjct: 42  SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFK-KASEIQQIACGENYTVVITHD 100

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT---TRVSCGVWHTAAVVVATDSSS 426
           G +++ G+  +G LGH         + ++ + GL      + +CG +HT AV        
Sbjct: 101 GKIYSCGNNDYGQLGHEQG-----RKRLQLILGLDAFVFKKAACGAYHTIAV-------- 147

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC----VAPLIDENICQVACGHDLSV 482
                    G+LF+WG   +G+LG   K    F EC    V  L    I Q+ACG   ++
Sbjct: 148 ------NEWGQLFSWGSNSEGQLGLNSKN---FMECSPRMVKTLGTSIIVQIACGMKHAL 198

Query: 483 ALTTSGHVYTMGSAAYGQLG--VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           ALT +G +Y+ GS + GQLG  V +   + P  ++  +A   +  +ACG YH  A++ + 
Sbjct: 199 ALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLIN-TLAGVPIAFIACGGYHSIAISKSG 257

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            ++ WGK   GQLG  D  NRN P  +  L++ +V    CG  F+  +
Sbjct: 258 AIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFL 305


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 196/403 (48%), Gaps = 31/403 (7%)

Query: 183  SVVSSSSHGSAHEDFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
            +V +S    +A  + D    V +WG  +    G L G + +V  +FS+    L P     
Sbjct: 2623 AVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----- 2676

Query: 241  TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                 +H IA G++   +V++ G++++ GE + GRLG G   +V  P  + +L    V+ 
Sbjct: 2677 -----IH-IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKK 2730

Query: 301  VAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
            VA   G  H  A+T  G +++WG+G    G LGHG++ +   PR V   L    +  ++C
Sbjct: 2731 VAVHSGGKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVAC 2787

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            G  H+A ++S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      +
Sbjct: 2788 GSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL 2847

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
             +  D            G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG 
Sbjct: 2848 ALTED------------GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGA 2895

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
              S+ALT +G V+T G   Y +LG      +   +  G +    V  VA GA H  A+T 
Sbjct: 2896 QFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 2955

Query: 539  TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              +VY WG   +GQ G G+      P LV  L    V RV CG
Sbjct: 2956 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2998



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 168/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+    + VH+   G +HA+ +
Sbjct: 2693 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKK---VAVHS---GGKHALAL 2743

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 2744 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 2803

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 2804 WGLGEY--GRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 2860

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 2861 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL--------------TRAGE 2906

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 2907 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2966

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 2967 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3004



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 127/271 (46%), Gaps = 19/271 (7%)

Query: 169  DRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            D+    E  R   +  V   SSH +A     S G+++ WG G   G LG G++       
Sbjct: 2769 DKPRLVEALRAKKIRDVACGSSHSAA---ISSQGELYTWGLG-EYGRLGHGDN------- 2817

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              T  L PK V +     V  +ACG+R A  + +T+ G +FSWG+   G+LG G      
Sbjct: 2818 --TTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 2875

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE LSG+ V  + CG   + A+TR+G+++TWG G Y    LGHG       P+ + 
Sbjct: 2876 TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR--LGHGGDQHVRKPQPI- 2932

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  + +++ G  H   VT AG ++ +GD   G  G G+      P  V  L  +  
Sbjct: 2933 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 2992

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             RV+CG  H+ A  +   SS     G    G
Sbjct: 2993 NRVACGSSHSIAWGLPNASSDEEKRGPVPFG 3023



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 29/313 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             +  +AC     ++++++G++++W      RL    + +     + E+   V + +   
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW------RLA---KPEAEPLPMEEVAHDVFISIAGH 276

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           C   H  A+  + + Y+WG G  +   LGHG   +  +P K++  L+   +  + CG  +
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 333

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A +T  G+L T+G G++  LGHG+    S+P  V  L                 V VA 
Sbjct: 334 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS------------DHMVVDVAL 381

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S  +     TS G +F WGDGD G+LG+G+    L P  V  L    + +V  G   SV
Sbjct: 382 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSV 439

Query: 483 ALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           AL++ G +YT G A     QL      G    R+   +    + +VA    H  AL+S+ 
Sbjct: 440 ALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSG 499

Query: 541 KVYTWGKGANGQL 553
           +V+ WG+  + Q+
Sbjct: 500 EVFGWGRNDSQQI 512



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 17/255 (6%)

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            GSKV      +    L  IH++  S  L+   +V+  G ++  G+G+ G LG G   +  
Sbjct: 2659 GSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVSQDGKVYACGEGTNGRLGLGVTHNVP 2715

Query: 393  IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            +P ++  L      +V+       A+ +  D            GK+F+WG+G+ G+LGHG
Sbjct: 2716 LPHQLPVLHQYVVKKVAVHSGGKHALALTLD------------GKVFSWGEGEDGKLGHG 2763

Query: 453  DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            ++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG       +  
Sbjct: 2764 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 2823

Query: 513  RVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  ++P  ++ L
Sbjct: 2824 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 2883

Query: 571  KDKQVKRVVCGLNFT 585
                V ++ CG  F+
Sbjct: 2884 SGIGVVQIECGAQFS 2898



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 128/287 (44%), Gaps = 33/287 (11%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            ++ VAC E     +++ G LYTW      +  L    +V+  +   ++G+ +G H   I
Sbjct: 227 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPM-EEVAHDVFISIAGHCEGRHFLAI 285

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
                H A        +++G G    LGHGD  + ++P ++  L       V CG  ++A
Sbjct: 286 DSN--HNA--------YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 335

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T  G L TWG G   RLGHG+ + R  P  V  L D  +  VA 
Sbjct: 336 AI--------------TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVAL 381

Query: 477 GHD--LSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHV 533
           G     S+ALT+ G V+  G   YG+LG    +G L P  V+   +   V+ V  G+   
Sbjct: 382 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE---SLPRVQRVFAGSQFS 438

Query: 534 AALTSTSKVYTWGKGA--NGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            AL+S  ++YTWGK      QL        + P LV  L+ K++  V
Sbjct: 439 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV 485



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG G+  RLGHGD   R  P  +A L    +  V CG   S A+T  G++ T G   Y
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 351

Query: 499 GQLGVPVADGL-VPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGH 555
            +LG   +D   +PT V   +++  V +VA G+   H  ALTS   V+ WG G  G+LG+
Sbjct: 352 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 410

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           G+ +    P LV+ L   +V+RV  G  F+  +     L+ W
Sbjct: 411 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTW 450



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 130/307 (42%), Gaps = 51/307 (16%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS  + + WG G         +HR+G+  +      +P  + +     V ++ CG  ++
Sbjct: 285 IDSNHNAYSWGTG--------EDHRLGHGDTHARA--VPTKIAALEQHCVQSVYCGCSYS 334

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
             +T  G + +WG  +  RLGHG   D S P L+  LS   V  VA   G+ H+ A+T  
Sbjct: 335 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 394

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI------HLSYISCGLWHTAVVTS 368
           G ++ WGDG Y  G LG+G+          +G+L  I       +  +  G   +  ++S
Sbjct: 395 GLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVFAGSQFSVALSS 443

Query: 369 AGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            G L+T+G  +   LGH          S+PR V +L+  R   V+  V H  A+      
Sbjct: 444 EGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL------ 495

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRL--GHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                   +S G++F WG  D  ++       EP L    +  L       +AC    S+
Sbjct: 496 --------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSL 547

Query: 483 ALTTSGH 489
             T S H
Sbjct: 548 VWTQSSH 554



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
            AV  + + ++++P     C  +  WG  DK +LG         P     +       +A 
Sbjct: 2623 AVSTSHEEAAAAPEQDLPC-TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG 2681

Query: 477  GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVA 534
            G      ++  G VY  G    G+LG+ V   +        + +  V++VA   G  H  
Sbjct: 2682 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 2741

Query: 535  ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----L 590
            ALT   KV++WG+G +G+LGHG++   + P LV+ L+ K+++ V CG + +A I     L
Sbjct: 2742 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 2801

Query: 591  HKW 593
            + W
Sbjct: 2802 YTW 2804



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH---DLSVALTTSGHVYT 492
           GKL+TW      RL   + EP    E     +  ++     GH      +A+ ++ + Y+
Sbjct: 245 GKLYTW------RLAKPEAEPLPMEE-----VAHDVFISIAGHCEGRHFLAIDSNHNAYS 293

Query: 493 MGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G+    +LG        VPT++   + +  V+ V CG  + AA+T    + TWG+G   
Sbjct: 294 WGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYA 352

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +LGHG+ D+R+ PTLV  L D  V  V  G
Sbjct: 353 RLGHGNSDDRSLPTLVVALSDHMVVDVALG 382



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA-- 527
            I QVAC     + L+  G +YT       +L  P A+ L P     E+A      +A  
Sbjct: 227 QIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPL-PME---EVAHDVFISIAGH 276

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           C   H  A+ S    Y+WG G + +LGHGD   R  PT +  L+   V+ V CG +++A 
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 336

Query: 588 I 588
           I
Sbjct: 337 I 337


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 175/369 (47%), Gaps = 30/369 (8%)

Query: 202 DVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           D+F WG  I     LGG E           + L+P+ ++   A ++  IACG  + V++T
Sbjct: 27  DMFCWGSTIHGELGLGGIEDE---------NILIPRELDFKKAAEIQQIACGENYTVVIT 77

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + GEI+S G    G+LGH  E      QLI  L     +  ACG YHT A+   G L++W
Sbjct: 78  QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G  T   G LG  SK       ++   L    +  I+CG+ H   +T+ G L+++G  S 
Sbjct: 136 GSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 381 GALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG G      I P+ +    G+    ++CG +H+ A+              +  G +F
Sbjct: 194 GQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAI--------------SKSGAVF 239

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG  D + R  P  +  L +  IC  ACG + SV LT  G V+T G+  YG
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           QLG       +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+   
Sbjct: 300 QLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHST 359

Query: 559 DNRNSPTLV 567
            +  +P +V
Sbjct: 360 RSVTTPQVV 368



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 29/328 (8%)

Query: 261 KQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           K+ ++F WG    G LG G   + ++  P+ ++      ++ +ACGE +T  +T+ G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 319 TWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           + G+  Y  G LGH  G K    IP      LD       +CG +HT  +   G LF++G
Sbjct: 84  SCGNNDY--GQLGHEKGRKRLQLIP-----GLDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 377 DGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
             + G LG +  +   S PR V+TL      +++CG+ H  A+              T+ 
Sbjct: 137 SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFAL--------------TNN 182

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+L++WG   +G+LG G D +  + P+ ++  I   I  +ACG   S+A++ SG V+  G
Sbjct: 183 GELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242

Query: 495 SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
              +GQLG+    D  +P ++   +  + +   ACG      LT    V+T G G  GQL
Sbjct: 243 KNTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           GHG   N   P  V  L    V ++ CG
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCG 329



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 37/287 (12%)

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
           +  D++ WG   +    LG     +  IPR++        +  I+CG  +T V+T  G +
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFK-KAAEIQQIACGENYTVVITQIGEI 82

Query: 373 FTFGDGSFGALGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           ++ G+  +G LGH  G      IP     L      + +CG +HT A+            
Sbjct: 83  YSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHTLAI------------ 126

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                G+LF+WG   +G+LG   K      P  V  L    + Q+ACG   + ALT +G 
Sbjct: 127 --NEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGE 184

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE--------VACGAYHVAALTSTSK 541
           +Y+ GS + GQLG+        T    EI   F+          +ACG YH  A++ +  
Sbjct: 185 LYSWGSNSEGQLGLG-------TDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGA 237

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           V+ WGK   GQLG  D  +RN P  +  L++ ++    CG  F+  +
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFL 284



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 14/235 (5%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           ++ N   S+    +   +SVV   + G  H     + G+++ WG   + G LG G     
Sbjct: 146 NSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSN-SEGQLGLG----- 199

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
              +     + PK + + + + +  IACG  H++ ++K G +F WG+ + G+LG     D
Sbjct: 200 ---TDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQD 256

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
            + P  ++ L    +   ACGE  +  +T  G ++T G G Y  G LGHGS  +  +PR+
Sbjct: 257 RNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY--GQLGHGSNSNEILPRQ 314

Query: 344 VSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           V   L G  ++ ISCG  HT A+V S G ++ +G G  G LG+    S + P+ V
Sbjct: 315 VM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 189/383 (49%), Gaps = 31/383 (8%)

Query: 203  VFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            V +WG  +    G L G + +V  +FS+    L P          +H IA G++   +V+
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------IH-IAGGSKSLFIVS 3032

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            + G++++ GE + GRLG G   +V  P  + +L    V+ VA   G  H  A+T  G ++
Sbjct: 3033 QDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3092

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ +   PR V   L    +  ++CG  H+A ++S G L+T+G G
Sbjct: 3093 SWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLG 3149

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD+++   P+ V  L G R  +V+CG      + +  D            G +
Sbjct: 3150 EYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTED------------GAV 3197

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG      +   +  G +    V  VA GA H  A+T   +VY WG   +GQ G G+ 
Sbjct: 3258 YRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNT 3317

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L    V RV CG
Sbjct: 3318 FVNKKPALVIGLDAVFVNRVACG 3340



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 168/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+    + VH+   G +HA+ +
Sbjct: 3035 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKK---VAVHS---GGKHALAL 3085

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 3086 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 3145

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG  V+   P+ V   L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3146 WGLGEY--GRLGHGDNVTQLKPKLVVA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL--------------TRAGE 3248

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 3249 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3308

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3309 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3346



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 4120 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4179

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4180 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4236

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4237 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4296

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4297 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4342

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4343 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4402

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4403 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4450

Query: 586  AIIC 589
             ++C
Sbjct: 4451 ELVC 4454



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    + V +IACG+ H+  +T
Sbjct: 4151 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMSVADIACGSAHSAAIT 4200

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4201 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4260

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4261 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 4318 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 4361

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4362 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 126/271 (46%), Gaps = 19/271 (7%)

Query: 169  DRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            D+    E  R   +  V   SSH +A     S G+++ WG G   G LG G++       
Sbjct: 3111 DKPRLVEALRAKKIRDVACGSSHSAA---ISSQGELYTWGLG-EYGRLGHGDN------- 3159

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
                 L PK V +     V  +ACG+R A  + +T+ G +FSWG+   G+LG G      
Sbjct: 3160 --VTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3217

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE LSG+ V  + CG   + A+TR+G+++TWG G Y    LGHG       P+ + 
Sbjct: 3218 TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR--LGHGGDQHVRKPQPI- 3274

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  + +++ G  H   VT AG ++ +GD   G  G G+      P  V  L  +  
Sbjct: 3275 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3334

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             RV+CG  H+ A  +   SS     G    G
Sbjct: 3335 NRVACGSSHSIAWGLPNASSDEEKRGPVPFG 3365



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 29/313 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             +  +AC     ++++++G++++W      RL    + +     + E+   V + +   
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW------RLA---KPEAEPLPMEEVAHEVFISIAGH 619

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           C   H  A+  + + Y+WG G  +   LGHG   +  +P K++  L+   +  + CG  +
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 676

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A +T  G+L T+G G++  LGHG+    S+P  V  L                 V VA 
Sbjct: 677 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS------------DHMVVDVAL 724

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S  +     TS G +F WGDGD G+LG+G+    L P  V  L    + +V  G   S+
Sbjct: 725 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSL 782

Query: 483 ALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           AL++ G +Y+ G A     QL      G    R+   +    + +VA    H  AL+S+ 
Sbjct: 783 ALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSG 842

Query: 541 KVYTWGKGANGQL 553
           +V+ WG+  + Q+
Sbjct: 843 EVFGWGRNDSQQI 855



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 17/255 (6%)

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            GSKV      +    L  IH++  S  L+   +V+  G ++  G+G+ G LG G   +  
Sbjct: 3001 GSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVSQDGKVYACGEGTNGRLGLGVTHNVP 3057

Query: 393  IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            +P ++  L      +V+       A+ +  D            GK+F+WG+G+ G+LGHG
Sbjct: 3058 LPHQLPVLHQYVVKKVAVHSGGKHALALTLD------------GKVFSWGEGEDGKLGHG 3105

Query: 453  DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            ++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG       +  
Sbjct: 3106 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKP 3165

Query: 513  RVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  ++P  ++ L
Sbjct: 3166 KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3225

Query: 571  KDKQVKRVVCGLNFT 585
                V ++ CG  F+
Sbjct: 3226 SGIGVVQIECGAQFS 3240



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 128/287 (44%), Gaps = 33/287 (11%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            ++ VAC E     +++ G LYTW      +  L    +V+  +   ++G+ +G H   I
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPM-EEVAHEVFISIAGHCEGRHFLAI 628

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
                H A        +++G G    LGHGD  + ++P ++  L       V CG  ++A
Sbjct: 629 DSN--HNA--------YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 678

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T  G L TWG G   RLGHG+ + R  P  V  L D  +  VA 
Sbjct: 679 AI--------------TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVAL 724

Query: 477 GHD--LSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHV 533
           G     S+ALT+ G V+  G   YG+LG    +G L P  V+   +   V+ V  G+   
Sbjct: 725 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE---SLPRVQRVFAGSQFS 781

Query: 534 AALTSTSKVYTWGKGA--NGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            AL+S  ++Y+WGK      QL        + P LV  L+ K++  V
Sbjct: 782 LALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV 828



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG G+  RLGHGD   R  P  +A L    +  V CG   S A+T  G++ T G   Y
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 694

Query: 499 GQLGVPVADGL-VPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGH 555
            +LG   +D   +PT V   +++  V +VA G+   H  ALTS   V+ WG G  G+LG+
Sbjct: 695 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 753

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           G+ +    P LV+ L   +V+RV  G  F+  +     L+ W
Sbjct: 754 GNCNGSLQPILVESL--PRVQRVFAGSQFSLALSSEGQLYSW 793



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 51/307 (16%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS  + + WG G         +HR+G+  +      +P  + +     V ++ CG  ++
Sbjct: 628 IDSNHNAYSWGTG--------EDHRLGHGDTHARA--VPTKIAALEQHCVQSVYCGCSYS 677

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
             +T  G + +WG  +  RLGHG   D S P L+  LS   V  VA   G+ H+ A+T  
Sbjct: 678 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 737

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI------HLSYISCGLWHTAVVTS 368
           G ++ WGDG Y  G LG+G+          +G+L  I       +  +  G   +  ++S
Sbjct: 738 GLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVFAGSQFSLALSS 786

Query: 369 AGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            G L+++G  +   LGH          S+PR V +L+  R   V+  V H  A+      
Sbjct: 787 EGQLYSWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL------ 838

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSV 482
                   +S G++F WG  D  ++       EP L    +  L       +AC    S+
Sbjct: 839 --------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSL 890

Query: 483 ALTTSGH 489
             T S H
Sbjct: 891 VWTQSSH 897



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            + + ++P     C  +  WG  DK +LG         P     +       +A G     
Sbjct: 2971 EEAGAAPEQDLPC-TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF 3029

Query: 483  ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTS 540
             ++  G VY  G    G+LG+ V   +        + +  V++VA   G  H  ALT   
Sbjct: 3030 IVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDG 3089

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            KV++WG+G +G+LGHG++   + P LV+ L+ K+++ V CG + +A I     L+ W
Sbjct: 3090 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3146



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4044 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4093

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4094 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4147

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4148 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLT 4207

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4208 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4253



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 14/149 (9%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTTSGHVYTM 493
           GKL+TW      RL   + EP    E    +  E    +A  C     +A+ ++ + Y+ 
Sbjct: 588 GKLYTW------RLAKPEAEPLPMEE----VAHEVFISIAGHCEGRHFLAIDSNHNAYSW 637

Query: 494 GSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G+    +LG        VPT++   + +  V+ V CG  + AA+T    + TWG+G   +
Sbjct: 638 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 696

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG+ D+R+ PTLV  L D  V  V  G
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALG 725



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I QVAC     + L+  G +YT       +L  P A+ L    V  E+  S      C 
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPLPMEEVAHEVFISIAGH--CE 621

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H  A+ S    Y+WG G + +LGHGD   R  PT +  L+   V+ V CG +++A I
Sbjct: 622 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 186/362 (51%), Gaps = 36/362 (9%)

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNV 298
           +  + +H +ACG  H   V K G +++ G  + G+LG G+++  +   PQL+  LS   V
Sbjct: 19  SFQIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKV 78

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDGIH--LSY 355
             V+CG  HTCA+  SG+L++WGD +   G LG  S  S + P+ V+  +L GI+  ++ 
Sbjct: 79  MQVSCGHSHTCAIIDSGELFSWGDSS--EGQLGINSNGSHYNPQLVNFSDLKGINTFVTD 136

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +SCG +HT  V   G + +FG G  G LG G+      P  + +L   +  +V CG +HT
Sbjct: 137 VSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIKVKCGFYHT 194

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQV 474
               +  D S          G++++ G  D+G+LG G  E  +  P  V  L    I ++
Sbjct: 195 ----LFLDES----------GRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKI 240

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
             G   S A+T +  +Y  G +  GQ        L P  V   I +  V E++ G +   
Sbjct: 241 FAGSH-SAAITDANEIYFFGKSQLGQF-------LYPQLV--RICQGDVNEISIGNHFGV 290

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           A+T   KVY+WG    GQLG GD D R  P+LV+ L +K+V    CG N+  +ICL + +
Sbjct: 291 AVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENY--VICLGQVM 348

Query: 595 SS 596
           +S
Sbjct: 349 NS 350



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 154/353 (43%), Gaps = 50/353 (14%)

Query: 168 NDRSSAAETFRI-SLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYS 225
           N R+S     R+ S   V+   + G  H  F +  G ++  G   A G LG G+  +  S
Sbjct: 6   NKRNSVFYYPRVCSFQIVIHQLACGLDHTAFVAKNGYLYTMGSN-ALGKLGIGQQSLQNS 64

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
           F        P+ V +     V  ++CG  H   +   GE+FSWG+ S G+LG        
Sbjct: 65  FQ-------PQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHY 117

Query: 286 HPQLIEI--LSGVN--VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
           +PQL+    L G+N  V  V+CG YHT AV ++G + ++G G    G LG G++   + P
Sbjct: 118 NPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGK--KGQLGTGNQNKQYKP 175

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETL 400
             ++     I    + CG +HT  +  +G +++ G    G LG G +  + S PR V  L
Sbjct: 176 FLLNSLSQIIK---VKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLEL 232

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPS-----------------------------G 431
                 ++  G  H+AA+  A +      S                              
Sbjct: 233 EHSFIKKIFAGS-HSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVA 291

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            T  GK+++WG   +G+LG GD + R+ P  V PL ++ +    CG +  + L
Sbjct: 292 VTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYVICL 344


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 211/436 (48%), Gaps = 37/436 (8%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---E 305
            I CG     ++   G + + GE S GRLG G   D+   + I  L G  V  +A     E
Sbjct: 3442 IHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLE 3501

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H+ A+T +G++++WGDG Y  G LGHG+      PR++   L G  + +++CG  H+A+
Sbjct: 3502 GHSLALTETGEVFSWGDGDY--GKLGHGNSERQRRPRQIEA-LRGEDVLHVACGHKHSAI 3558

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            VT  G LFTFG    G LG G+  +  +P +V  L+ +    ++CG  HT  VVV TD  
Sbjct: 3559 VTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHT--VVVTTDRE 3616

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
            S           ++T+G+G+ G+LG G    ++ P+ V      NI ++ CG   ++ALT
Sbjct: 3617 S-----------VWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALT 3665

Query: 486  TSGHVYTMG-SAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
              G VY+ G +   G   V        P +V   ++E F+E++A G  H  ALT    V+
Sbjct: 3666 KEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMA-LSEQFIEDIAAGYEHALALTKEGDVW 3724

Query: 544  TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV---SSVDHS 600
            +WG   +GQLG G    +  P L+  L+ K ++++  G N +A      W    +S+  +
Sbjct: 3725 SWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSA-----AWTVAPASIRKA 3779

Query: 601  VCSSCHNPFGFRRKRHNCY-NCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKK 659
            + +S     G   +    Y +   +  +   SR      ++ +I   +R+ D C  KL  
Sbjct: 3780 MATSSSLELGLPERIPEIYGSLAGIDIQLIRSRLQYLLDMSEAIYYSWRLLDLCPKKLSH 3839

Query: 660  TDTKLKRTSGYTSVVQ 675
                   ++G+  ++Q
Sbjct: 3840 I------SNGFMGIMQ 3849



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 165/297 (55%), Gaps = 24/297 (8%)

Query: 274 GRLGHGREADVSHPQLIEILSGVNVE-LVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLL 330
           GRLG G  ++ + P+LI       ++ LV+    + HT A+   G +Y+WGDG Y  G L
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDY--GKL 501

Query: 331 GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           GHG+ V+   P+ + G + G  +  I+ G  H+A +TS G L+T+GDG +G LGHGD+ S
Sbjct: 502 GHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            SIP  V+ + G+ +  VSCG   T  VV++ D+++           ++++G GD G+LG
Sbjct: 562 RSIPTLVKDITGVGS--VSCGSSFT--VVISQDATT-----------VWSFGAGDNGKLG 606

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           HGD      P+ ++ L    I +V C    S+ALT+ G V+  GS      G   A  LV
Sbjct: 607 HGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLV 666

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           P R+D E  +  + ++A G  H  ALT  + VY+WG  A+GQ G G   N NSP L+
Sbjct: 667 PKRLD-EFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLG---NNNSPVLL 719



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 39/312 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    DV ++ACG +H+ +VT
Sbjct: 3511 GEVFSWGDG-DYGKLGHGNSE------RQRR---PRQIEALRGEDVLHVACGHKHSAIVT 3560

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD-LYT 319
              G++F++G    GRLG G  ++   P  +  L  + VEL+ACG  HT  VT   + ++T
Sbjct: 3561 VDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWT 3620

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG--- 376
            +G+G Y  G LG G   +   P+ V      +++  I CG   T  +T  G +++ G   
Sbjct: 3621 FGEGEY--GQLGLGRTTAKMTPQYVDA-FSKLNIKKICCGARFTLALTKEGKVYSCGHNR 3677

Query: 377  -DGSFGA-LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             +G F     H D+     P++V  L       ++ G  H  A+              T 
Sbjct: 3678 CNGIFEVDTQHADY----YPQQVMALSEQFIEDIAAGYEHALAL--------------TK 3719

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY--T 492
             G +++WG+   G+LG G   P+  P  ++ L  + I Q++ GH+ S A T +       
Sbjct: 3720 EGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAAWTVAPASIRKA 3779

Query: 493  MGSAAYGQLGVP 504
            M +++  +LG+P
Sbjct: 3780 MATSSSLELGLP 3791



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 33/215 (15%)

Query: 378 GSFGALGHGDHISTSIPREVE-----TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           G++G LG GD  + + P+ +       ++ L +++ S G  HT A+  A+D         
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDG--HTLAI--ASD--------- 487

Query: 433 TSCGKLFTWGDGDKGRLGHGD----KEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
              G++++WGDGD G+LGHG+    K P+L    + P+  + + Q+A G+  S A+T+ G
Sbjct: 488 ---GRIYSWGDGDYGKLGHGNHVTQKSPKLI---LGPMQGKVVRQIAVGYRHSAAITSEG 541

Query: 489 HVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGA-YHVAALTSTSKVYTWG 546
            +YT G   YG+LG        +PT V        V  V+CG+ + V      + V+++G
Sbjct: 542 LLYTWGDGDYGRLGHGDNHSRSIPTLVKDITG---VGSVSCGSSFTVVISQDATTVWSFG 598

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G NG+LGHGD      P ++  L+   +++V C 
Sbjct: 599 AGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCA 633


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/300 (36%), Positives = 157/300 (52%), Gaps = 17/300 (5%)

Query: 284 VSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
           VS P L+E +  V+++ VA   G  H  A++  G++++WG+     G LGHG++ SC  P
Sbjct: 375 VSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEA--EDGKLGHGNRNSCDRP 432

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
           R +  +L G  +  I+ G  H+A +TS G LFT+G G +G LGHGD      P+ VE L+
Sbjct: 433 RVIE-SLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALK 491

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
           G+R   V+CG      + +  D S            +++WGDGD G+LG G  +    P+
Sbjct: 492 GVRVIDVACGSGDAQTLCITDDDS------------VWSWGDGDYGKLGRGGSDGCKIPQ 539

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES 521
            V  LI + + +V CG   SVALT SG VYT G   Y +LG    D +   R    +   
Sbjct: 540 KVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGK 599

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            V  +A G+ H  A T   +V+TWG    GQLG G       P LV  L+ K++ RV CG
Sbjct: 600 NVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACG 659



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +A   G +H + ++ +GE+FSWGE   G+LGHG       P++IE 
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G  V  +A G  H+  +T +G+L+TWG G Y  G LGHG       P+ V   L G+ 
Sbjct: 438 LRGKEVVDIAAGGAHSACITSTGELFTWGKGRY--GRLGHGDSEDQMKPKLVEA-LKGVR 494

Query: 353 LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  ++CG     T  +T    ++++GDG +G LG G      IP++VE L G    +V C
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T  G ++TWG GD  RLGHG  +    P  VA L  +N
Sbjct: 555 GSQFSVAL--------------TKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKN 600

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    VA T  G V+T G    GQLG      +   R+   +    +  VACG+
Sbjct: 601 VISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGS 660

Query: 531 YHVAALTSTSKVYTWGK 547
            H  A  STSK    GK
Sbjct: 661 AHSLAW-STSKPVNAGK 676



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 153/308 (49%), Gaps = 29/308 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           V+ +S G       S G+VF WGE   +G LG G      S  R      P+ +ES    
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEA-EDGKLGHGNRN---SCDR------PRVIESLRGK 441

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
           +V +IA G  H+  +T  GE+F+WG+   GRLGHG   D   P+L+E L GV V  VAC 
Sbjct: 442 EVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACG 501

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T  +T    +++WGDG Y  G LG G    C IP+KV   L G  +  + CG   
Sbjct: 502 SGDAQTLCITDDDSVWSWGDGDY--GKLGRGGSDGCKIPQKVEA-LIGQGVVKVECGSQF 558

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T +G ++T+G G +  LGHG       PR+V  L+G     ++ G  H  A     
Sbjct: 559 SVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVAC---- 614

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G++FTWGD D+G+LG G       P  VA L  + I +VACG   S+
Sbjct: 615 ----------TDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664

Query: 483 ALTTSGHV 490
           A +TS  V
Sbjct: 665 AWSTSKPV 672



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 128/254 (50%), Gaps = 17/254 (6%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           NS DR    E+ R     VV  ++ G+      S G++F WG+G   G LG G+      
Sbjct: 427 NSCDRPRVIESLRGK--EVVDIAAGGAHSACITSTGELFTWGKG-RYGRLGHGD------ 477

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                D + PK VE+   + V ++ACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 478 ---SEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 534

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              PQ +E L G  V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PRK
Sbjct: 535 CKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHR--LGHGSDDHVRRPRK 592

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V+  L G ++  I+ G  H    T  G +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 593 VAA-LQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGK 651

Query: 404 RTTRVSCGVWHTAA 417
           +  RV+CG  H+ A
Sbjct: 652 KINRVACGSAHSLA 665



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 6/188 (3%)

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           + H     VA +S        +S G++F+WG+ + G+LGHG++     P  +  L  + +
Sbjct: 384 IQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEV 443

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA- 530
             +A G   S  +T++G ++T G   YG+LG   ++  +  ++   +    V +VACG+ 
Sbjct: 444 VDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSG 503

Query: 531 -YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII- 588
                 +T    V++WG G  G+LG G  D    P  V+ L  + V +V CG  F+  + 
Sbjct: 504 DAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALT 563

Query: 589 ---CLHKW 593
              C++ W
Sbjct: 564 KSGCVYTW 571


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 179/347 (51%), Gaps = 39/347 (11%)

Query: 201 GDVFIWGEG-IAN---GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           GDV++WG G + N     LG G            D LLP+ VES   + V  I+ G  H+
Sbjct: 596 GDVYMWGRGSVKNPPIATLGNGTFD---------DQLLPQKVESLQEIVV--ISIGFYHS 644

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             V   GE+ +WG    G+LGHG   +   P++++ ++   V  V CGE HT  +T++G 
Sbjct: 645 AAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGK 704

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++TWG   Y  G LG G       P  V+ +LD  H+  I+CG  H AV+T+   +  FG
Sbjct: 705 VFTWGTSEY--GQLGLGDTQKNCTPMLVT-SLDKYHIIQIACGATHNAVLTNNREVLVFG 761

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +G+  A+G  + I  SIP  V +L+ +   R+SCG + TAA+              T CG
Sbjct: 762 NGA--AMGSANII--SIPIMVPSLKIMNIERLSCGHYSTAAL--------------TECG 803

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            ++TWG G +  LGHG       P+ V  L +++I Q++CG      LT SG +YT G  
Sbjct: 804 DVYTWGSGQE--LGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKD 861

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            +GQLG    D   P ++D  +  +F+  ++CG  H AAL  T++ +
Sbjct: 862 PFGQLGHAAGDQNRPKKIDSLLKTTFM-SISCGENHNAALFDTTRSF 907



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 40/381 (10%)

Query: 216 GGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG- 273
           G G + ++G+    +     P+ + +    D+ +I+CG+ ++  +T+ G+++ WG  S  
Sbjct: 548 GSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVK 607

Query: 274 ----GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGL 329
                 LG+G   D   PQ +E L  + V  ++ G YH+ AV  +G+L TWG G    G 
Sbjct: 608 NPPIATLGNGTFDDQLLPQKVESLQEIVV--ISIGFYHSAAVKSNGELLTWGCG--EDGQ 663

Query: 330 LGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
           LGHG   +  IP KV  ++    ++ + CG  HT  +T  G +FT+G   +G LG GD  
Sbjct: 664 LGHGDVFNQPIP-KVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQ 722

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
               P  V +L      +++CG  H A +              T+  ++  +G+G     
Sbjct: 723 KNCTPMLVTSLDKYHIIQIACGATHNAVL--------------TNNREVLVFGNGA---- 764

Query: 450 GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
             G       P  V  L   NI +++CGH  + ALT  G VYT GS      G  +  G 
Sbjct: 765 AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGS------GQELGHGH 818

Query: 510 VPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
             +    ++ E+     + +++CG  H+A LT + K+YT GK   GQLGH   D +N P 
Sbjct: 819 GTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGD-QNRPK 877

Query: 566 LVDFLKDKQVKRVVCGLNFTA 586
            +D L       + CG N  A
Sbjct: 878 KIDSLLKTTFMSISCGENHNA 898



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 26/270 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           L TWG G+Y         K S   P ++  N +   +  ISCG +++A +T  G ++ +G
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLP-NFNISDICSISCGSYYSAALTENGDVYMWG 602

Query: 377 DGS-----FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            GS        LG+G      +P++VE+L+      +S G +H+AAV             
Sbjct: 603 RGSVKNPPIATLGNGTFDDQLLPQKVESLQ--EIVVISIGFYHSAAV------------- 647

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             S G+L TWG G+ G+LGHGD   +  P+ V  +    + QV CG   ++ LT +G V+
Sbjct: 648 -KSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVF 706

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
           T G++ YGQLG+          +   + +  + ++ACGA H A LT+  +V  +G GA  
Sbjct: 707 TWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGA-- 764

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
               G  +  + P +V  LK   ++R+ CG
Sbjct: 765 --AMGSANIISIPIMVPSLKIMNIERLSCG 792


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 170/338 (50%), Gaps = 22/338 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P+  E      V ++ CG RH V + + G +++ G    G+LGH  E     P+ +  
Sbjct: 23  LEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGH--EKARKKPEQVVS 80

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSGNLDGI 351
           L   N+  V+CGE HT A+   G ++ WG G+   G LG      C  +PR V  +L  +
Sbjct: 81  LDAQNIVAVSCGEAHTLALNDKGQVFAWGLGS--DGQLGLSIVEDCLRVPRTVK-SLSEV 137

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSC 410
           H++ ++CG WH+  +   G +F++G   +G LG G        P+ +++L+G+   ++S 
Sbjct: 138 HITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISA 197

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H+               G T  G +F WG    G+LG GD + R FP  +  L  + 
Sbjct: 198 GGAHSF--------------GLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQ 243

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  + CG D + ALT  G V+T G+  YGQLG    +  V  R   E+  S V ++ACG 
Sbjct: 244 VVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGR 303

Query: 531 YH-VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
            H +A + S+ K+ ++G G NGQLG     NR SPT V
Sbjct: 304 QHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPV 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 146/321 (45%), Gaps = 23/321 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  +  P+  E   G  V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P +V  +LD  ++  +SCG  HT  +   G +F +G GS G 
Sbjct: 60  -CNDLGQLGHEKARK--KPEQVV-SLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQ 115

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG         +PR V++L  +  T+V+CG WH+ A+                 G++F+W
Sbjct: 116 LGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARG--------------GEIFSW 161

Query: 442 GDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G +   +  P+ +  L      Q++ G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQ 221

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           LG+   D      +   +    V  + CG  H AALT    V+T+G G  GQLGH   ++
Sbjct: 222 LGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 561 RNSPTLVDFLKDKQVKRVVCG 581
             +P  V  L    V ++ CG
Sbjct: 282 EVNPRKVFELMGSVVSQIACG 302



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PR+     +G  +  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCE-FFEGKRVRDVGCGRRHTVFLLEDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    +   P +V +L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--ARKKPEQVVSLDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F WG G  G+LG    E  L  P  V  L + +I QVACG+  S+AL   G +++ G 
Sbjct: 104 QVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQ 163

Query: 496 AAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+      V  P  +       F  +++ G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGQQGACVCSPQVIQSLQGIPF-GQISAGGAHSFGLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G GD D+R  P L+  L+ +QV  + CG + TA +
Sbjct: 223 GLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAAL 257



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 189 SHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G AH    +L G +F WG     G LG G++          D   P  +++  +  V 
Sbjct: 196 SAGGAHSFGLTLSGAIFGWGRN-KFGQLGLGDN---------DDRRFPVLLKTLRSQQVV 245

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            I CG  H   +TK+G +F++G    G+LGH       +P+ +  L G  V  +ACG  H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQH 305

Query: 308 TCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           T A +  SG + ++G G   +G LG  S  +   P  V G
Sbjct: 306 TLAFIPSSGKIDSFGLG--GNGQLGTRSTCNRISPTPVKG 343


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 208/469 (44%), Gaps = 88/469 (18%)

Query: 185 VSSSSHGSAH-----EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV- 238
           ++  + GSAH     ED     ++F WG G   G LG         F  + D   P+ + 
Sbjct: 291 ITQVACGSAHILAITED----SELFSWGSG-QYGALG---------FGTRDDIFEPRHLI 336

Query: 239 --ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
             +      +  IACG  H++ +T++ +I +WG+  GGRLGHG E DV  P+ I  LS  
Sbjct: 337 IEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
               ++ GE H+ A++   +LYTWG GTY  G LGHG   S   P+ +  +LD   + ++
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTY--GRLGHGMDTSEKKPKLIE-DLDQYEIIHV 453

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           SCG +HT  +T  G ++ FG G +G LG          RE    R  + +    GV    
Sbjct: 454 SCGAFHTLAITGQGTVYAFGQGKYGKLG-----INRKQREGVFSRPEKISFYKVGVEPQE 508

Query: 417 AVVVATDSSSSSPSGST------SCGKLFTWGDGDKGRLGHGDKEPRLFP--------EC 462
            +V   + +  + +G          GK+++WG   KG LG         P        E 
Sbjct: 509 MLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGEL 568

Query: 463 VA--PLIDE---------------NICQVACGHDLSVALTTSGHVYTMGSAAYGQL---- 501
           +   P IDE                + QVACG   +V+LT  G VY  GS AYGQL    
Sbjct: 569 IGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDK 628

Query: 502 ---------------------GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
                                 +  ++ +   +  GE     +  +ACG  H+ A++  +
Sbjct: 629 DQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETTVR-INYIACGGEHIFAISRMN 687

Query: 541 KVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +++ WG+   GQLG G   D    PTL+  +  K ++ + CG N++A +
Sbjct: 688 ELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 173/378 (45%), Gaps = 70/378 (18%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
           SR T    PK  +      +  +ACG+ H + +T+  E+FSWG    G LG G   D+  
Sbjct: 277 SRPTAIKFPKHTKP-----ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFE 331

Query: 287 PQLIEILSG---VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
           P+ + I        +E +ACG+YH+  +TR   + TWG G    G LGHG +    +P++
Sbjct: 332 PRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQG--QGGRLGHGDEDDVLVPKE 389

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           +  +L      +IS G  H+A ++   +L+T+G G++G LGHG   S   P+ +E L   
Sbjct: 390 IY-DLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQY 448

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR------ 457
               VSCG +HT A+              T  G ++ +G G  G+LG   K+        
Sbjct: 449 EIIHVSCGAFHTLAI--------------TGQGTVYAFGQGKYGKLGINRKQREGVFSRP 494

Query: 458 ----LFPECVAPLIDENICQ-------VACGHDLSVALTTSGHVYTMGSAAYGQLG---- 502
                +   V P   E + Q        A G++ S+ L  SG +Y+ G    G LG    
Sbjct: 495 EKISFYKVGVEP--QEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKG 552

Query: 503 ----VPVADGLVPTRVDGEI--------------AESF---VEEVACGAYHVAALTSTSK 541
               +P+  G +P  + G+I               E+F   V +VACG  +  +LT+  +
Sbjct: 553 FEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGE 612

Query: 542 VYTWGKGANGQLGHGDKD 559
           VY +G  A GQL   DKD
Sbjct: 613 VYVFGSNAYGQLAK-DKD 629



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 194/469 (41%), Gaps = 124/469 (26%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +++ WG G   G LG G           T    PK +E     ++ +++CGA H + +T 
Sbjct: 416 NLYTWGTG-TYGRLGHG---------MDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG 465

Query: 262 QGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVE-------------LVACGE 305
           QG ++++G+   G+LG     RE   S P+ I     V VE             L A G 
Sbjct: 466 QGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYK-VGVEPQEMLVQDKNEAILAAAGY 524

Query: 306 YHTCAVTRSGDLYTWGDGTYN-SGLLG-------HGSKVSCWIPRKVSGNLDGIH----- 352
            H+  + +SG +Y+WG   YN  GLLG       H       IP ++ G +  I      
Sbjct: 525 NHSLCLAKSGKIYSWG---YNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQR 581

Query: 353 --------LSY----ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST--------- 391
                    SY    ++CG+ +T  +T+ G ++ FG  ++G L      +T         
Sbjct: 582 GDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQ 641

Query: 392 -------------------SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
                                P E      +R   ++CG  H  A+              
Sbjct: 642 NNNNDNSQALDSSEQMSLIKFPGETT----VRINYIACGGEHIFAI-------------- 683

Query: 433 TSCGKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
           +   +LF WG  D+G+LG G       EP L    +  +  +NI  +ACG + S A++  
Sbjct: 684 SRMNELFGWGRNDEGQLGLGFVSDFTAEPTL----IRQIAHKNIQMIACGDNYSAAVSAF 739

Query: 488 GHVYTMGSAAYGQLGVPVA---DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS---- 540
           G ++  G+   G+LG+  A     L+   +   +A   ++ VACG  H+ A+   +    
Sbjct: 740 GELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAP--IKSVACGPNHMLAIADYNPDHP 797

Query: 541 ----KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
                 Y+WG+   GQLG G K++ N P  +   K++  K+V CG +F+
Sbjct: 798 IKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKER-FKKVACGQDFS 845



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 147/345 (42%), Gaps = 36/345 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS-HPQLIEILSGVNVELVACG 304
           ++ IACG  H   +++  E+F WG    G+LG G  +D +  P LI  ++  N++++ACG
Sbjct: 670 INYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACG 729

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + ++ AV+  G+L+  G+       LG   K    +   +  NL  I    ++CG  H  
Sbjct: 730 DNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPI--KSVACGPNHML 787

Query: 365 VVTSA--------GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            +           G  +++G    G LG G    +++P+++   +  R  +V+CG     
Sbjct: 788 AIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKVACG----- 841

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
                         G T   +++ WG+          K+  + P+ +  L    I  +AC
Sbjct: 842 ---------QDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDI-PQLLQALEQAQIKDIAC 891

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQL------GVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +     L   G +   GS    ++           + L  T+      +  +E ++ G 
Sbjct: 892 SYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQ 951

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS---PTLVDFLKD 572
            H AA++    +YTWG    G+LG  +K+ +N+   P LV  + D
Sbjct: 952 NHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHD 996



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR---VD 515
           FP+   P     I QVACG    +A+T    +++ GS  YG LG    D +   R   ++
Sbjct: 284 FPKHTKP-----ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIE 338

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
            +    F+E +ACG YH   LT   K+ TWG+G  G+LGHGD+D+   P  +  L  K+ 
Sbjct: 339 KKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKP 398

Query: 576 KRVVCGLNFTAIIC----LHKW 593
             +  G + +A I     L+ W
Sbjct: 399 IFISAGESHSAAISEKLNLYTW 420



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 47/321 (14%)

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
           + ++F WG           E ++G  F     A  P  +      ++  IACG  ++  V
Sbjct: 686 MNELFGWGRN--------DEGQLGLGFVSDFTAE-PTLIRQIAHKNIQMIACGDNYSAAV 736

Query: 260 TKQGEIFSWGEESGGRLGHG---READVSHPQLIEILSGVNVELVACGEYHTCAVT---- 312
           +  GE+F  G    G+LG G   ++  +    LI+ L+ +    VACG  H  A+     
Sbjct: 737 SAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKS--VACGPNHMLAIADYNP 794

Query: 313 ----RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
               + G  Y+WG      G LG GSK    +P+K+    +      ++CG   +  +T 
Sbjct: 795 DHPIKDGMCYSWGRNW--KGQLGIGSKEDSNVPKKIHNAKE--RFKKVACGQDFSIGLTY 850

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
              ++ +G+  +            IP+ ++ L   +   ++C     + +          
Sbjct: 851 GNQVYLWGNNKYFCDSKITK-DVDIPQLLQALEQAQIKDIACSYKFCSVL---------- 899

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA----PL--IDENICQVACGHDLSV 482
                  G++  WG     R+    K+ +     +A    P+   D  +  ++ G + S 
Sbjct: 900 ----NDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSA 955

Query: 483 ALTTSGHVYTMGSAAYGQLGV 503
           A++    +YT G A  G+LG+
Sbjct: 956 AVSVKRSLYTWGHAEGGRLGL 976


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 215/446 (48%), Gaps = 67/446 (15%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 1151 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 1198

Query: 261  KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 1199 VEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 1258

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 1259 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGL 1315

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 1316 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 1363

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G   
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGD 1423

Query: 498  YGQLGVP--------VADG---------LVPTRVDGEIAESFVEEVACGAYHVAALTS-- 538
            +G+L           V+D          L+P    G ++   +     G    + ++S  
Sbjct: 1424 FGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFC 1483

Query: 539  ---------TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
                       +VY WG   +GQ G+G       PTLV  L+ +++ RV CG + +    
Sbjct: 1484 GQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV--- 1540

Query: 590  LHKWVSSVDHSVCSSCHNPFGFRRKR 615
               W ++VD +   S H P  F+  R
Sbjct: 1541 --AW-TTVDVA-APSAHEPVLFQTAR 1562



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 2171 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2220

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V V+ VA   G  H  A++  G++Y
Sbjct: 2221 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVY 2280

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR V  +L GI +  I+ G  H+A +T AG L+++G G
Sbjct: 2281 SWGEA--EDGKLGHGNRSPCDRPRVVE-SLRGIEVVDIAAGGAHSACITVAGDLYSWGKG 2337

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT------------V 2385

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 2386 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 2445

Query: 499  GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 2446 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 2504

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K++ RV CG
Sbjct: 2505 TNAIQRPRLVAALQGKKINRVACG 2528



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G ++               +D   PQL++ L+
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYV----------QAYNSDTLGPQLVQGLA 196

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  VA     +H  A+  +G++++WG G  + G LGHG  V    P+ +S   G   
Sbjct: 197 SRNIVKVAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 254

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   VS
Sbjct: 255 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 314

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 315 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 362

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           +I +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  V+ VA 
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD-VAA 421

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K +  + CG
Sbjct: 422 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + V  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P+++E 
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 2306

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  +A G  H+  +T +GDLY+WG G Y  G LGHG       P+ V   L G  
Sbjct: 2307 LRGIEVVDIAAGGAHSACITVAGDLYSWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 2363

Query: 353  LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 2364 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 2423

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 2424 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2469

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    +  VACG+
Sbjct: 2470 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGS 2529

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK    GK
Sbjct: 2530 AHTLAW-STSKPANAGK 2545



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185  VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
            V+ +S G       S G+V+ WGE   +G LG G          ++    P+ VES   +
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEA-EDGKLGHGN---------RSPCDRPRVVESLRGI 2310

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            +V +IA G  H+  +T  G+++SWG+   GRLGHG   D   P+L+E L G  V  +AC 
Sbjct: 2311 EVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 2370

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
             G+  T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQF 2427

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  +T +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H        
Sbjct: 2428 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC---- 2483

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G+++TWGD D+G+LG G       P  VA L  + I +VACG   ++
Sbjct: 2484 ----------TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 2533

Query: 483  ALTTS 487
            A +TS
Sbjct: 2534 AWSTS 2538



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 170/346 (49%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +Y     
Sbjct: 129 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQ--- 180

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            YNS  LG    V     R   KV+ + DG H  Y++        + + G +F++G G  
Sbjct: 181 AYNSDTLGP-QLVQGLASRNIVKVAAHSDGHH--YLA--------LAATGEVFSWGCGDG 229

Query: 381 GALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +  L G +  +    ++CG  ++AA+              T+ G
Sbjct: 230 GRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAI--------------TAEG 275

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E +  P  V  L    +  V+CG     ++A+T +G V++ G
Sbjct: 276 ELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 335

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  + +V CG+    ALT   +VY+WGKG N +LG
Sbjct: 336 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 395

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 396 HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 441



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 124/251 (49%), Gaps = 26/251 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA+ +T
Sbjct: 1201 GKVYACGEA-TNGRLGLGISSGTVPLPRQITALSNYVVKKVA---VHS---GGRHAMALT 1253

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 1254 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 1313

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 1314 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1370

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             FG LG G     ++P+ +E L G    ++ CG   + A+              T  G +
Sbjct: 1371 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 1416

Query: 439  FTWGDGDKGRL 449
            +TWG GD G L
Sbjct: 1417 WTWGRGDFGEL 1427



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 53/314 (16%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WGEG  +G LG         FSR  +   P+ +E+     + +IACG+ H+  +T
Sbjct: 1256 GKVFSWGEG-DDGKLG--------HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAAIT 1305

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG    GRLGHG       P+++++L G  V  VACG  +  T A+T  G ++
Sbjct: 1306 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 1365

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG +  G LG G    C +P+ +   L+G  +  I CG   +  +T +G ++T+G G
Sbjct: 1366 SWGDGDF--GKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGRG 1422

Query: 379  SFGALGHGDHISTS----------------IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             FG L    HI  S                IP       GL + R           +V  
Sbjct: 1423 DFGELRPDSHIVQSGNVSDRMRVRNKGACLIPL---PFFGLVSPR------EMGWEIVGI 1473

Query: 423  DSSSSSPSGSTSCGK----------LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            + +S     S+ CG+          ++ WGD D G+ G+G       P  V  L  + I 
Sbjct: 1474 ERNSGI---SSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 1530

Query: 473  QVACGHDLSVALTT 486
            +VACG   SVA TT
Sbjct: 1531 RVACGSSHSVAWTT 1544



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 25/304 (8%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           V++ S G  +    + G+VF WG G   G LG G+  V     +   AL  K        
Sbjct: 203 VAAHSDGHHYLALAATGEVFSWGCG-DGGRLGHGD-TVPLEEPKMISALSGKQAGK---- 256

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  V+C 
Sbjct: 257 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 316

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 373

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 374 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLAL---- 429

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T   ++ +WG  D+ +     +  +  P  +  L  ++I  +ACG   S 
Sbjct: 430 ----------TEDSEVHSWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSF 479

Query: 483 ALTT 486
           A ++
Sbjct: 480 AWSS 483



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 310  AVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A T    ++ WG  D     GL G   KV  +     S  L  +++  ++ G      VT
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 1198

Query: 368  SAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
              G ++  G+ + G LG G    T  +PR++  L      +V+       A+ +  D   
Sbjct: 1199 VEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVD--- 1255

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                     GK+F+WG+GD G+LGH  +     P  +  L  + I  +ACG   S A+T+
Sbjct: 1256 ---------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS 1306

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAY--HVAALTSTS 540
            SG +YT G   YG+LG     G   T++  ++ +      V +VACG+      ALT   
Sbjct: 1307 SGELYTWGLGEYGRLG----HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1362

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             V++WG G  G+LG G  +  N P  ++ L  + V ++ CG  F+
Sbjct: 1363 LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 1407



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 127/272 (46%), Gaps = 42/272 (15%)

Query: 173  AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
            A +T RI    +   SSH +A     S G+++ WG G   G LG G++         T  
Sbjct: 1285 ALKTKRIR--DIACGSSHSAA---ITSSGELYTWGLG-EYGRLGHGDN---------TTQ 1329

Query: 233  LLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
            L PK V+  +   V  +ACG+R A  + +T +G +FSWG+   G+LG G     + PQ I
Sbjct: 1330 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI 1389

Query: 291  EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY-----NSGLLGHGS---------KV 336
            E L+G  V  + CG   + A+T+SG ++TWG G +     +S ++  G+         K 
Sbjct: 1390 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKG 1449

Query: 337  SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS-----------AGHLFTFGDGSFGALGH 385
            +C IP    G +    + +   G+   + ++S              ++ +GD   G  G+
Sbjct: 1450 ACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGN 1509

Query: 386  GDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G       P  V+ L G + TRV+CG  H+ A
Sbjct: 1510 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1541



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 1202

Query: 490  VYTMGSAAYGQLGVPVADGLVP-TRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 1203 VYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1262

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A I     L+ W
Sbjct: 1263 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 1313



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 2170 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 2224

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 2225 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFVKKVAVNSGGKHCLA 2272

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  V  L    +  +A G   S  +T +G +Y
Sbjct: 2273 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLY 2332

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            + G   YG+LG   ++  +  ++   +    V ++ACG+       LT    V++WG G 
Sbjct: 2333 SWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2392

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2431



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 2170 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 2219

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    + +VA   G    +AL++
Sbjct: 2220 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSS 2275

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V ++A G  H A +T    +Y+WG
Sbjct: 2276 EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWG 2335

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGHGD +++  P LV+ L+  +V  + CG      +CL
Sbjct: 2336 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 2379


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 187/367 (50%), Gaps = 42/367 (11%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ-GE 264
           WG G  +G LG G+           D L P  + +    +V ++ CGA H    ++   +
Sbjct: 40  WGRG-EDGQLGHGD---------AEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQ 89

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG             D+  PQ I+ L G+ ++ +ACG+ H  AVT  G++ +WG   
Sbjct: 90  VYSWG------------CDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWG--R 135

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+     G+ +  ++ G  HTA VT  G L+ +G G +G LG
Sbjct: 136 NQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLG 194

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     +P +V T+ G++  +V+CG  HT +V              +S G L+T+G  
Sbjct: 195 LGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV--------------SSSGGLYTYGWS 240

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
             G+LGHGD E  L P  +  L +  I +++ G   ++ALT+ G +Y  G   +GQ+GV 
Sbjct: 241 KYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 300

Query: 504 PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
              D   P +V     E  V  ++CG  H  A+T    V++WG+G NGQLGHG+  +RN 
Sbjct: 301 DNVDHCSPVQVKFP-HEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNI 359

Query: 564 PTLVDFL 570
           P +++ L
Sbjct: 360 PKMIEVL 366



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 168/342 (49%), Gaps = 32/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D   P  +  L G  V  V CG  HT
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 309 CAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S   +Y+WG                 + P+ +   L G+ +  I+CG  H   VT
Sbjct: 81  TAYSESFTQVYSWG--------------CDLFTPQPIKA-LHGLRIKQIACGDSHCLAVT 125

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G    + +P++++  +G+    V+ G  HTAAV         
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV--------- 176

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+L+ WG G  G LG GD+  RL PE V+ +    + +VACG   ++++++S
Sbjct: 177 -----TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSS 231

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D L P +++  + E+ + E++ G  H  ALTS  K+Y WG
Sbjct: 232 GGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYGWG 290

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               GQ+G GD  +  SP  V F  +++V  + CG   T  +
Sbjct: 291 WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAV 332



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D   P  V+      V +I+CG RH + VT++  +FSWG  + G+LGHG   D + P++
Sbjct: 303 VDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKM 362

Query: 290 IEILS 294
           IE+LS
Sbjct: 363 IEVLS 367


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 179/371 (48%), Gaps = 34/371 (9%)

Query: 202 DVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           ++F WG  I     LGG E           + L+P+ ++   A ++  IACG  + VL+T
Sbjct: 77  NMFCWGSTIHGELGLGGIEDE---------NILVPRELDFQKATEIEQIACGENYTVLIT 127

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G+++S G    G+LGH  E      QLI  L     + VACG +HT AV   G L++W
Sbjct: 128 RDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSW 185

Query: 321 GDGTYNSGLLGHGSK--VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G      G LG  SK  + C +P  V   L    +  ++CG+ H   +T+ G L+++G  
Sbjct: 186 GSNA--EGQLGLNSKNLIEC-VPHMVRA-LGTSVVVQVACGINHVLALTNNGKLYSWGSN 241

Query: 379 SFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           S G LG G  +   I P+ + +L G+    ++CG +H+ A+              +  G 
Sbjct: 242 SDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAI--------------SKSGA 287

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F WG    G+LG  D   R  P  +  L +  +C  ACG + SV LT  G V+T G+  
Sbjct: 288 VFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGM 347

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHG 556
           YGQLG       +  R   E+  S V +++CG  H   L  S  +VY WG G  GQLG+ 
Sbjct: 348 YGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNN 407

Query: 557 DKDNRNSPTLV 567
              +  +P +V
Sbjct: 408 ITRSVATPQVV 418



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 27/323 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   + ++  P+ ++      +E +ACGE +T  +TR G +Y+ G+
Sbjct: 78  MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             Y  G LGH  G K    IP      LD      ++CG  HT  V   G LF++G  + 
Sbjct: 138 NDY--GQLGHEKGRKRLQLIP-----GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAE 190

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG +  ++   +P  V  L      +V+CG+ H  A+              T+ GKL+
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLAL--------------TNNGKLY 236

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G D +  + P+ ++ L    I  + CG   S+A++ SG V+  G   +
Sbjct: 237 SWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTF 296

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GQLG+         R    +  + V   ACG      LT    V+T G G  GQLGHG+ 
Sbjct: 297 GQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNT 356

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
            N   P  V  L    V ++ CG
Sbjct: 357 SNEILPRQVMELMGSTVTQISCG 379



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 25/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +++ WG   +    LG     +  +PR++        +  I+CG  +T ++T  G +++ 
Sbjct: 77  NMFCWGSTIHGELGLGGIEDENILVPRELDFQ-KATEIEQIACGENYTVLITRDGQVYSC 135

Query: 376 GDGSFGALGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           G+  +G LGH  G      IP     L      +V+CG  HT AV               
Sbjct: 136 GNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKVACGAHHTLAV--------------N 177

Query: 434 SCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
             G+LF+WG   +G+LG   K      P  V  L    + QVACG +  +ALT +G +Y+
Sbjct: 178 EWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYS 237

Query: 493 MGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
            GS + GQLG+   V + + P ++   +A   +  + CG YH  A++ +  V+ WGK   
Sbjct: 238 WGSNSDGQLGLGTDVKNEIKP-KLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTF 296

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D  NRN P  +  L++ +V    CG  F+  +
Sbjct: 297 GQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFL 334


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 187/383 (48%), Gaps = 31/383 (8%)

Query: 203  VFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            V +WG  +    G L G + +V  +FS+    L P          +H IA G++   +V+
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------IH-IAGGSKSLFVVS 2961

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            + G++F+ GE + GRLG G   +V  P  + +L    V+ VA   G  H  A+T  G ++
Sbjct: 2962 QDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3021

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ +   PR V   L    +  I+CG  H+A ++S G L+T+G G
Sbjct: 3022 SWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D            G +
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTED------------GAV 3126

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y
Sbjct: 3127 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3186

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG      +   +    +    V  VA GA H  A+T   +VY WG   +GQ G G+ 
Sbjct: 3187 YRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNT 3246

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L    V RV CG
Sbjct: 3247 FVNKKPALVIGLDAVFVNRVACG 3269



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 169/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G VF  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 2964 GKVFACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 3014

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  +ACG  H+ A++  G+LYT
Sbjct: 3015 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYT 3074

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3075 WGLGEY--GRLGHGDNATQLKPKLVTA-LCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    ++ P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLAL--------------TRAGE 3177

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +A L    +  VA G    +A+T +G VY  G   
Sbjct: 3178 VWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3237

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3238 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSMA 3275



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T  GE+++WGE   G+LGHG       P+L+E
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE 4204

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4205 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4261

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4262 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4321

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4322 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4367

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + +G VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4368 KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4427

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4428 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDMAPEALHARLILLHHFS 4475

Query: 586  AIIC 589
             ++C
Sbjct: 4476 ELLC 4479



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK +E    + V +IACG+ H+  +T
Sbjct: 4176 GEVYAWGEG-EDGKLGHGNR---LSYDR------PKLLEHLNGMSVADIACGSAHSAAIT 4225

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4226 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4285

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4286 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H  A               +  G
Sbjct: 4343 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVAC--------------SDAG 4386

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4387 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 31/333 (9%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +  WG     +LG  + + V  P   + +S +    +A G      V++ G ++  G+GT
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS-----CGLWHTAVVTSAGHLFTFGDGS 379
              +G LG G   +  +P +    L  +H   +       G  H   +T  G +F++G+G 
Sbjct: 2974 --NGRLGLGVTHNVPLPHQ----LPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3027

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+  +   PR VE LR  +   ++CG  H+AA+              +S G+L+
Sbjct: 3028 DGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAI--------------SSQGELY 3073

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +L P+ V  L    + QVACG     ++ALT  G V++ G   
Sbjct: 3074 TWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGD 3133

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +G+LG   ++G         ++   V ++ CGA    ALT   +V+TWGKG   +LGHG 
Sbjct: 3134 FGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3193

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              +   P  +  L+ ++V  V  G    A+ CL
Sbjct: 3194 DQHVRKPQPIAGLRGRRVIHVAVG----ALHCL 3222



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 19/271 (7%)

Query: 169  DRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            D+    E  R   +  +   SSH +A     S G+++ WG G   G LG G++       
Sbjct: 3040 DKPRLVEALRAKKIRDIACGSSHSAA---ISSQGELYTWGLG-EYGRLGHGDN------- 3088

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
                 L PK V +     V  +ACG+R A  + +T+ G +FSWG+   G+LG G     +
Sbjct: 3089 --ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3146

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE LSG+ V  + CG   + A+TR+G+++TWG G Y    LGHG       P+ ++
Sbjct: 3147 TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR--LGHGGDQHVRKPQPIA 3204

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  + +++ G  H   VT AG ++ +GD   G  G G+      P  V  L  +  
Sbjct: 3205 G-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3263

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             RV+CG  H+ A  +   S      G    G
Sbjct: 3264 NRVACGSSHSMAWGLPNASPDEEKRGPVPFG 3294



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 147/314 (46%), Gaps = 34/314 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE---ILSGVNVELVA 302
           V  +AC     +L++K+G++++W         H  + D + PQ ++   I S   + + +
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNW---------HISKPD-TEPQPLDFGDIGSETFISIAS 646

Query: 303 -CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
            C   H  AV  + + Y+WG G  ++  LGHG   S  +P K+   +  +   Y  CG  
Sbjct: 647 HCEGRHFLAVDNNFNAYSWGTG--DNRRLGHGDCHSRELPTKIESLVRRVKSVY--CGCS 702

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++A +T  G+L+T+G G++G LGHG      +P  V  L+  +   V+ G          
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALG---------- 752

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
             S  +     T+ G ++ WGDGD G+LG+      L P  +  L    + +V  G   S
Sbjct: 753 --SGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL--PRVQRVFAGSQFS 808

Query: 482 VALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           +ALT  G +Y+ G A+    QL      G    R+   +    + +VA G  H  AL+S 
Sbjct: 809 LALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSA 868

Query: 540 SKVYTWGKGANGQL 553
            +++ WG+  N Q+
Sbjct: 869 GEIFGWGRNDNQQI 882



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 140/331 (42%), Gaps = 52/331 (15%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL--- 353
           +V+ VAC +     +++ G LY W           H SK     P      LD   +   
Sbjct: 596 HVKQVACSKDIVLLLSKEGKLYNW-----------HISK-----PDTEPQPLDFGDIGSE 639

Query: 354 SYIS----CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           ++IS    C   H   V +  + +++G G    LGHGD  S  +P ++E+L   R   V 
Sbjct: 640 TFISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVY 698

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  ++AA+ +               G L+TWG G+ GRLGHG  + +  P  V  L D 
Sbjct: 699 CGCSYSAAITLR--------------GNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDH 744

Query: 470 NICQVACGHD--LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEV 526
            +  VA G     ++ LT  G VY  G   YG+LG       L P  ++       V+ V
Sbjct: 745 QVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIE---CLPRVQRV 801

Query: 527 ACGAYHVAALTSTSKVYTWGKGA--NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
             G+    ALT   ++Y+WGK +    QL   +    + P L+  L+ K++  V  G+  
Sbjct: 802 FAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTH 861

Query: 585 TAIIC----LHKWVSSVDHSVC--SSCHNPF 609
              +     +  W  + +  +C  S C  P 
Sbjct: 862 CLALSSAGEIFGWGRNDNQQICPASVCSEPL 892



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 134/298 (44%), Gaps = 45/298 (15%)

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
           P T   P +  D  S  ETF IS++S        +   +F++    + WG G  N  LG 
Sbjct: 624 PDTEPQPLDFGDIGS--ETF-ISIASHCEGRHFLAVDNNFNA----YSWGTG-DNRRLGH 675

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           G+       SR+    LP  +ES +   V ++ CG  ++  +T +G +++WG  + GRLG
Sbjct: 676 GD-----CHSRE----LPTKIES-LVRRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLG 725

Query: 278 HGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
           HG   D   P ++  L    V  VA   G+ HT  +T  G +Y WGDG Y  G LG+ S 
Sbjct: 726 HGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY--GKLGNASC 783

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG----DHIST 391
            S   P  +        +  +  G   +  +T  G L+++G  S   LGH     +    
Sbjct: 784 NSSLQPLLIECL---PRVQRVFAGSQFSLALTGEGQLYSWGKAS--CLGHQLVERNVQGC 838

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           S+PR + +L+  R   V+ GV H  A+              +S G++F WG  D  ++
Sbjct: 839 SVPRLITSLQHKRIVDVAVGVTHCLAL--------------SSAGEIFGWGRNDNQQI 882



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 20/209 (9%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG GD  RLGHGD   R  P  +  L+   +  V CG   S A+T  G++YT G   Y
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIESLV-RRVKSVYCGCSYSAAITLRGNLYTWGRGNY 721

Query: 499 GQLGVPVADG-LVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGH 555
           G+LG  ++D   +PT V   + +  V +VA G+   H   LT+   VY WG G  G+LG+
Sbjct: 722 GRLGHGISDDQCLPTMVMA-LKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW--VSSVDHSV-------C 602
              ++   P L++ L   +V+RV  G  F+  +     L+ W   S + H +       C
Sbjct: 781 ASCNSSLQPLLIECL--PRVQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGC 838

Query: 603 SSCHNPFGFRRKRHNCYNCGLVFCKACSS 631
           S        + KR      G+  C A SS
Sbjct: 839 SVPRLITSLQHKRIVDVAVGVTHCLALSS 867



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4069 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4118

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4119 ------TPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4172

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4173 TTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLT 4232

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4233 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4278



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 8/177 (4%)

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            +TA+ ++A  +    P        +  WG  DK +LG         P     +       
Sbjct: 2896 NTASELLAASAEQDVPC------TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH 2949

Query: 474  VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAY 531
            +A G      ++  G V+  G    G+LG+ V   +        + +  V++VA   G  
Sbjct: 2950 IAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3009

Query: 532  HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H  ALT   KV++WG+G +G+LGHG++   + P LV+ L+ K+++ + CG + +A I
Sbjct: 3010 HALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAI 3066


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 169/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  +SCG +H+  ++ A  +F++G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +VSCG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVSCGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QV+CG+  S+AL+ +  V++ G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|296086391|emb|CBI31980.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/206 (53%), Positives = 135/206 (65%), Gaps = 13/206 (6%)

Query: 672 SVVQSPRNRTGNVNHKTAELADREAQGPRLQDQLSILSSFDSNKQTESRLSKQNLKLELQ 731
           SV++ P+ R+ N+  K+ E+A+R+  GPR+Q QLS LSS DS  + ES+  K + KLE  
Sbjct: 5   SVLRIPKARSSNILQKSNEIAERDTMGPRVQGQLSRLSSVDSFSRAESKHYKCDTKLEFN 64

Query: 732 DNHVYP-VNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATSPVSGKSSS--- 787
           D  V P +N N+Q G  +S K S  L   S+K FSAS   SR+ S ATSPVSGKSS    
Sbjct: 65  DARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRATSPVSGKSSPPQS 124

Query: 788 ---------ARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLK 838
                     RS   T DD K  NDSL++EII LRAQVE LT KS+ LEAELER+S++LK
Sbjct: 125 AMLAASLAVVRSPEATDDDPKHTNDSLSREIINLRAQVENLTGKSQILEAELERSSRKLK 184

Query: 839 TVTAIAEDEAEKCKTANEVIKSLTVQ 864
            VTA+AE EAEKCK A EVIKSLT Q
Sbjct: 185 EVTAVAEGEAEKCKAAKEVIKSLTAQ 210


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 186/368 (50%), Gaps = 33/368 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST-MALDVHNIACGARHAVLVTK 261
           +F WG+  + G LG GE       + Q     P+ +E+   + +V  ++CG  H   + K
Sbjct: 1   MFCWGK-CSEGQLGVGE-------TEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCK 52

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G +++ G    G+LG  +E   ++P+ +  +    +  V CG+ HT AV+  G ++ WG
Sbjct: 53  DGTVYTCGSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWG 110

Query: 322 DGTYNSGLLGHGSKVS---CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           D +Y  G +G GSKV      IP+ + G L  + +  I+CG  H+  +T +GHLF +GD 
Sbjct: 111 DNSY--GQIGLGSKVKEKVQTIPKMLKG-LAKMSVVQIACGCNHSMALTISGHLFCWGDN 167

Query: 379 SFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           S G LG G  H S S P  V +L G+    +S G  H+ A+              +S G 
Sbjct: 168 SSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL--------------SSSGA 213

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LF WG  + G+LG  D   R  P  +  L  + +C V+CG   +  LT+ G V+T G   
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGT 273

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQLGHG 556
            GQLG          R   E+  S V ++ACG  H  AL  +S +VYT+G+G +GQLG G
Sbjct: 274 SGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333

Query: 557 DKDNRNSP 564
             +N NSP
Sbjct: 334 VTNNCNSP 341



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 160/325 (49%), Gaps = 28/325 (8%)

Query: 265 IFSWGEESGGRLGHGR--EADVSHPQLIEILS-GVNVELVACGEYHTCAVTRSGDLYTWG 321
           +F WG+ S G+LG G   +  +S P+L+E L    NV  V+CG  HT  + + G +YT G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              +  G LG   + S   P  V   ++   ++ ++CG  HT  V+  G +F +GD S+G
Sbjct: 61  SNEF--GQLGQ--EKSHTNPESVHA-IETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115

Query: 382 ALGHGDHIS---TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G G  +     +IP+ ++ L  +   +++CG  H+ A+ ++              G L
Sbjct: 116 QIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTIS--------------GHL 161

Query: 439 FTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           F WGD   G+LG G     +  P  V  L       ++ G   S AL++SG ++  G   
Sbjct: 162 FCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNE 221

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           YGQLGV    D  +PT +    ++  V  V+CG  H A LTS   V+T+G G +GQLGH 
Sbjct: 222 YGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHN 280

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
              +  +P  V  L    V ++ CG
Sbjct: 281 SNHHEYTPRKVFELMGSVVTQIACG 305



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 133/279 (47%), Gaps = 26/279 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           ++ WG  +   G LG G     +I  PR +       ++  +SCG  HTA +   G ++T
Sbjct: 1   MFCWGKCS--EGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYT 58

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            G   FG LG     S + P  V  +     T+V+CG  HT AV              + 
Sbjct: 59  CGSNEFGQLGQEK--SHTNPESVHAIETFTITKVTCGKAHTVAV--------------SD 102

Query: 435 CGKLFTWGDGDKGRLGHGDK---EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            G +F WGD   G++G G K   + +  P+ +  L   ++ Q+ACG + S+ALT SGH++
Sbjct: 103 QGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLF 162

Query: 492 TMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
             G  + GQLG+      +  P  V       F+  ++ G  H  AL+S+  ++ WGK  
Sbjct: 163 CWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFML-ISAGGAHSFALSSSGALFGWGKNE 221

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            GQLG  D  +R  PTL+  L+ + V  V CG   TA++
Sbjct: 222 YGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVL 260


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 170/336 (50%), Gaps = 17/336 (5%)

Query: 248  NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GE 305
            +IA G++   +V++ G++++ GE + GRLG G   +V  P  + +L    V+ VA   G 
Sbjct: 769  HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 828

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H  A+T  G +++WG+G    G LGHG++ +   PR V   L    +  ++CG  H+A 
Sbjct: 829  KHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAA 885

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            ++S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D  
Sbjct: 886  ISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTED-- 943

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                      G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT
Sbjct: 944  ----------GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 993

Query: 486  TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
             +G V+T G   Y +LG      +   +  G +    V  VA GA H  A+T   +VY W
Sbjct: 994  RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 1053

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G   +GQ G G+      P LV  L    V RV CG
Sbjct: 1054 GDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 1089



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 1872 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 1931

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 1932 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 1988

Query: 352  HLSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 1989 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 2048

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 2049 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 2094

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 2095 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 2154

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 2155 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 2202

Query: 586  AIIC 589
             ++C
Sbjct: 2203 ELVC 2206



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 168/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+    + VH+   G +HA+ +
Sbjct: 784  GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKK---VAVHS---GGKHALAL 834

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 835  TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 894

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 895  WGLGEY--GRLGHGDNATQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 952  GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL--------------TRAGE 997

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 998  VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 1057

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 1058 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 1095



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    + V +IACG+ H+  +T
Sbjct: 1903 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMSVADIACGSAHSAAIT 1952

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 1953 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 2012

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 2013 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 2070 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 2113

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 2114 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 126/271 (46%), Gaps = 19/271 (7%)

Query: 169  DRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            D+    E  R   +  V   SSH +A     S G+++ WG G   G LG G++       
Sbjct: 860  DKPRLVEALRAKKIRDVACGSSHSAA---ISSQGELYTWGLG-EYGRLGHGDN------- 908

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
                 L PK V +     V  +ACG+R A  + +T+ G +FSWG+   G+LG G      
Sbjct: 909  --ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 966

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  IE LSG+ V  + CG   + A+TR+G+++TWG G Y    LGHG       P+ + 
Sbjct: 967  TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR--LGHGGDQHVRKPQPI- 1023

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  + +++ G  H   VT AG ++ +GD   G  G G+      P  V  L  +  
Sbjct: 1024 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 1083

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             RV+CG  H+ A  +   S+     G    G
Sbjct: 1084 NRVACGSSHSIAWGLPNASTDEEKRGPVPFG 1114



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 17/255 (6%)

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           GSKV      +    L  IH++  S  L+   +V+  G ++  G+G+ G LG G   +  
Sbjct: 750 GSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVSQDGKVYACGEGTNGRLGLGVTHNVP 806

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
           +P ++  L      +V+       A+ +  D            GK+F+WG+G+ G+LGHG
Sbjct: 807 LPHQLPVLHQYVVKKVAVHSGGKHALALTLD------------GKVFSWGEGEDGKLGHG 854

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
           ++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG       +  
Sbjct: 855 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 914

Query: 513 RVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  ++P  ++ L
Sbjct: 915 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 974

Query: 571 KDKQVKRVVCGLNFT 585
               V ++ CG  F+
Sbjct: 975 SGIGVVQIECGAQFS 989



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 7/183 (3%)

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           AV  A + + ++P     C  +  WG  DK +LG         P     +       +A 
Sbjct: 714 AVSTAHEEAGAAPEQDLPC-TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG 772

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVA 534
           G      ++  G VY  G    G+LG+ V   +        + +  V++VA   G  H  
Sbjct: 773 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 832

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----L 590
           ALT   KV++WG+G +G+LGHG++   + P LV+ L+ K+++ V CG + +A I     L
Sbjct: 833 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 892

Query: 591 HKW 593
           + W
Sbjct: 893 YTW 895



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 1796 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 1845

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 1846 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 1899

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 1900 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLT 1959

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 1960 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 2005


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 189/393 (48%), Gaps = 42/393 (10%)

Query: 198 DSLGDVFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARH 255
           D    VF+WG    +  G L G +H+             P A +    L V  +  G++ 
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSKHKT------------PVASKDLQRLKVTQVIGGSKS 474

Query: 256 AVLVTKQGEIFSWGEESGGRLGHG-------READVSHPQLIEILSGVNVELVACGEYHT 308
              VT  G++++ GE + GRLG G       R   V  PQ I+ L+      V  G  H 
Sbjct: 475 LFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHA 528

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T  G +Y+WGDG    G LGHGS+     PRK+    +   +  ISCG  H+A + S
Sbjct: 529 MALTYDGHVYSWGDG--EEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGS 585

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G L+T+G G +G LGHG++ +   P+ V+ L G +  +V+CG      + +  D     
Sbjct: 586 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQD----- 640

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                  G +++WGDGD G+LG G  +    P+ V  L  +++ ++ CG   S+AL+  G
Sbjct: 641 -------GLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCG 693

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            V+T G   Y +LG      +   +V   + E  V +VA GA H  A+T   +V+ WG  
Sbjct: 694 LVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDN 753

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            +GQ G+G       P  V  L+  ++ ++ CG
Sbjct: 754 DHGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 786



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 182/383 (47%), Gaps = 23/383 (6%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G +F WG     G LGG E              +P    S  AL    +  G +    VT
Sbjct: 1407 GSIFGWGHN-HRGQLGGPE---------GAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1456

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA--CGEYHTCAVTRSGDLY 318
             +G++F+ G  +GGRLG G    V+ P LIE +  V++  V+   G  H  A++  G++Y
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1516

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ S   PR +  +L G  +  ++ G  H+A + + G L+T+G G
Sbjct: 1517 SWGEGV--DGKLGHGNRSSLDHPRIIE-SLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ V  L+      V+CG      + +   +  SS         +
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSS--------VV 1625

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L+ ++I  VACG   S+AL+ +G VYT G   Y
Sbjct: 1626 WSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDY 1685

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    + +   ++   +    V EV+ G+ H  A      VYTWG    GQ+G G  
Sbjct: 1686 YRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTT 1745

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L+   +  V CG
Sbjct: 1746 QATQIPRLVAALQGHHISHVSCG 1768



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 168/343 (48%), Gaps = 30/343 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   +G LG G   V  S SR T  L P+ ++    L VH+   G RHA+ +T
Sbjct: 482 GKVYACGES-TSGRLGLGP--VTGSVSRLTQVLFPQPIKK---LAVHS---GGRHAMALT 532

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G ++SWG+   G+LGHG  AD   P+ IE      +  ++CG  H+ A+  SG LYTW
Sbjct: 533 YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTW 592

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG+  +   P+ V   L G  +  ++CG     T  +T  G ++++GDG
Sbjct: 593 GHGMY--GRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDG 649

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G      +P+ VE L G    ++ CG   + A+              + CG +
Sbjct: 650 DFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL--------------SRCGLV 695

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG GD  RLGHG  +    P+ V  L +  +  VA G    +A+T  G V+  G   +
Sbjct: 696 WTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDH 755

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           GQ G         P +V G +    + ++ACG+ H  A   TS
Sbjct: 756 GQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFADTS 797



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 31/351 (8%)

Query: 207  GEG--IANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA--CGARHAVLVTKQ 262
            GEG   A G+  GG   +G + S      +P  +ES   + +  ++   G +H + ++ +
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNES----VAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1512

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            GE++SWGE   G+LGHG  + + HP++IE L G  +  VA G  H+ A+  +G LYTWG 
Sbjct: 1513 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1572

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG------LWHTAVVTSAGHLFTFG 376
            G Y  G LGH        P+ V+   D + +  ++CG      L  T     +  ++++G
Sbjct: 1573 GRY--GRLGHEDSEDQLKPKLVNALKDNLVVD-VACGNGDAQTLCITEGTGGSSVVWSWG 1629

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG +G LG G      +P  ++TL G   T V+CG   + A+              +  G
Sbjct: 1630 DGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLAL--------------SKAG 1675

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
             ++TWG GD  RLGHG  E    P+ +  L    + +V+ G    +A   +G VYT G  
Sbjct: 1676 GVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDN 1735

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
              GQ+G          R+   +    +  V+CG+ H  A +  S+ +   K
Sbjct: 1736 DEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHK 1786



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 29/291 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G   G LG G          + DAL P+ +E+     + +I+CG+ H+  + 
Sbjct: 535 GHVYSWGDG-EEGKLGHGS---------RADALTPRKIETFPEKCIRDISCGSSHSAAIG 584

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
             G +++WG    GRLGHG    +  P+ ++ LSG  V  VACG  +  T  +T+ G +Y
Sbjct: 585 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 644

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG +  G LG G    C +P+ V   L G  +  I CG   +  ++  G ++T+G G
Sbjct: 645 SWGDGDF--GKLGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWGKG 701

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +  LGHG       P+ VE LR  +   V+ G  H  AV              T  G++
Sbjct: 702 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAV--------------TEGGQV 747

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           F WGD D G+ G+G       P  V  L    I ++ACG   S+A   + H
Sbjct: 748 FAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 798



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 26/331 (7%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           ++F WG     +LG  + +    P   + L  + V  V  G     AVT  G +Y  G+ 
Sbjct: 431 KVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 490

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNL-DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           T  SG LG G  V+  + R         I    +  G  H   +T  GH++++GDG  G 
Sbjct: 491 T--SGRLGLGP-VTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 547

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHG       PR++ET        +SCG  H+AA+               S G L+TWG
Sbjct: 548 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAI--------------GSSGTLYTWG 593

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQ 500
            G  GRLGHG+    L P+ V  L  + + QVACG     ++ LT  G VY+ G   +G+
Sbjct: 594 HGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGK 653

Query: 501 LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG   +DG  VP  V+  ++   V ++ CGA    AL+    V+TWGKG   +LGHG   
Sbjct: 654 LGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQ 712

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +   P +V+ L++ +V  V  G    A+ CL
Sbjct: 713 HVRRPQVVEGLREHKVVDVAVG----ALHCL 739



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 25/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG ++ WG    + G LG   G+KV   IP      L  I L      L+    VT  G 
Sbjct: 1406 SGSIFGWGHN--HRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLF---TVTGEGK 1460

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +F  G G+ G LG G + S +IP  +E+++ +  T+VS        + ++ +        
Sbjct: 1461 VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE-------- 1512

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                G++++WG+G  G+LGHG++     P  +  L  + I +VA G   S A+  +G +Y
Sbjct: 1513 ----GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLY 1568

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST------SKVYTW 545
            T G   YG+LG   ++  +  ++   + ++ V +VACG      L  T      S V++W
Sbjct: 1569 TWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSW 1628

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            G G  G+LG G  D    P ++D L  K +  V CG  F+
Sbjct: 1629 GDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFS 1668



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 21/265 (7%)

Query: 166  NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            +S D     E+ R  L  +V  ++ GS     ++ G ++ WG+G           R+G+ 
Sbjct: 1532 SSLDHPRIIESLRGDL--IVKVATGGSHSAAINATGGLYTWGKGRYG--------RLGHE 1581

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA-VLVTKQGE-----IFSWGEESGGRLGHG 279
             S   D L PK V +     V ++ACG   A  L   +G      ++SWG+   G+LG G
Sbjct: 1582 DSE--DQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1639

Query: 280  READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
                   P +I+ L G ++  VACG   + A++++G +YTWG G Y    LGHGS     
Sbjct: 1640 GSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR--LGHGSDEHVR 1697

Query: 340  IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
             P+ +  +L G+ +  +S G  H       G ++T+GD   G +G G   +T IPR V  
Sbjct: 1698 RPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAA 1756

Query: 400  LRGLRTTRVSCGVWHTAAVVVATDS 424
            L+G   + VSCG  HT A  + ++S
Sbjct: 1757 LQGHHISHVSCGSAHTVAWSLPSES 1781



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G +F +G    G LG  +     IP    +L  L+  ++  G      V          
Sbjct: 1406 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTV---------- 1455

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTT 486
                T  GK+F  G G  GRLG G  E    P  +  +   +I QV+   G    +AL+ 
Sbjct: 1456 ----TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSN 1511

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G    G+LG      L   R+   +    + +VA G  H AA+ +T  +YTWG
Sbjct: 1512 EGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWG 1571

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ LKD  V  V CG      +C+
Sbjct: 1572 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1615


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 189/393 (48%), Gaps = 42/393 (10%)

Query: 198 DSLGDVFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARH 255
           D    VF+WG    +  G L G +H+             P A +    L V  +  G++ 
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSKHKT------------PVASKDLQRLKVTQVIGGSKS 473

Query: 256 AVLVTKQGEIFSWGEESGGRLGHG-------READVSHPQLIEILSGVNVELVACGEYHT 308
              VT  G++++ GE + GRLG G       R   V  PQ I+ L+      V  G  H 
Sbjct: 474 LFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHA 527

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T  G +Y+WGDG    G LGHGS+     PRK+    +   +  ISCG  H+A + S
Sbjct: 528 MALTYDGHVYSWGDG--EEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGS 584

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G L+T+G G +G LGHG++ +   P+ V+ L G +  +V+CG      + +  D     
Sbjct: 585 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQD----- 639

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                  G +++WGDGD G+LG G  +    P+ V  L  +++ ++ CG   S+AL+  G
Sbjct: 640 -------GLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCG 692

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            V+T G   Y +LG      +   +V   + E  V +VA GA H  A+T   +V+ WG  
Sbjct: 693 LVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDN 752

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            +GQ G+G       P  V  L+  ++ ++ CG
Sbjct: 753 DHGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 785



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 182/383 (47%), Gaps = 23/383 (6%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G +F WG     G LGG E              +P    S  AL    +  G +    VT
Sbjct: 1406 GSIFGWGHN-HRGQLGGPE---------GAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1455

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA--CGEYHTCAVTRSGDLY 318
             +G++F+ G  +GGRLG G    V+ P LIE +  V++  V+   G  H  A++  G++Y
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1515

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ S   PR +  +L G  +  ++ G  H+A + + G L+T+G G
Sbjct: 1516 SWGEGV--DGKLGHGNRSSLDHPRIIE-SLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ V  L+      V+CG      + +   +  SS         +
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSS--------VV 1624

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L+ ++I  VACG   S+AL+ +G VYT G   Y
Sbjct: 1625 WSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDY 1684

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG    + +   ++   +    V EV+ G+ H  A      VYTWG    GQ+G G  
Sbjct: 1685 YRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTT 1744

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L+   +  V CG
Sbjct: 1745 QATQIPRLVAALQGHHISHVSCG 1767



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 168/343 (48%), Gaps = 30/343 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   +G LG G   V  S SR T  L P+ ++    L VH+   G RHA+ +T
Sbjct: 481 GKVYACGES-TSGRLGLGP--VTGSVSRLTQVLFPQPIKK---LAVHS---GGRHAMALT 531

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G ++SWG+   G+LGHG  AD   P+ IE      +  ++CG  H+ A+  SG LYTW
Sbjct: 532 YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTW 591

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG+  +   P+ V   L G  +  ++CG     T  +T  G ++++GDG
Sbjct: 592 GHGMY--GRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDG 648

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G      +P+ VE L G    ++ CG   + A+              + CG +
Sbjct: 649 DFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL--------------SRCGLV 694

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG GD  RLGHG  +    P+ V  L +  +  VA G    +A+T  G V+  G   +
Sbjct: 695 WTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDH 754

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           GQ G         P +V G +    + ++ACG+ H  A   TS
Sbjct: 755 GQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFADTS 796



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 31/351 (8%)

Query: 207  GEG--IANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA--CGARHAVLVTKQ 262
            GEG   A G+  GG   +G + S      +P  +ES   + +  ++   G +H + ++ +
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNES----VAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1511

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            GE++SWGE   G+LGHG  + + HP++IE L G  +  VA G  H+ A+  +G LYTWG 
Sbjct: 1512 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1571

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG------LWHTAVVTSAGHLFTFG 376
            G Y  G LGH        P+ V+   D + +  ++CG      L  T     +  ++++G
Sbjct: 1572 GRY--GRLGHEDSEDQLKPKLVNALKDNLVVD-VACGNGDAQTLCITEGTGGSSVVWSWG 1628

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            DG +G LG G      +P  ++TL G   T V+CG   + A+              +  G
Sbjct: 1629 DGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLAL--------------SKAG 1674

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
             ++TWG GD  RLGHG  E    P+ +  L    + +V+ G    +A   +G VYT G  
Sbjct: 1675 GVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDN 1734

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
              GQ+G          R+   +    +  V+CG+ H  A +  S+ +   K
Sbjct: 1735 DEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHK 1785



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 29/291 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G   G LG G          + DAL P+ +E+     + +I+CG+ H+  + 
Sbjct: 534 GHVYSWGDG-EEGKLGHGS---------RADALTPRKIETFPEKCIRDISCGSSHSAAIG 583

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
             G +++WG    GRLGHG    +  P+ ++ LSG  V  VACG  +  T  +T+ G +Y
Sbjct: 584 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 643

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG +  G LG G    C +P+ V   L G  +  I CG   +  ++  G ++T+G G
Sbjct: 644 SWGDGDF--GKLGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWGKG 700

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +  LGHG       P+ VE LR  +   V+ G  H  AV              T  G++
Sbjct: 701 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAV--------------TEGGQV 746

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           F WGD D G+ G+G       P  V  L    I ++ACG   S+A   + H
Sbjct: 747 FAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 797



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 157/331 (47%), Gaps = 26/331 (7%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           ++F WG     +LG  + +    P   + L  + V  V  G     AVT  G +Y  G+ 
Sbjct: 430 KVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGES 489

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNL-DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           T  SG LG G  V+  + R         I    +  G  H   +T  GH++++GDG  G 
Sbjct: 490 T--SGRLGLGP-VTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 546

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHG       PR++ET        +SCG  H+AA+               S G L+TWG
Sbjct: 547 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAI--------------GSSGTLYTWG 592

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQ 500
            G  GRLGHG+    L P+ V  L  + + QVACG     ++ LT  G VY+ G   +G+
Sbjct: 593 HGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGK 652

Query: 501 LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG   +DG  VP  V+  ++   V ++ CGA    AL+    V+TWGKG   +LGHG   
Sbjct: 653 LGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQ 711

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +   P +V+ L++ +V  V  G    A+ CL
Sbjct: 712 HVRRPQVVEGLREHKVVDVAVG----ALHCL 738



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 25/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG ++ WG    + G LG   G+KV   IP      L  I L      L+    VT  G 
Sbjct: 1405 SGSIFGWGHN--HRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLF---TVTGEGK 1459

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            +F  G G+ G LG G + S +IP  +E+++ +  T+VS        + ++ +        
Sbjct: 1460 VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE-------- 1511

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                G++++WG+G  G+LGHG++     P  +  L  + I +VA G   S A+  +G +Y
Sbjct: 1512 ----GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLY 1567

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST------SKVYTW 545
            T G   YG+LG   ++  +  ++   + ++ V +VACG      L  T      S V++W
Sbjct: 1568 TWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSW 1627

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            G G  G+LG G  D    P ++D L  K +  V CG  F+
Sbjct: 1628 GDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFS 1667



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 21/265 (7%)

Query: 166  NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            +S D     E+ R  L  +V  ++ GS     ++ G ++ WG+G           R+G+ 
Sbjct: 1531 SSLDHPRIIESLRGDL--IVKVATGGSHSAAINATGGLYTWGKGRYG--------RLGHE 1580

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA-VLVTKQGE-----IFSWGEESGGRLGHG 279
             S   D L PK V +     V ++ACG   A  L   +G      ++SWG+   G+LG G
Sbjct: 1581 DSE--DQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1638

Query: 280  READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
                   P +I+ L G ++  VACG   + A++++G +YTWG G Y    LGHGS     
Sbjct: 1639 GSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR--LGHGSDEHVR 1696

Query: 340  IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
             P+ +  +L G+ +  +S G  H       G ++T+GD   G +G G   +T IPR V  
Sbjct: 1697 RPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAA 1755

Query: 400  LRGLRTTRVSCGVWHTAAVVVATDS 424
            L+G   + VSCG  HT A  + ++S
Sbjct: 1756 LQGHHISHVSCGSAHTVAWSLPSES 1780



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G +F +G    G LG  +     IP    +L  L+  ++  G      V          
Sbjct: 1405 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTV---------- 1454

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTT 486
                T  GK+F  G G  GRLG G  E    P  +  +   +I QV+   G    +AL+ 
Sbjct: 1455 ----TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSN 1510

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G    G+LG      L   R+   +    + +VA G  H AA+ +T  +YTWG
Sbjct: 1511 EGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWG 1570

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ LKD  V  V CG      +C+
Sbjct: 1571 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1614


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 185/355 (52%), Gaps = 30/355 (8%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP--QLI 290
           P+ +ES    +V  +A     +H + +T +GE++SWG   GGRLGHG + +V +   +++
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKVL 238

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP---RKVSGN 347
            I+   + E       H  A+T  G++Y+WG+G  + G LGHG   S   P   R +SG 
Sbjct: 239 VIVYPYHPE-----GKHYMALTSEGEVYSWGNG--DGGRLGHGDTNSREEPTLVRGLSGK 291

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
             G H+ +I CG  ++A +T+ G LFT+G G++G LGHG       P  V +L+G R   
Sbjct: 292 QLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVID 351

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           + CG      + V  D            G +++WGDGD G+LG G  +    P+ +  L 
Sbjct: 352 ICCGSGDAQTLAVTDD------------GTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQ 399

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEV 526
            ++I +V CG   S+ALT +GH++T G     +LG    + +  P +++G   +  V+ V
Sbjct: 400 GQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVD-V 458

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           A G+ H   +T   +VY WG+   GQLG      ++ PTL+  L  K +  + CG
Sbjct: 459 AVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMP-LDGKSISGIACG 512



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 170/348 (48%), Gaps = 43/348 (12%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFS--WGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
           L V  +AC  R  + +TK G ++   +  ES G            PQL+E L+   V  V
Sbjct: 147 LGVLQLACAERCLIALTKTGRVYMCFYSSESQG------------PQLMESLADKEVLKV 194

Query: 302 ACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           A      H  A+T  G++Y+WG+G  + G LGHG    C+  +KV      I   Y   G
Sbjct: 195 AAHPEGKHYMALTSEGEVYSWGNG--DGGRLGHGDTNVCYKGQKVLV----IVYPYHPEG 248

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHT 415
             H   +TS G ++++G+G  G LGHGD  S   P  V  L G +  R    + CG  ++
Sbjct: 249 K-HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYS 307

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
           AA+              T+ G+LFTWG G+ GRLGHG  E +L P  V  L    +  + 
Sbjct: 308 AAI--------------TADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDIC 353

Query: 476 CGHD--LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           CG     ++A+T  G V++ G   YG+LG   +DG    ++   +    +  V CGA   
Sbjct: 354 CGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFS 413

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            ALT T  ++TWGKG + +LGHG +++   P  ++ L+ K+V  V  G
Sbjct: 414 LALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVG 461



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 164/364 (45%), Gaps = 44/364 (12%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           V++   G  +    S G+V+ WG G   G LG G+  V Y   +    + P   E     
Sbjct: 194 VAAHPEGKHYMALTSEGEVYSWGNG-DGGRLGHGDTNVCYKGQKVLVIVYPYHPE----- 247

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV----NVEL 300
                    +H + +T +GE++SWG   GGRLGHG       P L+  LSG     +V  
Sbjct: 248 --------GKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVH 299

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           + CG  ++ A+T  G+L+TWG G Y  G LGHGS      P  V  +L G  +  I CG 
Sbjct: 300 IVCGSTYSAAITADGELFTWGRGNY--GRLGHGSSEDQLTPTLVV-SLKGRRVIDICCGS 356

Query: 361 W--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
               T  VT  G ++++GDG +G LG G       P+ ++ L+G    RV CG   + A+
Sbjct: 357 GDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLAL 416

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G ++TWG GD  RLGHG +E   FP+ +  L  + +  VA G 
Sbjct: 417 --------------TKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGS 462

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE---SFVEEVACGAYHVAA 535
              + +T  G VY  G    GQLG    D    T+ D  +       +  +ACG      
Sbjct: 463 MHCLVMTEEGEVYGWGRNDQGQLG----DSSFSTKSDPTLMPLDGKSISGIACGPAQSFC 518

Query: 536 LTST 539
            TST
Sbjct: 519 WTST 522



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 26/301 (8%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           G  +    S G+V+ WG G   G LG G+     + SR+   L+       +   V +I 
Sbjct: 248 GKHYMALTSEGEVYSWGNG-DGGRLGHGD-----TNSREEPTLVRGLSGKQLGRHVVHIV 301

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHT 308
           CG+ ++  +T  GE+F+WG  + GRLGHG   D   P L+  L G  V  + C  G+  T
Sbjct: 302 CGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQT 361

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            AVT  G +++WGDG Y  G LG G    C  P K+   L G  +  + CG   +  +T 
Sbjct: 362 LAVTDDGTVWSWGDGDY--GKLGRGGSDGCKTP-KIIDRLQGQDIVRVCCGAQFSLALTK 418

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            GH++T+G G    LGHG       P+++E LRG +   V+ G  H   +          
Sbjct: 419 TGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVM---------- 468

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
               T  G+++ WG  D+G+LG      +  P  + PL  ++I  +ACG   S   T++G
Sbjct: 469 ----TEEGEVYGWGRNDQGQLGDSSFSTKSDP-TLMPLDGKSISGIACGPAQSFCWTSTG 523

Query: 489 H 489
           H
Sbjct: 524 H 524



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 37/305 (12%)

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           E+L  + V  +AC E    A+T++G +Y     + + G     S     +  KV+ + +G
Sbjct: 142 EMLGELGVLQLACAERCLIALTKTGRVYMCFYSSESQGPQLMESLADKEV-LKVAAHPEG 200

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            H  Y++        +TS G ++++G+G  G LGHGD                  T V  
Sbjct: 201 KH--YMA--------LTSEGEVYSWGNGDGGRLGHGD------------------TNVCY 232

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL---- 466
                  +V             TS G++++WG+GD GRLGHGD   R  P  V  L    
Sbjct: 233 KGQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQ 292

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEE 525
           +  ++  + CG   S A+T  G ++T G   YG+LG   + D L PT V   +    V +
Sbjct: 293 LGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVV-SLKGRRVID 351

Query: 526 VACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           + CG+      A+T    V++WG G  G+LG G  D   +P ++D L+ + + RV CG  
Sbjct: 352 ICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQ 411

Query: 584 FTAII 588
           F+  +
Sbjct: 412 FSLAL 416


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 187/383 (48%), Gaps = 31/383 (8%)

Query: 203  VFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            V +WG  +    G L G + +V  +FS+    L P          +H IA G++   +V+
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------IH-IAGGSKSLFVVS 3094

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
            + G++++ GE + GRLG G   +V  P  + +L    V+ VA   G  H  A+T  G ++
Sbjct: 3095 QDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3154

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+G    G LGHG++ +   PR V   L    +  I+CG  H+A ++S G L+T+G G
Sbjct: 3155 SWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWGLG 3211

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D            G +
Sbjct: 3212 EYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTED------------GAV 3259

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +G V+T G   Y
Sbjct: 3260 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 3319

Query: 499  GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
             +LG      +   +    +    V  VA GA H  A+T   +VY WG   +GQ G G+ 
Sbjct: 3320 YRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNT 3379

Query: 559  DNRNSPTLVDFLKDKQVKRVVCG 581
                 P LV  L    V RV CG
Sbjct: 3380 FVNKKPALVIGLDAVFVNRVACG 3402



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 176/349 (50%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 4223 PTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4282

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG+++S   P K+  +L+G+ 
Sbjct: 4283 HVFVKKVAVNSGGKHCLALTTDGEVYAWGEG--EDGKLGHGNRMSYDRP-KLLEHLNGMS 4339

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +T++GH+ T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 4340 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 4399

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 4400 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4447

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   + +LG    D +   +    +    +  +A G+ H
Sbjct: 4448 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4507

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A +   +VYTWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 4508 CVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4556



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 170/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 3097 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 3147

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG  + +  P+L+E L    +  +ACG  H+ A++  G+LYT
Sbjct: 3148 TLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYT 3207

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3208 WGLGEY--GRLGHGDNATQLKPKLVTA-LHGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3264

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    ++ P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3265 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLAL--------------TRAGE 3310

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +A L    +  VA G    +A+T +G VY  G   
Sbjct: 3311 VWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3370

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3371 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSMA 3408



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T  GE+++WGE   G+LGHG       P+L+E
Sbjct: 4274 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLE 4333

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4334 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4390

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4391 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4450

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4451 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4496

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + +G VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4497 KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4556

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4557 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4604

Query: 586  AIIC 589
             ++C
Sbjct: 4605 ELLC 4608



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK +E    + V +IACG+ H+  +T
Sbjct: 4305 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLLEHLNGMSVADIACGSAHSAAIT 4354

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4355 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4414

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4415 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H  A               +  G
Sbjct: 4472 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVAC--------------SDAG 4515

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4516 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 158/322 (49%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            I+ WG    G+LG    + +  P   E LS +    +A GE    AVT  G L+  G   
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATG--- 4257

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y SG          W    + G+L  + +  ++   G  H   +T+ G ++ +G+G  G 
Sbjct: 4258 YGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4317

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ +E L G+    ++CG  H+AA+              T+ G + TWG
Sbjct: 4318 LGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAI--------------TASGHVLTWG 4363

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +T   +V++ G   YG+
Sbjct: 4364 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4423

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  +P +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG  D
Sbjct: 4424 LGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4483 HVRRPKKVAALQGKKIISIATG 4504



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 161/333 (48%), Gaps = 31/333 (9%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +  WG     +LG  + + V  P   + +S +    +A G      V++ G +Y  G+GT
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS-----CGLWHTAVVTSAGHLFTFGDGS 379
              +G LG G   +  +P +    L  +H   +       G  H   +T  G +F++G+G 
Sbjct: 3107 --NGRLGLGVTHNVPLPHQ----LPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3160

Query: 380  FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             G LGHG+  +   PR VE LR  +   ++CG  H+AA+              +S G+L+
Sbjct: 3161 DGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI--------------SSQGELY 3206

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAA 497
            TWG G+ GRLGHGD   +L P+ V  L    + QVACG     ++ALT  G V++ G   
Sbjct: 3207 TWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGD 3266

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +G+LG   ++G         ++   V ++ CGA    ALT   +V+TWGKG   +LGHG 
Sbjct: 3267 FGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3326

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
              +   P  +  L+ ++V  V  G    A+ CL
Sbjct: 3327 DQHVRKPQPIAGLRGRRVIHVAVG----ALHCL 3355



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    +S++ +   S+H +A     + G V  WG+G   G LG G+      
Sbjct: 4325 SYDRPKLLEHLNGMSVADIACGSAHSAA---ITASGHVLTWGKG-RYGRLGHGDSE---- 4376

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 4377 -----DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4431

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 4432 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKK 4489

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    + AG ++T+GD   G LG G   +   PR V  L+G 
Sbjct: 4490 VAA-LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK 4548

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSP 429
               +V+CG  HT A+  +  S    P
Sbjct: 4549 HIVKVTCGSAHTLALSTSQLSERLRP 4574



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 144/325 (44%), Gaps = 34/325 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P     T    +  +AC     VL+ ++G++++W                + PQL++   
Sbjct: 562 PPPALLTCKFQLKQVACSEDMVVLLCQEGKLYNWPIAK----------PETEPQLLDFAE 611

Query: 295 GVNVELVA----CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             N   V+    C   H  AV  + + Y+WG G  +S  LGHG   +  +P K+   +  
Sbjct: 612 IANETFVSIAAHCEGRHFLAVDSNHNAYSWGVG--DSRRLGHGDCHARELPTKIESLVRR 669

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +   Y  CG  ++A +T  G+L+T+G G++G LGHG+     +P  V  L+  +   V+ 
Sbjct: 670 VQSVY--CGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVAL 727

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G            S  +     T  G ++ WGDGD G+LG+G     L P  +  L    
Sbjct: 728 G------------SGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL--PR 773

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
           + +V  G   S+ALT  G +Y+ G A+    QL      G    R+   +    +  VA 
Sbjct: 774 VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAV 833

Query: 529 GAYHVAALTSTSKVYTWGKGANGQL 553
           G  H  AL+S  +++ WG+  N Q+
Sbjct: 834 GVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  I L+     L+    VT  G LF 
Sbjct: 4201 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLF---AVTPDGKLFA 4255

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 4256 TGYGSGGRLGVGGSDSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 4303

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ +  L   ++  +ACG   S A+T SGHV T G
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +T    V++WG G  G
Sbjct: 4364 KGRYGRLGHGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDYG 4422

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4423 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 4459



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 40/279 (14%)

Query: 179 ISLSSVVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           I+  + VS ++H  G      DS  + + WG G           R+G+      +  LP 
Sbjct: 612 IANETFVSIAAHCEGRHFLAVDSNHNAYSWGVG--------DSRRLGHGDCHARE--LPT 661

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
            +ES +   V ++ CG  ++  +T +G +++WG  + GRLGHG   D   P ++  L   
Sbjct: 662 KIES-LVRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDH 720

Query: 297 NVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            V  VA   G+ HT  +TR G +Y WGDG Y  G LG+GS  S   P  +        + 
Sbjct: 721 QVLDVALGSGDAHTLCLTRGGLVYAWGDGDY--GKLGNGSCNSSLQPLLIECL---PRVQ 775

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTRVSC 410
            +  G   +  +T  G L+++G  S   LGH     +    S+PR + +L+  R   V+ 
Sbjct: 776 RVFAGSQFSLALTCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIVHVAV 833

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           GV H  A+              +S G++F WG  D  ++
Sbjct: 834 GVAHCLAL--------------SSNGEIFGWGRNDNQQI 858



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 18/208 (8%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG GD  RLGHGD   R  P  +  L+   +  V CG   S A+T  G++YT G   Y
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLV-RRVQSVYCGCSYSAAITLRGNLYTWGRGTY 697

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHG 556
           G+LG   +D      +   + +  V +VA G+   H   LT    VY WG G  G+LG+G
Sbjct: 698 GRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNG 757

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT-AIIC---LHKW--VSSVDHSV-------CS 603
             ++   P L++ L   +V+RV  G  F+ A+ C   L+ W   S + H +       CS
Sbjct: 758 SCNSSLQPLLIECL--PRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCS 815

Query: 604 SCHNPFGFRRKRHNCYNCGLVFCKACSS 631
                   + KR      G+  C A SS
Sbjct: 816 VPRLITSLQHKRIVHVAVGVAHCLALSS 843



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4198 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPIQLAGGEQSLFAV-------- 4247

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4248 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4301

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4302 TTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLT 4361

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4362 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4407



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 13/160 (8%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTTSGHVYTM 493
           GKL+ W       +   + EP+L     A + +E    +A  C     +A+ ++ + Y+ 
Sbjct: 590 GKLYNWP------IAKPETEPQLLD--FAEIANETFVSIAAHCEGRHFLAVDSNHNAYSW 641

Query: 494 GSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G     +LG        +PT+++  +    V+ V CG  + AA+T    +YTWG+G  G+
Sbjct: 642 GVGDSRRLGHGDCHARELPTKIESLVRR--VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           LGHG+ D++  P +V  LKD QV  V  G      +CL +
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTR 739


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 192/397 (48%), Gaps = 32/397 (8%)

Query: 190  HGSAHE-DFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDV 246
            HG A   D D    V +WG  +    G L G + +V  +FS+    L P          +
Sbjct: 1820 HGMAGALDQDLPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP----------I 1868

Query: 247  HNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--G 304
            H IA G++   +V + G++++ GE + GRLG G   +V  P  + +L    V+ VA   G
Sbjct: 1869 H-IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 1927

Query: 305  EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              H  A+T  G +++WG+G    G LGHG++ +   PR V   L    +  ++CG  H+A
Sbjct: 1928 GKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVE-TLRSKKIRDVACGSSHSA 1984

Query: 365  VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
             ++S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D 
Sbjct: 1985 AISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTED- 2043

Query: 425  SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                       G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+AL
Sbjct: 2044 -----------GSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL 2092

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            T +G V+T G   Y +LG      +   +  G +    V  VA GA H  A+T   +VY 
Sbjct: 2093 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 2152

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            WG   +GQ G G+      P LV  L    V RV CG
Sbjct: 2153 WGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2189



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 177/349 (50%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 3001 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQ 3060

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG+++S   P+ V  +L+G++
Sbjct: 3061 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMN 3117

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +T++GH+ T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 3118 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGS 3177

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 3178 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 3225

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT     + +LG    D +   +    +    +  +A G+ H
Sbjct: 3226 KVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 3285

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A + + +VYTWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 3286 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 3334



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 167/341 (48%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 1884 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 1934

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 1935 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYT 1994

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 1995 WGLGEY--GRLGHGDNATQLKPKLVAA-LAGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL--------------TRAGE 2097

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +  L    +  VA G    +A+T +G VY  G   
Sbjct: 2098 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2157

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 2158 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 2195



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 3052 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 3111

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G+NV  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 3112 HLNGMNVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPQLVEALL-GY 3168

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 3169 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 3228

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TW  GD  RLGHG  +    P+ VA L  +
Sbjct: 3229 CGSQFSVAL--------------TKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGK 3274

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 3275 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 3334

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 3335 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 3382

Query: 586  AIIC 589
             ++C
Sbjct: 3383 ELLC 3386



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    ++V +IACG+ H+  +T
Sbjct: 3083 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMNVADIACGSAHSAAIT 3132

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   PQL+E L G     +AC  G+  T  +T   +++
Sbjct: 3133 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 3192

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+  G
Sbjct: 3193 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 3250 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 3293

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 3294 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 3344



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 145/324 (44%), Gaps = 43/324 (13%)

Query: 287  PQLIEILSGVNVELVACGEYHTCAVT---RSGDLYTWGD------------------GTY 325
            P L  IL+  N + +AC EY+   +     SG +  +GD                  G  
Sbjct: 1784 PDLQHILA--NAQFLAC-EYNGMGMAGGPESGPVSLYGDHGMAGALDQDLPCTVMVWGLN 1840

Query: 326  NSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            +   LG   GSKV      +    L  IH++  S  L+   +V   G ++  G+G+ G L
Sbjct: 1841 DKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVGQNGKVYACGEGTNGRL 1897

Query: 384  GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
            G G   +  +P ++  L      +V+       A+ +  D            GK+F+WG+
Sbjct: 1898 GLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD------------GKVFSWGE 1945

Query: 444  GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
            G+ G+LGHG++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG 
Sbjct: 1946 GEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGH 2005

Query: 504  PVADGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
                  +  ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  
Sbjct: 2006 GDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGS 2065

Query: 562  NSPTLVDFLKDKQVKRVVCGLNFT 585
            ++P  ++ L    V ++ CG  F+
Sbjct: 2066 DTPHEIERLSGIGVIQIECGAQFS 2089



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  + L+     L+    VT  G LF 
Sbjct: 2979 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKLFA 3033

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 3034 TGYGSGGRLGVGGADSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 3081

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ V  L   N+  +ACG   S A+T SGHV T G
Sbjct: 3082 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 3141

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +T    V++WG G  G
Sbjct: 3142 KGRYGRLGHGDSEDQLRPQLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDYG 3200

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 3201 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 3237



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 2976 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 3025

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 3026 ------TPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 3079

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 3080 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLT 3139

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 3140 WGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCI 3185



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 6/162 (3%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +  WG  DK +LG         P     +       +A G      +  +G VY  G   
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLGH 555
             G+LG+ V   +        + +  V++VA   G  H  ALT   KV++WG+G +G+LGH
Sbjct: 1894 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 1953

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            G++   + P LV+ L+ K+++ V CG + +A I     L+ W
Sbjct: 1954 GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTW 1995


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++  G  F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 152/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+              +  G+ F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLAL--------------SKEGEFF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+  G  +  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 16/203 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+ F WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T
Sbjct: 156 GEFFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G 
Sbjct: 267 GAGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 380 FGALGHGDHISTSIPREVETLRG 402
            G LG G   STS  +   T++G
Sbjct: 324 NGQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 190/394 (48%), Gaps = 31/394 (7%)

Query: 192  SAHEDFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
            + H D +    V +WG  +    G L G + +V  +FS     L P          +H I
Sbjct: 3052 TGHTDQELPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSPTISRLRP----------IH-I 3099

Query: 250  ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYH 307
            A G++   +V++ G++++ GE + GRLG G   +V  P  + +L    V+ VA   G  H
Sbjct: 3100 AGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKH 3159

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
              A+T  G +++WG+G    G LGHG++ +   PR V   L    +  I+CG  H+A ++
Sbjct: 3160 ALALTLDGKVFSWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAIS 3216

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      + +  D    
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTED---- 3272

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                    G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG   S+ALT +
Sbjct: 3273 --------GAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRA 3324

Query: 488  GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            G V+T G   Y +LG      +   +    +    V  VA GA H  A+T   +VY WG 
Sbjct: 3325 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGD 3384

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              +GQ G G+      P LV  L    V RV CG
Sbjct: 3385 NDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACG 3418



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 176/349 (50%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 4238 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4297

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG+++S   P+ V  +L+G+ 
Sbjct: 4298 HVFVKKVAVNSGGKHCLALTTDGEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMS 4354

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +T++GH+ T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 4355 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 4414

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 4415 GDAQTLCITDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4462

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   + +LG    + +   +    +    +  +A G+ H
Sbjct: 4463 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLH 4522

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A +   +V+TWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 4523 CVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4571



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 169/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 3113 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 3163

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG  + +  P+L+E L    +  +ACG  H+ A++  G+LYT
Sbjct: 3164 TLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYT 3223

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3224 WGLGEY--GRLGHGDNATQLKPKLVAA-LSGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3280

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +S P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3281 GDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLAL--------------TRAGE 3326

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +A L    +  VA G    +A+T +G VY  G   
Sbjct: 3327 VWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDND 3386

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +    V  VACG+ H  A
Sbjct: 3387 HGQQG--SGNTFVNKKPALVIG-LDAVIVNRVACGSSHSMA 3424



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T  GE+++WGE   G+LGHG       P+L+E
Sbjct: 4289 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4348

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4349 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4405

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4406 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4465

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  E    P+ VA L  +
Sbjct: 4466 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGK 4511

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + +G V+T G    GQLG      +   R+   +    + +V CG
Sbjct: 4512 KIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4571

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4572 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLPPEALHARLILLHHFS 4619

Query: 586  AIIC 589
             ++C
Sbjct: 4620 ELLC 4623



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 29/289 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    + V +IACG+ H+  +T
Sbjct: 4320 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMSVADIACGSAHSAAIT 4369

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   P+L+E L G     +AC  G+  T  +T   +++
Sbjct: 4370 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4429

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4430 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             F  LGHG       P++V  L+G +   ++ G  H  A               +  G++
Sbjct: 4487 DFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVAC--------------SDAGEV 4532

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            FTWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4533 FTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4581



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 158/322 (49%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            I+ WG    G+LG    + +  P   E LS +    +A GE    AVT  G L+  G   
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG--- 4272

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y SG          W    + G+L  + +  ++   G  H   +T+ G ++ +G+G  G 
Sbjct: 4273 YGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4332

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ VE L G+    ++CG  H+AA+              T+ G + TWG
Sbjct: 4333 LGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAI--------------TASGHVLTWG 4378

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +T   +V++ G   YG+
Sbjct: 4379 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4438

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  +P +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG  +
Sbjct: 4439 LGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4498 HVRRPKKVAALQGKKIISIATG 4519



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    +S++ +   S+H +A     + G V  WG+G   G LG G+      
Sbjct: 4340 SYDRPKLVEHLNGMSVADIACGSAHSAA---ITASGHVLTWGKG-RYGRLGHGDSE---- 4391

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 4392 -----DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4446

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 4447 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVEHVRRPKK 4504

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    + AG +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 4505 VAA-LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGK 4563

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSP 429
               +V+CG  HT A+  +  S    P
Sbjct: 4564 HIVKVTCGSAHTLALSTSQLSERLRP 4589



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 28/313 (8%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             +  +AC     +L++K+G++++W            EA+       EI +   + + A 
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNWHIAKP-------EAEPQQLDFAEIANETFISIAAH 652

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           C   H  AV  + + Y+WG G  +S  LGHG   +  +P K+   +  +   Y  CG  +
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVG--DSRRLGHGDCHARELPTKIESLVRLVKSVY--CGCSY 708

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A +T  G+L+T+G G++G LGHG      +P  V  L+  +   V+ G           
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALG----------- 757

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S  +     TS G +F WGDGD G+LG+G     L P+ +  L    + +V  G   S+
Sbjct: 758 -SGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL--PRVQRVFAGAQFSL 814

Query: 483 ALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           AL+  G +Y+ G A+    QL      G    R+   +    + +VA G  H  AL+S+ 
Sbjct: 815 ALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSG 874

Query: 541 KVYTWGKGANGQL 553
           +++ WG+  N Q+
Sbjct: 875 EIFGWGRNDNQQI 887



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 21/273 (7%)

Query: 317  LYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +  WG  D     GL G   KV  + P      L  IH++  S  L+   VV+  G ++ 
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSP--TISRLRPIHIAGGSKSLF---VVSQDGKVYA 3117

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G+G+ G LG G   +  +P ++  L      +V+       A+ +  D           
Sbjct: 3118 CGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD----------- 3166

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             GK+F+WG+G+ G+LGHG++     P  V  L  + I  +ACG   S A+++ G +YT G
Sbjct: 3167 -GKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWG 3225

Query: 495  SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQ 552
               YG+LG       +  ++   ++   V +VACG+      ALT    V++WG G  G+
Sbjct: 3226 LGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3285

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            LG G  +  ++P  ++ L    V ++ CG  F+
Sbjct: 3286 LGRGGSEGSSTPHEIERLSGIGVIQIECGAQFS 3318



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  + L+     L+    VT  G LF 
Sbjct: 4216 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKLFA 4270

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 4271 TGYGSGGRLGVGGSDSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 4318

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ V  L   ++  +ACG   S A+T SGHV T G
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4378

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +T    V++WG G  G
Sbjct: 4379 KGRYGRLGHGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDYG 4437

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4438 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 4474



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 18/208 (8%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG GD  RLGHGD   R  P  +  L+   +  V CG   S A+T  G++YT G   Y
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLV-RLVKSVYCGCSYSAAITLGGNLYTWGRGTY 726

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHG 556
           G+LG   +D      +   + +  V +VA G+   H   LTS   V+ WG G  G+LG+G
Sbjct: 727 GRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNG 786

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT-AIIC---LHKW--VSSVDHSV-------CS 603
             ++   P L+D L   +V+RV  G  F+ A+ C   L+ W   S + H +       CS
Sbjct: 787 SCNSSLLPQLIDCL--PRVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCS 844

Query: 604 SCHNPFGFRRKRHNCYNCGLVFCKACSS 631
                 G + KR      G+  C A SS
Sbjct: 845 VPRLITGLQHKRIVDVAVGVAHCLALSS 872



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 45/296 (15%)

Query: 161 NAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH 220
            A P   +    A ETF IS    +++   G      DS  + + WG G           
Sbjct: 630 EAEPQQLDFAEIANETF-IS----IAAHCEGRHFLAVDSNFNAYSWGVG--------DSR 676

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           R+G+      +  LP  +ES + L V ++ CG  ++  +T  G +++WG  + GRLGHG 
Sbjct: 677 RLGHGDCHARE--LPTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGT 733

Query: 281 EADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
             D   P ++  L    V  VA   G+ HT  +T  G ++ WGDG Y  G LG+GS  S 
Sbjct: 734 SDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY--GKLGNGSCNSS 791

Query: 339 WIPRKVSGNLDGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG----DHISTSI 393
            +P+ +    D +  +  +  G   +  ++  G L+++G  S   LGH     +    S+
Sbjct: 792 LLPQLI----DCLPRVQRVFAGAQFSLALSCEGQLYSWGKAS--CLGHQLVERNVQGCSV 845

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           PR +  L+  R   V+ GV H  A+              +S G++F WG  D  ++
Sbjct: 846 PRLITGLQHKRIVDVAVGVAHCLAL--------------SSSGEIFGWGRNDNQQI 887



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHDLSVALTTSGHVYTMGSA 496
            +  WG  DK +LG G K  ++     +P I       +A G      ++  G VY  G  
Sbjct: 3063 VMVWGLNDKEQLG-GLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3121

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLG 554
              G+LG+ V   +        + +  V++VA   G  H  ALT   KV++WG+G +G+LG
Sbjct: 3122 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3181

Query: 555  HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            HG++   + P LV+ L+ K+++ + CG + +A I
Sbjct: 3182 HGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI 3215



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4213 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4262

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4263 ------TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4316

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4317 TTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLT 4376

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C+
Sbjct: 4377 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4422


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 198/415 (47%), Gaps = 61/415 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG G   G LG            + +   P  +E      +  +  G   ++ +T  
Sbjct: 51  VYSWGYG-GFGQLG---------LQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHN 100

Query: 263 GEIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           GE++SWG+  GG LGH      +++ P+ IE L G  ++ ++CG++H  AVT  G++YTW
Sbjct: 101 GEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTW 160

Query: 321 GDGTYNSGLLGHGSKVS-------------------CWIPRKVSGNLDGIHLSYISCGLW 361
           G+  +  G LGH  ++                      +P+K+  +L  I    ++CG+ 
Sbjct: 161 GNKEF--GKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIE-SLGNIKAKQVACGIQ 217

Query: 362 HTAVVTSAGHLFTFGDGSFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            T V++  G ++TFG   +G+LG+  D  S + P+ ++ L  +   ++S G    AA+  
Sbjct: 218 FTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI--VKISAGYSFCAAI-- 273

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACGHD 479
                       T  GKL+TWG+   G+LG+     +  P  V     +N I  V+CG +
Sbjct: 274 ------------TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDN 321

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
              ALT  G +YT G    GQLG    +D   P  V  E  +  ++ +ACG  H A +T 
Sbjct: 322 FIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV--EFKQKIIK-IACGGSHAAFITE 378

Query: 539 TSKVYTWGKGANGQLGHG-----DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +++Y +G+G+ GQLG G     +   R++P LV + K KQV  V CG   T  I
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAI 433



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 164/363 (45%), Gaps = 55/363 (15%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG+    G + G E R+ ++ ++      P+ +E  +   +  I+CG  H   VT
Sbjct: 101 GEVYSWGKN--KGGILGHEDRLSFNMTQ------PERIEKLLGKKIKQISCGQFHMAAVT 152

Query: 261 KQGEIFSWGEESGGRLGHGRE-----------ADVSH--------PQLIEILSGVNVELV 301
           + GE+++WG +  G+LGH  E            ++SH        PQ IE L  +  + V
Sbjct: 153 EDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQV 212

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACG   T  ++  G +YT+G   Y S  LG+ S  +     ++  +L+ I    IS G  
Sbjct: 213 ACGIQFTVVLSEDGKVYTFGYNQYGS--LGYVSDQNSVTTPQLIKDLNDI--VKISAGYS 268

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT-TRVSCGVWHTAAVVV 420
             A +T  G L+T+G+   G LG+   +  + P  V       +   VSCG    AA+  
Sbjct: 269 FCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAAL-- 326

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       T  G+L+TWG G  G+LGHG+K     P  V     + I ++ACG   
Sbjct: 327 ------------TQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE--FKQKIIKIACGGSH 372

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESF----VEEVACGAYHVA 534
           +  +T    +Y  G  + GQLG+   VA      R    + + F    V +V CG  H  
Sbjct: 373 AAFITEDNQLYQFGRGSEGQLGIGQNVAS-EASIRSTPNLVQYFKGKQVVDVTCGGEHTI 431

Query: 535 ALT 537
           A+T
Sbjct: 432 AIT 434



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 17/118 (14%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG G  +G LG G          ++D   P+ VE      +  IACG  HA  +T
Sbjct: 330 GQLYTWGFG-GDGQLGHG---------NKSDLYAPRHVE--FKQKIIKIACGGSHAAFIT 377

Query: 261 KQGEIFSWGEESGGRLGHGR----EADV-SHPQLIEILSGVNVELVACGEYHTCAVTR 313
           +  +++ +G  S G+LG G+    EA + S P L++   G  V  V CG  HT A+T+
Sbjct: 378 EDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQ 435


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   S+ ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 22/325 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V ++ CG RH V V   G +++ G    G+LGH  E     P+ +  L   N+  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 306 YHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            HT A+   G +Y+WG D     GLLG    +   +PR +  +L  I +  ++CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIK-SLSDIQIVQVACGYYHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+ G  H+  + ++  
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG    G+LG  D+  R  P  +  L  + I  + CG D + A
Sbjct: 209 ------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KV 542
           LT  G V+T G+  YGQLG       +  R   E+  S V +VACG  H +A   +S ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV 567
           Y++G G NGQLG G   NR SP  V
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +  +   V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  ++I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V +V CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYSWGLD-SDGQLGLLGSEEYIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQLI+ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+V+CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQVACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++++WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 169/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F++G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 152/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G D   +  P+ +  L      QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V++ G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +       F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCNKQASPQLIKSLTGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G   ++Q     P+ ++S   +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGIDCNKQAS---PQLIKSLTGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 22/325 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V ++ CG RH V V   G +++ G    G+LGH  E     P+ +  L   N+  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 306 YHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            HT A+   G +Y+WG D     GLLG    +   +PR +  +L  I +  ++CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIK-SLSDIQIVQVACGYYHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+ G  H+  + ++  
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG    G+LG  D+  R  P  +  L  + I  + CG D + A
Sbjct: 209 ------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KV 542
           LT  G V+T G+  YGQLG       +  R   E+  S V +VACG  H +A   +S ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV 567
           Y++G G NGQLG G   NR SP  V
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +  +   V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  ++I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V +V CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYSWGLD-SDGQLGLLGSEEYIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQLI+ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+V+CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQVACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++++WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 18/241 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVE----TLRGLRTTRVSCGVWHTAAVVVA-TDSSSSSPSGSTSC 435
           G LG G   +   P  V+       G R   +    +     + +  D S S  SG  +C
Sbjct: 325 GQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYFCVKRIFSGGDQSFSHYSGPQNC 384

Query: 436 G 436
           G
Sbjct: 385 G 385


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 18/241 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVE----TLRGLRTTRVSCGVWHTAAVVVA-TDSSSSSPSGSTSC 435
           G LG G   +   P  V+       G R   +    +     + +  D S S  SG  +C
Sbjct: 325 GQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYFCVKRIFSGGDQSFSHYSGPQNC 384

Query: 436 G 436
           G
Sbjct: 385 G 385


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 117/241 (48%), Gaps = 18/241 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVE----TLRGLRTTRVSCGVWHTAAVVVA-TDSSSSSPSGSTSC 435
           G LG G   +   P  V+       G R   +    +     + +  D S S  SG  +C
Sbjct: 325 GQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYFCVKRIFSGGDQSFSHYSGPQNC 384

Query: 436 G 436
           G
Sbjct: 385 G 385


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 31  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 88

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 89  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 145

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 205

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 206 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 251

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 252 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 311

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 312 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 350



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 68

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 69  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 124

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 125 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 170

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 171 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 230

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 231 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 290 HEINPRKVFELMGSIVTQVACGRQHTS 316



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 69  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 112

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 113 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 172

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 173 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 231

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 232 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 266



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 166 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 216

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 217 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 276

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 277 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 333

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 334 GQLGTG---STSNRKSPFTVKG 352



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 216 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 275

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 276 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 333

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 334 GQLGTGSTSNRKSPFTVKGN 353


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 33/393 (8%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG    + G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWG--LDSDGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G        P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLVD---FLKDKQVKRVVCGLNFT 585
             H +A   S+ ++Y++G G NGQLG G   NR SP  V    F  + Q  + +   ++ 
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY- 361

Query: 586 AIICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
              C+ +  S  D S        SC  P  FRR
Sbjct: 362 --FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      +++ +  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG- 554
              GQLG   +    P +V    A++ V  V+CG  H  AL    +VY WG  ++GQLG 
Sbjct: 61  NDLGQLGHEKSRK-KPEQVVALDAQNIV-AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G ++    P  +  L D Q+ +V CG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACG 145



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT--DGQLGLPGTEEYIKVPRNIK-SLTD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVS 409
           I +  I+CG +H+  ++    +F++G    G LG G  + S S P+ +++L G+   +V+
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  G  ++I   +PR +++L  ++  +++CG +H+ A+              +   ++F
Sbjct: 116 LGLPGTEEYIK--VPRNIKSLTDIQIVQIACGYYHSLAL--------------SKGSEVF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G + + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   +G LG     +G+    Q+    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG-----LGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT--DGQLGLPGTEEYIKVPRNIK-SLTD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVS 409
           I +  I+CG +H+  ++    +F++G    G LG G  + S S P+ +++L G+   +V+
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 155/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  G  ++I   +PR +++L  ++  +++CG +H+ A+              +   ++F
Sbjct: 116 LGLPGTEEYIK--VPRNIKSLTDIQIVQIACGYYHSLAL--------------SKGSEVF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G + + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   +G LG     +G+    Q+    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG-----LGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIIQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG    + G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWG--LDSDGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   S+ ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +V CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  VACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 22/325 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V ++ CG RH V V   G +++ G    G+LGH  E     P+ +  L   N+  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 306 YHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            HT A+   G +Y+WG D     GLLG    +   +PR +  +L  I +  ++CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIK-SLSDIQIVQVACGYYHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+ G  H+  + ++  
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG    G+LG  D+  R  P  +  L  + I  + CG D + A
Sbjct: 209 ------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KV 542
           LT  G V+T G+  YGQLG       +  R   E+  S V +VACG  H +A   +S ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV 567
           Y++G G NGQLG G   NR SP  V
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +  +   V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  ++I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V +V CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQVACGRQHTS 307



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 139/283 (49%), Gaps = 31/283 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG   ++G LG  G E  +           +P+ ++S 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLD-SDGQLGLLGSEEYIR----------VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+F WG+   G+LG G +    + PQLI+ L G+    
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+  +T SG ++ WG   +  G LG   +   ++P  +  +L    + YI CG 
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYICCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T+V+CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV- 310

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                        S G+++++G G  G+LG G    R  P  V
Sbjct: 311 ------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++++WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGLDCKKQTS---PQLIKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT--DGQLGLPGTEEYIRVPRNIK-SLTD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVS 409
           I +  I+CG +H+  ++    +F++G    G LG G  +   S P+ +++L G+  T+V+
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  G  ++I   +PR +++L  ++  +++CG +H+ A+              +   ++F
Sbjct: 116 LGLPGTEEYIR--VPRNIKSLTDIQIVQIACGYYHSLAL--------------SKGSEVF 159

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G +  R   P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I Q+ACG+  S+AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             +GQLG+   +     P  +   +   F + VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   +G LG     +G+   RQ+    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG-----LGFELKRQSS---PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           R S+ +  +  L    +  + G AH    +L G +F WG     G LG          + 
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRN-KFGQLG---------LND 226

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D  +P  ++S  +  +  I CG  H   +TK+G +F++G    G+LGH   +   +P+
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 289 LIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            +  L G  V  +ACG  HT A V  SG +Y++G G   +G LG GS  +   P  V GN
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GNGQLGTGSTSNRKSPFTVKGN 344


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 193/403 (47%), Gaps = 33/403 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           ++S++   R  + ++ + +SH  A    D    V  WG G  +G LG G+          
Sbjct: 5   KASSSRGVRRQVLALSAGASHSVALLSGDL---VCSWGRG-EDGQLGHGDAE-------- 52

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGE-IFSWGEESGGRLGHGREADVSHPQ 288
            +   P  V +    ++ ++ CGA H   ++   + ++SWG    GRLGHG  +D+  PQ
Sbjct: 53  -ERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQ 111

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            I+ L G+ V+ +ACG+ H  A+T  G++  WG     +G LG G       P K++   
Sbjct: 112 PIKALKGLEVKQIACGDSHCLAITTDGEVLGWG--RNQNGQLGLGHTEDVLTPHKLTA-F 168

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +G+ +  ++ G  HT  VT  G L+ +G G +G LG GD     +P +V  + G     V
Sbjct: 169 EGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMV 228

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CG  HT  V                 G ++T+G    G+LGHGD    L P  V  L  
Sbjct: 229 ACGWRHTICVA--------------ESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKS 274

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVA 527
           + I  +  G   + AL + G +Y  G   +GQ+G     D   P  V G + +  V  V 
Sbjct: 275 KKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-LQDQVVTVVQ 333

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           CG  H  A+T    VY+WG+G +GQLGHGD  +R++P  ++ L
Sbjct: 334 CGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 171/339 (50%), Gaps = 20/339 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + SWG    G+LGHG   +   P ++  L    +  V CG  HT
Sbjct: 19  LSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHT 78

Query: 309 CAVTRSGD-LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A++ S   +Y+WG G +  G LGHG+    +IP+ +   L G+ +  I+CG  H   +T
Sbjct: 79  TALSNSTKTVYSWGWGDF--GRLGHGNSSDLFIPQPIKA-LKGLEVKQIACGDSHCLAIT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G +  +G    G LG G       P ++    G+    ++ G  HT AV         
Sbjct: 136 TDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAV--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  GKL+ WG G  G LG GD+E RL P+ VA +  E +  VACG   ++ +  S
Sbjct: 187 -----TENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAES 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G++YT G + YGQLG    AD L+P +V   +    ++ +  G  H  AL S  ++Y WG
Sbjct: 242 GNMYTFGWSKYGQLGHGDFADHLIPHQVQA-LKSKKIQAITGGWRHTFALDSDGRLYGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               GQ+G G+ ++++SP LV  L+D+ V  V CG   T
Sbjct: 301 WNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHT 339



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 173/346 (50%), Gaps = 30/346 (8%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +SSV   + H +A  +  S   V+ WG G           R+G+  S  +D  +P+ +++
Sbjct: 68  ISSVTCGADHTTALSN--STKTVYSWGWGDFG--------RLGHGNS--SDLFIPQPIKA 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L+V  IACG  H + +T  GE+  WG    G+LG G   DV  P  +    GV V++
Sbjct: 116 LKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKM 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT +G LY WG G Y  G LG G +    +P +V+  + G  +  ++CG 
Sbjct: 176 LAAGAEHTTAVTENGKLYGWGWGRY--GNLGLGDREDRLVPDQVAA-VAGELMKMVACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V  +G+++TFG   +G LGHGD     IP +V+ L+  +   ++ G  HT A+  
Sbjct: 233 RHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                        S G+L+ WG    G++G G+ E +  P+ V  L D+ +  V CG   
Sbjct: 291 ------------DSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEE 525
           ++A+T  G+VY+ G    GQLG     D   P R++   ++ F  E
Sbjct: 339 TLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACE 384



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 112/236 (47%), Gaps = 17/236 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H+  + S   + ++G G  G LGHGD      P  V  L     + V+CG  HT
Sbjct: 19  LSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHT 78

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A+             S S   +++WG GD GRLGHG+      P+ +  L    + Q+A
Sbjct: 79  TAL-------------SNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIA 125

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           CG    +A+TT G V   G    GQLG+    D L P ++        V+ +A GA H  
Sbjct: 126 CGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTA-FEGVAVKMLAAGAEHTT 184

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           A+T   K+Y WG G  G LG GD+++R  P  V  +  + +K V CG   T  IC+
Sbjct: 185 AVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHT--ICV 238



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
           +   +  ++ G   SVAL +   V + G    GQLG   A+      +   + +  +  V
Sbjct: 12  VRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSV 71

Query: 527 ACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            CGA H  AL++++K VY+WG G  G+LGHG+  +   P  +  LK  +VK++ CG
Sbjct: 72  TCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACG 127


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 179/365 (49%), Gaps = 35/365 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H V VT+ GE+ SWG  + G+LG G   D + P +++ LS   V  VACG YHT
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             VT  G +  WG G  NSG LG G   S  +PR VS  L    +  I+CG+ HT  ++ 
Sbjct: 135 AVVTDVGLVMCWGKG--NSGQLGQGDWTSSLLPRTVS-TLYNEKIRQIACGMAHTLALSV 191

Query: 369 AGHLFTFGDGSFGALGHGDH----ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            G ++++G G+ G LG G H       + P++V      +   ++CG  H  A+   TD 
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAI---TDD 248

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHDLSVA 483
                       +LF+WG G  GRLG GD E R  P  V   I+   IC VA G   +  
Sbjct: 249 C-----------RLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAV 297

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG------------EIAESFVEEVACGAY 531
           L+ +G ++T G  +YGQLG   AD  +  +               ++ +  + + ACG  
Sbjct: 298 LSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDT 357

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           H   +++  +V+ WG   +GQLG G  +  NSP  +  L+   V  V CGL  +A + + 
Sbjct: 358 HTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRG-LVGDVSCGLVHSAAVPMQ 416

Query: 592 KWVSS 596
            +  S
Sbjct: 417 IFAVS 421



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 39/292 (13%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRK--------VSGNLDGI-HLS-----YISCGLWH 362
           L  WG+     G LGHG  +S   P++        VS +   + H S     Y++CG  H
Sbjct: 26  LQGWGE----FGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHH 81

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T  VT  G + ++G G+ G LG G+    ++P  V+ L   R   V+CG +HTA V    
Sbjct: 82  TVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV---- 137

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T  G +  WG G+ G+LG GD    L P  V+ L +E I Q+ACG   ++
Sbjct: 138 ----------TDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTL 187

Query: 483 ALTTSGHVYTMGSAAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           AL+ +G +Y+ G+ A GQLGV       AD   P +V  +  E F E +ACG+ H  A+T
Sbjct: 188 ALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKF-EFIACGSRHCMAIT 246

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDF-LKDKQVKRVVCGLNFTAII 588
              ++++WG GA+G+LG GD ++R SPT+V   +++ ++  V  G + TA++
Sbjct: 247 DDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVL 298



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 168/353 (47%), Gaps = 45/353 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V  WG G   G LG G      +F    D  +P  V++     V  +ACG  H  +VT
Sbjct: 89  GEVVSWGWG-NEGQLGSGN-----AF----DQTVPAVVKALSNHRVCGVACGYYHTAVVT 138

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +  WG+ + G+LG G       P+ +  L    +  +ACG  HT A++ +G++Y+W
Sbjct: 139 DVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSW 198

Query: 321 GDGTYNSGLLGHGSK----VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           G G    G LG G           P+KV  + +     +I+CG  H   +T    LF++G
Sbjct: 199 GAGA--DGQLGVGKHQEETADVATPQKVRVDEE-EKFEFIACGSRHCMAITDDCRLFSWG 255

Query: 377 DGSFGALGHGDHISTSIPREV-ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G+ G LG GD  S   P  V  ++  LR   V+ G  HTA   V +D+           
Sbjct: 256 LGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTA---VLSDN----------- 301

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPE--------C----VAPLIDENICQVACGHDLSVA 483
           G++FT G G  G+LGHGD +P+L  +        C    +  L D+ I + ACG   ++ 
Sbjct: 302 GEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLV 361

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           ++T+G V+  G+A  GQLG    +G   + V+       V +V+CG  H AA+
Sbjct: 362 ISTAGEVFAWGAAEDGQLGTGGTEG-ANSPVELTSLRGLVGDVSCGLVHSAAV 413



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 21/239 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G A+G LG G+H+         D   P+ V          IACG+RH + +T
Sbjct: 193 GEIYSWGAG-ADGQLGVGKHQ-----EETADVATPQKVRVDEEEKFEFIACGSRHCMAIT 246

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGDLYT 319
               +FSWG  + GRLG G       P ++   +  + +  VA G +HT  ++ +G+++T
Sbjct: 247 DDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFT 306

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI-----------SCGLWHTAVVTS 368
            G G+Y  G LGHG        +K      G  L +I           +CG  HT V+++
Sbjct: 307 CGRGSY--GQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVIST 364

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           AG +F +G    G LG G     + P E+ +LRGL    VSCG+ H+AAV +   + SS
Sbjct: 365 AGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRGL-VGDVSCGLVHSAAVPMQIFAVSS 422



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 21/177 (11%)

Query: 442 GDGDKGRLGHGDKEPRLFPE------------CVAPLIDENI---CQVACGHDLSVALTT 486
           G G+ GRLGHGD   +L P+                L  E++     VACG   +VA+T 
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87

Query: 487 SGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            G V + G    GQLG   A D  VP  V   ++   V  VACG YH A +T    V  W
Sbjct: 88  DGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA-LSNHRVCGVACGYYHTAVVTDVGLVMCW 146

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSSVD 598
           GKG +GQLG GD  +   P  V  L +++++++ CG+  T  +     ++ W +  D
Sbjct: 147 GKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGAD 203


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 33/393 (8%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G        P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLVD---FLKDKQVKRVVCGLNFT 585
             H +A   S+ ++Y++G G NGQLG G   NR SP  V    F  + Q  + +   ++ 
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY- 361

Query: 586 AIICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
              C+ +  S  D S        SC  P  FRR
Sbjct: 362 --FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      +++ +  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG- 554
              GQLG   +    P +V    A++ V  V+CG  H  AL    +VY WG  ++GQLG 
Sbjct: 61  NDLGQLGHEKSRK-KPEQVVALDAQNIV-AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G ++    P  +  L D Q+ +V CG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACG 145



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 175/370 (47%), Gaps = 34/370 (9%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +F WG  I     LGG E           +  +P+ V+   A +V  IACG  + V +T 
Sbjct: 1   MFCWGSTIHGELGLGGIEDE---------NIFMPRQVDFAKANEVEQIACGENYTVTITN 51

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G+++S G    G+LGH  E      QLI  L     + +ACG  HT AV   G L++WG
Sbjct: 52  DGQVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109

Query: 322 DGTYNSGLLGHGSKVSCW--IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
                 G LG  S V C    PR V   L    +  I+CG+ H+  +T+ G L+++G   
Sbjct: 110 CNM--KGQLGLNS-VDCTERTPRMVKA-LGTSVIVQIACGIEHSIALTNDGELYSWGSNR 165

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G H  T I P+ + TL  +    ++CG +HT  +              +  G +
Sbjct: 166 EGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVI--------------SKSGVV 211

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F WG    G+LG  D + R+ P  +  L +  +C  ACG + SV LT  G V+T G+  Y
Sbjct: 212 FAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMY 271

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGD 557
           GQLG       +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+  
Sbjct: 272 GQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRA 331

Query: 558 KDNRNSPTLV 567
             +  +P +V
Sbjct: 332 SRSATTPLVV 341



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 149/324 (45%), Gaps = 29/324 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   + ++  P+ ++      VE +ACGE +T  +T  G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             Y  G LGH    K    IP      LD      I+CG  HT  V   G LF++G    
Sbjct: 61  NDY--GQLGHEKARKRLQLIP-----GLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMK 113

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG +    +   PR V+ L      +++CG+ H+ A+              T+ G+L+
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIAL--------------TNDGELY 159

Query: 440 TWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG   +G+LG G      + P+ +  L    I  +ACG   +V ++ SG V+  G   +
Sbjct: 160 SWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+      +VP ++   +  + V   ACG      LT    V+T G G  GQLGHG+
Sbjct: 220 GQLGLNDTQQRIVPCQLR-TLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGN 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
             N   P  V  L    V ++ CG
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCG 302



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 35/284 (12%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   +    LG     + ++PR+V        +  I+CG  +T  +T+ G +++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFA-KANEVEQIACGENYTVTITNDGQVYSCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRT---TRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +  +G LGH         + ++ + GL      +++CG  HT AV               
Sbjct: 60  NNDYGQLGH-----EKARKRLQLIPGLDAFVFKKIACGSCHTLAV--------------N 100

Query: 434 SCGKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
             G+LF+WG   KG+LG       ++ PR+    V  L    I Q+ACG + S+ALT  G
Sbjct: 101 EWGQLFSWGCNMKGQLGLNSVDCTERTPRM----VKALGTSVIVQIACGIEHSIALTNDG 156

Query: 489 HVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            +Y+ GS   GQLG+       + P R+   +A   +  +ACG YH   ++ +  V+ WG
Sbjct: 157 ELYSWGSNREGQLGIGSHTVTEIKPKRII-TLAAVPIAFIACGGYHTVVISKSGVVFAWG 215

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +   GQLG  D   R  P  +  L++ +V    CG  F+  + L
Sbjct: 216 RNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTL 259



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG     G LG G H V          + PK + +  A+ +  IACG  H V+++
Sbjct: 156 GELYSWGSN-REGQLGIGSHTV--------TEIKPKRIITLAAVPIAFIACGGYHTVVIS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G +F+WG  + G+LG         P  +  L    V   ACGE  +  +T  G ++T 
Sbjct: 207 KSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTC 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G Y  G LGHG+ ++  +PR+V   L G  ++ ISCG  HT A+V S G ++ +G G 
Sbjct: 267 GAGMY--GQLGHGNGMNEILPRQVM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 380 FGALGHGDHISTSIPREV 397
            G LG+    S + P  V
Sbjct: 324 AGQLGNRASRSATTPLVV 341


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT--DGQLGLPGTEEYIRVPRNIK-SLTD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVS 409
           I +  I+CG +H+  ++    +F++G    G LG G  +   S P+ +++L G+  T+V+
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  G  ++I   +PR +++L  ++  +++CG +H+ A+              +   ++F
Sbjct: 116 LGLPGTEEYIR--VPRNIKSLTDIQIVQIACGYYHSLAL--------------SKGSEVF 159

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G +  R   P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I Q+ACG+  S+AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             +GQLG+   +     P  +   +   F + VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   +G LG     +G+   RQ+    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG-----LGFELKRQSS---PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           R S+ +  +  L    +  + G AH    +L G +F WG     G LG          + 
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRN-KFGQLG---------LND 226

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D  +P  ++S  +  +  I CG  H   +TK+G +F++G    G+LGH   +   +P+
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 289 LIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            +  L G  V  +ACG  HT A V  SG +Y++G G   +G LG GS  +   P  V GN
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GNGQLGTGSTSNRKSPFTVKGN 344


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 33/393 (8%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G        P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVD---FLKDKQVKRVVCGLNFT 585
             H +A   +S ++Y++G G NGQLG G   NR SP  V    F  + Q  + +   ++ 
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY- 361

Query: 586 AIICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
              C+ +  S  D S        SC  P  FRR
Sbjct: 362 --FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      +++ +  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG- 554
              GQLG   +    P +V    A++ V  V+CG  H  AL    +VY WG  ++GQLG 
Sbjct: 61  NDLGQLGHEKSRK-KPEQVVALDAQNIV-AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G ++    P  +  L D Q+ +V CG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACG 145



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT--DGQLGLPGTEEYIRVPRNIK-SLTD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVS 409
           I +  I+CG +H+  ++    +F++G    G LG G  +   S P+ +++L G+  T+V+
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  G  ++I   +PR +++L  ++  +++CG +H+ A+              +   ++F
Sbjct: 116 LGLPGTEEYIR--VPRNIKSLTDIQIVQIACGYYHSLAL--------------SKGSEVF 159

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G +  R   P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I Q+ACG+  S+AL+    V++ G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             +GQLG+   +     P  +   +   F + VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   +G LG     +G+   RQ+    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG-----LGFELKRQSS---PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           R S+ +  +  L    +  + G AH    +L G +F WG     G LG          + 
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRN-KFGQLG---------LND 226

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D  +P  ++S  +  +  I CG  H   +TK+G +F++G    G+LGH   +   +P+
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 289 LIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            +  L G  V  +ACG  HT A V  SG +Y++G G   +G LG GS  +   P  V GN
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GNGQLGTGSTSNRKSPFTVKGN 344


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 193/404 (47%), Gaps = 32/404 (7%)

Query: 183  SVVSSSSHGSAHE-DFDSLGDVFIWG--EGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
            SV     HG A   D D    V +WG  +    G L G + +V  +FS+    L P    
Sbjct: 3076 SVSLHGDHGMAGALDQDLPCTVMVWGLNDKEQLGGLKGSKVKVP-TFSQTISRLRP---- 3130

Query: 240  STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                  +H IA G++   +V + G++++ GE + GRLG G   +V  P  + +L    V+
Sbjct: 3131 ------IH-IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 3183

Query: 300  LVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             VA   G  H  A+T  G +++WG+G    G LGHG++ +   PR V   L    +  ++
Sbjct: 3184 KVAVHSGGKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVE-TLRSKKIRDVA 3240

Query: 358  CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            CG  H+A ++S G L+T+G G +G LGHGD+ +   P+ V  L G R  +V+CG      
Sbjct: 3241 CGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQT 3300

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            + +  D            G +F+WGDGD G+LG G  E    P  +  L    + Q+ CG
Sbjct: 3301 LALTED------------GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECG 3348

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
               S+ALT +G V+T G   Y +LG      +   +    +    V  VA GA H  A+T
Sbjct: 3349 AQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3408

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
               +VY WG   +GQ G G+      P LV  L    V RV CG
Sbjct: 3409 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3452



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 17/349 (4%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P   E+   L    +A G +    VT  G++F+ G  SGGRLG G     + P L+  L 
Sbjct: 4260 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQ 4319

Query: 295  GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             V V+ VA   G  H  A+T  G++Y WG+G    G LGHG+++S   P+ V  +L+G++
Sbjct: 4320 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMN 4376

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ I+CG  H+A +T++GH+ T+G G +G LGHGD      P+ VE L G R   ++CG 
Sbjct: 4377 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGS 4436

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                 + +  D +            +++WGDGD G+LG G  +    P  +  L    + 
Sbjct: 4437 GDAQTLCINDDDN------------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4484

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            +V CG   SVALT SG VYT G   + +LG    D +   +    +    +  +A G+ H
Sbjct: 4485 KVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 4544

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              A + + +VYTWG    GQLG G       P LV  L+ K + +V CG
Sbjct: 4545 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4593



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 168/341 (49%), Gaps = 35/341 (10%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+  GEG  NG LG G  H V      Q   L    V+      VH+   G +HA+ +
Sbjct: 3147 GKVYACGEG-TNGRLGLGVTHNV--PLPHQLPVLHQYVVKKVA---VHS---GGKHALAL 3197

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T  G++FSWGE   G+LGHG    +  P+L+E L    +  VACG  H+ A++  G+LYT
Sbjct: 3198 TLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYT 3257

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
            WG G Y  G LGHG   +   P+ V+  L G  +  ++CG     T  +T  G +F++GD
Sbjct: 3258 WGLGEY--GRLGHGDNSTQLKPKLVAA-LAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G FG LG G    +  P E+E L G+   ++ CG   + A+              T  G+
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL--------------TRAGE 3360

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            ++TWG GD  RLGHG  +    P+ +A L    +  VA G    +A+T +G VY  G   
Sbjct: 3361 VWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3420

Query: 498  YGQLGVPVADGLV---PTRVDGEIAESFVEEVACGAYHVAA 535
            +GQ G    +  V   P  V G +   FV  VACG+ H  A
Sbjct: 3421 HGQQG--SGNTFVNKKPALVIG-LDAVFVNRVACGSSHSIA 3458



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 234  LPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            +P  + S   + V  +A   G +H + +T +GE+++WGE   G+LGHG       P+L+E
Sbjct: 4311 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4370

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+G+NV  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G 
Sbjct: 4371 HLNGMNVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPQLVEALL-GY 4427

Query: 352  HLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
                I+CG     T  +    +++++GDG +G LG G      +P ++E+L GL   +V 
Sbjct: 4428 RAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4487

Query: 410  CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            CG   + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  +
Sbjct: 4488 CGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK 4533

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
             I  +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG
Sbjct: 4534 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCG 4593

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFT 585
            + H  AL+++            QL    +   N P   D ++D   +    R++   +F+
Sbjct: 4594 SAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFS 4641

Query: 586  AIIC 589
             ++C
Sbjct: 4642 ELLC 4645



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 33/291 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+V+ WGEG  +G LG G      S+ R      PK VE    ++V +IACG+ H+  +T
Sbjct: 4342 GEVYAWGEG-EDGKLGHGNR---MSYDR------PKLVEHLNGMNVADIACGSAHSAAIT 4391

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G + +WG+   GRLGHG   D   PQL+E L G     +AC  G+  T  +    +++
Sbjct: 4392 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVW 4451

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T +G ++T+G G
Sbjct: 4452 SWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4508

Query: 379  SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             F  LGHG  DH+    P++V  L+G +   ++ G  H    V  +DS           G
Sbjct: 4509 DFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLH---CVACSDS-----------G 4552

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
            +++TWGD D+G+LG G       P  VA L  ++I +V CG   ++AL+TS
Sbjct: 4553 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 23/322 (7%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            I+ WG    G+LG    + +  P   E LS +    +A GE    AVT  G L+  G   
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG--- 4294

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGA 382
            Y SG          W    + G+L  + +  ++   G  H   +T+ G ++ +G+G  G 
Sbjct: 4295 YGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4354

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LGHG+ +S   P+ VE L G+    ++CG  H+AA+              T+ G + TWG
Sbjct: 4355 LGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAI--------------TASGHVLTWG 4400

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGSAAYGQ 500
             G  GRLGHGD E +L P+ V  L+      +ACG     ++ +    +V++ G   YG+
Sbjct: 4401 KGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGK 4460

Query: 501  LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            LG   +DG  +P +++  +A   V +V CG+    ALT +  VYTWGKG   +LGHG  D
Sbjct: 4461 LGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519

Query: 560  NRNSPTLVDFLKDKQVKRVVCG 581
            +   P  V  L+ K++  +  G
Sbjct: 4520 HVRRPKKVAALQGKKIISIATG 4541



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 167  SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
            S DR    E    ++++ +   S+H +A     + G V  WG+G   G LG G+      
Sbjct: 4362 SYDRPKLVEHLNGMNVADIACGSAHSAA---ITASGHVLTWGKG-RYGRLGHGD------ 4411

Query: 226  FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                 D L P+ VE+ +     +IACG+  A  + +     ++SWG+   G+LG G    
Sbjct: 4412 ---SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDG 4468

Query: 284  VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
               P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 4469 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKK 4526

Query: 344  VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
            V+  L G  +  I+ G  H    + +G ++T+GD   G LG G   +   PR V  L+G 
Sbjct: 4527 VAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK 4585

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSP 429
               +V+CG  HT A+  +  S    P
Sbjct: 4586 HIVKVTCGSAHTLALSTSQLSERLRP 4611



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 32/314 (10%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA- 302
             V  I C     +++++ G++++W      R+        + PQL+E ++   +  +A 
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNW------RMFKPE----TEPQLLEEIAHETIVSIAS 625

Query: 303 -CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
            C   H  A+  + + Y+WG+G  +   LGHG   +  +P K++  L    +  + CG  
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHR--LGHGDTHARAVPTKIT--LLDRCVKAVFCGCS 681

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++A +T +G+L+T+G G++  LGHG+     +P  V  L       V+ G     ++ + 
Sbjct: 682 YSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCL- 740

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      TS G ++ WGD D G+LG+G+    + P  V  L    + +V  G   S
Sbjct: 741 -----------TSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFS 787

Query: 482 VALTTSGHVYTMGSAAY--GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           +ALTT G +Y+ G A+    QL    A      R+   +    + +VA G  H  AL+S 
Sbjct: 788 MALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSC 847

Query: 540 SKVYTWGKGANGQL 553
            +V+ WG+  + Q+
Sbjct: 848 GEVFGWGRNDSQQI 861



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 17/255 (6%)

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            GSKV      +    L  IH++  S  L+   +V   G ++  G+G+ G LG G   +  
Sbjct: 3113 GSKVKVPTFSQTISRLRPIHIAGGSKSLF---IVGQNGKVYACGEGTNGRLGLGVTHNVP 3169

Query: 393  IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            +P ++  L      +V+       A+ +  D            GK+F+WG+G+ G+LGHG
Sbjct: 3170 LPHQLPVLHQYVVKKVAVHSGGKHALALTLD------------GKVFSWGEGEDGKLGHG 3217

Query: 453  DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
            ++     P  V  L  + I  VACG   S A+++ G +YT G   YG+LG       +  
Sbjct: 3218 NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKP 3277

Query: 513  RVDGEIAESFVEEVACGAY--HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            ++   +A   V +VACG+      ALT    V++WG G  G+LG G  +  ++P  ++ L
Sbjct: 3278 KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3337

Query: 571  KDKQVKRVVCGLNFT 585
                V ++ CG  F+
Sbjct: 3338 SGIGVIQIECGAQFS 3352



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 18/208 (8%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WG+G+  RLGHGD   R  P  +  L+D  +  V CG   S A+T SG++YT G   Y
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKIT-LLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTY 700

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHG 556
            +LG   +D      V   + E  + +VA G+   H   LTS   VY WG    G+LG+G
Sbjct: 701 ARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG 760

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW--VSSVDHSV-------CS 603
           + +   SP LV+ L   +V+RV  G  F+  +     L+ W   S + H +       CS
Sbjct: 761 NLNGSMSPVLVESL--PKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCS 818

Query: 604 SCHNPFGFRRKRHNCYNCGLVFCKACSS 631
                 G + KR      G+  C A SS
Sbjct: 819 VPRLISGLQHKRIVDVAVGVAHCLALSS 846



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 317  LYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            +Y WG    + G LG   GS++    P +    L  + L+     L+    VT  G LF 
Sbjct: 4238 IYGWGHN--HRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKLFA 4292

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             G GS G LG G   S +IP  + +L+            H     VA +S        T+
Sbjct: 4293 TGYGSGGRLGVGGADSWAIPTLLGSLQ------------HVFVKKVAVNSGGKHCLALTT 4340

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+++ WG+G+ G+LGHG++     P+ V  L   N+  +ACG   S A+T SGHV T G
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 4400

Query: 495  SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANG 551
               YG+LG     D L P  V+  +    ++ +ACG+       +     V++WG G  G
Sbjct: 4401 KGRYGRLGHGDSEDQLRPQLVEALLGYRAID-IACGSGDAQTLCINDDDNVWSWGDGDYG 4459

Query: 552  QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +LG G  D    P  ++ L    V +V CG  F+  +
Sbjct: 4460 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVAL 4496



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 46/282 (16%)

Query: 179 ISLSSVVSSSSH--GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           I+  ++VS +SH  G      D   + + WG G         +HR+G+  +        +
Sbjct: 615 IAHETIVSIASHCEGRHFMAIDINRNAYSWGNG--------EDHRLGHGDTHA------R 660

Query: 237 AVESTMALD---VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           AV + + L    V  + CG  ++  +T  G +++WG  +  RLGHG   D   P ++  L
Sbjct: 661 AVPTKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMAL 720

Query: 294 SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
           +   +  VA   G+ H+  +T  G +Y WGD  Y  G LG+G+      P  V  +L  +
Sbjct: 721 TEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY--GKLGNGNLNGSMSPVLVE-SLPKV 777

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG----DHISTSIPREVETLRGLRTTR 407
              +   G   +  +T+ G L+++G  S   LGH          S+PR +  L+  R   
Sbjct: 778 QRVF--AGAQFSMALTTDGQLYSWGKAS--CLGHQLVERSAQWCSVPRLISGLQHKRIVD 833

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           V+ GV H  A+              +SCG++F WG  D  ++
Sbjct: 834 VAVGVAHCLAL--------------SSCGEVFGWGRNDSQQI 861



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 20/227 (8%)

Query: 369  AGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            A  ++ +G    G LG   G  I T  P E  +L  LR  +++ G     AV        
Sbjct: 4235 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAV-------- 4284

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVAL 484
                  T  GKLF  G G  GRLG G  +    P  +  L    + +VA   G    +AL
Sbjct: 4285 ------TPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL 4338

Query: 485  TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            TT G VY  G    G+LG          ++   +    V ++ACG+ H AA+T++  V T
Sbjct: 4339 TTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLT 4398

Query: 545  WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            WGKG  G+LGHGD +++  P LV+ L   +   + CG      +C++
Sbjct: 4399 WGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCIN 4445



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 2/153 (1%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +  WG  DK +LG         P     +       +A G      +  +G VY  G   
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLGH 555
             G+LG+ V   +        + +  V++VA   G  H  ALT   KV++WG+G +G+LGH
Sbjct: 3157 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3216

Query: 556  GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G++   + P LV+ L+ K+++ V CG + +A I
Sbjct: 3217 GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI 3249



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA--CGHDLSVALTTSGHVYTM 493
           GKL+ W      R+   + EP+L  E    +  E I  +A  C     +A+  + + Y+ 
Sbjct: 595 GKLYNW------RMFKPETEPQLLEE----IAHETIVSIASHCEGRHFMAIDINRNAYSW 644

Query: 494 GSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G+    +LG        VPT++   + +  V+ V CG  + AA+T +  +YTWG+G   +
Sbjct: 645 GNGEDHRLGHGDTHARAVPTKIT--LLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYAR 702

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           LGHG+ D++  PT+V  L + ++  V  G      +CL
Sbjct: 703 LGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCL 740


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   S+ ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 31/283 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG   ++G LG  G E  +           +P+ ++S 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR----------VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+F WG+   G+LG G +    + PQL++ L G+    
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+  +T SG ++ WG   +  G LG   +   ++P  +  +L    + YI CG 
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYICCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T ++CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV- 310

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                        S G+++++G G  G+LG G    R  P  V
Sbjct: 311 ------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 173/330 (52%), Gaps = 17/330 (5%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQ 288
           +D   P ++ + +  D+ +IA    H   +T +GE+++ G    G+LG  G E  V  P 
Sbjct: 21  SDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVV-PI 79

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            +  L    V  +ACG  HT AVT +G L +WG   Y       G+ V    PR V G+ 
Sbjct: 80  RVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSR 139

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           D +H S ++ G +HT  +T +G +++FGDGS GALGHG+    S P  V++L GL  T++
Sbjct: 140 D-LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQI 198

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CG  H+AA+ V               GK+FTWG G  G+LGHG  +    P  V  L+D
Sbjct: 199 ACGENHSAALTVD--------------GKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVD 244

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
            ++ Q+ACG D ++A+T+ G +++ G   +GQ G    + ++  +   ++    + +V+ 
Sbjct: 245 HDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSA 304

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GA H   L    +VY WG     QLG  D+
Sbjct: 305 GARHTVVLLDRGEVYGWGDCEQRQLGTCDR 334



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 170/334 (50%), Gaps = 35/334 (10%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +++ G    G+LG G  +D   P  +  L G ++  +A  +YHT  +T  G++YT   G+
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT--TGS 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            ++G LG        +P +V+  LD   +++I+CG  HT  VT  G L ++G   +G LG
Sbjct: 62  NDAGQLGVRGMEEQVVPIRVAA-LDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 385 H--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
              G+ +    PR V+  R L  +RV+ G +HT A+              T  G ++++G
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL--------------TGSGDVYSFG 166

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           DG  G LGHG+ +    P  V  L    + Q+ACG + S ALT  G V+T G   YGQLG
Sbjct: 167 DGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLG 226

Query: 503 --------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
                   +PVA   V   VD ++ +     +ACG  H  A+TS  ++++WG G  GQ G
Sbjct: 227 HGSTQNIKLPVA---VKALVDHDVIQ-----IACGGDHTLAITSDGRLFSWGHGLWGQTG 278

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           HG K++  SP  V  L+ + + +V  G   T ++
Sbjct: 279 HGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVL 312



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 18/240 (7%)

Query: 216 GGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGG 274
           GG E+ ++G+      D + P+ V+ +  L    +A G  H + +T  G+++S+G+ S G
Sbjct: 112 GGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171

Query: 275 RLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS 334
            LGHG     S P L++ L G+ V  +ACGE H+ A+T  G ++TWG G Y  G LGHGS
Sbjct: 172 ALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKY--GQLGHGS 229

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP 394
             +  +P  V   +D   +  I+CG  HT  +TS G LF++G G +G  GHG       P
Sbjct: 230 TQNIKLPVAVKALVD-HDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSP 288

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           ++V  L G    +VS G  HT   VV  D            G+++ WGD ++ +LG  D+
Sbjct: 289 KQVHQLEGRVLVQVSAGARHT---VVLLDR-----------GEVYGWGDCEQRQLGTCDR 334



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 93/177 (52%), Gaps = 13/177 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDV+ +G+G ++G LG G                P  V+S   L V  IACG  H+  +T
Sbjct: 160 GDVYSFGDG-SSGALGHGN---------LDGCSTPSLVKSLWGLGVTQIACGENHSAALT 209

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++F+WG    G+LGHG   ++  P  ++ L   +V  +ACG  HT A+T  G L++W
Sbjct: 210 VDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSW 269

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           G G +  G  GHG+K     P++V   L+G  L  +S G  HT V+   G ++ +GD
Sbjct: 270 GHGLW--GQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   S+ ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 33/393 (8%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G        P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVD---FLKDKQVKRVVCGLNFT 585
             H +A   +S ++Y++G G NGQLG G   NR SP  V    F  + Q  + +   ++ 
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY- 361

Query: 586 AIICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
              C+ +  S  D S        SC  P  FRR
Sbjct: 362 --FCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      +++ +  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG- 554
              GQLG   +    P +V    A++ V  V+CG  H  AL    +VY WG  ++GQLG 
Sbjct: 61  NDLGQLGHEKSRK-KPEQVVALDAQNIV-AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G ++    P  +  L D Q+ +V CG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACG 145



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 172/336 (51%), Gaps = 22/336 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+  E      V ++ CG RH   + + G +++ G    G+LGH  E     P+ +  L 
Sbjct: 25  PRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSGNLDGIHL 353
              +  ++CGE HT A+   G +++WG G+   G LG  +   C  +PR +  +L  + +
Sbjct: 83  AQIIVALSCGESHTLALNDKGQVFSWGLGS--DGQLGLNNFEECIRVPRNIK-SLSDVQV 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGV 412
           + ++CG WH+  ++  GH+F++G   +G LG G    S S+P+ +++L+G+   +++ G 
Sbjct: 140 AQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG    G+LG  D   R FP  +  L  + + 
Sbjct: 200 AHSFALTLS--------------GAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVI 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            ++CG D + ALT  G V+T G+  YGQLG    +  V  R   E+  + V ++ACG  H
Sbjct: 246 YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQH 305

Query: 533 VAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             A T +S K+ ++G G NGQLG     NR SP  V
Sbjct: 306 TLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPV 341



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 151/322 (46%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  E   G  V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD   +  +SCG  HT  +   G +F++G GS G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQ 115

Query: 383 LGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  +      +PR +++L  ++  +V+CG WH+ A+              +  G +F+W
Sbjct: 116 LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL--------------SKGGHIFSW 161

Query: 442 GDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G     +  P+ +  L      Q+A G   S ALT SG V+  G   +GQ
Sbjct: 162 GQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  +    ++  +  ++CG  H AALT    V+T+G G  GQLGH   +
Sbjct: 222 LGLNDTNDRCFPALLKALRSQRVIY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEVNPRKVFELMGNVVTQIACG 302



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 132/271 (48%), Gaps = 27/271 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + ++ + S G +H    +  G VF WG G ++G LG            +    +P+ ++S
Sbjct: 83  AQIIVALSCGESHTLALNDKGQVFSWGLG-SDGQLGLNNF--------EECIRVPRNIKS 133

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVE 299
              + V  +ACG  H++ ++K G IFSWG+   G+LG G     +S PQ ++ L G+   
Sbjct: 134 LSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFA 193

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G  H+ A+T SG ++ WG   +  G LG         P  +   L    + YISCG
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKF--GQLGLNDTNDRCFPALLKA-LRSQRVIYISCG 250

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT A  
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAF- 309

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
                       + S GK+ ++G G  G+LG
Sbjct: 310 ------------TPSSGKMDSFGLGGNGQLG 328



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 128/275 (46%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK      G  +  + CG  HTA +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCE-FFHGKRVRDVGCGRRHTAFLLEDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       +SCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQIIVALSCGESHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG G  G+LG  + E  +  P  +  L D  + QVACG+  S+AL+  GH+++ G 
Sbjct: 104 QVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQ 163

Query: 496 AAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +      VP  +       F + +A G  H  ALT +  V+ WG+   GQL
Sbjct: 164 NRYGQLGLGMTGQSISVPQHLQSLQGIPFAQ-IAAGGAHSFALTLSGAVFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D ++R  P L+  L+ ++V  + CG + TA +
Sbjct: 223 GLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     Q+A G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +     +  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCKKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S     +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLAD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLADIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGLDCKKQASPKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     PK ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGLDCKKQAS---PKLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T ++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TEIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T ++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TEIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIK-SLAD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLLGSEECIR--VPRNIKSLADIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGLDCKKQASPKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +Q     PK ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGLDCKKQAS---PKLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   S+ ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T ++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TEIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 20/339 (5%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + +WG    G+LGHG   D   P +I       +  V CG  HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 309 CAVTR-SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A +     +Y+WG G +  G LGHG+    + P+ V   L GI +  ++CG  H   VT
Sbjct: 79  TAYSEDEHQVYSWGWGDF--GRLGHGNSTDVFTPQPVKA-LQGIKIKQLACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            AG + ++G    G LG G    + +P+ ++   G+    ++ G  HTAAV         
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAV--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G ++ WG G  G LG GD+  R  PE V+ +  + +  VACG   ++ +++S
Sbjct: 187 -----TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSS 241

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G +YT G + YGQLG     D LVP +V+  + +S   +++ G  H  ALTS  K+Y WG
Sbjct: 242 GSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALTSDGKLYGWG 300

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               GQ+G GD  +  SP  V+F ++++V +V CG   T
Sbjct: 301 WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHT 339



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 29/305 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ + +    V+ WG G           R+G+  S  TD   P+ V++
Sbjct: 68  ITSVICGADHTTAYSEDEH--QVYSWGWGDFG--------RLGHGNS--TDVFTPQPVKA 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              + +  +ACG  H + VT  GE+ SWG    G+LG G   D   PQ I+   G++V++
Sbjct: 116 LQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKM 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  HT AVT  GD+Y WG G Y  G LG G +   ++P KVS +++G  +  ++CG 
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRY--GNLGLGDRNDRFVPEKVS-SVEGDKMVLVACGW 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT  V+S+G L+T+G   +G LGHGD     +P +VE L+   T+++S G  HT A+  
Sbjct: 233 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMAL-- 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS GKL+ WG    G++G GD      P  V    ++ + QVACG   
Sbjct: 291 ------------TSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRH 338

Query: 481 SVALT 485
           ++A T
Sbjct: 339 TLAFT 343



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 178/352 (50%), Gaps = 31/352 (8%)

Query: 189 SHGSAHEDFDSLGDVF-IWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G++H      G+V   WG G  +G LG G+           D L+P  +    A  + 
Sbjct: 20  SAGASHSVALLAGNVLCTWGRG-EDGQLGHGDAE---------DRLVPTVISGFDAPGIT 69

Query: 248 NIACGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
           ++ CGA H    ++ + +++SWG    GRLGHG   DV  PQ ++ L G+ ++ +ACG+ 
Sbjct: 70  SVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDS 129

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H  AVT +G++ +W  G   +G LG G+     +P+ +    +GI +  I+ G  HTA V
Sbjct: 130 HCLAVTMAGEVLSW--GRNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAV 186

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G ++ +G G +G LG GD     +P +V ++ G +   V+CG  HT  V        
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITV-------- 238

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 +S G L+T+G    G+LGHGD E  L P  V  L D +  Q++ G   ++ALT+
Sbjct: 239 ------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTS 292

Query: 487 SGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
            G +Y  G   +GQ+G    AD   P +V+    E  V +VACG  H  A T
Sbjct: 293 DGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP-EEQKVAQVACGWRHTLAFT 343



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H+  + +   L T+G G  G LGHGD     +P  +        T V CG  HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A              S    ++++WG GD GRLGHG+      P+ V  L    I Q+A
Sbjct: 79  TAY-------------SEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHVA 534
           CG    +A+T +G V + G    GQLG+    D L+P  +      S V+ +A GA H A
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAEHTA 184

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A+T    +Y WG G  G LG GD+++R  P  V  ++  ++  V CG   T  +
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITV 238


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  VACGE HT A+   G +Y WG  +   G LG  GS+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V + ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 151/327 (46%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V   LD  ++  ++CG  HT  +   G ++ +G  S G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+  A++              +F W
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VFCW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V +  CG   T+
Sbjct: 281 HEINPRKVFELMGSIVTQAACGRQHTS 307



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PR+ S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       V+CG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+ +       P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGIDCQKQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++  +CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V   ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3843 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPIQLIGGEQTLFAVT 3892

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3893 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3952

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3953 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4009

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDT------------V 4057

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 4058 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4117

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 4118 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4176

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4177 TNAIQRPRLVAALQGKKVNRVACG 4200



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  +    P+ +S   G   
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTLPLEEPKVISAFSGKQG 550

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 611 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3978

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3979 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVE-VLQGHR 4035

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 4036 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4095

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 4096 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4141

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 4142 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4201

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4202 AHTLAW-STSKPASAGK 4217



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 32/295 (10%)

Query: 203  VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 261  KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
             +G++++ GE + GRLG G  +  V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 3070 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 3174

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3229



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 526

Query: 382 ALGHGDHISTSIPREVETLRGLR----TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +       ++CG  ++AA+              T+ G+
Sbjct: 527 RLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAI--------------TAEGE 572

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 24/292 (8%)

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
            T + ++F WG     +LG  + + +  P   E LS +NV  VA G     AVT  G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 320  WGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFG 376
             G+ T  +G LG G S  +  IPR+++  L    +  ++   G  H   +T  G +F++G
Sbjct: 3017 CGEAT--NGRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            +G  G LGH   ++   PR +E L+  R   ++CG  H+AA+              TS G
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL--------------TSSG 3119

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMG 494
            +L+TWG G+ GRLGHGD   +L P+ V  L+   + QVACG     ++ALT  G V++ G
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179

Query: 495  SAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
               +G+LG   ++G  +P  ++  +    V ++ CGA    ALT +  V+TW
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3971 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 4019

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE      V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 4020 E--DQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4077

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 4078 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 4135

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 4136 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4194

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4195 NRVACGSAHTLAW------STSKPA---SAGKL 4218



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 112/220 (50%), Gaps = 12/220 (5%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 3012 GKVYACGEA-TNGRLGLGLSSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 3064

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
            G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVKVLL-GHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
             FG LG G     +IP+ +E L G    ++ CG   + A+
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTLPLEEPKVISAFSGKQGGK----- 552

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 553 ------HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 606

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 607 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKV 663

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 724 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPTALPGLDTKHIVGI 767

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 768 ACGPAQSFA 776



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 30/285 (10%)

Query: 310  AVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A T    ++ WG  D     GL G   KV  +     S  L  +++  ++ G      VT
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3009

Query: 368  SAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
              G ++  G+ + G LG G    T  IPR++  L      +V            A  S  
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKV------------AVHSGG 3057

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               +  T  GK+F+WG+GD G+LGH  +     P  +  L  + I  +ACG   S ALT+
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAY--HVAALTSTS 540
            SG +YT G   YG+LG     G   T++  ++ +      V +VACG+      ALT   
Sbjct: 3118 SGELYTWGLGEYGRLG----HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173

Query: 541  KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             V++WG G  G+LG G  +  N P  ++ L  + V ++ CG  F+
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 7/171 (4%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F WG  DK +LG         P     L   N+ QVA G     A+T  G 
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013

Query: 490  VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWG 546
            VY  G A  G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG
Sbjct: 3014 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
            +G +G+LGH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 21/279 (7%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  I L      L+    VT+ G 
Sbjct: 3842 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLF---AVTADGK 3896

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3897 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3944

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3945 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4004

Query: 492  TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
            T G   YG+LG   ++  +  ++   +    V ++ACG+       LT    V++WG G 
Sbjct: 4005 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4064

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4103



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3842 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAV---------- 3891

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3892 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3947

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3948 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4007

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 4008 KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCL 4051


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T ++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TEIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 31/283 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG   ++G LG  G E  +           +P+ ++S 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR----------VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+F WG+   G+LG G +    + PQL++ L G+    
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           VA G  H+  +T SG ++ WG   +  G LG   +   ++P  +  +L    + YI CG 
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYICCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T ++CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV- 310

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                        S G+++++G G  G+LG G    R  P  V
Sbjct: 311 ------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 3699 GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3748

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 3749 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3808

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 3809 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3865

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 3866 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 3913

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 3914 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3973

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 3974 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4032

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 4033 TNAIQRPRLVAALQGKKVNRVACG 4056



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG      + V            T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3834

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 3835 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3891

Query: 353  LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 3892 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3951

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 3952 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3997

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 3998 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4057

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 4058 AHTLAW-STSKPASAGK 4073



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 206/435 (47%), Gaps = 46/435 (10%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG-GRLGHG-READVSHPQ-LI 290
            +P   E+  AL+V  +A G++    VT +G++++ GE +     G G     V  P   I
Sbjct: 2733 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXI 2792

Query: 291  EILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
              LS   V+ VA   G   T      G +++WG+G  + G LGH S+    +PR +   L
Sbjct: 2793 TALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEG--DDGKLGHFSR----MPRLIEA-L 2845

Query: 349  DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
                +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+ V+ L G R  +V
Sbjct: 2846 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2905

Query: 409  SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL----FPECVA 464
            +CG    A  +  TD            G +F+ GDGD  ++G G   P +     P+ + 
Sbjct: 2906 ACGS-RDAQTLALTDE-----------GLVFSLGDGDLWKIGPG---PEVKGCNIPQNIE 2950

Query: 465  PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAE 520
             L  + +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +
Sbjct: 2951 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGK 3007

Query: 521  SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
              V     GA H  A+T + +VY WG   +GQ G+G       PTLV  L+ +++ RV C
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3067

Query: 581  GLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGL-VFCKACSSRKSLKAAL 639
            G + +       W ++VD +   S H P  F   R       + V   A SS  S K + 
Sbjct: 3068 GSSHSV-----AW-TTVDVAT-PSVHEPVLFMTARDPLGASYIGVPSDADSSAASNKISG 3120

Query: 640  APSINKPYRVCDDCF 654
            A  + K    C  C 
Sbjct: 3121 AIKMRKCLSACXSCL 3135



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 148/290 (51%), Gaps = 35/290 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF WGEG  +G LG         FSR     +P+ +E+     + +IACG+ H+  +T
Sbjct: 2819 GKVFSWGEG-DDGKLG--------HFSR-----MPRLIEALKTKRIRDIACGSSHSAALT 2864

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG--EYHTCAVTRSGDLY 318
              GE+++WG    GRLGHG       P+++++L G  V  VACG  +  T A+T  G ++
Sbjct: 2865 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2924

Query: 319  TWGDGTYNSGLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            + GDG      +G G +V  C IP+ +   L+G  +  I CG   +  +T +G ++T+G 
Sbjct: 2925 SLGDGDLWK--IGPGPEVKGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2981

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSC-GVWHTAAVVVATDSSSSSPSGSTSCG 436
            G +  LGHG  +    P+ VE LRG +    SC G  H  AV   TDS           G
Sbjct: 2982 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAV---TDS-----------G 3027

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
            +++ WGD D G+ G+G       P  V  L  + I +VACG   SVA TT
Sbjct: 3028 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3077



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 3827 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 3875

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 3876 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 3933

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 3934 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 3991

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 3992 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4050

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 4051 NRVACGSAHTLAW------STSKPA---SAGKL 4074



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 3698 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 3752

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 3753 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 3800

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 3801 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3860

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 3861 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 3919

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 3920 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3959



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 85/205 (41%), Gaps = 53/205 (25%)

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            S +T   K+F+WG  DK +LG    +    P     L   N+ QVA G     A+T  G 
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2763

Query: 490  VYTMGSAA-YGQLGVPVADGLVPTR----------------------------VDGEI-- 518
            VY  G A  +   G+ ++ G VP                              VDG++  
Sbjct: 2764 VYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFS 2823

Query: 519  ------------------AESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
                               E+     + ++ACG+ H AALTS+ ++YTWG G  G+LGHG
Sbjct: 2824 WGEGDDGKLGHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2883

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCG 581
            D   +  P +V  L   +V +V CG
Sbjct: 2884 DNTTQLKPKMVKVLLGHRVIQVACG 2908



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 3698 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 3747

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
                T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 3748 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3803

Query: 487  SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 3804 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3863

Query: 547  KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 3864 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3907


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 27/389 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H +A   +S ++Y++G G NGQLG G   NR SP  V         + +  +++    
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYF 362

Query: 589 CLHKWVSSVDHSVC-----SSCHNPFGFR 612
           C+ +  S  D S        +C  P  FR
Sbjct: 363 CVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 27/389 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H +A   +S ++Y++G G NGQLG G   NR SP  V         + +  +++    
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYF 362

Query: 589 CLHKWVSSVDHSVC-----SSCHNPFGFR 612
           C+ +  S  D S        +C  P  FR
Sbjct: 363 CVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 27/389 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H +A   +S ++Y++G G NGQLG G   NR SP  V         + +  +++    
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYF 362

Query: 589 CLHKWVSSVDHSVC-----SSCHNPFGFR 612
           C+ +  S  D S        +C  P  FR
Sbjct: 363 CVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 181/379 (47%), Gaps = 29/379 (7%)

Query: 214  FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
              G G H  G      +  L+P+  +S    +   + CG     ++   G + S GE S 
Sbjct: 754  LFGAGRH--GQLAEVGSGVLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSY 809

Query: 274  GRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYTWGDGTYNSGLL 330
            GRLG G   D +    I  L G  V+ +A     + H  A+T +G++++WGDG Y  G L
Sbjct: 810  GRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY--GKL 867

Query: 331  GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
            GHG+      PR++   L G  +  ++CG  H+AVVT  G LFTFG G +G LGHG   +
Sbjct: 868  GHGNSDRQRRPRQIEA-LRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTN 926

Query: 391  TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW--GDGDKGR 448
              IP  V  L      +V+CG+ HT  V+V+ D+             L  W  GDGD G+
Sbjct: 927  KKIPERVMALENYIIGQVACGLNHT--VIVSQDN-------------LTVWACGDGDYGK 971

Query: 449  LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY-GQLGVPVAD 507
            LG G    +  P  +  L    I +++CG   + ALT  G ++  G     G      + 
Sbjct: 972  LGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSP 1031

Query: 508  GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
               P  V   ++   + +++ GA H  ALTS   VYTWG   +GQLG G  ++   PTLV
Sbjct: 1032 SFNPQVVTA-LSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTLV 1090

Query: 568  DFLKDKQVKRVVCGLNFTA 586
            + L  K ++++  G   +A
Sbjct: 1091 ESLSGKNIRQISAGRTHSA 1109



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 185/401 (46%), Gaps = 58/401 (14%)

Query: 255  HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
            HA+ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  VACG  H+  VT  
Sbjct: 846  HAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID 905

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG-HLF 373
            G L+T+G G Y  G LGHGS  +  IP +V   L+   +  ++CGL HT +V+     ++
Sbjct: 906  GKLFTFGYGDY--GRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVSQDNLTVW 962

Query: 374  TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
              GDG +G LG G   + + P ++E L  +   ++SCG   TAA+              T
Sbjct: 963  ACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAAL--------------T 1008

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
              GKLF +G             P   P+ V  L   +I  ++ G + ++ALT+ G VYT 
Sbjct: 1009 WDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTW 1068

Query: 494  GSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            GS   GQLG+   + +  PT V+  ++   + +++ G  H AA +            +  
Sbjct: 1069 GSNTDGQLGLGHTNHVQEPTLVE-SLSGKNIRQISAGRTHSAAWSC----------EHDD 1117

Query: 553  LGHGDKDNRNS-PTLVDFLKDKQV----KRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
             GH       S P+  D L D  V     R+V    F+ +I              S+   
Sbjct: 1118 AGHTLLGTPESIPSQYDLLADVSVLDARGRLVVLSKFSDLI--------------SASWP 1163

Query: 608  PFGFRRKRHNC-----YNCGLVFCKACSSRKSLKAALAPSI 643
               +++K+H+      Y CG     +C S  ++++ L P +
Sbjct: 1164 LLNYQQKQHSTSDVTPYTCG----NSCFSSSAIRSILLPRV 1200



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 14/235 (5%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            + CG   T ++ + G + + G+GS+G LG G+   ++    +  L+G    +++      
Sbjct: 785  VVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSD 844

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
               +  T++           G++F+WGDGD G+LGHG+ + +  P  +  L  + + QVA
Sbjct: 845  GHAIALTEN-----------GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVA 893

Query: 476  CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            CG   S  +T  G ++T G   YG+LG     +  +P RV   +    + +VACG  H  
Sbjct: 894  CGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTV 952

Query: 535  ALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             ++  +  V+  G G  G+LG G    + SPT ++ L    +K++ CG  FTA +
Sbjct: 953  IVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAAL 1007



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 139/317 (43%), Gaps = 38/317 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     P+ +E+    +V  +ACG +H+ +VT
Sbjct: 854  GEVFSWGDG-DYGKLGHGNS------DRQRR---PRQIEALRGQEVVQVACGFKHSAVVT 903

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++F++G    GRLGHG   +   P+ +  L    +  VACG  HT  V++  +L  W
Sbjct: 904  IDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQD-NLTVW 962

Query: 321  --GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
              GDG Y  G LG G   +   P K+   L  + +  ISCG   TA +T  G LF FG  
Sbjct: 963  ACGDGDY--GKLGIGGTSAKTSPTKIE-VLSRVGIKKISCGAQFTAALTWDGKLFMFGQD 1019

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
                        +  P+ V  L       +S G  HT A+              TS G +
Sbjct: 1020 RMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIAL--------------TSKGIV 1065

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            +TWG    G+LG G       P  V  L  +NI Q++ G   S A +          A +
Sbjct: 1066 YTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCE-----HDDAGH 1120

Query: 499  GQLGVPVADGLVPTRVD 515
              LG P +   +P++ D
Sbjct: 1121 TLLGTPES---IPSQYD 1134



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY- 531
           +V CG + +  +  +G V + G  +YG+LG   +D          +    V+++A     
Sbjct: 784 KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 532 --HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             H  ALT   +V++WG G  G+LGHG+ D +  P  ++ L+ ++V +V CG   +A++ 
Sbjct: 844 DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVT 903

Query: 590 L 590
           +
Sbjct: 904 I 904


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T+++CG  HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TQIACGRQHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 201 GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 250

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
             G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 251 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 310

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 311 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 367

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LGH D      P+ VE L+G R   V+CG      + +  D +            +
Sbjct: 368 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDT------------V 415

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 416 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 475

Query: 499 GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 476 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 534

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
            +    P LV  L+ K+V RV CG
Sbjct: 535 TNAIQRPRLVAALQGKKVNRVACG 558



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 277 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 336

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 337 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 393

Query: 353 LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  ++CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 394 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 453

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 454 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 499

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 500 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 559

Query: 531 YHVAALTSTSKVYTWGK 547
            H  A  STSK  + GK
Sbjct: 560 AHTLAW-STSKPASAGK 575



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169 DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 329 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 377

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              D L PK VE+     V ++ACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 378 E--DQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 435

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 436 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 493

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 494 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 552

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 553 NRVACGSAHTLA------WSTSKPA---SAGKL 576



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314 SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 200 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 254

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 255 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 302

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 303 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 362

Query: 492 TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
           T G   YG+LG     D L P  V+       V+ VACG+       LT    V++WG G
Sbjct: 363 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTVWSWGDG 421

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 422 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 461



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 200 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 249

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
               T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 250 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 305

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 306 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 365

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           KG  G+LGH D +++  P LV+ L+  +V  V CG      +CL
Sbjct: 366 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 409


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 180/373 (48%), Gaps = 27/373 (7%)

Query: 217  GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL 276
            G    +GYS S      +P  VES        I CG     ++   G + + GE S GRL
Sbjct: 3338 GQLAELGYSAS------VPVQVESFSI--ARKIICGQNCTFVIQSDGTVLACGEGSYGRL 3389

Query: 277  GHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
            G G   D+    +I  L G  +  +A     + H+ A+  SG++++WGDG +  G LGHG
Sbjct: 3390 GQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF--GKLGHG 3447

Query: 334  SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
            +      PR++   L    +  ++CG  H+AVVTS G LFTFG+G FG LG G   +  +
Sbjct: 3448 NPDRQRRPRQIEA-LQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKL 3506

Query: 394  PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
            P  V  L G R  +V+CG+ HTA V             ST    ++T+G+GD G+LG G 
Sbjct: 3507 PERVMALEGYRIGQVACGLNHTACV-------------STDGMTVWTFGEGDYGKLGLGY 3553

Query: 454  KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
               +L P+ V  + +  I +V CG  L++ LT  G V+  G        +     +   +
Sbjct: 3554 ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQ 3613

Query: 514  VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
            +   +++  +E++A G  HV  LT+  KV  WG    GQLG         P ++  L DK
Sbjct: 3614 IMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDK 3673

Query: 574  QVKRVVCGLNFTA 586
             ++++  G   +A
Sbjct: 3674 GIRQISTGRTHSA 3686



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 184/359 (51%), Gaps = 37/359 (10%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV++WG   ++    G + ++          L+P  V+S M   V  +  G      +  
Sbjct: 349 DVYVWGSNSSHQLAEGNQEKI----------LMP--VKSKMFTQVQQVEAGQYCTFAIHW 396

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
            G + + G+ S GRLG G  ++ S P+ I +L  V  +L +    + HT A+  +G +Y+
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRI-LLDCVVKKLSSSKGSDGHTLALAETGVVYS 455

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+  +   P +++G   G  + YI  G  H+A VT  G L+T+G+G 
Sbjct: 456 WGDGDY--GKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGD 513

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGHGD  +  +P +V  L  + +  V+CG  HT  +VV+ D  +           ++
Sbjct: 514 HGRLGHGDSNARYVPTQVAGLAEVGS--VACGSSHT--LVVSKDGKT-----------VW 558

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           ++G G+ G+LG G+      P+ V  L    I +V  G   S+ALTT+G VYT GS A  
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI- 617

Query: 500 QLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            LG   AD +V  P  V+ ++A+  + +++ G  H  ALT   +V+ WG  + GQ G G
Sbjct: 618 -LGKGSADAIVNLPMYVE-DLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQG 674



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 16/236 (6%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            I CG   T V+ S G +   G+GS+G LG G+         + +L+G   T +       
Sbjct: 3362 IICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDL------- 3414

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
             A  V +D  S + + S   G++F+WGDGD G+LGHG+ + +  P  +  L  E + QVA
Sbjct: 3415 -ATSVGSDGHSLALAES---GEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVA 3470

Query: 476  CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VEEVACGAYHV 533
            CG   S  +T+ G ++T G+  +G+LG+  VA+  +P RV     E + + +VACG  H 
Sbjct: 3471 CGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMA--LEGYRIGQVACGLNHT 3528

Query: 534  AAL-TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            A + T    V+T+G+G  G+LG G    +  P  V+ + +  +K+V CG + T  +
Sbjct: 3529 ACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFL 3584



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 27/216 (12%)

Query: 378  GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            G    LG+    S S+P +VE+    R  ++ CG       V+ +D            G 
Sbjct: 3338 GQLAELGY----SASVPVQVESFSIAR--KIICG--QNCTFVIQSD------------GT 3377

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHDLSVALTTSGHVYT 492
            +   G+G  GRLG G+ +       ++ L    I  +A      GH  S+AL  SG V++
Sbjct: 3378 VLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGH--SLALAESGEVFS 3435

Query: 493  MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
             G   +G+LG    D     R    +    V +VACG  H A +TS  K++T+G G  G+
Sbjct: 3436 WGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGK 3495

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            LG G   N+  P  V  L+  ++ +V CGLN TA +
Sbjct: 3496 LGLGSVANKKLPERVMALEGYRIGQVACGLNHTACV 3531



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 58/225 (25%)

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           V  A +++S S  G      ++ WG     +L  G++E  L P  V   +   + QV  G
Sbjct: 330 VCSAVETTSESEVGVYEKSDVYVWGSNSSHQLAEGNQEKILMP--VKSKMFTQVQQVEAG 387

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRV---------------DGE---I 518
              + A+   G V   G  +YG+LG+   ++  +P R+               DG    +
Sbjct: 388 QYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLAL 447

Query: 519 AESFV-----------------------------------EEVACGAYHVAALTSTSKVY 543
           AE+ V                                   + +  G  H AA+T   K+Y
Sbjct: 448 AETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLY 507

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           TWG+G +G+LGHGD + R  PT V  L   +V  V CG + T ++
Sbjct: 508 TWGEGDHGRLGHGDSNARYVPTQVAGL--AEVGSVACGSSHTLVV 550



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 214  FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
            F+ G +    +S  R+     P+ + S     + ++A G  H + +T  G++  WG    
Sbjct: 3591 FVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGE 3650

Query: 274  GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G+LG    + V HP++I  LS   +  ++ G  H+ A
Sbjct: 3651 GQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAA 3687


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V E+ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +    +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG +H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYYHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V  + CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTEIACGRQHTS 307



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSF 226
           R    +   +   ++V+ S  G AH    +  G V+ WG   ++G LG  G E  +    
Sbjct: 72  RKKPEQVVALDAQNIVAVSC-GEAHTLALNDKGQVYAWGLD-SDGQLGLVGSEECIR--- 126

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVS 285
                  +P+ ++S   + +  +ACG  H++ ++K  E+F WG+   G+LG G +    +
Sbjct: 127 -------VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            PQL++ L G+    VA G  H+  +T SG ++ WG   +  G LG   +   ++P  + 
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK 237

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L    + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           T ++CG  HT+  V              S G+++++G G  G+LG G    R  P  V
Sbjct: 297 TEIACGRQHTSTFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA-VVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT+  V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 176/370 (47%), Gaps = 34/370 (9%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +F WG  I     LGG E           +  +P+ V+   A +V  IACG  + V +TK
Sbjct: 1   MFCWGSTIHGELGLGGIEDE---------NIFMPREVDFIEASNVEQIACGENYTVAITK 51

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +G+++S G    G+LGH  E      QLI  L       +ACG  HT AV   G L++WG
Sbjct: 52  EGKVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWG 109

Query: 322 DGTYNSGLLGHGSKVSCW--IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
                +G LG  S V C   +PR +   L    +  I+CG  H+  +T+ G L+ +G   
Sbjct: 110 CNM--NGQLGLNS-VDCTERVPRMIK-VLGTNVIVQIACGTEHSIALTNDGELYAWGSNR 165

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G + +T I P+ + TL  +    ++CG +HT  +              +  G +
Sbjct: 166 EGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVI--------------SKSGAV 211

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F+WG    G+LG  D + R  P  +  L +  +C   CG + SV LT  G V+T G+  Y
Sbjct: 212 FSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMY 271

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGD 557
           GQLG       +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+  
Sbjct: 272 GQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRA 331

Query: 558 KDNRNSPTLV 567
             +  +P +V
Sbjct: 332 SQSATTPQVV 341



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 153/324 (47%), Gaps = 29/324 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   + ++  P+ ++ +   NVE +ACGE +T A+T+ G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             Y  G LGH    K    IP      LD      I+CG  HT  V   G LF++G    
Sbjct: 61  NDY--GQLGHEKARKRLQLIP-----GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMN 113

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG +    +  +PR ++ L      +++CG  H+ A+              T+ G+L+
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIAL--------------TNDGELY 159

Query: 440 TWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG   +G+LG G      + P+ ++ L    I  +ACG   ++ ++ SG V++ G   +
Sbjct: 160 AWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+  V    +P ++   +  + V    CG      LT    V+T G G  GQLGHG+
Sbjct: 220 GQLGLNDVQQRNLPCQLR-TLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGN 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
             N   P  V  L    V ++ CG
Sbjct: 279 TTNEILPRQVMELMGSTVTQISCG 302



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 29/281 (10%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   +    LG     + ++PR+V   ++  ++  I+CG  +T  +T  G +++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDF-IEASNVEQIACGENYTVAITKEGKVYSCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTT---RVSCGVWHTAAVVVATDSSSSSPSGST 433
           +  +G LGH         + ++ + GL      +++CG  HT AV               
Sbjct: 60  NNDYGQLGH-----EKARKRLQLIPGLDAFVFRKIACGNCHTLAV--------------N 100

Query: 434 SCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             G+LF+WG    G+LG    D   R+ P  +  L    I Q+ACG + S+ALT  G +Y
Sbjct: 101 EWGQLFSWGCNMNGQLGLNSVDCTERV-PRMIKVLGTNVIVQIACGTEHSIALTNDGELY 159

Query: 492 TMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
             GS   GQLG+       + P R+   +A   +  +ACG YH   ++ +  V++WG+  
Sbjct: 160 AWGSNREGQLGLGSYTTTEIKPKRIS-TLAAVPIAFIACGGYHTIVISKSGAVFSWGRNT 218

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            GQLG  D   RN P  +  L++ +V    CG  F+  + +
Sbjct: 219 FGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTM 259



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG     G LG G        S  T  + PK + +  A+ +  IACG  H ++++
Sbjct: 156 GELYAWGSN-REGQLGLG--------SYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G +FSWG  + G+LG       + P  +  L    V    CGE  +  +T  G ++T 
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTC 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G Y  G LGHG+  +  +PR+V   L G  ++ ISCG  HT A+V S G ++ +G G 
Sbjct: 267 GAGMY--GQLGHGNTTNEILPRQVM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 380 FGALGHGDHISTSIPREV 397
            G LG+    S + P+ V
Sbjct: 324 AGQLGNRASQSATTPQVV 341


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 199/426 (46%), Gaps = 77/426 (18%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            DVF+WG G           R G       + L+P    S        + CG     ++  
Sbjct: 1123 DVFLWGAG-----------RHGQLAEAGRNILVPTTAPSFS--QAQQVVCGQNCTFVIQP 1169

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELV-ACG-EYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    +I  L G V  +LV +CG + H+ A+T SG+++
Sbjct: 1170 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1229

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG----------------------IHLSY- 355
            +WGDG Y  G LGHG+      PR++   L G                      +HL   
Sbjct: 1230 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQ 1286

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR---TTRVSCGV 412
            +SCG  H+AVVT+ G LFTFG+G +G LG G+  +  +P  V  L G +      V+CG+
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID-ENI 471
             HT  +VV+ D              ++ +GDGD G+LG G+   +  P+  A ++    +
Sbjct: 1347 NHT--LVVSADGM-----------MVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 472  CQ--------------VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
            CQ              VACG   SVALT  G V+T G      +G+P +      R    
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNHNRPQQL 1451

Query: 518  IAES--FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
             A S   V++VA GA H  AL+ST  VY WG  + GQLG G  ++   PT+V  L+ K +
Sbjct: 1452 PALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHI 1511

Query: 576  KRVVCG 581
             +V  G
Sbjct: 1512 HQVSAG 1517



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 69/369 (18%)

Query: 264  EIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWG 321
            ++F WG    GR  HG+ A+     L+     S    + V CG+  T  +  +G +   G
Sbjct: 1123 DVFLWG---AGR--HGQLAEAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACG 1177

Query: 322  DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGL-WHTAVVTSAGHLFTFGDG 378
            +G+Y  G LG G+     +   +S  L G  ++ +  SCG   H+  +T +G +F++GDG
Sbjct: 1178 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1234

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRV-----------------------SCGVWHT 415
             +G LGHG+      PR++E L+G    +V                       SCG  H+
Sbjct: 1235 DYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHS 1294

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A V              T+ GKLFT+G+GD GRLG G+   +  PE VA L    I QVA
Sbjct: 1295 AVV--------------TADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVA 1340

Query: 476  ---CGHDLSVALTTSGH-VYTMGSAAYGQLGVPVADGLVPTRVDGEIAES---------- 521
               CG + ++ ++  G  V+  G   YG+LG+  +      +V   I +S          
Sbjct: 1341 NVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVD 1400

Query: 522  -----FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
                  +++VACG     ALT   +V+T+G+     L      N N P  +  L    V+
Sbjct: 1401 VLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQ 1460

Query: 577  RVVCGLNFT 585
             V  G   T
Sbjct: 1461 DVAVGAEHT 1469



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 150/339 (44%), Gaps = 85/339 (25%)

Query: 250  ACGAR-HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV------- 301
            +CG+  H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  V       
Sbjct: 1212 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAG 1271

Query: 302  ----------------ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
                            +CG  H+  VT  G L+T+G+G Y  G LG G+  +  +P +V+
Sbjct: 1272 AGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVA 1329

Query: 346  GNLDGIHL---SYISCGLWHTAVVTSAGHL-FTFGDGSFGALGHGDHISTSIPR------ 395
              L+G  +   + ++CGL HT VV++ G + + FGDG +G LG G+  + S P+      
Sbjct: 1330 A-LEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVIL 1388

Query: 396  ---------EVETLRGLRTTRVSCGVWHTAAV-------------VVATDSSSSS----- 428
                     +V+ L G+   +V+CG   + A+             ++    S +      
Sbjct: 1389 QSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRP 1448

Query: 429  ---PSGS-----------------TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
               P+ S                 +S G ++ WG   +G+LG G       P  V  L  
Sbjct: 1449 QQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQG 1508

Query: 469  ENICQVACGHDLSVALTT-SGHVYTMGSAAYGQLGVPVA 506
            ++I QV+ G   S A T  S      GS+   QLG+PVA
Sbjct: 1509 KHIHQVSAGRCHSAAWTAPSLPPRAPGSSVPLQLGLPVA 1547



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 61/279 (21%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGVW 413
            + CG   T V+   G +   G+GS+G LG G+     +   +  L+G   T++  SCG  
Sbjct: 1157 VVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG-- 1214

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
                    +D  S +    T  G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q
Sbjct: 1215 --------SDGHSMA---LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ 1263

Query: 474  V-----------------------ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGL 509
            V                       +CG   S  +T  G ++T G+  YG+LG+   ++  
Sbjct: 1264 VGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 1323

Query: 510  VPTRVDG----EIAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSP 564
            +P RV      +I +  V  VACG  H   +++    V+ +G G  G+LG G+   ++SP
Sbjct: 1324 LPERVAALEGYQIGQ--VANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSP 1381

Query: 565  TL---------------VDFLKDKQVKRVVCGLNFTAII 588
             +               VD L    +K+V CG  F+  +
Sbjct: 1382 QVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVAL 1420



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 27/201 (13%)

Query: 237  AVESTMALDVHNIACGARHAVLVTKQGE-IFSWGEESGGRLGHGREADVSHPQL------ 289
            A+E      V N+ACG  H ++V+  G  ++++G+   G+LG G     S PQ+      
Sbjct: 1330 ALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQ 1389

Query: 290  ---------IEILSGVNVELVACGEYHTCAVTRSGDLYTWGD----GTYNSGLLGHGSKV 336
                     +++L G++++ VACG   + A+T+ G ++T+G     G   S    H    
Sbjct: 1390 SPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNR-- 1447

Query: 337  SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
                P+++   L G+H+  ++ G  HT  ++S G ++ +G  S G LG G       P  
Sbjct: 1448 ----PQQLPA-LSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTV 1502

Query: 397  VETLRGLRTTRVSCGVWHTAA 417
            V  L+G    +VS G  H+AA
Sbjct: 1503 VTMLQGKHIHQVSAGRCHSAA 1523



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)

Query: 169  DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIAN-GFLGGGEHRVG---- 223
            +R +A E ++I     V++ + G  H    S   + +W  G  + G LG G         
Sbjct: 1326 ERVAALEGYQIG---QVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQ 1382

Query: 224  -YSFSRQTDALLPK-AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
             ++   Q+  L  +  V+    + +  +ACG + +V +TK G +F++G++    L   R 
Sbjct: 1383 VWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRA 1442

Query: 282  ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
             + + PQ +  LSGV+V+ VA G  HT A++ +GD+Y WG  +     LGH + V     
Sbjct: 1443 RNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR---E 1499

Query: 342  RKVSGNLDGIHLSYISCGLWHTAVVTS 368
              V   L G H+  +S G  H+A  T+
Sbjct: 1500 PTVVTMLQGKHIHQVSAGRCHSAAWTA 1526



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 40/211 (18%)

Query: 418  VVVATDSSSSSPSGSTSCGKLFTW-----------GDGDKGRLGHGDKEPRLFPECVAPL 466
            ++V T + S S +    CG+  T+           G+G  GRLG G+ +       ++ L
Sbjct: 1142 ILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 1201

Query: 467  IDENICQV--ACGHD-LSVALTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESF 522
                + Q+  +CG D  S+ALT SG V++ G   YG+LG   +D    P +++    E  
Sbjct: 1202 QGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV 1261

Query: 523  VE----------------------EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            V+                      +++CG  H A +T+  K++T+G G  G+LG G+  N
Sbjct: 1262 VQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 1321

Query: 561  RNSPTLVDFLKDKQ---VKRVVCGLNFTAII 588
            +  P  V  L+  Q   V  V CGLN T ++
Sbjct: 1322 KKLPERVAALEGYQIGQVANVACGLNHTLVV 1352



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 438  LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +F WG G  G+L    +   +     AP   +   QV CG + +  +  +G V   G  +
Sbjct: 1124 VFLWGAGRHGQLAEAGRN--ILVPTTAPSFSQAQ-QVVCGQNCTFVIQPNGTVLACGEGS 1180

Query: 498  YGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAY-HVAALTSTSKVYTWGKGANGQ 552
            YG+LG   +D L    V + + G +    V   +CG+  H  ALT + +V++WG G  G+
Sbjct: 1181 YGRLGQGNSDDLHVLTVISALQGFVVTQLV--TSCGSDGHSMALTESGEVFSWGDGDYGK 1238

Query: 553  LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            LGHG+ D +  P  ++ L+ ++V +V  G    A +C
Sbjct: 1239 LGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 467  IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--VE 524
            +DE I   A        L     V+  G+  +GQL     + LVPT      A SF   +
Sbjct: 1101 LDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLAEAGRNILVPT-----TAPSFSQAQ 1155

Query: 525  EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV--CG 581
            +V CG      +     V   G+G+ G+LG G+ D+ +  T++  L+   V ++V  CG
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 1214


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 757  GTIYGWGHN-HRGQLGGIEG---------AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 806

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
              G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 807  ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 866

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 867  SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 923

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 924  RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT------------V 971

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 972  WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1031

Query: 499  GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 1032 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1090

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCG 581
             +    P LV  L+ K+V RV CG
Sbjct: 1091 TNAIQRPRLVAALQGKKVNRVACG 1114



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235  PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 833  PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 892

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 893  LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 949

Query: 353  LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 950  VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 1009

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 1010 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1055

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 1056 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 1115

Query: 531  YHVAALTSTSKVYTWGK 547
             H  A  STSK  + GK
Sbjct: 1116 AHTLAW-STSKPASAGK 1131



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169  DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 885  DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 933

Query: 228  RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
               D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 934  E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 991

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 992  VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 1049

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 1050 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 1108

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             RV+CG  HT A       S+S P+   S GKL
Sbjct: 1109 NRVACGSAHTLAW------STSKPA---SAGKL 1132



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +E+     + +IACG+ H+  +T  GE+++WG    GRLGHG       P+++++L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 295 GVNVELVACG--EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           G  V  VACG  +  T A+T  G +++WGDG +  G LG G    C IP+ +   L+G  
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF--GKLGRGGSEGCNIPQNIE-RLNGQG 122

Query: 353 LSYISCGLWHTAVVTSAG-----HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           +  I CG   +  +T +G      ++ +GD   G  G+G       P  V+ L G + TR
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 408 VSCGVWHTAA---VVVATDS 424
           V+CG  H+ A   V VAT S
Sbjct: 183 VACGSSHSVAWTTVDVATPS 202



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 30/230 (13%)

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           PR +E L+  R   ++CG  H+AA+              TS G+L+TWG G+ GRLGHGD
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAAL--------------TSSGELYTWGLGEYGRLGHGD 51

Query: 454 KEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-V 510
              +L P+ V  L+   + QVACG     ++ALT  G V++ G   +G+LG   ++G  +
Sbjct: 52  NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 111

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTS-----TSKVYTWGKGANGQLGHGDKDNRNSPT 565
           P  ++  +    V ++ CGA    ALT      T +VY WG   +GQ G+G       PT
Sbjct: 112 PQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT 170

Query: 566 LVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKR 615
           LV  L+ +++ RV CG + +       W ++VD +   S H P  F+  R
Sbjct: 171 LVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHEPVLFQTAR 213



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 20/210 (9%)

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
           ++C  PR +   L    +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+
Sbjct: 1   MNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 59

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
            V+ L G R  +V+CG    A  +  TD            G +F+WGDGD G+LG G  E
Sbjct: 60  MVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSE 107

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSG-----HVYTMGSAAYGQLGVPVAD-GL 509
               P+ +  L  + +CQ+ CG   S+ALT SG      VY  G   +GQ G        
Sbjct: 108 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNR 167

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTST 539
            PT V G +    +  VACG+ H  A T+ 
Sbjct: 168 KPTLVQG-LEGQKITRVACGSSHSVAWTTV 196



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314  SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 756  SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 810

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 811  LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 858

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 859  LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 918

Query: 492  TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
            T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 919  TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 977

Query: 549  ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 978  DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1017



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 25/203 (12%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A +T RI    +   SSH +A     S G+++ WG G   G LG G++         T  
Sbjct: 11  ALKTKRIR--DIACGSSHSAA---LTSSGELYTWGLG-EYGRLGHGDN---------TTQ 55

Query: 233 LLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           L PK V+  +   V  +ACG+R A  + +T +G +FSWG+   G+LG G     + PQ I
Sbjct: 56  LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 115

Query: 291 EILSGVNVELVACGEYHTCAVTRSG-----DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           E L+G  V  + CG   + A+T+SG      +Y WGD  +  G  G+G+      P  V 
Sbjct: 116 ERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDH--GQQGNGTTTVNRKPTLVQ 173

Query: 346 GNLDGIHLSYISCGLWHTAVVTS 368
           G L+G  ++ ++CG  H+   T+
Sbjct: 174 G-LEGQKITRVACGSSHSVAWTT 195



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 805

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
               T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 806 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 861

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 862 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 921

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 922 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 965


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/328 (36%), Positives = 176/328 (53%), Gaps = 26/328 (7%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEI 292
           +P   E+  AL+V  +A G++    VT +G++++ GE + GRLG G     V  P+ I  
Sbjct: 20  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 79

Query: 293 LSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           LS   V+ VA   G  H  A+T  G ++ WG+G  + G LGH S+++C  PR +   L  
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             +  I+CG  H+A +TS+G L+T+G G +G LGHGD+ +   P+ V+ L G R  +V+C
Sbjct: 137 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 196

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G    A  +  TD            G +F+WGDGD G+LG G  E    P+ +  L  + 
Sbjct: 197 GS-RDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 244

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEV 526
           +CQ+ CG   S+ALT SG V+T G   Y +LG    V V     P  V+G   +  V  V
Sbjct: 245 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVH-V 300

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLG 554
           A GA H  A+T + +VY WG   +GQ G
Sbjct: 301 AVGALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 147/304 (48%), Gaps = 26/304 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   NG LG G         RQ  AL    V+      VH+   G RHA  +T
Sbjct: 49  GKVYACGE-ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA---VHS---GGRHATALT 101

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++F WGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 102 VDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 161

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 162 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 218

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 219 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 264

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG GD  RLGHG       P+ V  L  + I  VA G    +A+T SG VY  G   +
Sbjct: 265 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 324

Query: 499 GQLG 502
           GQ G
Sbjct: 325 GQQG 328



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 169/329 (51%), Gaps = 28/329 (8%)

Query: 268 WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS 327
           WG     +LG  + + +  P   E LS +NV  VA G     AVT  G +Y  G+ T  +
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT--N 59

Query: 328 GLLGHG-SKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFGALG 384
           G LG G S  +  IPR+++  L    +  ++   G  H   +T  G +F +G+G  G LG
Sbjct: 60  GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLG 118

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           H   ++   PR +E L+  R   ++CG  H+AA+              TS G+L+TWG G
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL--------------TSSGELYTWGLG 164

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQLG 502
           + GRLGHGD   +L P+ V  L+   + QVACG     ++ALT  G V++ G   +G+LG
Sbjct: 165 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 224

Query: 503 VPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
              ++G  +P  ++  +    V ++ CGA    ALT +  V+TWGKG   +LGHG   + 
Sbjct: 225 RGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 283

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
             P +V+ L+ K++  V  G    A+ CL
Sbjct: 284 RKPQVVEGLRGKKIVHVAVG----ALHCL 308


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 301 GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 350

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
             G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 351 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 410

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 411 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 467

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 515

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 516 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 575

Query: 499 GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 576 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 634

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
            +    P LV  L+ K+V RV CG
Sbjct: 635 TNAIQRPRLVAALQGKKVNRVACG 658



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 377 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 436

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 437 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 493

Query: 353 LSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 494 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 553

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 554 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 599

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 600 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 659

Query: 531 YHVAALTSTSKVYTWGK 547
            H  A  STSK  + GK
Sbjct: 660 AHTLAW-STSKPASAGK 675



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169 DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 429 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 477

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 478 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 535

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 536 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 593

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 594 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 652

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 653 NRVACGSAHTLAW------STSKPA---SAGKL 676



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 21/279 (7%)

Query: 314 SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 300 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 354

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 355 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 402

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 403 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 462

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
           T G   YG+LG   ++  +  ++   +    V ++ACG+       LT    V++WG G 
Sbjct: 463 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 522

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 561



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 300 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 349

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
               T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 350 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 405

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 406 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 465

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 466 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 509


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 184/391 (47%), Gaps = 29/391 (7%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +  +V ++ CG+RH V V   G +++ G    G+LGH +      P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--RKPEQVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L    +  V+CGE HT A+   G +++WG   Y    L    +    +PR +  +L  +
Sbjct: 80  ALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEY-IRVPRNIK-SLSDV 137

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSC 410
            +  ++CG  H+  ++    +F++G   +G LG G  I     PR +++L G+    ++ 
Sbjct: 138 QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAA 197

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H+ A+ ++              G +F WG    G+LG  D+  R  P  +  L  + 
Sbjct: 198 GGGHSFALTIS--------------GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK 243

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           I  + CG D + ALT  G V+T G+  YGQLG    +  V  R   E+  S V ++ACG 
Sbjct: 244 IIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGR 303

Query: 531 YHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCGLNFTAI 587
            H  A   +S ++Y++G G NGQLG G   NR SP  V  ++L  +   R +   N    
Sbjct: 304 QHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEAN--GC 361

Query: 588 ICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
            CL +  S  D S        +CH P  FRR
Sbjct: 362 YCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           I+    G G ++ G    + +TD  +P  ++S  +  + +I CG  H   +TK+G +F++
Sbjct: 207 ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH       +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS ++   P  V GN
Sbjct: 325 GQLGTGSTINRKSPFTVKGN 344



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 12/176 (6%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      I++N+  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              GQLG   +    P +V G +    +  V+CG  H  AL    +V++WG    GQ+G 
Sbjct: 61  NDLGQLGHDKSRR-KPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118

Query: 556 GDKDNR-NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
              +     P  +  L D Q+ +V CG +       H    S D  + S   N +G
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHH-------HSLALSKDSDIFSWGQNQYG 167


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 37/388 (9%)

Query: 220 HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
           H  G S + Q     P+A        +  +ACG  H++ + + GE+++ G  + G+LGH 
Sbjct: 11  HPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHE 70

Query: 280 READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSC 338
           RE +   P+ I  L+  ++  VACGE H+ A++  G L++WG G+   G LGH + + S 
Sbjct: 71  REGN--KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS--DGQLGHTTTEDSV 126

Query: 339 WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREV 397
            IPR +   L+   +  +SCG WH   + + G  FT+G    G LG G    S + P+ V
Sbjct: 127 AIPRLIK-KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRV 185

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           ++L G+   +V+ G  H+ A+ ++              G +F WG  + G+LG  D+  R
Sbjct: 186 KSLEGIPLAQVAAGGAHSFALSLS--------------GAVFGWGRNNAGQLGLSDETDR 231

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
             P  V  L  + +  ++CG + +  LT SG V+T G+ ++GQLG    +  V  R   E
Sbjct: 232 QSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLE 291

Query: 518 IAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLV--------- 567
           +  S V ++ACG  H  A   +S  +Y +G GA GQLG G   N   P+ V         
Sbjct: 292 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNG 351

Query: 568 ------DFLKDKQVKRVVCGLNFTAIIC 589
                 D  K   VK +  G + T ++C
Sbjct: 352 QLSSRADSFKYHIVKHIFSGGDQTFVLC 379



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 192/430 (44%), Gaps = 47/430 (10%)

Query: 265 IFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +  WG  S G  G      +  V+ PQ    +S  +++ VACG  H+  +   G++YT G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 322 DGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
             T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G G
Sbjct: 61  SNT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAG 112

Query: 379 SFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           S G LGH     S +IPR ++ L      +VSCG WH  A  +A D            G+
Sbjct: 113 SDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA--LAAD------------GQ 158

Query: 438 LFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218

Query: 497 AYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH
Sbjct: 219 NAGQLGLSDETDRQSPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFT-----------AIICLHKWVSSVDHSVCSS 604
              ++  +P  V  L   +V ++ CG   T           A  C  +      H+    
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVK 337

Query: 605 CHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKL 664
           C +P       HN    G +  +A S +  +   +    ++ + +C          D ++
Sbjct: 338 CPSPVKGHWAAHN----GQLSSRADSFKYHIVKHIFSGGDQTFVLCSKYENSSPADDFRI 393

Query: 665 KRTSGYTSVV 674
              + YTS++
Sbjct: 394 MNQAQYTSLI 403



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 26/253 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG         G + ++G++ +  + A+ P+ ++      +  ++CG  H + + 
Sbjct: 104 GQLFSWG--------AGSDGQLGHTTTEDSVAI-PRLIKKLNQQMILQVSCGNWHCMALA 154

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             G+ F+WG+   G+LG G+E    + PQ ++ L G+ +  VA G  H+ A++ SG ++ 
Sbjct: 155 ADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFG 214

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG    N+G LG   +     P  V   L    + YISCG  HTAV+T +G +FTFG GS
Sbjct: 215 WGRN--NAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 271

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           FG LGH        PR V  L G   T+++CG  HT A V              S G ++
Sbjct: 272 FGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-------------PSSGLIY 318

Query: 440 TWGDGDKGRLGHG 452
            +G G +G+LG G
Sbjct: 319 AFGCGARGQLGTG 331



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   +G LG     +G  F  Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 157 GQFFTWGQN-RHGQLG-----LGKEFPSQAS---PQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G++  G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 268 GAGSF--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 184/391 (47%), Gaps = 29/391 (7%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +  +V ++ CG+RH V V   G +++ G    G+LGH +      P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--RKPEQVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L    +  V+CGE HT A+   G +++WG   Y    L    +    +PR +  +L  +
Sbjct: 80  ALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEY-IRVPRNIK-SLSDV 137

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSC 410
            +  ++CG  H+  ++    +F++G   +G LG G  I     PR +++L G+    ++ 
Sbjct: 138 QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAA 197

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H+ A+ ++              G +F WG    G+LG  D+  R  P  +  L  + 
Sbjct: 198 GGGHSFALTIS--------------GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK 243

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           I  + CG D + ALT  G V+T G+  YGQLG    +  V  R   E+  S V ++ACG 
Sbjct: 244 IIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGR 303

Query: 531 YHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCGLNFTAI 587
            H  A   +S ++Y++G G NGQLG G   NR SP  V  ++L  +   R +   N    
Sbjct: 304 QHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEAN--GC 361

Query: 588 ICLHKWVSSVDHSVC-----SSCHNPFGFRR 613
            CL +  S  D S        +CH P  FRR
Sbjct: 362 YCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           I+    G G ++ G    + +TD  +P  ++S  +  + +I CG  H   +TK+G +F++
Sbjct: 207 ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH       +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS ++   P  V GN
Sbjct: 325 GQLGTGSTINRKSPFTVKGN 344



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 84/198 (42%), Gaps = 19/198 (9%)

Query: 438 LFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +  WG+   G+LG G  D+E  L P      I++N+  V CG   +V +   G VYT G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              GQLG   +    P +V G +    +  V+CG  H  AL    +V++WG    GQ+G 
Sbjct: 61  NDLGQLGHDKSRR-KPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118

Query: 556 GDKDNR-NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRK 614
              +     P  +  L D Q+ +V CG +       H    S D  + S   N +G    
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHH-------HSLALSKDSDIFSWGQNQYG---- 167

Query: 615 RHNCYNCGLVFCKACSSR 632
                  GL   K C+ R
Sbjct: 168 ---QLGLGLEIKKECAPR 182


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 59/413 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG G   G LG          + + +   P+ VE     ++  +      ++ +++ 
Sbjct: 45  VYAWGYG-NFGQLG---------LANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQD 94

Query: 263 GEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G++++WG+  GG LGH      ++  P+L+E L  + ++ ++CG +H  A+++ G+LYTW
Sbjct: 95  GKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTW 154

Query: 321 GDGTYNSGLLGH-----GSKVSC-------------WIPRKVSGNLDGIHLSYISCGLWH 362
           G+  +  G LGH      +KV                +P KV  +L+GI    +SCG   
Sbjct: 155 GNKDH--GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQ-SLNGIKCKQVSCGGQF 211

Query: 363 TAVVTSAGHLFTFGDGSFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           T V+T  G +++FG+   G LG+  +      P+++  L+ +    + CG   +AAV   
Sbjct: 212 TVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNI--INIDCGQQFSAAV--- 266

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      +S GK++TWG+ D G+LG+     +  P  V       I  ++CG +  
Sbjct: 267 -----------SSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFI 315

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            AL+  G ++T G    GQLG    + L  P ++  E  E  + +V CG  H A LT  +
Sbjct: 316 AALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQI--EFKEKII-KVDCGGTHTAFLTQNN 372

Query: 541 KVYTWGKGANGQLGHGDKDN-----RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           ++Y +G+G  GQLG G+        R +P +V+F K  +V  V CG  +T  I
Sbjct: 373 QLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAI 425



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 181/352 (51%), Gaps = 50/352 (14%)

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           Q  +++WG  + G+LG   E +   PQ +E LS  N+  V   +  + A+++ G +YTWG
Sbjct: 42  QKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101

Query: 322 DGTYNSGLLGHGSKVSC-WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
                 G+LGH    S   I  ++   L+ I +  ISCG +H A ++  G L+T+G+   
Sbjct: 102 KNK--GGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159

Query: 381 GALGHG-----------------DHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           G LGH                  D+   S +P +V++L G++  +VSCG   T  +    
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL---- 215

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGH-----GDKEPRLFPECVAPLIDENICQVACG 477
                     T  G+++++G+  KG+LG+     G+ +P+  P+       +NI  + CG
Sbjct: 216 ----------TENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL------QNIINIDCG 259

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAAL 536
              S A+++SG VYT G+  +GQLG   +     P +V G      +  ++CG   +AAL
Sbjct: 260 QQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKII-NISCGDNFIAAL 318

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           ++  K++TWG G +GQLGH ++++  +P  ++F K+K +K V CG   TA +
Sbjct: 319 SNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEF-KEKIIK-VDCGGTHTAFL 368



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 53/396 (13%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           N N++ S  E  ++S  +++   ++ S        G V+ WG+    G LG   H    S
Sbjct: 60  NENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKN-KGGILG---HYDITS 115

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH------- 278
           F    + + P+ VE    + +  I+CG  H   +++ GE+++WG +  G+LGH       
Sbjct: 116 F----NMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSN 171

Query: 279 -------GREADVSH----PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS 327
                   +  D +     P  ++ L+G+  + V+CG   T  +T +G++Y++G+     
Sbjct: 172 KVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSM--K 229

Query: 328 GLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
           G LG+ S +   + P+K+    D  ++  I CG   +A V+S+G ++T+G+   G LG+ 
Sbjct: 230 GQLGYQSEETGNFQPKKIP---DLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNN 286

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
             I  + P +V    G +   +SCG    AA+              ++ GKLFTWG G+ 
Sbjct: 287 QSIYQARPNQVTGFGGNKIINISCGDNFIAAL--------------SNEGKLFTWGYGND 332

Query: 447 GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PV 505
           G+LGH ++     P+ +     E I +V CG   +  LT +  +Y  G    GQLG+   
Sbjct: 333 GQLGHSNRNDLYAPKQIE--FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGEN 390

Query: 506 ADGLVPTRVDGEIAESF----VEEVACGAYHVAALT 537
            +     R   +I E F    V +V CG  +  A+T
Sbjct: 391 IESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 23/209 (11%)

Query: 415 TAAVVVATDSSSSSPSGSTSCGK-LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           TA+++V +   + S    T   K ++ WG G+ G+LG  ++  +  P+ V  L D NI +
Sbjct: 21  TASLLVTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIK 80

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLG---VPVADGLVPTRVDGEIAESFVEEVACGA 530
           V     +S+AL+  G VYT G    G LG   +   + + P  V+ ++    +++++CG 
Sbjct: 81  VKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVE-KLENIQIKQISCGP 139

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS------------------PTLVDFLKD 572
           +H+AA++   ++YTWG   +G+LGH  +   N                   PT V  L  
Sbjct: 140 FHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNG 199

Query: 573 KQVKRVVCGLNFTAIICLHKWVSSVDHSV 601
            + K+V CG  FT ++  +  V S  +S+
Sbjct: 200 IKCKQVSCGGQFTVVLTENGEVYSFGNSM 228


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG  H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG  H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYCHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 185/371 (49%), Gaps = 41/371 (11%)

Query: 177 FRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANG----FLGGGEHRVGYSFSRQTDA 232
           F +S    +SS S+ SA       GDV++WG G         LG           +  D 
Sbjct: 631 FNVSDICSISSGSYYSAA--LTENGDVYMWGRGSVKNPPVPVLG---------IPQIEDQ 679

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LLP  +ES    D+  ++ G  H+  V   GE+ +WG    G+LGHG   +   P++I+ 
Sbjct: 680 LLPIKLESLT--DIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQS 737

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+   +  V CGE HT  +T++G +YTWG   Y  G LG G       P  V+  L+  +
Sbjct: 738 LTSFWITQVQCGEKHTICLTKNGKVYTWGSSEY--GQLGLGDTTRYCKPMPVTA-LEKYN 794

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  I+ G  H AV+T++  +  FG+G+  A+G    I  SIP  V +L+ L   ++ CG 
Sbjct: 795 VLQIASGSTHCAVLTNSKEVLVFGNGA--AMGAASII--SIPTLVPSLKYLHIDKLCCGH 850

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           + TAA+              + CG ++TWG G +  LGHG+ +    P+ V  L +++I 
Sbjct: 851 YSTAAI--------------SECGDVYTWGTGQE--LGHGNNQTESTPKLVEALRNQSIR 894

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           Q++CG   +  LT SG ++T G  ++GQLG    D   P +++     +F+  V+CG  +
Sbjct: 895 QISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQNKPKKIESLTKTTFI-SVSCGENY 953

Query: 533 VAALTSTSKVY 543
             AL  T++ +
Sbjct: 954 NIALFDTTRSF 964



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 165/342 (48%), Gaps = 31/342 (9%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGH---GREADVSHPQLIEILSGVNVELVACGEYHTCA 310
           R A+ +     + +WG  S  +LG     +E     P+ +   +  ++  ++ G Y++ A
Sbjct: 589 RSAIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAA 648

Query: 311 VTRSGDLYTWGDGTYNSG---LLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           +T +GD+Y WG G+  +    +LG        +P K+    D   +  +S G +H+A V 
Sbjct: 649 LTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD---IVVVSIGFYHSAAVR 705

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G L T+G G  G LGHGD  +   P+ +++L     T+V CG  HT  +         
Sbjct: 706 ANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICL--------- 756

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  GK++TWG  + G+LG GD      P  V  L   N+ Q+A G      LT S
Sbjct: 757 -----TKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNS 811

Query: 488 GHVYTMGS-AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
             V   G+ AA G   +     LVP+     +    ++++ CG Y  AA++    VYTWG
Sbjct: 812 KEVLVFGNGAAMGAASIISIPTLVPS-----LKYLHIDKLCCGHYSTAAISECGDVYTWG 866

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G   +LGHG+    ++P LV+ L+++ ++++ CG   TA +
Sbjct: 867 TGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFL 906



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 92/236 (38%), Gaps = 25/236 (10%)

Query: 367 TSAGHLFTFGDGSFGALGH---GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           TS G L T+G  S   LG        S   P  +          +S G +++AA+     
Sbjct: 596 TSRG-LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAAL----- 649

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGR-----LGHGDKEPRLFPECVAPLIDENICQVACGH 478
                    T  G ++ WG G         LG    E +L P  +  L D  I  V+ G 
Sbjct: 650 ---------TENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD--IVVVSIGF 698

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             S A+  +G + T G    GQLG       V  +V   +   ++ +V CG  H   LT 
Sbjct: 699 YHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTK 758

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
             KVYTWG    GQLG GD      P  V  L+   V ++  G    A++   K V
Sbjct: 759 NGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEV 814


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG  H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG  H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYCHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG D     GL+G  S+    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG  H+  ++ A  +F +G   +G LG G D    + P+ +++L G+   +V+
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ACG
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 29/329 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G +G  + I   +PR +++L  ++  +V+CG  H+ A+  A++              +F
Sbjct: 116 LGLVGSEECIR--VPRNIKSLSDIQIVQVACGYCHSLALSKASE--------------VF 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG ++  G   +
Sbjct: 160 CWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G  GQLGH  
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             +  +P  V  L    V ++ CG   T+
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHTS 307



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+ +  V+  G 
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F++ VA G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQ---NKY---GQLGLGTDCKKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 325 GQLGTG---STSNRKSPFTVKG 343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + + D  +P  ++S  +  +  I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 325 GQLGTGSTSNRKSPFTVKGN 344


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 29/384 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG     G LGG E              +P   E+   L    +  G +    VT
Sbjct: 223 GTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 272

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLY 318
             G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  G++Y
Sbjct: 273 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 332

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T+G G
Sbjct: 333 SWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 389

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LGH D      P+ VE L+G R   ++CG      + +  D +            +
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDT------------V 437

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           ++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G   Y
Sbjct: 438 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 497

Query: 499 GQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQLG G 
Sbjct: 498 HRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 556

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
            +    P LV  L+ K+V RV CG
Sbjct: 557 TNAIQRPRLVAALQGKKVNRVACG 580



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 299 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 358

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 359 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 415

Query: 353 LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 416 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 475

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 476 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 521

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 522 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 581

Query: 531 YHVAALTSTSKVYTWGK 547
            H  A  STSK  + GK
Sbjct: 582 AHTLAW-STSKPASAGK 597



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 28/273 (10%)

Query: 169 DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 351 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 399

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 400 E--DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 457

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 458 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 515

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 516 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 574

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            RV+CG  HT A       S+S P+   S GKL
Sbjct: 575 NRVACGSAHTLA------WSTSKPA---SAGKL 598



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 21/279 (7%)

Query: 314 SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 222 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 276

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 277 LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 324

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 325 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 384

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGA 549
           T G   YG+LG   ++  +  ++   +    V ++ACG+       LT    V++WG G 
Sbjct: 385 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 444

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 483



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 222 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 271

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
               T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 272 ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 327

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 328 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 387

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 388 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 431


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 162/322 (50%), Gaps = 22/322 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V ++ CG RH V V   G +++ G    G+LGH  E     P+ +  L   N+  V+CGE
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVTVSCGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            HT A+   G +Y WG      G LG  G++    +PR +  +L  I +  ++CG +H+ 
Sbjct: 94  AHTLALNDKGQVYAWGFAV--DGQLGLSGTEEYTRVPRNIK-SLSDIQIVQVACGYFHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++    +F++G   +G LG G ++   + P+ +++L G+   +++ G  H+  +     
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVL----- 205

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T  G +F WG    G+LG  D+  R  P  +  L  + I  ++CG D + A
Sbjct: 206 ---------TLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKV 542
           LT  G V+T G+  YGQLG       +  R   E+  + V ++ACG  H +A   ST ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSP 564
           Y++G G NGQLG G   NR SP
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSP 338



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 37/303 (12%)

Query: 236 KAVESTMALDVHNI---ACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIE 291
           K  E   ALD  NI   +CG  H + +  +G++++WG    G+LG  G E     P+ I+
Sbjct: 73  KRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIK 132

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            LS + +  VACG +H+ A+++  ++++WG   Y  G LG G +       ++  +L GI
Sbjct: 133 SLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKY--GQLGLGYEYKKQASPQIIKSLLGI 190

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             + I+ G  H+ V+T +G +F +G   FG LG  D     +P  +++LR  +   +SCG
Sbjct: 191 PFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCG 250

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             HTAA+              T  G +FT+G G  G+LGH      + P  V  L+   +
Sbjct: 251 EDHTAAL--------------TKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIV 296

Query: 472 CQVACGHDLSVALTTS-GHVYTMGSAAYGQLGV----------PVA------DGLVPTRV 514
            Q+ACG   + A   S G +Y+ G    GQLG+          PV       +G +P   
Sbjct: 297 TQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKGNWLPYNGQIPLNS 356

Query: 515 DGE 517
           DGE
Sbjct: 357 DGE 359



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+         V+ V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V G LD  ++  +SCG  HT  +   G ++ +G    G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G    T +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + + +  P+ +  L+     Q+A G   S  LT SG V+  G   +GQ
Sbjct: 162 GQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  ++CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V ++ CG   T+
Sbjct: 281 HEINPRKVFELMGNIVTQIACGRQHTS 307



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 31/280 (11%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG  + +G LG  G E      ++R     +P+ ++S 
Sbjct: 86  IVTVSCGEAHTLALNDKGQVYAWGFAV-DGQLGLSGTE-----EYTR-----VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+FSWG+   G+LG G E    + PQ+I+ L G+    
Sbjct: 135 SDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  H+  +T SG ++ WG   +  G LG   +   ++P  +  +L    + YISCG 
Sbjct: 195 IAAGGAHSFVLTLSGAVFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYISCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVP 311

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           +T             G+++++G G  G+LG G    R  P
Sbjct: 312 ST-------------GRIYSFGLGGNGQLGMGTTSNRKSP 338



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PR+ S  ++   +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNK-KVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKRPEQVGALDAQNIVTVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+    V++ G 
Sbjct: 104 QVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F + +A G  H   LT +  V+ WG+   GQL
Sbjct: 164 NKYGQLGLGYEYKKQASPQIIKSLLGIPFAQ-IAAGGAHSFVLTLSGAVFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 184/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGHGRE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G D  S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHRGQLSATADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 159/322 (49%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T   G LGHG + +   P ++ G L   H+ +++CG  H+  ++  G LF++G GS G 
Sbjct: 61  NT--KGQLGHGREGN--KPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ FTW
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQFFTW 161

Query: 442 GDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G   P +  P+ V  L    + QVA G   S AL+ SG V+  G    GQ
Sbjct: 162 GKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221

Query: 501 LGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH   +
Sbjct: 222 LGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L   +V ++ CG
Sbjct: 281 DEVNPRRVLELMGSEVTQIACG 302



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G         +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKDFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G++    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ W  G  N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGW--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKDFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 176/347 (50%), Gaps = 36/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  ++CG+ ++  +T  G++  WG    G+LG G   D   P++   LS  NV  VAC +
Sbjct: 44  ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVIQVACSD 101

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHG------SKVSCWIPRKVSGNLDGIHLSYISCG 359
            HT A+  +G+LYTW  G   +G LGHG      S      P KV   L+G  +  +SCG
Sbjct: 102 RHTAAILSNGELYTW--GCSKNGKLGHGQFELSISNNVVSQPMKVKA-LEGEKVIQVSCG 158

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +HT  +T      T+G G  G LGHGD      P+ +E+L GL    +SCG  HTA ++
Sbjct: 159 SYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGH 478
           V               GKL+ +G G  G+LG G  +  L P  +  PL D  I +V+ G 
Sbjct: 219 VT--------------GKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGS 264

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
             S A+T  G VYT G    G+LG     P  D L P R+   + ++F+ +++CG  H  
Sbjct: 265 QHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLS-NLEKAFIVDISCGNSHSV 321

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRVVC 580
           AL+    +YTWG   N  +GHG +  + N P+    L++K + +VVC
Sbjct: 322 ALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVC 366



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 178/368 (48%), Gaps = 45/368 (12%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+S V   S++ +A     + GD+ +WG G   G LG         F    D L+P+   
Sbjct: 43  SISKVSCGSNYSAA---ITNSGDLILWGYG-GCGQLG---------FGNLEDCLVPRVNL 89

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR------EADVSHPQLIEIL 293
           S    +V  +AC  RH   +   GE+++WG    G+LGHG+         VS P  ++ L
Sbjct: 90  SLK--NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL 147

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  V  V+CG YHT  +T      TWG G    G LGHG     + P+ +  +L G+ +
Sbjct: 148 EGEKVIQVSCGSYHTGCLTDDKKALTWGLGL--QGRLGHGDTQDIFTPKLIE-SLAGLPI 204

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGV 412
             ISCG  HTA++   G L+ FG G+FG LG G      IPR +E  L  ++ T+VS G 
Sbjct: 205 KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGS 264

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH---GDKEPRLFPECVAPLIDE 469
            H+AAV              T CGK++TWG G  GRLGH   G +   L P+ ++ L   
Sbjct: 265 QHSAAV--------------TKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKA 308

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  ++CG+  SVAL+  G +YT G       G+      +P++    +    + +V C 
Sbjct: 309 FIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPSK-HPILQNKNIVQVVCS 367

Query: 530 AYHVAALT 537
           + H  AL+
Sbjct: 368 SSHSIALS 375



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 167/328 (50%), Gaps = 32/328 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG    G+ G   E     P L++ L  ++ +  V+CG  ++ A+T SGDL  WG G
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
               G LG G+   C +PR    NL   ++  ++C   HTA + S G L+T+G    G L
Sbjct: 70  --GCGQLGFGNLEDCLVPRV---NLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKL 124

Query: 384 GHGDH---ISTSI---PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           GHG     IS ++   P +V+ L G +  +VSCG +HT  +   TD             K
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCL---TDDK-----------K 170

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
             TWG G +GRLGHGD +    P+ +  L    I +++CG   +  L  +G +Y  G  A
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGA 230

Query: 498 YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH- 555
           +G+LG    D  L+P  ++G + +  + +V+ G+ H AA+T   KVYTWG+G  G+LGH 
Sbjct: 231 FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHI 288

Query: 556 --GDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G + +  SP  +  L+   +  + CG
Sbjct: 289 FNGPEHDFLSPKRLSNLEKAFIVDISCG 316



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 145/293 (49%), Gaps = 30/293 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG    NG LG G+  +  S +  +  +  KA+E    + V   +CG+ H   +T
Sbjct: 111 GELYTWGCS-KNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV---SCGSYHTGCLT 166

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              +  +WG    GRLGHG   D+  P+LIE L+G+ ++ ++CG +HT  +  +G LY +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G +  G LG GS     IPR + G L+ I ++ +S G  H+A VT  G ++T+G G  
Sbjct: 227 GGGAF--GKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282

Query: 381 GALGH---GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G LGH   G       P+ +  L       +SCG  H+ A+              +  G 
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVAL--------------SDVGD 328

Query: 438 LFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
           ++TWG      +GHG +   P + P     L ++NI QV C    S+AL+  G
Sbjct: 329 IYTWGMTK--NIGHGIQGIHPNM-PSKHPILQNKNIVQVVCSSSHSIALSDIG 378



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 32/288 (11%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSK---VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           +++SG +  WG   Y      HGSK   VS   P  V G      +S +SCG  ++A +T
Sbjct: 5   LSKSG-VVVWGSTEYGQ----HGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSAAIT 58

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           ++G L  +G G  G LG G+     +PR   +L+     +V+C   HTAA++        
Sbjct: 59  NSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAIL-------- 108

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF------PECVAPLIDENICQVACGHDLS 481
                 S G+L+TWG    G+LGHG  E  +       P  V  L  E + QV+CG   +
Sbjct: 109 ------SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             LT      T G    G+LG      +   ++   +A   ++E++CG +H A L  T K
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGK 222

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDF-LKDKQVKRVVCGLNFTAII 588
           +Y +G GA G+LG G  D+   P L++  L+D Q+ +V  G   +A +
Sbjct: 223 LYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAV 270



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 27/228 (11%)

Query: 372 LFTFGDGSFGALG-HGDHISTSIPREVETLRGLRT-TRVSCGVWHTAAVVVATDSSSSSP 429
           +  +G   +G  G  G+ +S   P  V+ LR L + ++VSCG  ++AA+           
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSAAI----------- 57

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
              T+ G L  WG G  G+LG G+ E  L P     L  +N+ QVAC    + A+ ++G 
Sbjct: 58  ---TNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL--KNVIQVACSDRHTAAILSNGE 112

Query: 490 VYTMGSAAYGQLG-----VPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           +YT G +  G+LG     + +++ +V  P +V     E  ++ V+CG+YH   LT   K 
Sbjct: 113 LYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQ-VSCGSYHTGCLTDDKKA 171

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            TWG G  G+LGHGD  +  +P L++ L    +K + CG + TAI+ +
Sbjct: 172 LTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 189/373 (50%), Gaps = 33/373 (8%)

Query: 186 SSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD 245
           +S+SH +A+    S G+V++WG    +    GG+ ++            PK   S +  D
Sbjct: 383 NSTSHSNANLS-GSCGEVYVWGSNCTHQLAEGGQEKI----------TTPKY--SAVFTD 429

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ--LIEILSGVNVELVAC 303
              +  G     L+   G + + G+ S GRLG G   + S P+  L +      +     
Sbjct: 430 CQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKG 489

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            + H+ A+T +G++Y+WGDG Y  G LGHG+  +  IP+ V G L G  +  +S G  H+
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDY--GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHS 547

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A VT  G L+T+GDG FG LGH    S + P +V+++  +    V+CG  HT AV     
Sbjct: 548 AAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAV----- 600

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
               S  G T    ++++G G+ G+LGHGD   +L P+ +  L    I +VACG   S+A
Sbjct: 601 ----SQDGKT----IWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLA 652

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           +T+SG +Y  G  A    G      L P  V+   ++  V ++ACG  HV ALT  S+VY
Sbjct: 653 VTSSGQLYAWGCGAILGCGSAEYTALRPRLVEDLQSKRMV-DIACGDSHVIALTHESEVY 711

Query: 544 TWGKGANGQLGHG 556
            WG  A GQ G G
Sbjct: 712 AWGNNAMGQCGQG 724



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 31/274 (11%)

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G++Y WG    +   L  G +     P+  +   D      +  G + T ++ S G +  
Sbjct: 397 GEVYVWGSNCTHQ--LAEGGQEKITTPKYSAVFTD---CQQVEAGQFCTFLIYSDGTVGA 451

Query: 375 FGDGSFGALGHGDHISTSIPR----EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            G GS+G LG GD  + S+P+    + + ++ + +++ S G  H+ A+            
Sbjct: 452 CGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDG--HSLAL------------ 497

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTTSGH 489
             T+ G++++WGDGD G+LGHG    +  P+ V  PL+ + +  V+ G+  S A+T  G 
Sbjct: 498 --TTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGE 555

Query: 490 VYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGK 547
           +YT G   +G+LG         PT+V  +  ES V  VACG  H  A++   K ++++G 
Sbjct: 556 LYTWGDGEFGRLGHDYTSSKNFPTKV--QSIES-VGLVACGGSHTLAVSQDGKTIWSFGG 612

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G NG+LGHGD + +  P +++ L    +++V CG
Sbjct: 613 GENGKLGHGDTNRQLKPKVIEALNGLYIRKVACG 646



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 13/154 (8%)

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC------GHDLSVALTTSGHVYTMGS 495
           G G  GRLG GD      P+   PL D+   +         GH  S+ALTT+G VY+ G 
Sbjct: 453 GKGSYGRLGLGDSNNCSVPK--KPLFDKKYVKKISSSKGSDGH--SLALTTTGEVYSWGD 508

Query: 496 AAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
             YG+LG    +   +P  V G +    V+ V+ G  H AA+T   ++YTWG G  G+LG
Sbjct: 509 GDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLG 568

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H    ++N PT V  ++   V  V CG + T  +
Sbjct: 569 HDYTSSKNFPTKVQSIES--VGLVACGGSHTLAV 600



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 215 LGGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
            GGGE+ ++G+  + +   L PK +E+   L +  +ACG++ ++ VT  G++++WG   G
Sbjct: 610 FGGGENGKLGHGDTNRQ--LKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG--CG 665

Query: 274 GRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
             LG G  E     P+L+E L    +  +ACG+ H  A+T   ++Y WG+        GH
Sbjct: 666 AILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGH 725

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            ++     P++V G LDG+ +  +S G  H+   T+
Sbjct: 726 -AQSPITRPKRVIG-LDGVSVHQVSAGTSHSVAWTA 759


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 37/388 (9%)

Query: 220 HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
           H  G S + Q     P+A        +  +ACG  H++ + + GE+++ G  + G+LGH 
Sbjct: 11  HPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHE 70

Query: 280 READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSC 338
           RE +   P+ I  L+  ++  VACGE H+ A++  G L++WG G+   G LGH + + S 
Sbjct: 71  REGN--KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS--DGQLGHTTTEDSV 126

Query: 339 WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREV 397
            IPR +   L+   +  +SCG WH   + + G  FT+G    G LG G    S + P+ V
Sbjct: 127 AIPRLIK-KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRV 185

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           ++L G+   +V+ G  H+ A+ ++              G +F WG  + G+LG  D+  R
Sbjct: 186 KSLEGIPLAQVAAGGAHSFALSLS--------------GAVFGWGRNNAGQLGLSDETDR 231

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
             P  V  L  + +  ++CG + +  LT SG V+T G+ ++GQLG    +  V  R   E
Sbjct: 232 QSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLE 291

Query: 518 IAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLV--------- 567
           +  S V ++ACG  H  A   +S  +Y +G GA GQLG G   N   P+ V         
Sbjct: 292 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNG 351

Query: 568 ------DFLKDKQVKRVVCGLNFTAIIC 589
                 D  K   VK +  G + T ++C
Sbjct: 352 QLSSRADSFKYHIVKHIFSGGDQTFVLC 379



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 159/326 (48%), Gaps = 32/326 (9%)

Query: 265 IFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +  WG  S G  G      +  V+ PQ    +S  +++ VACG  H+  +   G++YT G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 322 DGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
             T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G G
Sbjct: 61  LNT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAG 112

Query: 379 SFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           S G LGH     S +IPR ++ L      +VSCG WH  A  +A D            G+
Sbjct: 113 SDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA--LAAD------------GQ 158

Query: 438 LFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218

Query: 497 AYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH
Sbjct: 219 NAGQLGLSDETDRQSPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG 581
              ++  +P  V  L   +V ++ CG
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACG 303



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG         G + ++G++ +  + A+ P+ ++    
Sbjct: 90  VACGESHSLALSD---QGQLFSWG--------AGSDGQLGHTTTEDSVAI-PRLIKKLNQ 137

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+   G+LG G+E    + PQ ++ L G+ +  VA
Sbjct: 138 QMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVA 197

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 198 AGGAHSFALSLSGAVFGWGRN--NAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEH 254

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GSFG LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 255 TAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 311

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 312 ----------PSSGLIYAFGCGARGQLGTG 331



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   +G LG     +G  F  Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 157 GQFFTWGQN-RHGQLG-----LGKEFPSQAS---PQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G++  G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 268 GAGSF--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + S G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ +YGQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 377 LCSKYENYSPAVDFRTMNQAH 397



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 161/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A+D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LASD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSYGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALASDGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS+G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+Y  G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGSY--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 183/390 (46%), Gaps = 35/390 (8%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            D ++WG         GG H  G         L P    S  +     I CG     ++  
Sbjct: 992  DAYLWG---------GGRH--GQLCEAGRSVLTPLHTSSFSS--AQQIICGQNCTFVIQA 1038

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELVAC--GEYHTCAVTRSGDLY 318
             G + + GE S GRLG G   D+    ++  L G V  +LV     + H+ A+T SG+++
Sbjct: 1039 NGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVF 1098

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG Y  G LGHG+      PR++   L G  +  I+CG  H+AVVT  G L TFG+G
Sbjct: 1099 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQIACGFKHSAVVTVDGKLLTFGNG 1155

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G   +   P  V+ L       V+CG+ HT  V         S  GST+    
Sbjct: 1156 DYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCV---------SADGSTT---- 1202

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS-AA 497
            + +GDGD G+LG G+   +  P  +  L    + +VACG   SVALT  G V T G    
Sbjct: 1203 WAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRL 1262

Query: 498  YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             GQ    +     P +V   +A  F+EEV  G+ H  ALTS   V+ WG  A+GQLG G 
Sbjct: 1263 IGQTEAQMRGHCTPQKVT-TLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGH 1321

Query: 558  KDNRNSPTLVDFLKDKQ-VKRVVCGLNFTA 586
                  P L+  L   + +K++  G   +A
Sbjct: 1322 TGTVREPQLLGGLGSSEPIKQISAGRTHSA 1351



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 25/286 (8%)

Query: 255  HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
            H++ +T+ GE+FSWG+   G+LGHG       P+ IE L G  V  +ACG  H+  VT  
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD 1146

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LF 373
            G L T+G+G Y  G LG G+  +   P +V   L+  H+ +++CGL HT  V++ G   +
Sbjct: 1147 GKLLTFGNGDY--GRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTW 1203

Query: 374  TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
             FGDG +G LG G+  + S P ++E L GL+  +V+CG   + A+              T
Sbjct: 1204 AFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL--------------T 1249

Query: 434  SCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
              G + TWG  D+  +G  + + R    P+ V  L    I +V  G + ++ALT+ G+V+
Sbjct: 1250 RDGFVLTWGQ-DR-LIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVW 1307

Query: 492  TMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAA 535
              G  A GQLG+    G V  P  + G  +   +++++ G  H AA
Sbjct: 1308 GWGLNADGQLGLG-HTGTVREPQLLGGLGSSEPIKQISAGRTHSAA 1352



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 32/283 (11%)

Query: 314  SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS------CGLWHTAVVT 367
            S D Y WG G        HG    C   R V   L  +H S  S      CG   T V+ 
Sbjct: 990  SCDAYLWGGGR-------HGQL--CEAGRSV---LTPLHTSSFSSAQQIICGQNCTFVIQ 1037

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            + G +   G+GS+G LG G+         V  L+G   T++   V      +  T+S   
Sbjct: 1038 ANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTES--- 1094

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                    G++F+WGDGD G+LGHG+ + +  P  +  L  E + Q+ACG   S  +T  
Sbjct: 1095 --------GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD 1146

Query: 488  GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTW 545
            G + T G+  YG+LG+  V +   P RV   +    +  VACG  H   +++  S  + +
Sbjct: 1147 GKLLTFGNGDYGRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAF 1205

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G G  G+LG G+   +++P  ++ L   +VK+V CG  F+  +
Sbjct: 1206 GDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL 1248


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 175/347 (50%), Gaps = 39/347 (11%)

Query: 201  GDVFIWGEGI----ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            GDV++WG G     A   LG           +  D LLP  +ES    DV +++ G  H 
Sbjct: 768  GDVYLWGRGAVKTPAVPILG---------IPQIEDQLLPFKLESLS--DVVSVSIGFCHG 816

Query: 257  VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
              V   GE+ +WG    G+LGHG   +   P++I+ L+   +  V CGE HT  +T++G 
Sbjct: 817  AAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK 876

Query: 317  LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
            +Y+WG   Y  G LG G       P +VS  L+  ++  I+ G  H AV+T++  +  FG
Sbjct: 877  VYSWGASEY--GQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFG 933

Query: 377  DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            +G+  A+G    +  S+P  V +L+ L   R+ CG + TAA+              T CG
Sbjct: 934  NGA--AMGAASVV--SLPTLVPSLKYLHIDRLCCGHYSTAAI--------------TECG 975

Query: 437  KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
             ++TWG G +  LGHG       P+ +  L +++I Q++CG   +  LT SG ++T G  
Sbjct: 976  DVYTWGTGQE--LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKD 1033

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            ++GQLG    D   P R++     +F+  V+CG  +  AL  T++ +
Sbjct: 1034 SFGQLGQMSGDQNKPKRIESLTKTTFI-SVSCGENYNVALFDTTRSF 1079



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 158/384 (41%), Gaps = 72/384 (18%)

Query: 254  RHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELV---ACGEYHTC 309
            R A+ +     + +WG  S  +LG    A D S P   E L   N+  +   + G Y++ 
Sbjct: 704  RSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPT-PERLPNFNIPDICSISSGSYYSS 762

Query: 310  AVTRSGDLYTWGDGTYNSG---LLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
             +T +GD+Y WG G   +    +LG        +P K+    D +    +S G  H A V
Sbjct: 763  VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVS---VSIGFCHGAAV 819

Query: 367  TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             + G L T+G G  G LGHGD  +   P+ +++L     T+V CG  HT  +        
Sbjct: 820  RANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICL-------- 871

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                  T  GK+++WG  + G+LG GD      P  V+ L   N+ Q+A G      LTT
Sbjct: 872  ------TKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTT 925

Query: 487  SGHVYTMGS-AAYGQLGVPVADGLVP---------------------------------- 511
            S  V   G+ AA G   V     LVP                                  
Sbjct: 926  SKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE 985

Query: 512  -------TRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
                   T    ++ E+     + +++CG  H A LT + +++T GK + GQLG    D 
Sbjct: 986  LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD- 1044

Query: 561  RNSPTLVDFLKDKQVKRVVCGLNF 584
            +N P  ++ L       V CG N+
Sbjct: 1045 QNKPKRIESLTKTTFISVSCGENY 1068



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 7/167 (4%)

Query: 433 TSCGKLFTWGDGDKGR-----LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
           T  G ++ WG G         LG    E +L P  +  L D  +  V+ G     A+  +
Sbjct: 765 TENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSIGFCHGAAVRAN 822

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G + T G    GQLG    +  +  ++   +   ++ +V CG  H   LT   KVY+WG 
Sbjct: 823 GELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGA 882

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
              GQLG GD    +SP  V  L+   V ++  G    A++   K V
Sbjct: 883 SEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  N+  VACGE
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGE 140

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 141 SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 197

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 198 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 255

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 256 ------------GAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 303

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 304 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 363

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 364 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFV 423

Query: 588 IC 589
           +C
Sbjct: 424 LC 425



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 171/346 (49%), Gaps = 39/346 (11%)

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGR-------EADVSHPQLIEILSGVNVELVACGE 305
           ++ +VL +K+ +I   G+E+G  LG  +          V+ PQ+   +S  +V+ VACG 
Sbjct: 34  SKMSVLNSKEKDI---GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGG 90

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            H+  +   G++YT G  T   G LGH   G+K     P ++ G L   ++ +++CG  H
Sbjct: 91  NHSVFLLEDGEVYTCGLNT--KGQLGHEREGNK-----PEQI-GALADQNIVHVACGESH 142

Query: 363 TAVVTSAGHLFTFGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           +  ++  G LF++G GS G LG      S ++PR ++ L      +VSCG WH  A  +A
Sbjct: 143 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LA 200

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDL 480
            D            G+ FTWG    G+LG G + P +  P+ V  L    + QVA G   
Sbjct: 201 AD------------GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 248

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           S AL+ SG V+  G    GQLG+    D   P  V     +  V  ++CG  H A LT +
Sbjct: 249 SFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKS 307

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             V+T+G G+ GQLGH   ++  +P  V  L   +V ++ CG   T
Sbjct: 308 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 353



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +    ++ ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 122 PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 181

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 182 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 239

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 299

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 300 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 345

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 346 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 375



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 136 VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 183

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 184 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 243

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ W  G  N+G LG   +     P  V   L    + YISCG  H
Sbjct: 244 AGGAHSFALSLSGAVFAW--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 300

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 301 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 357

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 358 ----------PSSGLIYAFGCGARGQLGTG 377



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 203 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 253

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F+WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 314 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 371 RGQLGTGHTCNVKCPSPVK 389


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 176/347 (50%), Gaps = 36/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  ++CG+ ++  +T  G++  WG    G+LG G   D   P++   LS  NV  VAC +
Sbjct: 44  ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVVQVACSD 101

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHG------SKVSCWIPRKVSGNLDGIHLSYISCG 359
            HT A+  +G+LYTW  G   +G LGHG      S      P KV   L+G  +  +SCG
Sbjct: 102 RHTAAILSNGELYTW--GCSKNGKLGHGQFELSISNNVVSQPMKVKA-LEGEKVIQVSCG 158

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +HT  +T      T+G G  G LGHGD      P+ +E+L GL    +SCG  HTA ++
Sbjct: 159 SYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGH 478
           V               GKL+ +G G  G+LG G  +  L P  +  PL D  I +V+ G 
Sbjct: 219 VT--------------GKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGS 264

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
             S A+T  G VYT G    G+LG     P  D L P R+   + ++F+ +++CG  H  
Sbjct: 265 QHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLS-NLEKAFIVDISCGNSHSV 321

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRVVC 580
           AL+    +YTWG   N  +GHG +  + N P+    L++K + +VVC
Sbjct: 322 ALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVC 366



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 178/368 (48%), Gaps = 45/368 (12%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+S V   S++ +A     + GD+ +WG G   G LG         F    D L+P+   
Sbjct: 43  SISKVSCGSNYSAA---ITNSGDLILWGYG-GCGQLG---------FGNLEDCLVPRVNL 89

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR------EADVSHPQLIEIL 293
           S    +V  +AC  RH   +   GE+++WG    G+LGHG+         VS P  ++ L
Sbjct: 90  SLK--NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL 147

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  V  V+CG YHT  +T      TWG G    G LGHG     + P+ +  +L G+ +
Sbjct: 148 EGEKVIQVSCGSYHTGCLTDDKKALTWGLGL--QGRLGHGDTQDIFTPKLIE-SLAGLPI 204

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGV 412
             ISCG  HTA++   G L+ FG G+FG LG G      IPR +E  L  ++ T+VS G 
Sbjct: 205 KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGS 264

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH---GDKEPRLFPECVAPLIDE 469
            H+AAV              T CGK++TWG G  GRLGH   G +   L P+ ++ L   
Sbjct: 265 QHSAAV--------------TKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKA 308

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  ++CG+  SVAL+  G +YT G       G+      +P++    +    + +V C 
Sbjct: 309 FIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPSK-HPILQNKNIVQVVCS 367

Query: 530 AYHVAALT 537
           + H  AL+
Sbjct: 368 SSHSIALS 375



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 167/328 (50%), Gaps = 32/328 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG    G+ G   E     P L++ L  ++ +  V+CG  ++ A+T SGDL  WG G
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
               G LG G+   C +PR    NL   ++  ++C   HTA + S G L+T+G    G L
Sbjct: 70  --GCGQLGFGNLEDCLVPRV---NLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKL 124

Query: 384 GHGDH---ISTSI---PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           GHG     IS ++   P +V+ L G +  +VSCG +HT  +   TD             K
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCL---TDDK-----------K 170

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
             TWG G +GRLGHGD +    P+ +  L    I +++CG   +  L  +G +Y  G  A
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGA 230

Query: 498 YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH- 555
           +G+LG    D  L+P  ++G + +  + +V+ G+ H AA+T   KVYTWG+G  G+LGH 
Sbjct: 231 FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHI 288

Query: 556 --GDKDNRNSPTLVDFLKDKQVKRVVCG 581
             G + +  SP  +  L+   +  + CG
Sbjct: 289 FNGPEHDFLSPKRLSNLEKAFIVDISCG 316



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 30/315 (9%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +SL +VV  +          S G+++ WG    NG LG G+  +  S +  +  +  KA+
Sbjct: 89  LSLKNVVQVACSDRHTAAILSNGELYTWGCS-KNGKLGHGQFELSISNNVVSQPMKVKAL 147

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           E    + V   +CG+ H   +T   +  +WG    GRLGHG   D+  P+LIE L+G+ +
Sbjct: 148 EGEKVIQV---SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPI 204

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + ++CG +HT  +  +G LY +G G +  G LG GS     IPR + G L+ I ++ +S 
Sbjct: 205 KEISCGGHHTAILLVTGKLYMFGGGAF--GKLGFGSTDDVLIPRLLEGPLEDIQITKVSL 262

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGH---GDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           G  H+A VT  G ++T+G G  G LGH   G       P+ +  L       +SCG  H+
Sbjct: 263 GSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHS 320

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQ 473
            A+              +  G ++TWG      +GHG +   P + P     L ++NI Q
Sbjct: 321 VAL--------------SDVGDIYTWGMTK--NIGHGIQGIHPNM-PSKHPILQNKNIVQ 363

Query: 474 VACGHDLSVALTTSG 488
           V C    S+AL+  G
Sbjct: 364 VVCSSSHSIALSDIG 378



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 32/288 (11%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSK---VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           +++SG +  WG   Y      HGSK   VS   P  V G      +S +SCG  ++A +T
Sbjct: 5   LSKSG-VVVWGSSEYGQ----HGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSAAIT 58

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           ++G L  +G G  G LG G+     +PR   +L+     +V+C   HTAA++        
Sbjct: 59  NSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAIL-------- 108

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF------PECVAPLIDENICQVACGHDLS 481
                 S G+L+TWG    G+LGHG  E  +       P  V  L  E + QV+CG   +
Sbjct: 109 ------SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             LT      T G    G+LG      +   ++   +A   ++E++CG +H A L  T K
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGK 222

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDF-LKDKQVKRVVCGLNFTAII 588
           +Y +G GA G+LG G  D+   P L++  L+D Q+ +V  G   +A +
Sbjct: 223 LYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAV 270



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 27/228 (11%)

Query: 372 LFTFGDGSFGALG-HGDHISTSIPREVETLRGLRT-TRVSCGVWHTAAVVVATDSSSSSP 429
           +  +G   +G  G  G+ +S   P  V+ LR L + ++VSCG  ++AA+           
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSAAI----------- 57

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
              T+ G L  WG G  G+LG G+ E  L P     L  +N+ QVAC    + A+ ++G 
Sbjct: 58  ---TNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL--KNVVQVACSDRHTAAILSNGE 112

Query: 490 VYTMGSAAYGQLG-----VPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           +YT G +  G+LG     + +++ +V  P +V     E  ++ V+CG+YH   LT   K 
Sbjct: 113 LYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQ-VSCGSYHTGCLTDDKKA 171

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            TWG G  G+LGHGD  +  +P L++ L    +K + CG + TAI+ +
Sbjct: 172 LTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 46/371 (12%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEY 306
            +ACG  H  +++  GE+F+WG  S G+LGHG       S P+ +E      + +++CG  
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE 1096

Query: 307  HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
            H+ AV +S  +Y+WG   Y  G LGHG      +P+K+     G  +  I+ G  HT V+
Sbjct: 1097 HSVAVDQSFQIYSWGSSRY--GQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 367  TSAGHLFTFGDGSFGALGHGDHISTSIPREVET-----LRGLRTTRVSCGVWHTAAVVVA 421
              +G LFTFG    G LG G+  + ++P  +ET     + G R T ++ G  H+   ++ 
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHS---IMC 1211

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
             D+           G +++WG   KG+LGHG+ E  L P+ +  L  + I +++CGH  +
Sbjct: 1212 LDN-----------GDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHT 1260

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALT 537
            VA++    VY  G   +  LG    +G     +  ++ E F    +E+V CG YH A +T
Sbjct: 1261 VAISELNSVYCWGQGEHMCLG----NGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVT 1316

Query: 538  STS------KVYTWGKGANGQLGHGDK-----DNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            +         VY  G G +G+LG G        ++  P ++  L    +     G  F+A
Sbjct: 1317 AAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSA 1376

Query: 587  II----CLHKW 593
            II     L+ W
Sbjct: 1377 IITNNGALYTW 1387



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 191/384 (49%), Gaps = 42/384 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G++F WG   + G LG G +   Y  +       P+ VE+  +  +  I+CG  H+V V 
Sbjct: 1051 GELFTWGNN-SQGQLGHGLNVGKYQST-------PRRVETFKSSPIIMISCGGEHSVAVD 1102

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILS-GVNVELVACGEYHTCAVTRSGDLYT 319
            +  +I+SWG    G+LGHG     + P+ IE  + G  V  +A G  HT  + +SGDL+T
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFT 1162

Query: 320  WGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIH---LSYISCGLWHTAVVTSAGHLFTF 375
            +G    +SG LG G+  +  +P ++ +  + GIH   ++ I+ G  H+ +    G ++++
Sbjct: 1163 FGWN--DSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSW 1220

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G  S G LGHG+   +  P++++ L+G    ++SCG +HT A+              +  
Sbjct: 1221 GANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI--------------SEL 1266

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS------GH 489
              ++ WG G+   LG+G  +  L P+ +   I++ I +V CG   +  +T +      G+
Sbjct: 1267 NSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGN 1326

Query: 490  VYTMGSAAYGQLG------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            VY  G   +G+LG       P  D   P  +    + + V   + G+   A +T+   +Y
Sbjct: 1327 VYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIV-GFSSGSEFSAIITNNGALY 1385

Query: 544  TWGKGANGQLGHGDKDNRNSPTLV 567
            TWG G  GQ+G+G  ++   PT +
Sbjct: 1386 TWGYGNFGQIGNGKTEDMWLPTKI 1409



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 23/159 (14%)

Query: 200  LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            L  V+ WG+G  +  LG G ++         + L PK +E  +   +  + CG  H   V
Sbjct: 1266 LNSVYCWGQG-EHMCLGNGSNK---------NELSPKMIEFFINKKIEKVVCGLYHTATV 1315

Query: 260  T------KQGEIFSWGEESGGRLGHGREA-----DVSHPQLIEILSGVNVELVACGEYHT 308
            T       +G ++  G    G+LG G +      D  HP +I  L+ +N+   + G   +
Sbjct: 1316 TAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFS 1375

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
              +T +G LYTWG G  N G +G+G     W+P K+S N
Sbjct: 1376 AIITNNGALYTWGYG--NFGQIGNGKTEDMWLPTKISLN 1412



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 12/133 (9%)

Query: 166  NSNDRSSAAETFRIS--LSSVVSSSSHG---SAHEDFDSLGDVFIWGEGIANGFLG-GGE 219
            N N+ S     F I+  +  VV    H    +A E+    G+V+I G G  +G LG GG+
Sbjct: 1285 NKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGG-EHGKLGTGGD 1343

Query: 220  HRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
             +  + F +   A++P    S  ++++   + G+  + ++T  G +++WG  + G++G+G
Sbjct: 1344 LKTPF-FDKPHPAVIP----SLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNG 1398

Query: 280  READVSHPQLIEI 292
            +  D+  P  I +
Sbjct: 1399 KTEDMWLPTKISL 1411


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 184/387 (47%), Gaps = 41/387 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V++WG  I +G L G + +           L P  V +     V  I CG     L+   
Sbjct: 290 VYVWGSNI-HGELPGLQGKT---------CLQPNLVSTFK--QVREIVCGQNCTFLLQTN 337

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC---GEYHTCAVTRSGDLYT 319
           G +F+ GE + GRLG G   D      I  L G  +  +A    G+ HT AV  SG++++
Sbjct: 338 GSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFS 397

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+      P+++   L   H+   SCG  H+AV+T  G +FTFG G 
Sbjct: 398 WGDGDY--GKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQ 454

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LG G +     P+ + +L+    ++++CG  HT A+             + +  KL+
Sbjct: 455 YGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLAL-------------ANNGKKLY 501

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC--QVACGHDLSVALTTSGHVYTMGSAA 497
            WGDG+ G+LG G    R  P  V      N+C  ++ACG   S+ L T+G++YT G   
Sbjct: 502 AWGDGEFGKLGLGSTSVRSIPNLVDSY--RNVCLKKIACGSKFSIVLATNGYLYTFGHKD 559

Query: 498 YGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           +  LG+   D L   +P  V   +    ++ +A G  ++ AL ++  ++ WG    GQLG
Sbjct: 560 F--LGIAETDLLDNTIPQIVSSLMPHPIID-IAVGCNYILALDNSGNIWGWGTNEEGQLG 616

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G  +    P LV       + R+  G
Sbjct: 617 IGTTNPHYLPQLVCTFSGTNITRLSAG 643



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 27/337 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLP-KAVESTMALDVHNIACGARHAVLV 259
           G VF  GEG           R+G   S    +L+P   ++    + +     G  H + V
Sbjct: 338 GSVFACGEGTYG--------RLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAV 389

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              GE+FSWG+   G+LGHG       P+ I  L   +V   +CG  H+  +T+ G ++T
Sbjct: 390 ADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFT 449

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG-HLFTFGDG 378
           +G G Y  G+LG G       P+ +  +L   H+S I+CG  HT  + + G  L+ +GDG
Sbjct: 450 FGQGQY--GILGDGGNSPQKTPQLIL-SLKNEHISQIACGKDHTLALANNGKKLYAWGDG 506

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     SIP  V++ R +   +++CG     ++V+AT+            G L
Sbjct: 507 EFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACG--SKFSIVLATN------------GYL 552

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +T+G  D   +   D      P+ V+ L+   I  +A G +  +AL  SG+++  G+   
Sbjct: 553 YTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEE 612

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           GQLG+   +     ++    + + +  ++ G  H AA
Sbjct: 613 GQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAA 649



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 31/291 (10%)

Query: 317 LYTWGDGTYNS--GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           +Y WG   +    GL G     +C  P  VS       +  I CG   T ++ + G +F 
Sbjct: 290 VYVWGSNIHGELPGLQGK----TCLQPNLVS---TFKQVREIVCGQNCTFLLQTNGSVFA 342

Query: 375 FGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            G+G++G LG G  D   + +P  +  L+G    +++  +      +   DS        
Sbjct: 343 CGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLATSLGGDGHTLAVADS-------- 392

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
              G++F+WGDGD G+LGHG+ E +  P+ +  L  E++ Q +CG   S  LT  G V+T
Sbjct: 393 ---GEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFT 449

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIA---ESFVEEVACGAYHVAALTST-SKVYTWGKG 548
            G   YG LG     G  P +    I       + ++ACG  H  AL +   K+Y WG G
Sbjct: 450 FGQGQYGILG---DGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDG 506

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
             G+LG G    R+ P LVD  ++  +K++ CG  F+ ++  + ++ +  H
Sbjct: 507 EFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGH 557



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 130/308 (42%), Gaps = 74/308 (24%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L++ +    H  A  D    G+VF WG+G   G LG G         RQ     PK +
Sbjct: 374 IQLATSLGGDGHTLAVADS---GEVFSWGDG-DYGKLGHGNSE------RQRK---PKQI 420

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +  A  V   +CG +H+ ++TK G++F++G+   G LG G  +    PQLI  L   ++
Sbjct: 421 IALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHI 480

Query: 299 ELVACGEYHTCAVTRSGD-LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             +ACG+ HT A+  +G  LY WGDG +  G LG GS     IP  V  +   + L  I+
Sbjct: 481 SQIACGKDHTLALANNGKKLYAWGDGEF--GKLGLGSTSVRSIPNLVD-SYRNVCLKKIA 537

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR---------------- 401
           CG   + V+ + G+L+TFG   F  +   D +  +IP+ V +L                 
Sbjct: 538 CGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILA 597

Query: 402 ------------------------------------GLRTTRVSCGVWHTAAVVVATDSS 425
                                               G   TR+S G  H AA      S+
Sbjct: 598 LDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAAW-----SN 652

Query: 426 SSSPSGST 433
           S SPS +T
Sbjct: 653 SQSPSSNT 660


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + S G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ +YGQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 377 LCSKYENYSPAVDFRTMNQAH 397



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 161/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHVREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A+D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LASD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSYGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALASDGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS+G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+Y  G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGSY--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 55/354 (15%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG--------GRLGHGREADVSH 286
           P++V S    DV ++A GARH+V VT  GE++++G+ SG         RL   REA +  
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRL---REAVIDP 255

Query: 287 PQLIEILSGV-NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV--------- 336
           P++    + +  V  VACG+ H  AVT SG L +WG+  +  G LG G            
Sbjct: 256 PEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEF--GQLGQGPPRDSSSKGDAK 313

Query: 337 --------SCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD 387
                   +  +PR V SG+   +  + ++CG  HT  +T+ G +F+FG G+FGALGHGD
Sbjct: 314 SLIRRRADASMMPRLVGSGH---VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGD 370

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
            ++  +PR V+ L G+   +++ G  H+A++              ++ G+++TWG G  G
Sbjct: 371 RLNCDVPRLVDALWGVGVAQIAAGDNHSASL--------------SASGRVYTWGRGKYG 416

Query: 448 RLGHGDKEPRLFPECVAPLIDENI-C-QVACG--HDLSVALTTSGHVYTMGSAAYGQLGV 503
            LGH D + R  P  V  L D  + C Q+ACG  H L++A   SG +   G  + G  G 
Sbjct: 417 ALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGT 476

Query: 504 -PVADGLVPTRVD-GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              AD L PT +D   + +  V +++ G+ H  A+T    VYTWG    GQLGH
Sbjct: 477 GATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 191/374 (51%), Gaps = 56/374 (14%)

Query: 166 NSNDRSSAAETFRI--SLSSV----VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGG 218
            S D S AAE +    S+SS+    V+  + G+ H     S G+V+ +G+         G
Sbjct: 185 TSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDC-------SG 237

Query: 219 EHRVGYSFSRQTDALL--PKAVESTMALD-VHNIACGARHAVLVTKQGEIFSWGEESGGR 275
           E +   + +R  +A++  P+   +T A+  V  +ACG RH   VT  G + SWG E  G+
Sbjct: 238 EGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQ 297

Query: 276 LGHG----------------READVSH-PQLIEILSG-VNVELVACGEYHTCAVTRSGDL 317
           LG G                R AD S  P+L+   SG V    VACG  HT A+T +G +
Sbjct: 298 LGQGPPRDSSSKGDAKSLIRRRADASMMPRLVG--SGHVKFTSVACGAGHTLALTANGRV 355

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           +++G G +  G LGHG +++C +PR V   L G+ ++ I+ G  H+A ++++G ++T+G 
Sbjct: 356 FSFGRGAF--GALGHGDRLNCDVPRLVDA-LWGVGVAQIAAGDNHSASLSASGRVYTWGR 412

Query: 378 GSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G +GALGH D  + S P  V+ L   G+R  +++CG  HT A+           +G  S 
Sbjct: 413 GKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAI-----------AGGGS- 460

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECV--APLIDENICQVACGHDLSVALTTSGHVYTM 493
           G L  WG G  G  G G     L P  +  A L DE + Q++ G   SVA+T  G VYT 
Sbjct: 461 GVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTW 520

Query: 494 GSAAYGQLGVPVAD 507
           G+   GQLG  + D
Sbjct: 521 GARTQGQLGHELGD 534



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 45/337 (13%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI--PRKV 344
           P+ +  L G +V  VA G  H+ AVT +G++Y +GD +     L   +++   +  P +V
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 345 SGNLDGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS----------- 392
           +   + +  ++ ++CG  H A VT++G L ++G+  FG LG G    +S           
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRR 318

Query: 393 ------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
                 +PR V +   ++ T V+CG  HT A+              T+ G++F++G G  
Sbjct: 319 RADASMMPRLVGSGH-VKFTSVACGAGHTLAL--------------TANGRVFSFGRGAF 363

Query: 447 GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           G LGHGD+     P  V  L    + Q+A G + S +L+ SG VYT G   YG LG    
Sbjct: 364 GALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDV 423

Query: 507 DGLV-PTRVDG-EIAESFVEEVACGAYHVAALTS--TSKVYTWGKGANGQLGHGDKDNRN 562
           D    PT V   + A    E++ACG  H  A+    +  +  WG+G++G  G G   +  
Sbjct: 424 DNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVL 483

Query: 563 SPTLVD--FLKDKQVKRVVCGLNFTAII----CLHKW 593
           +PT++D   L D++V ++  G   +  +    C++ W
Sbjct: 484 TPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTW 520


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 206/422 (48%), Gaps = 49/422 (11%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +  WG   A G LG G H +  + S       P A   ++A  V  +ACG +H + + + 
Sbjct: 1   MLCWGHS-AFGQLGNG-HSLKNAVSE------PCACTFSLATCVKEVACGGKHTLFLMED 52

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G+++S G    G+LGH  E   +HP  +  L+  +++ +ACG+ H+ A++  G+LY+WG 
Sbjct: 53  GQVYSCGWNGEGQLGHSHEG--THPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA 110

Query: 323 GTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           G  N G LGH + +    IPR +   L    +  +SCG  H   +   G LFT+G  + G
Sbjct: 111 G--NDGQLGHATVEHYSRIPRIIK-KLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHG 167

Query: 382 ALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG G+  IS S P++V++L G+   +V+ G  H+ A+ ++              G +F 
Sbjct: 168 QLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS--------------GAVFG 213

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG  D++ +  P  V PL    +  ++CG + +  LT +G ++T G+   GQ
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQ 273

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKD 559
           LG       +  R   E+  S V ++ACG  H  A   S+  +Y +G G  GQLG G ++
Sbjct: 274 LGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHEN 333

Query: 560 NRNSPTLV---------------DFLKDKQVKRVVCGLNFTAIICLHKWVSSV---DHSV 601
           N   PT+V               D      VK++  G N   ++C  KW SS    D  +
Sbjct: 334 NVKCPTVVKGKWASCSGQIPMHADCAAYNIVKQIFSGGNKAFVLCT-KWESSERADDFRL 392

Query: 602 CS 603
           CS
Sbjct: 393 CS 394



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 28/256 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G  +G LG   H     +SR     +P+ ++      +  ++CG  H + + 
Sbjct: 103 GNLYSWGAG-NDGQLG---HATVEHYSR-----IPRIIKKLSQQKIQQMSCGDDHCLALG 153

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             G++F+WG+ + G+LG G      S PQ ++ L G+ +  V  G  H+ A++ SG ++ 
Sbjct: 154 DDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFG 213

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG  +  +G LG   +     P  V   L    + YISCG  HTA++T AG LFTFG G 
Sbjct: 214 WGKNS--AGQLGLNDEQVKETPCHVK-PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGG 270

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH D +   I PR V  L G   ++++CG  HT A V              S G L
Sbjct: 271 SGQLGH-DSLHNEINPRRVLELMGSEVSQIACGRKHTLAFV-------------PSSGTL 316

Query: 439 FTWGDGDKGRLGHGDK 454
           + +G GD G+LG G +
Sbjct: 317 YAFGCGDLGQLGTGHE 332


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 167/330 (50%), Gaps = 30/330 (9%)

Query: 269 GEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN 326
           G  S GRLGHG E     P L++ L   G+  + V CG +H+  ++  G +YT G G   
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGY-- 129

Query: 327 SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
            G LGH ++ +      V   L  + ++ +     H+ VVTS G +++FG    G LGHG
Sbjct: 130 KGFLGHKNQNNIRSFLLVDA-LASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
           D     +P  +E LRG +  + +C   H A +              T  G++F WG G  
Sbjct: 189 DDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVL--------------TDAGQVFMWGSGTD 234

Query: 447 GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           G+LG GD E    P  V  L  + I  + CG+D + A+   GH++T G    G+LG    
Sbjct: 235 GKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDE 294

Query: 507 DG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
           +   VP+ V   +AE  +  +ACGA H+AA++  + +YTWGK A GQLGHGD+ +R+ PT
Sbjct: 295 ENRTVPSLVT-ALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPT 353

Query: 566 LV---------DFLKDKQVKRVVCGLNFTA 586
           +V         D     +V +V CG N TA
Sbjct: 354 VVATLLLAPSEDAPPRGRVAKVSCGANHTA 383



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 149/318 (46%), Gaps = 30/318 (9%)

Query: 235 PKAVES--TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  V+S     +   ++ CG  H+++++ +G++++ G    G LGH  + ++    L++ 
Sbjct: 90  PTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKGFLGHKNQNNIRSFLLVDA 149

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+ + V  V     H+  VT  G +Y++G   +  G LGHG      +P  + G L G  
Sbjct: 150 LASLKVTQVCAARNHSLVVTSDGQVYSFGFPKH--GRLGHGDDAYRRLPTMIEG-LRGKK 206

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +   +C   H AV+T AG +F +G G+ G LG GD+ S   P  V  L G     + CG 
Sbjct: 207 VVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRALEGKGIKSIQCGY 266

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
              AA+ V               G LFTWG G  GRLGHGD+E R  P  V  L +  I 
Sbjct: 267 DFAAAINVE--------------GHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIR 312

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLG----------VPVADGLVPTRVDGEIAESF 522
            +ACG     A++    +YT G  A GQLG            VA  L+    D       
Sbjct: 313 AIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAP-PRGR 371

Query: 523 VEEVACGAYHVAALTSTS 540
           V +V+CGA H A+L S S
Sbjct: 372 VAKVSCGANHTASLVSAS 389



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 140/300 (46%), Gaps = 36/300 (12%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
             S G V+  G G   GFLG        SF      LL   V++  +L V  +     H+
Sbjct: 116 ISSKGQVYTCGRGY-KGFLGHKNQNNIRSF------LL---VDALASLKVTQVCAARNHS 165

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           ++VT  G+++S+G    GRLGHG +A    P +IE L G  V    C   H   +T +G 
Sbjct: 166 LVVTSDGQVYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQ 225

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG GT   G LG G   S + P  V   L+G  +  I CG    A +   GHLFT+G
Sbjct: 226 VFMWGSGT--DGKLGQGDNESHFAPVLVRA-LEGKGIKSIQCGYDFAAAINVEGHLFTWG 282

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            G  G LGHGD  + ++P  V  L  +    ++CG  H AA+              +   
Sbjct: 283 HGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAI--------------SDMN 328

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLI---------DENICQVACGHDLSVALTTS 487
            L+TWG   +G+LGHGD+  R  P  VA L+            + +V+CG + + +L ++
Sbjct: 329 VLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVSA 388



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 18/216 (8%)

Query: 376 GDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           G GS G LGHGD      P  V++L  +G++   V CG +H+  +              +
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVI--------------S 117

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S G+++T G G KG LGH ++        V  L    + QV    + S+ +T+ G VY+ 
Sbjct: 118 SKGQVYTCGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSF 177

Query: 494 GSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G   +G+LG    A   +PT ++G   +  V+    GA H A LT   +V+ WG G +G+
Sbjct: 178 GFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGA-HNAVLTDAGQVFMWGSGTDGK 236

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LG GD ++  +P LV  L+ K +K + CG +F A I
Sbjct: 237 LGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAI 272



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 154/340 (45%), Gaps = 30/340 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIE--ILSGVNVELVACGEYHTCAVTRSGD---LYT 319
           +++WG++S      GREA   HP  +   +L  V  E  A     T A    GD   + T
Sbjct: 13  LYTWGDQSL----IGREASEDHPADLPCPVLLHVGAEPSASTSSRTGAQI-PGDGAAIST 67

Query: 320 WGDGTYNS-GLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
              G   S G LGHG +     P  V S +  GI    + CG +H+ V++S G ++T G 
Sbjct: 68  ISLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGR 127

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G  G LGH +  +      V+ L  L+ T+V     H+  V              TS G+
Sbjct: 128 GYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVV--------------TSDGQ 173

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           ++++G    GRLGHGD   R  P  +  L  + + Q  C    +  LT +G V+  GS  
Sbjct: 174 VYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGT 233

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G+LG    +      +   +    ++ + CG    AA+     ++TWG G  G+LGHGD
Sbjct: 234 DGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGD 293

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
           ++NR  P+LV  L +  ++ + CG    A I     L+ W
Sbjct: 294 EENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTW 333



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 20/194 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VV ++  G+ +      G VF+WG G  +G LG G++   ++         P  V +   
Sbjct: 207 VVQTTCFGAHNAVLTDAGQVFMWGSG-TDGKLGQGDNESHFA---------PVLVRALEG 256

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             + +I CG   A  +  +G +F+WG   GGRLGHG E + + P L+  L+ V +  +AC
Sbjct: 257 KGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIAC 316

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI--------HLSY 355
           G  H  A++    LYTWG      G LGHG +     P  V+  L            ++ 
Sbjct: 317 GAGHMAAISDMNVLYTWGKNA--EGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAK 374

Query: 356 ISCGLWHTAVVTSA 369
           +SCG  HTA + SA
Sbjct: 375 VSCGANHTASLVSA 388


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT--DGQLGLPGTEECVRVPRNIR-SLSE 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++    +F++G   +G LG G ++   + P+ +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  + ++              G +F WG    G+LG  D   R  P  +  L  +
Sbjct: 197 AGGAHSFVLTLS--------------GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ CG
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 148/322 (45%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P  V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGHEKARKR--PEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR + +L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + + +  P+ +  L+     Q+A G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VPT +    ++  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDDNDRYVPTLLKSLRSQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEINPRKVFELMGSVVTQITCG 302



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK    L+   +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK-RVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    +   P  V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +++ WG    G+LG  G +E    P  +  L +  I QVACG+  S+AL+    V++ G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +   +   F + +A G  H   LT +  ++ WG+   GQL
Sbjct: 164 NKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D ++R  PTL+  L+ ++V  + CG + TA +
Sbjct: 223 GLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAAL 257



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 101/186 (54%), Gaps = 13/186 (6%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +GY + +QT    P+ ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGYEYKKQTS---PQMIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   + D   P L++ L    V  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHG 386
           G LG G
Sbjct: 325 GQLGTG 330



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    +   D  +P  ++S  +  V +I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  + CG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG G+  +   P  V G+
Sbjct: 325 GQLGTGTTSNRKSPFTVKGS 344


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 178/351 (50%), Gaps = 27/351 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H+ +VT+ G ++ +G    G+LG G    ++ P  ++ L    V  VACG  HT
Sbjct: 43  MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHT 102

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              + SG L+++  G    G LGH  K +  +P+++   +  + +  I+CG +H+ +++ 
Sbjct: 103 IVYSESGKLFSF--GCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSE 159

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G ++ +G+ + G LG G+ +  S+P++++  +      VSCG +HTA V          
Sbjct: 160 DGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EVVSVSCGYYHTALV---------- 207

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVA-PLIDENICQVACGHDLSVALT 485
               T  G L+T+G+ + G+LG    +      P+ VA P  ++    V+CG   +VA+T
Sbjct: 208 ----TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAIT 263

Query: 486 TSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
             GH Y  G  + GQL  G  + +   P ++     +  +  V+CG  H A +T + KV+
Sbjct: 264 KQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCI-SVSCGESHTAVVTESGKVF 322

Query: 544 TWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           T+G G +G+LG G+    NS  P  +       V  V CG   T ++ +HK
Sbjct: 323 TFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHK 373



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 23/272 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+      V  +ACG  H ++ ++ G++FS+G    G+LGH  + +   P+ IE + 
Sbjct: 81  PSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIP 140

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            + ++ +ACG YH+  ++  GD+Y WG+   N G LG G +V   +P+K+    + +   
Sbjct: 141 QMEIKQIACGTYHSIILSEDGDVYVWGNN--NEGQLGLGEEVENSLPKKLKFKKEVVS-- 196

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVET-LRGLRTTRVSCG 411
            +SCG +HTA+VT  G L+TFG+   G LG       +T++P+ V           VSCG
Sbjct: 197 -VSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCG 255

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDEN 470
             HT A+              T  G  + WGDG +G+LGHG K   +  P+ +  L  + 
Sbjct: 256 ARHTVAI--------------TKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQK 301

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
              V+CG   +  +T SG V+T G   +G+LG
Sbjct: 302 CISVSCGESHTAVVTESGKVFTFGDGRHGKLG 333



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 21/261 (8%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + + LLPK +ES   +++  IACG  H++++++ G+++ WG  + G+LG G E + S P+
Sbjct: 127 KENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPK 186

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            ++      V  V+CG YHT  VTR G LYT+G+       L      +  +P+ V+   
Sbjct: 187 KLKFKK--EVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPA 244

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTR 407
           D      +SCG  HT  +T  GH + +GDGS G LGHG   +  + P++++ L G +   
Sbjct: 245 DNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCIS 304

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAP 465
           VSCG  HTA V              T  GK+FT+GDG  G+LG G+        P  ++ 
Sbjct: 305 VSCGESHTAVV--------------TESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSR 350

Query: 466 LIDENICQVACG--HDLSVAL 484
               N+  V+CG  H L +A+
Sbjct: 351 FNYFNVVYVSCGGCHTLVLAV 371



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 19/168 (11%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVH-NIACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
           ++G S S+ ++  +P++V      D + +++CGARH V +TKQG  ++WG+ S G+LGHG
Sbjct: 223 KLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHG 282

Query: 280 REA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
            +  +V+ P+ I+ LSG     V+CGE HT  VT SG ++T+GDG +  G LG G     
Sbjct: 283 TKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRH--GKLGQGED--- 337

Query: 339 WIPRKVSGNLDGIHLS--------YISCGLWHTAVVTSAGHLFTFGDG 378
                 S + D ++LS        Y+SCG  HT V+    +   F DG
Sbjct: 338 ----SFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDG 381



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 66/123 (53%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           + ++ + ++ACG + S  +T SG +Y  GS  +GQLG+     L        +    V +
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRK 94

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           VACG  H    + + K++++G   +GQLGH DK+N   P  ++ +   ++K++ CG   +
Sbjct: 95  VACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHS 154

Query: 586 AII 588
            I+
Sbjct: 155 IIL 157


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 22/336 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+     +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT  +   G +Y WG      G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAA--DGQLGLPGTEEYTRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           + +  ++CG +H+  ++    +F++G    G LG G D    + P+ +++L G+   +++
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+ A+              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFAL--------------TLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  ++CG D + ALT  G V+T G+  YGQLG       +  R   E+  + V ++ACG
Sbjct: 243 KIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSP 564
             H +A   ST ++Y++G G NGQLG G   NR SP
Sbjct: 303 RQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+         V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G    T +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     Q+A G   S ALT SG V+  G   +GQ
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  ++CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V ++ CG   T+
Sbjct: 281 HEINPRKVFELMGNIVTQIACGRQHTS 307



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 31/280 (11%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG   A+G LG  G E      ++R     +P+ ++S 
Sbjct: 86  IVAVSCGEAHTLTLNDKGQVYAWGFA-ADGQLGLPGTE-----EYTR-----VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+FSWG+   G+LG G +    + PQLI+ L G+    
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  H+ A+T SG ++ WG   +  G LG   +   ++P  +  +L    + YISCG 
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYISCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP 311

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           +T             G+++++G G  G+LG G    R  P
Sbjct: 312 ST-------------GRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 21/272 (7%)

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+ ++    LG   +     PR+ +  L+   +  + CGL HT  V   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKT-VRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH    S   P +V  L       VSCG  HT  +                 G+++
Sbjct: 63  LGQLGHEK--SRKRPEQVGALDAQNIVAVSCGEAHTLTL--------------NDKGQVY 106

Query: 440 TWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+    V++ G   +
Sbjct: 107 AWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 499 GQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           GQLG+   +     P  +   +   F  ++A G  H  ALT +  V+ WG+   GQLG  
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPF-GQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 22/336 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+     +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT  +   G +Y WG      G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAA--DGQLGLPGTEEYTRVPRNIK-SLSD 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           + +  ++CG +H+  ++    +F++G    G LG G D    + P+ +++L G+   +++
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+ A+              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 197 AGGAHSFAL--------------TLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  ++CG D + ALT  G V+T G+  YGQLG       +  R   E+  + V ++ACG
Sbjct: 243 KIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACG 302

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSP 564
             H +A   ST ++Y++G G NGQLG G   NR SP
Sbjct: 303 RQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 25/327 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+         V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P +V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G    T +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G D + +  P+ +  L+     Q+A G   S ALT SG V+  G   +GQ
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VP  +    ++  V  ++CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +  +P  V  L    V ++ CG   T+
Sbjct: 281 HEINPRKVFELMGNIVTQIACGRQHTS 307



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 31/280 (11%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVEST 241
           + + S G AH    +  G V+ WG   A+G LG  G E      ++R     +P+ ++S 
Sbjct: 86  IVAVSCGEAHTLTLNDKGQVYAWGFA-ADGQLGLPGTE-----EYTR-----VPRNIKSL 134

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVEL 300
             + +  +ACG  H++ ++K  E+FSWG+   G+LG G +    + PQLI+ L G+    
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQ 194

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G  H+ A+T SG ++ WG   +  G LG   +   ++P  +  +L    + YISCG 
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQKIVYISCGE 251

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT+A V 
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP 311

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           +T             G+++++G G  G+LG G    R  P
Sbjct: 312 ST-------------GRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 21/272 (7%)

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+ ++    LG   +     PR+ +  L+   +  + CGL HT  V   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKT-VRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH    S   P +V  L       VSCG  HT  +                 G+++
Sbjct: 63  LGQLGHEK--SRKRPEQVGALDAQNIVAVSCGEAHTLTL--------------NDKGQVY 106

Query: 440 TWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG  G +E    P  +  L D  I QVACG+  S+AL+    V++ G   +
Sbjct: 107 AWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 499 GQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           GQLG+   +     P  +   +   F  ++A G  H  ALT +  V+ WG+   GQLG  
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPF-GQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D+++R  P L+  L+ +++  + CG + TA +
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 187/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   V D + P RV  E+  S V ++ACG  H  AL  +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A+V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 182/369 (49%), Gaps = 26/369 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG G  NG LG  + + G     +T    P+ V       V  +ACG +H +++   
Sbjct: 47  LYSWGLG-PNGELGLTQGKDG--VDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLAN 103

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G ++S G    G+LG  R   +   + +  LS   +  VACGE H+ A++ +G +++WG 
Sbjct: 104 GSVYSCGANDFGQLGQDRS--MRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG- 160

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
               +G LG G++    +  KV   L  +H+  I+CG  H   + + G LF++G  + G 
Sbjct: 161 -CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQ 219

Query: 383 LGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           LG G   + +  +PR V  L G+    V+CG  H+               G T  G +F 
Sbjct: 220 LGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV--------------GLTPSGTVFV 265

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG  D+  RL P  + PL  + I  V CG + + ALT  G V+T G+  YGQ
Sbjct: 266 WGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQ 325

Query: 501 LGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQLGHGDK 558
           LG  V  +  VP RV  E+  + + +++CG  H  A    S ++Y +G G +GQLG+G  
Sbjct: 326 LGHGVKVNEAVPRRV-VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384

Query: 559 DNRNSPTLV 567
           ++   P  V
Sbjct: 385 ESSALPVTV 393



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 144/296 (48%), Gaps = 35/296 (11%)

Query: 181 LSSVVSSSSH-------GSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           L  V + S+H       G AH       G VF WG    NG LG G        + +   
Sbjct: 126 LEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN-RNGQLGCG--------TEEESR 176

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLI 290
           L PK ++    L +  IACGA H + +   GE+FSWG  + G+LG GR++  +   P+ +
Sbjct: 177 LRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRV 236

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             L GV + LVACG  H+  +T SG ++ WG  +   G LG   +     P  V   L  
Sbjct: 237 SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS--CGQLGLSDQRDRLHP-TVLKPLRS 293

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             + ++ CG  HTA +T+ G +FTFG G++G LGHG  ++ ++PR V  L G   +++SC
Sbjct: 294 QRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSC 353

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           G  HT A              +   G+L+ +G G  G+LG+G  E    P  V  L
Sbjct: 354 GRCHTVAY-------------APQSGRLYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 152/330 (46%), Gaps = 35/330 (10%)

Query: 265 IFSWGEESGGRLG--HGR-----EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           ++SWG    G LG   G+     E  VS P+ +       V  VACG  HT  +  +G +
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVS--GNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           Y+ G   +  G LG    +     RK+     L    +  ++CG  H+  ++ AG +F++
Sbjct: 107 YSCGANDF--GQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159

Query: 376 GDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G    G LG G    + + P+ ++ L  L   +++CG  H  A+               +
Sbjct: 160 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL--------------AN 205

Query: 435 CGKLFTWGDGDKGRLGHGDKEP--RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            G+LF+WG    G+LG G         P  V+ L+   +  VACG   SV LT SG V+ 
Sbjct: 206 NGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV 265

Query: 493 MGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G  + GQLG+    D L PT V   +    ++ V CG  H AALT+   V+T+G G  G
Sbjct: 266 WGRNSCGQLGLSDQRDRLHPT-VLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           QLGHG K N   P  V  L    + ++ CG
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCG 354



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 116/215 (53%), Gaps = 24/215 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG G A+G LG G    G       +  LP+ V   + + +  +ACGA H+V +T
Sbjct: 207 GELFSWG-GNASGQLGLGRDSTG-------NERLPRRVSHLVGVPLALVACGAMHSVGLT 258

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  S G+LG   + D  HP +++ L    ++ V CGE HT A+T  G ++T+
Sbjct: 259 PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTF 318

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G GTY  G LGHG KV+  +PR+V   L G  +S +SCG  HT A    +G L+ FG G 
Sbjct: 319 GAGTY--GQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGM 375

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            G LG+G   S+++P  V             G+WH
Sbjct: 376 SGQLGNGTLESSALPVTVP------------GLWH 398



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 21/237 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG  HT V+ + G +++ G   FG LG     S     +V  L       V+CG  H+
Sbjct: 90  VACGHKHTLVLLANGSVYSCGANDFGQLGQDR--SMRKLEQVAALSAHEIRAVACGEAHS 147

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQV 474
            A+              +  G++F+WG    G+LG G ++E RL P+ +  L   +I Q+
Sbjct: 148 LAL--------------SDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 193

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAY 531
           ACG    +AL  +G +++ G  A GQLG+      +  +P RV   +       VACGA 
Sbjct: 194 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLAL-VACGAM 252

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H   LT +  V+ WG+ + GQLG  D+ +R  PT++  L+ +++K V CG N TA +
Sbjct: 253 HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 175/364 (48%), Gaps = 27/364 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  I+CG  H  LV K G +F +G+   G+LG G    V+ P  ++ L       VACG+
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLWHTA 364
            HT   T    ++ +G  +   G LG G     W+P+ +S +L+   ++  +S G  H+A
Sbjct: 98  SHTLISTECNKIFAFGCNS--DGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSA 155

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T  G ++ +GD S G  G  +      PR++E    + +  +SCG +HTA +      
Sbjct: 156 FLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINS--ISCGYYHTAFI------ 207

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                    S GK++T+G+ D G+LG  DK P   PE V   +DEN   V CG   ++ L
Sbjct: 208 ---------SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVE--LDENCISVKCGGSHTIIL 256

Query: 485 TTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           T SG  Y  GS   GQLG+     +  +P RV+       +  V CG  H A LT   K+
Sbjct: 257 TESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKL 316

Query: 543 YTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSV 601
           YT G G NG+L + D+  N  +PT ++  K      V CG   T +  L K +   +H  
Sbjct: 317 YTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMV--LAKALKLENHEN 374

Query: 602 CSSC 605
            S C
Sbjct: 375 ASEC 378



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 154/347 (44%), Gaps = 37/347 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF++G+    G LG G  ++            P  ++S       ++ACG  H ++ T
Sbjct: 55  GRVFLFGKNDF-GQLGFGHTKI---------VNKPSCLKSLKPFQSIHVACGKSHTLIST 104

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLI--EILSGVNVELVACGEYHTCAVTRSGDLY 318
           +  +IF++G  S G+LG G   D   PQ+I  ++    N+  ++ G +H+  +T  G +Y
Sbjct: 105 ECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVY 164

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WGD +   G  G  ++     PRK+        ++ ISCG +HTA + S G ++TFG+ 
Sbjct: 165 IWGDNS--DGQCGIKNENYLLNPRKIEFQNP---INSISCGYYHTAFI-SLGKVYTFGED 218

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LG  D +   +P  VE         V CG  HT   ++ T+S           GK 
Sbjct: 219 DNGKLGRSDKLPNDVPEGVELDE--NCISVKCGGSHT---IILTES-----------GKA 262

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI--CQVACGHDLSVALTTSGHVYTMGSA 496
           + +G    G+LG G+ E            DEN+    V CG   S  LT  G +YT G  
Sbjct: 263 YAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDG 322

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFV-EEVACGAYHVAALTSTSKV 542
             G+L        + T    E+ +SF    V+CG  H   L    K+
Sbjct: 323 RNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 20/199 (10%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           +I   + ++S S G  H  F SLG V+ +GE   NG LG  +              LP  
Sbjct: 187 KIEFQNPINSISCGYYHTAFISLGKVYTFGED-DNGKLGRSDK-------------LPND 232

Query: 238 VESTMALDVHNIA--CGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEIL- 293
           V   + LD + I+  CG  H +++T+ G+ +++G    G+LG G  E + S PQ +    
Sbjct: 233 VPEGVELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTD 292

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             VN+  V CGE H+  +T  G LYT GDG  N  L       +   P  +         
Sbjct: 293 ENVNLIYVTCGESHSAFLTDEGKLYTCGDGR-NGKLCNEDESTNICTPTTIEM-FKSFFC 350

Query: 354 SYISCGLWHTAVVTSAGHL 372
           +Y+SCG  HT V+  A  L
Sbjct: 351 TYVSCGGCHTMVLAKALKL 369



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G +FT+G   K R    D     F      + ++ + +++CG + +  +  SG V+  G 
Sbjct: 13  GAVFTFG---KSRFAE-DLSSHFF------VRNDPVKEISCGDEHTALVCKSGRVFLFGK 62

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             +GQLG      +        +       VACG  H    T  +K++ +G  ++GQLG 
Sbjct: 63  NDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGV 122

Query: 556 GDKDNRNSPTLV--DFLKDKQVKRVVCGLNFTAII 588
           GD D+R  P ++  D  K   +  +  G + +A +
Sbjct: 123 GDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFL 157


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 188/404 (46%), Gaps = 54/404 (13%)

Query: 201  GDVFIWGEGIANGF---LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
            G++F WG   +      L  G+H+             P  VES     +  ++ G  H V
Sbjct: 1213 GELFTWGNNTSGQLGHGLAAGKHQST-----------PMRVESLKQTPIMMMSLGGEHTV 1261

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
            ++ +   I+SWG    G+LGHG     + P+ IE  +G  +  +A G +HT  +   GDL
Sbjct: 1262 VIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDL 1321

Query: 318  YTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIH-------LSYISCGLWHTAVVTSA 369
            + +G   +  G LG +  K    IP +V  N   IH       ++ I CG  H+ + TS 
Sbjct: 1322 FAFGSNEH--GQLGLNDLKHHLPIPTRV--NTADIHHAGQPTRVTGIFCGHSHSVLRTSH 1377

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            G +++FG  + G LGHG   S   P+ ++ L+G    R++CG +HT   VV TD  S   
Sbjct: 1378 GDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHT---VVTTDLDS--- 1431

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT---- 485
                    ++ WG G+   LG G  +  L P+ V   +++ + +V CG   +  LT    
Sbjct: 1432 --------VYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMG 1483

Query: 486  ---TSGHVYTMGSAAYGQLGV------PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
               T G+VY  GS+ +G+LG+      P  D   P  +   I  + V ++A GA   A +
Sbjct: 1484 DSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPS-INSANVVDLASGAEFNALI 1542

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
            TS   +Y WG G +GQ+G+G   +   PT V    +K   + + 
Sbjct: 1543 TSNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIV 1586



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 176/373 (47%), Gaps = 48/373 (12%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVNVELVACGEY 306
            ++CG  HA ++T  GE+F+WG  + G+LGHG  A    S P  +E L    + +++ G  
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258

Query: 307  HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
            HT  + RS  +Y+WG+G Y  G LGHG      +P+++     G  +S I+ G WHT V+
Sbjct: 1259 HTVVIDRSFHIYSWGNGKY--GQLGHGVSTPHNLPKRIE-EFAGQKISSIATGYWHTLVL 1315

Query: 367  TSAGHLFTFGDGSFGALGHGD---HISTSIPREVETL------RGLRTTRVSCGVWHTAA 417
             S G LF FG    G LG  D   H+   IP  V T       +  R T + CG  H+ +
Sbjct: 1316 RSGGDLFAFGSNEHGQLGLNDLKHHL--PIPTRVNTADIHHAGQPTRVTGIFCG--HSHS 1371

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            V+             TS G ++++G   KG+LGHG  E   +P+ +  L  +NI ++ CG
Sbjct: 1372 VL------------RTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCG 1419

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
               +V  T    VY  G   +  LG     + LVP  V+  + +  VE V CG YH A L
Sbjct: 1420 PYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKR-VERVVCGLYHTATL 1478

Query: 537  T-------STSKVYTWGKGANGQLGHGDKD-----NRNSPTLVDFLKDKQVKRVVCGLNF 584
            T       +   VY  G   +G+LG G        ++  P ++  +    V  +  G  F
Sbjct: 1479 TQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEF 1538

Query: 585  TAII----CLHKW 593
             A+I     L+ W
Sbjct: 1539 NALITSNGALYMW 1551



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 29/270 (10%)

Query: 246  VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
            V  I CG  H+VL T  G+++S+G  + G+LGHG      +P+LI+ L G N++ + CG 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            YHT   T    +Y WG G +    LG GS  +  +P+ V   ++   +  + CGL+HTA 
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMC--LGTGSNKNELVPKLVELFVNK-RVERVVCGLYHTAT 1477

Query: 366  VT-------SAGHLFTFGDGSFGALG-HGDHISTSI----PREVETLRGLRTTRVSCGVW 413
            +T       + G+++  G    G LG  GD  S S+    P  + ++       ++ G  
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAE 1537

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
              A +              TS G L+ WG G  G++G+G  +    P  V+   ++N  Q
Sbjct: 1538 FNALI--------------TSNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQ 1583

Query: 474  VACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
                   S    +S  + T  +  Y Q G+
Sbjct: 1584 FIVDESGSTITLSSSMLLTEKNNRYTQEGL 1613



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 196  DFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGAR 254
            D ++ G+V+I G    +G LG GG+ R     S   D   P  + S  + +V ++A GA 
Sbjct: 1484 DSNTGGNVYICGSS-EHGKLGIGGDPR-----SPSLDKAYPAIIPSINSANVVDLASGAE 1537

Query: 255  HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
               L+T  G ++ WG  + G++G+G+  D   P  + + S  N       E  +     S
Sbjct: 1538 FNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDESGSTITLSS 1597

Query: 315  GDLYTWGDGTY 325
              L T  +  Y
Sbjct: 1598 SMLLTEKNNRY 1608


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 182/369 (49%), Gaps = 26/369 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG G  NG LG  + + G     +T    P+ V       V  +ACG +H +++   
Sbjct: 53  LYSWGLG-PNGELGLTQGKDG--VDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLAN 109

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G ++S G    G+LG  R   +   + +  LS   +  VACGE H+ A++ +G +++WG 
Sbjct: 110 GSVYSCGANDFGQLGQDRS--MRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG- 166

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
               +G LG G++    +  KV   L  +H+  I+CG  H   + + G LF++G  + G 
Sbjct: 167 -CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQ 225

Query: 383 LGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           LG G   + +  +PR V  L G+    V+CG  H+               G T  G +F 
Sbjct: 226 LGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV--------------GLTPSGTVFV 271

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG  D+  RL P  + PL  + I  V CG + + ALT  G V+T G+  YGQ
Sbjct: 272 WGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQ 331

Query: 501 LGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQLGHGDK 558
           LG  V  +  VP RV  E+  + + +++CG  H  A    S ++Y +G G +GQLG+G  
Sbjct: 332 LGHGVKVNEAVPRRV-VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390

Query: 559 DNRNSPTLV 567
           ++   P  V
Sbjct: 391 ESSALPVTV 399



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 149/316 (47%), Gaps = 41/316 (12%)

Query: 161 NAFPDNSNDRSSAAETFRISLSSVVSSSSH-------GSAHE-DFDSLGDVFIWGEGIAN 212
           N F     DRS         L  V + S+H       G AH       G VF WG    N
Sbjct: 118 NDFGQLGQDRSMR------KLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN-RN 170

Query: 213 GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
           G LG G        + +   L PK ++    L +  IACGA H + +   GE+FSWG  +
Sbjct: 171 GQLGCG--------TEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNA 222

Query: 273 GGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL 330
            G+LG GR++  +   P+ +  L GV + LVACG  H+  +T SG ++ WG  +   G L
Sbjct: 223 SGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS--CGQL 280

Query: 331 GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           G   +     P  V   L    + ++ CG  HTA +T+ G +FTFG G++G LGHG  ++
Sbjct: 281 GLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVN 339

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            ++PR V  L G   +++SCG  HT A              +   G+L+ +G G  G+LG
Sbjct: 340 EAVPRRVVELMGTAISQLSCGRCHTVAY-------------APQSGRLYIFGLGMSGQLG 386

Query: 451 HGDKEPRLFPECVAPL 466
           +G  E    P  V  L
Sbjct: 387 NGTLESSALPVTVPGL 402



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 152/330 (46%), Gaps = 35/330 (10%)

Query: 265 IFSWGEESGGRLG--HGR-----EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           ++SWG    G LG   G+     E  VS P+ +       V  VACG  HT  +  +G +
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVS--GNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           Y+ G   +  G LG    +     RK+     L    +  ++CG  H+  ++ AG +F++
Sbjct: 113 YSCGANDF--GQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165

Query: 376 GDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G    G LG G    + + P+ ++ L  L   +++CG  H  A+               +
Sbjct: 166 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL--------------AN 211

Query: 435 CGKLFTWGDGDKGRLGHGDKEP--RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            G+LF+WG    G+LG G         P  V+ L+   +  VACG   SV LT SG V+ 
Sbjct: 212 NGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFV 271

Query: 493 MGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G  + GQLG+    D L PT V   +    ++ V CG  H AALT+   V+T+G G  G
Sbjct: 272 WGRNSCGQLGLSDQRDRLHPT-VLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           QLGHG K N   P  V  L    + ++ CG
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCG 360



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 116/215 (53%), Gaps = 24/215 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG G A+G LG G    G       +  LP+ V   + + +  +ACGA H+V +T
Sbjct: 213 GELFSWG-GNASGQLGLGRDSTG-------NERLPRRVSHLVGVPLALVACGAMHSVGLT 264

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  S G+LG   + D  HP +++ L    ++ V CGE HT A+T  G ++T+
Sbjct: 265 PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTF 324

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G GTY  G LGHG KV+  +PR+V   L G  +S +SCG  HT A    +G L+ FG G 
Sbjct: 325 GAGTY--GQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGM 381

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            G LG+G   S+++P  V             G+WH
Sbjct: 382 SGQLGNGTLESSALPVTVP------------GLWH 404



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 21/237 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG  HT V+ + G +++ G   FG LG     S     +V  L       V+CG  H+
Sbjct: 96  VACGHKHTLVLLANGSVYSCGANDFGQLGQDR--SMRKLEQVAALSAHEIRAVACGEAHS 153

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQV 474
            A+              +  G++F+WG    G+LG G ++E RL P+ +  L   +I Q+
Sbjct: 154 LAL--------------SDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 199

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAY 531
           ACG    +AL  +G +++ G  A GQLG+      +  +P RV   +       VACGA 
Sbjct: 200 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLAL-VACGAM 258

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H   LT +  V+ WG+ + GQLG  D+ +R  PT++  L+ +++K V CG N TA +
Sbjct: 259 HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 184/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G ++ S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEYPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G KG+LG G
Sbjct: 311 ----------PSSGLIYAFGCGAKGQLGTG 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  +  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEYPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 154/297 (51%), Gaps = 17/297 (5%)

Query: 287 PQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P L+E +  V ++ VA   G  H  A++  G +Y+WG+G  + G LGHG+KVS   P+ +
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG--DDGKLGHGNKVSYDRPKLI 60

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
             +L G+ +  I+CG  H+A +TSAG L+T+G G +G LGHGD      P+ VE L+  +
Sbjct: 61  E-DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              V+CG      + V  D +            +++WGDGD G+LG G  +    P  + 
Sbjct: 120 VIDVACGSGDAQTLCVTDDDN------------VWSWGDGDYGKLGRGGSDGCKVPLKID 167

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE 524
            L    + +V CG   SVALT SG VYT G   Y +LG    D +   R    +    + 
Sbjct: 168 SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKII 227

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            +A G+ H  A +   +V+TWG    GQLG G     + P LV  L+ K++ RV CG
Sbjct: 228 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACG 284



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 21/310 (6%)

Query: 233 LLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           ++P  +ES   + +  +A   G +H + ++ +G ++SWGE   G+LGHG +     P+LI
Sbjct: 1   MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLI 60

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           E L GV +  +ACG +H+ A+T +G LYTWG G Y  G LGHG       P+ V   L  
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY--GRLGHGDSDDQLRPKVVEA-LQD 117

Query: 351 IHLSYISCGL--WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             +  ++CG     T  VT   +++++GDG +G LG G      +P ++++L GL   +V
Sbjct: 118 YKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKV 177

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
            CG   + A+              T  G ++TWG GD  RLGHG  +    P  VA L  
Sbjct: 178 ECGSQFSVAL--------------TRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQG 223

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
           + I  +A G    VA +  G V+T G    GQLG      L   R+   +    +  VAC
Sbjct: 224 KKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVAC 283

Query: 529 GAYHVAALTS 538
           G+ H  A ++
Sbjct: 284 GSAHTLAWST 293



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 29/305 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           V+ SS G       S G V+ WGEG  +G LG G      S+ R      PK +E  + +
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEG-DDGKLGHGNK---VSYDR------PKLIEDLLGV 66

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
           ++ +IACG  H+  +T  G +++WG+   GRLGHG   D   P+++E L    V  VAC 
Sbjct: 67  EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 126

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T  VT   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDGDY--GKLGRGGSDGCKVPLKID-SLAGLGVVKVECGSQF 183

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T +G ++T+G G +  LGHG       PR+V  L+G +   ++ G  H  A     
Sbjct: 184 SVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA----- 238

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     +  G++FTWGD D+G+LG G       P  V  L  + I +VACG   ++
Sbjct: 239 ---------CSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 289

Query: 483 ALTTS 487
           A +T+
Sbjct: 290 AWSTA 294



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 167 SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           S DR    E    + +  +     H +A     S G ++ WG+G   G LG G+      
Sbjct: 53  SYDRPKLIEDLLGVEIVDIACGGHHSAA---ITSAGWLYTWGKG-RYGRLGHGD------ 102

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                D L PK VE+     V ++ACG+  A  + VT    ++SWG+   G+LG G    
Sbjct: 103 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 159

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P  I+ L+G+ V  V CG   + A+TRSG +YTWG G Y+   LGHG+      PRK
Sbjct: 160 CKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHR--LGHGTDDHVRRPRK 217

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V+  L G  +  I+ G  H    +  G +FT+GD   G LG G   +   PR V  L+G 
Sbjct: 218 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGK 276

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           + TRV+CG  HT A   A  + S  P+ +
Sbjct: 277 KITRVACGSAHTLAWSTAKATQSRMPAST 305



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 2/179 (1%)

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
           + H     VA  S        +S G +++WG+GD G+LGHG+K     P+ +  L+   I
Sbjct: 9   IQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEI 68

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
             +ACG   S A+T++G +YT G   YG+LG   +D  +  +V   + +  V +VACG+ 
Sbjct: 69  VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSG 128

Query: 532 HVAAL--TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               L  T    V++WG G  G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 129 DAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 187



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 67/117 (57%)

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           V+ G    +AL++ GHVY+ G    G+LG          ++  ++    + ++ACG +H 
Sbjct: 19  VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           AA+TS   +YTWGKG  G+LGHGD D++  P +V+ L+D +V  V CG      +C+
Sbjct: 79  AAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 135



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 509 LVPTRVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
           ++PT ++  I   F+++VA   G  H  AL+S   VY+WG+G +G+LGHG+K + + P L
Sbjct: 1   MIPTLLE-SIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKL 59

Query: 567 VDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           ++ L   ++  + CG + +A I    W+
Sbjct: 60  IEDLLGVEIVDIACGGHHSAAITSAGWL 87


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 172

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 173 SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 229

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 230 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 287

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 288 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 335

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 336 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 395

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 396 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 455

Query: 588 IC 589
           +C
Sbjct: 456 LC 457



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 80  MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 139

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 140 NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 191

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 192 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 237

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 238 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 356

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 357 SMNDEVNPRRVLELMGSEVTQIACG 381



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 154 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 213

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 214 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 271

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 272 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 331

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 332 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 377

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 378 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 407



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 168 VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 215

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 216 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 275

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ W  G  N+G LG   +     P  V   L    + YISCG  H
Sbjct: 276 AGGAHSFALSLSGAVFGW--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 332

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 333 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 389

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 390 ----------PSSGLIYAFGCGARGQLGTG 409



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 235 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 285

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 346 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 403 RGQLGTGHTCNVKCPSPVK 421



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLF--PECVAPLIDENICQVACGHDLSVALTTS 487
           SG  S   +  WG    G+ G       +   P+    + D ++ +VACG + SV L   
Sbjct: 72  SGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLED 131

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G VYT G    GQLG    +G  P ++ G +A+  +  VACG  H  AL+   ++++WG 
Sbjct: 132 GEVYTCGLNTKGQLGHE-REGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGA 189

Query: 548 GANGQLG-HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G++GQLG    +D+   P L+  L  + + +V CG
Sbjct: 190 GSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 224


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  ++D    +  H
Sbjct: 377 LCSKYENYSPAIDFRTVNQAH 397



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 185/363 (50%), Gaps = 37/363 (10%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  +ACG  H+V + + GE+++ G  + G+LGH  E++ S P+LI  L+G ++  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPELIGALAGQHIVHVACG 92

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           E H+ A++  G +++WG G+   G LG  + + +  +PR +   L+   +  ISCG WH 
Sbjct: 93  ESHSVALSDQGQVFSWGAGS--DGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             + + G  FT+G  S+G LG G    S + P+ V++L G+   +V+ G  H+ A+ ++ 
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS- 208

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                        G +F WG    G+LG  D+  R  P  V  L  + +  ++CG + + 
Sbjct: 209 -------------GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTA 255

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-K 541
            LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG +H  A   +S  
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G G  GQLG G   N   P+ V               D  K   VK +  G + T 
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 163/326 (50%), Gaps = 25/326 (7%)

Query: 265 IFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G G   +  +  PQ+   +   NV+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T   G LGH S+ S     ++ G L G H+ +++CG  H+  ++  G +F++G GS G 
Sbjct: 61  NT--KGQLGHESEGS---KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG      + ++PR ++ L      ++SCG WH  A  +A D            G+ FTW
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA--LAAD------------GQFFTW 161

Query: 442 GDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  + GQ
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221

Query: 501 LGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  V    ++  V  ++CG  H A LT +  V+T+G G+ GQLGH   +
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +  +P  V  L   +V ++ CG + T
Sbjct: 281 DEVNPRRVLELMGSEVSQIACGRHHT 306



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H+V ++ QG++FSWG  S G+LG     D V+ P+LI+ L
Sbjct: 75  PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  ++CG +H  A+   G  +TWG  +Y  G LG G +       +   +LDGI L
Sbjct: 135 NQQTILQISCGNWHCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  S G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G    GQLG
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   N +   G+  +G     Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGQ---NSY---GQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+ S G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  +S I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 190/392 (48%), Gaps = 29/392 (7%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           F   G ++ WG     G LGG E              +P   E+   L    +  G +  
Sbjct: 16  FQGSGTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTL 65

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRS 314
             VT  G++++ G  +GGRLG G    VS P L+E +  V ++ VA   G  H  A++  
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G++Y+WG+     G LGHG++  C  PR +  +L GI +  ++ G  H+A VT+AG L+T
Sbjct: 126 GEVYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYT 182

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G G +G LGH D      P+ VE L+G R   ++CG      + +  D +         
Sbjct: 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT--------- 233

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
              +++WGDGD G+LG G  +    P  +  L    + +V CG   SVALT SG VYT G
Sbjct: 234 ---VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 290

Query: 495 SAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
              Y +LG    D +  P +V G   +  +  +A G+ H    T   +VYTWG    GQL
Sbjct: 291 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQL 349

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           G G  +    P LV  L+ K+V RV CG   T
Sbjct: 350 GDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 381



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 235 PKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           P  +ES   + +  +A   G +H + ++ +GE++SWGE   G+LGHG  +    P++IE 
Sbjct: 96  PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 155

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+ V  VA G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  
Sbjct: 156 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 212

Query: 353 LSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +  I+CG     T  +T    ++++GDG +G LG G      +P ++++L GL   +V C
Sbjct: 213 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 272

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G   + A+              T  G ++TWG GD  RLGHG  +    P  V  L  + 
Sbjct: 273 GSQFSVAL--------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +A G    V  T  G VYT G    GQLG    + +   R+   +    V  VACG+
Sbjct: 319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 378

Query: 531 YHVAALTSTSK 541
            H  A  STSK
Sbjct: 379 AHTLAW-STSK 388



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 127/252 (50%), Gaps = 19/252 (7%)

Query: 169 DRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           DR    E+ R I +  V +  +H +      + GD++ WG+G           R+G+S S
Sbjct: 148 DRPRVIESLRGIEVVDVAAGGAHSAC---VTAAGDLYTWGKGRYG--------RLGHSDS 196

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVS 285
              D L PK VE+     V +IACG+  A  + +T    ++SWG+   G+LG G      
Sbjct: 197 E--DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 254

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  I+ L+G+ V  V CG   + A+T+SG +YTWG G Y+   LGHGS      PR+V 
Sbjct: 255 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQ 312

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L G  +  I+ G  H    T  G ++T+GD   G LG G   +   PR V  L+G + 
Sbjct: 313 G-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 371

Query: 406 TRVSCGVWHTAA 417
            RV+CG  HT A
Sbjct: 372 NRVACGSAHTLA 383



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 314 SGDLYTWGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           SG +Y WG    + G LG   G+KV    P +    L  + L      L+    VT+ G 
Sbjct: 19  SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGK 73

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+  G G+ G LG G   S S P  +E+++            H     VA +S       
Sbjct: 74  LYATGYGAGGRLGIGGTESVSTPTLLESIQ------------HVFIKKVAVNSGGKHCLA 121

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            +S G++++WG+ + G+LGHG++ P   P  +  L    +  VA G   S  +T +G +Y
Sbjct: 122 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 181

Query: 492 TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKG 548
           T G   YG+LG     D L P  V+       V+ +ACG+       LT    V++WG G
Sbjct: 182 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 240

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 241 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 280



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G ++ +G    G LG  +     +P   E L  LR  ++  G     AV          
Sbjct: 19  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV---------- 68

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GHDLSVALTT 486
               T+ GKL+  G G  GRLG G  E    P  +  +    I +VA   G    +AL++
Sbjct: 69  ----TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 124

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            G VY+ G A  G+LG          RV   +    V +VA G  H A +T+   +YTWG
Sbjct: 125 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 184

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           KG  G+LGH D +++  P LV+ L+  +V  + CG      +CL
Sbjct: 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 228


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT--DGQLGLPGTEECIRVPRNIK-SLSE 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++    +F++G   +G LG G ++   + P  +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D   R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ CG
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P  V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGHEKARKR--PEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + + +  P  +  L+     Q+A G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VPT +     +  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEINPRKVFELMGSLVTQITCG 302



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+ ++    LG   +     PRK    L+   +  + CGL HT  V   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH    +   P  V  L       VSCG  HT A+                 G+++
Sbjct: 63  LGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLAL--------------NDKGQVY 106

Query: 440 TWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG  G +E    P  +  L +  I QVACG+  S+AL+    V++ G   Y
Sbjct: 107 AWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 499 GQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           GQLG+         P  +   +   F + +A G  H   LT +  ++ WG+   GQLG  
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D ++R  PTL+  L+ ++V  + CG + TA +
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 13/186 (6%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +GY + +Q     P  ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGYEYKKQNS---PHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   + D   P L++ L    V  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHG 386
           G LG G
Sbjct: 325 GQLGTG 330



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    +   D  +P  ++S     V +I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  + CG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG G+  +   P  V GN
Sbjct: 325 GQLGTGTTSNRKSPFTVKGN 344


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT--DGQLGLPGTEECIRVPRNIK-SLSE 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++    +F++G   +G LG G ++   + P  +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D   R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ CG
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P  V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGHEKARKR--PEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + + +  P  +  L+     Q+A G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VPT +     +  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEINPRKVFELMGSLVTQITCG 302



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+ ++    LG   +     PRK    L+   +  + CGL HT  V   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH    +   P  V  L       VSCG  HT A+                 G+++
Sbjct: 63  LGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLAL--------------NDKGQVY 106

Query: 440 TWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG  G +E    P  +  L +  I QVACG+  S+AL+    V++ G   Y
Sbjct: 107 AWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 499 GQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           GQLG+         P  +   +   F + +A G  H   LT +  ++ WG+   GQLG  
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D ++R  PTL+  L+ ++V  + CG + TA +
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 13/186 (6%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +GY + +Q     P  ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGYEYKKQNS---PHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   + D   P L++ L    V  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHG 386
           G LG G
Sbjct: 325 GQLGTG 330



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    +   D  +P  ++S     V +I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  + CG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG G+  +   P  V GN
Sbjct: 325 GQLGTGTTSNRKSPFTVKGN 344


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 169/336 (50%), Gaps = 22/336 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+  E      V ++ CG +H V +   G +++ G    G+LGH  E     P+ +  L 
Sbjct: 25  PRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKPRKKPEHVVALD 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSGNLDGIHL 353
              +  V+ GE HT A+   G +++WG G+   G LG  +   C  +PR +   L  + +
Sbjct: 83  AQIIVAVSGGESHTLALNDKGQIFSWGLGS--DGQLGLNNFEECVRVPRNIKC-LSDVQI 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGV 412
           + ++CG  H+  ++  G +F++G   FG LG G H  S S P+ +++L+G+   ++S G 
Sbjct: 140 AQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG    G+LG  D   R FP  +  L  + + 
Sbjct: 200 AHSFAITLS--------------GAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVI 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            V+CG D + ALT  G V+T G+  YGQLG    +  +  R   E+  + V +++CG  H
Sbjct: 246 YVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQH 305

Query: 533 VAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             A T +S K+Y++G G NGQLG     NR SP  V
Sbjct: 306 TLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPV 341



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 27/271 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + ++ + S G +H    +  G +F WG G ++G LG            +    +P+ ++ 
Sbjct: 83  AQIIVAVSGGESHTLALNDKGQIFSWGLG-SDGQLGLNNF--------EECVRVPRNIKC 133

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVE 299
              + +  +ACG RH+  ++K G++FSWG+   G+LG G   + +S PQ+I+ L G+   
Sbjct: 134 LSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFA 193

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++ G  H+ A+T SG ++ WG   +  G LG       W P  +  +L    + Y+SCG
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKF--GQLGLNDTNDRWFPALLK-SLRSQRVIYVSCG 250

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HTA +T  G +FTFG G +G LGH        PR+V  L G   T++SCG  HT A  
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAF- 309

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
                       + S GK++++G G  G+LG
Sbjct: 310 ------------TPSSGKMYSFGLGGNGQLG 328



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 148/325 (45%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  E   G  V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGN---LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              + G LGH        PRK   +   LD   +  +S G  HT  +   G +F++G GS
Sbjct: 60  -CNDLGQLGHEK------PRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112

Query: 380 FGALGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG  +      +PR ++ L  ++  +V+CG  H+ A+              +  G++
Sbjct: 113 DGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHAL--------------SKGGQV 158

Query: 439 FTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           F+WG    G+LG G     +  P+ +  L      Q++ G   S A+T SG V+  G   
Sbjct: 159 FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNK 218

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+    D   P  +    ++  +  V+CG  H AALT    V+T+G G  GQLGH 
Sbjct: 219 FGQLGLNDTNDRWFPALLKSLRSQRVIY-VSCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L    V ++ CG
Sbjct: 278 STNHEINPRKVFELMGNIVTQISCG 302



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 25/277 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK      G  +  + CGL HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCE-FFHGKKVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH        P  V  L       VS G  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--PRKKPEHVVALDAQIIVAVSGGESHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG G  G+LG  + E  +  P  +  L D  I QVACG+  S AL+  G V++ G 
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQ 163

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANG 551
             +GQLG+ +    + T    +I +S       +++ G  H  A+T +  V+ WG+   G
Sbjct: 164 NQFGQLGLGMHGSSISTP---QIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           QLG  D ++R  P L+  L+ ++V  V CG + TA +
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAAL 257



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 26/225 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG+    G LG G H  G S S       P+ ++S   +    ++ G  H+  +T
Sbjct: 156 GQVFSWGQN-QFGQLGLGMH--GSSIST------PQIIQSLQGIPFAQLSAGGAHSFAIT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG    G+LG     D   P L++ L    V  V+CGE HT A+T+ G ++T+
Sbjct: 207 LSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT-SAGHLFTFGDGS 379
           G G Y  G LGH S      PRKV   L G  ++ ISCG  HT   T S+G +++FG G 
Sbjct: 267 GAGGY--GQLGHNSTNHEINPRKVF-ELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGG 323

Query: 380 FGALG-------------HGDHISTSIPREVETLRGLRTTRVSCG 411
            G LG              G  ++++ P E E+ +     R+  G
Sbjct: 324 NGQLGTRSTCNRKSPAPVKGPFVASAAPIESESEQCFCIHRIYAG 368



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 189 SHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S G AH    +L G VF WG     G LG          +   D   P  ++S  +  V 
Sbjct: 196 SAGGAHSFAITLSGAVFGWGRN-KFGQLG---------LNDTNDRWFPALLKSLRSQRVI 245

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            ++CG  H   +TK+G +F++G    G+LGH       +P+ +  L G  V  ++CG  H
Sbjct: 246 YVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQH 305

Query: 308 TCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           T A T  SG +Y++G G   +G LG  S  +   P  V G
Sbjct: 306 TLAFTPSSGKMYSFGLG--GNGQLGTRSTCNRKSPAPVKG 343


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   + ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVG 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDG 350
            L   N+  V+CGE HT A+   G +Y WG  T   G LG  G++    +PR +  +L  
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT--DGQLGLPGTEECIRVPRNIK-SLSE 136

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
           I +  ++CG +H+  ++    +F++G   +G LG G ++   + P  +++L G+   +++
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+  +              T  G +F WG    G+LG  D   R  P  +  L  +
Sbjct: 197 AGGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQ 242

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V ++ CG
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCG 302

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P  V G LD  ++  +SCG  HT  +   G ++ +G  + G 
Sbjct: 60  -CNDLGQLGHEKARKR--PEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  G      +PR +++L  ++  +V+CG +H+ A+              +   ++F+W
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL--------------SKGSEVFSW 161

Query: 442 GDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + + +  P  +  L+     Q+A G   S  LT SG ++  G   +GQ
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D  VPT +     +  V  + CG  H AALT    V+T+G G  GQLGH    
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEINPRKVFELMGSLVTQITCG 302



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+ ++    LG   +     PRK    L+   +  + CGL HT  V   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH    +   P  V  L       VSCG  HT A+                 G+++
Sbjct: 63  LGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLAL--------------NDKGQVY 106

Query: 440 TWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+LG  G +E    P  +  L +  I QVACG+  S+AL+    V++ G   Y
Sbjct: 107 AWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 499 GQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           GQLG+         P  +   +   F + +A G  H   LT +  ++ WG+   GQLG  
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D ++R  PTL+  L+ ++V  + CG + TA +
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 13/186 (6%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +GY + +Q     P  ++S + +    IA G  H+ ++T 
Sbjct: 157 EVFSWGQ---NKY---GQLGLGYEYKKQNS---PHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   + D   P L++ L    V  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSTSHEINPRKVF-ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHG 386
           G LG G
Sbjct: 325 GQLGTG 330



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    +   D  +P  ++S     V +I CG  H   +TK+G +F++
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH   +   +P+ +  L G  V  + CG  HT A V  SG +Y++G G   +
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG--GN 324

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG G+  +   P  V GN
Sbjct: 325 GQLGTGTTSNRKSPFTVKGN 344


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 211/446 (47%), Gaps = 45/446 (10%)

Query: 162 AFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR 221
           AF  +    +S     R  +S +V+++ + +   D   +  +  WG      +   G+  
Sbjct: 414 AFQSHCTMLTSHQPRQRAPVSHIVTAAYYLAVFVDVSWIRTMLCWG------YWSLGQ-- 465

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
            G S + Q     P+         V  +ACG  H+V + + GE+++ G  + G+LGH RE
Sbjct: 466 PGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE 525

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWI 340
            +   P+ I  L+  ++  VACGE H+ A++  G L++WG G+   G LG   ++ S  +
Sbjct: 526 GN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAV 581

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVET 399
           PR +   L+   +  +SCG WH   + + G  FT+G  S G LG G    S + P+ V +
Sbjct: 582 PRLIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS 640

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L G+   +V+ G  H+ A+ ++              G +F WG  + G+LG  D++ R  
Sbjct: 641 LEGIPLAQVAAGGAHSFALSLS--------------GAVFGWGMNNAGQLGLSDEKDRES 686

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIA 519
           P  V  L  + +  ++CG + +  LT SG V+T G+ + GQLG    +  V  R   E+ 
Sbjct: 687 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM 746

Query: 520 ESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLV----------- 567
            S V ++ACG  H  A   +S  +Y +G GA GQLG G   N   P+ V           
Sbjct: 747 GSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQL 806

Query: 568 ----DFLKDKQVKRVVCGLNFTAIIC 589
               D  K   VK++  G + T ++C
Sbjct: 807 SARADRCKYHIVKQIFSGGDQTFVLC 832


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 170/329 (51%), Gaps = 31/329 (9%)

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           G+LG G E     P  +E LSG  +  VA G+  T A++  GD+YTWG G Y  G LGH 
Sbjct: 69  GQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEY--GKLGHN 126

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
              +  +PR V   L G ++  +S G  H A +   GHL+ +G  +    G  +H+   I
Sbjct: 127 DDSNENLPRLVEA-LKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEHV--FI 183

Query: 394 PREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
           PR ++  L   +   VSCG  HTAAV              T  G+++TWG+G +G LGHG
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAV--------------TEKGEVWTWGNGYEGELGHG 229

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---- 508
           +K  +  P+ V  L  E +  VACG D ++ +  SG +Y+ G+  YGQLG+  + G    
Sbjct: 230 EKNSQYQPKKVQSLT-EKVVDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFV 287

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
             P  + G    S V  ++ G YHV AL     VYTWG G  GQLGHG+K + +    VD
Sbjct: 288 QTPRSLSG-TGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVD 346

Query: 569 FLKDKQVKRVVCGLNFTAII----CLHKW 593
            L++ ++ +V CG   TA +     L+ W
Sbjct: 347 NLRNFEIVQVACGGGHTAAVTKDGVLYTW 375



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 179/378 (47%), Gaps = 32/378 (8%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           ++G    R  D   P  VE+     +  +A G      ++  G++++WG    G+LGH  
Sbjct: 70  QLGQGHERPADRPFP--VEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHND 127

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
           +++ + P+L+E L G N+  V+ G  H  A+ + G LY WG     +   G G     +I
Sbjct: 128 DSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWG----RAASAGSGGTEHVFI 183

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           PR + G+L+   +  +SCG  HTA VT  G ++T+G+G  G LGHG+  S   P++V++L
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSL 243

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF- 459
              +   V+CG   T  V           SG  SCG        D G+LG G      F 
Sbjct: 244 T-EKVVDVACGRDFTIFVC---------ESGLYSCGA------DDYGQLGLGRSHGERFV 287

Query: 460 --PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDG 516
             P  ++     ++  ++ G     AL   G VYT G    GQLG    AD  +   VD 
Sbjct: 288 QTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVD- 346

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK-----DNRNSPTLVDFLK 571
            +    + +VACG  H AA+T    +YTWG+G +GQLG G +       R SP  V  L 
Sbjct: 347 NLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLP 406

Query: 572 DKQVKRVVCGLNFTAIIC 589
              V  V  G + +A++C
Sbjct: 407 AGAVLYVTLGSDHSAVLC 424



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L TFG    G LG G       P  VE L G R   V+ G   TAA+ +  D        
Sbjct: 60  LTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGD-------- 111

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                 ++TWG G+ G+LGH D      P  V  L  +NI +V+ G +   A+   GH+Y
Sbjct: 112 ------VYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY 165

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             G AA    G       +P  + G++ +  V  V+CG  H AA+T   +V+TWG G  G
Sbjct: 166 CWGRAASAGSG-GTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEG 224

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +LGHG+K+++  P  V  L +K V  V CG +FT  +C
Sbjct: 225 ELGHGEKNSQYQPKKVQSLTEKVVD-VACGRDFTIFVC 261



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 145/303 (47%), Gaps = 29/303 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDV+ WG G   G LG          +  ++  LP+ VE+    ++  ++ G  H   + 
Sbjct: 110 GDVYTWGSG-EYGKLG---------HNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAID 159

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGDLYT 319
           K G ++ WG  +    G G    V  P+LI+  L    V  V+CG  HT AVT  G+++T
Sbjct: 160 KDGHLYCWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWT 217

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG+G    G LGHG K S + P+KV    + +    ++CG   T  V  +G L++ G   
Sbjct: 218 WGNGY--EGELGHGEKNSQYQPKKVQSLTEKV--VDVACGRDFTIFVCESG-LYSCGADD 272

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LG G    +   R V+T R L  T +S         VVA  +           G ++
Sbjct: 273 YGQLGLG---RSHGERFVQTPRSLSGTGLS--------DVVAISAGDYHVCALGRDGLVY 321

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           TWG G +G+LGHG+K      + V  L +  I QVACG   + A+T  G +YT G    G
Sbjct: 322 TWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDG 381

Query: 500 QLG 502
           QLG
Sbjct: 382 QLG 384


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H  A++  G L++WG G+    GL+     V+  +PR +   L+   +  +SCG WH+ 
Sbjct: 94  SHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVA--VPRVIQ-KLNQQTILQVSCGNWHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H   ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHNLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      + ++PR ++ L      +VSCG WH+ A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H + ++ +G++FSWG  S G+LG     D V+ P++I+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H+ A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHSLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHNLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDAVAVPRVIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H++ +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEESVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D+E R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V    A+  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEESVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEEDRESPCHVK-LLRAQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 186/363 (51%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG  H+V + + GE+++ G  S G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   + D + P RV  E+  S V ++ACG  H  A   +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K + VK++  G + T 
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 161/329 (48%), Gaps = 31/329 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G        V+ PQ+   +S  +++ VACG  H+  +   G++YT   
Sbjct: 1   MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTC-- 58

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           G  + G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 59  GVNSKGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGHG
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHG 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++  +P  V  L   +V ++ CG   T
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHT 306



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGHG     + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 26/253 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG G ++G LG          + +    +P+ ++      +  ++CG  H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA G  H+ A++ SG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG    N+G LG   +     P  V   L    + YISCG  HTAV+T +G +FTFG GS
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGHG       PR V  L G   T+++CG  HT A V              S G ++
Sbjct: 271 CGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-------------PSSGLIY 317

Query: 440 TWGDGDKGRLGHG 452
            +G G +G+LG G
Sbjct: 318 AFGCGARGQLGTG 330


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 22/339 (6%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +  +V ++ CG+RH V V   G +++ G    G+LGH +      P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--KKPDQVG 63

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDG 350
            L    +  V+CGE HT A+   G +++WG   +  G +G   ++    +PR +    D 
Sbjct: 64  ALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGLSVAEDYIRVPRNIKSLYD- 120

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVS 409
           I +  ++CG  H+  ++    ++++G   +G LG G  I   S PR +++L G+    ++
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G  H+ A+              T  G +F WG    G+LG  D+  R  P  +  L  +
Sbjct: 181 AGGGHSFAL--------------TMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQ 226

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            I  + CG D + ALT  G V+T G+  YGQLG    +  V  R   E+  S V ++ACG
Sbjct: 227 KIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACG 286

Query: 530 AYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 287 RQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 325



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 27/306 (8%)

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
           E  V  P+  +     NV  V CG  HT  V   G +YT G    + G LGH    S   
Sbjct: 3   EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG--CNDLGQLGHDK--SRKK 58

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREV 397
           P +V G LD   +  +SCG  HT  +   G +F++G  + G +G     D+I   +PR +
Sbjct: 59  PDQV-GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIR--VPRNI 115

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EP 456
           ++L  ++  +V+CG  H+ A+   +D              +++WG    G+LG G + + 
Sbjct: 116 KSLYDIQIVQVACGHHHSLALSKESD--------------IYSWGQNQYGQLGLGSEIKK 161

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVD 515
              P  +  L       +A G   S ALT SG ++  G   +GQLG+    D   P  + 
Sbjct: 162 ESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLK 221

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
              ++  +  + CG  H AALT    V+T+G G  GQLGH   ++  +P  V  L    V
Sbjct: 222 SLRSQKIIH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIV 280

Query: 576 KRVVCG 581
            ++ CG
Sbjct: 281 TQIACG 286



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 20/236 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           + CG  HT  V   G ++T G    G LGH    S   P +V  L       VSCG  HT
Sbjct: 23  VGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--SRKKPDQVGALDAQTIVAVSCGEAHT 80

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQV 474
            A+                 G++F+WG    G++G    E  +  P  +  L D  I QV
Sbjct: 81  LAL--------------NDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQV 126

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYH 532
           ACGH  S+AL+    +Y+ G   YGQLG+   +     P  +       F   +A G  H
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAH-IAAGGGH 185

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             ALT +  ++ WG+   GQLG  D+ +R++P L+  L+ +++  + CG + TA +
Sbjct: 186 SFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAAL 241



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           D++ WG+   N +   G+  +G    +++    P+ ++S   +   +IA G  H+  +T 
Sbjct: 141 DIYSWGQ---NQY---GQLGLGSEIKKESA---PRHIKSLAGIPFAHIAAGGGHSFALTM 191

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D S P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 192 SGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG 251

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 252 AGGY--GQLGHNSTNHEVNPRKVF-ELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 308

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 309 GQLGTG---STSNRKSPFTVKG 327



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 210 IANGFLGGGEHRVG-YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSW 268
           ++    G G ++ G    + +TD   P  ++S  +  + +I CG  H   +TK+G +F++
Sbjct: 191 MSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTF 250

Query: 269 GEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNS 327
           G    G+LGH       +P+ +  L G  V  +ACG  HT A V  SG +Y++G G   +
Sbjct: 251 GAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG--GN 308

Query: 328 GLLGHGSKVSCWIPRKVSGN 347
           G LG GS  +   P  V GN
Sbjct: 309 GQLGTGSTSNRKSPFTVKGN 328



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
           D+E  L P      I++N+  V CG   +V +   G VYT G    GQLG   +    P 
Sbjct: 2   DEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK-KPD 60

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTLVDFLK 571
           +V    A++ V  V+CG  H  AL    +V++WG  A+GQ+G    +D    P  +  L 
Sbjct: 61  QVGALDAQTIV-AVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY 119

Query: 572 DKQVKRVVCG 581
           D Q+ +V CG
Sbjct: 120 DIQIVQVACG 129


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 97

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 98  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 154

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 155 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 212

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 213 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 260

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 261 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 320

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 321 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 380

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 381 LCSKYENYSPAVDFRTMNQAH 401



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 5   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 64

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 65  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 116

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 117 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 162

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 163 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 281

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 282 SMNDEVNPRRVLELMGSEVTQIACG 306



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 79  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 138

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 139 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 196

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 197 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 256

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 257 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 302

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 303 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 332



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 93  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 140

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 141 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 200

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 201 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 257

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 258 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 314

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 315 ----------PSSGLIYAFGCGARGQLGTG 334



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 160 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 210

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 271 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 328 RGQLGTGHTCNVKCPSPVK 346


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 192/414 (46%), Gaps = 49/414 (11%)

Query: 194 HEDFDSLGDVFIWGEGI-ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
           HED    G+  +W  G  + G LG G+     SF R         +++    ++  I  G
Sbjct: 556 HED---EGEREVWSCGQNSYGELGHGDTASRKSFER---------IQALQQKEIIQIGAG 603

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAV 311
             H V++T  G++F+ G    G+ G G  A VSH  ++ ++ SG +      G  HT  V
Sbjct: 604 NEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILV 663

Query: 312 TRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           +  G + T G   YN  G LGHG+  S  +P K+  +L+   +  +SC  +HT +    G
Sbjct: 664 STDGRVATCG---YNYRGQLGHGNTTSESVP-KIIRSLENKIVRLVSCSYYHTVLACEDG 719

Query: 371 HL---FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           +L   +TFG   +G LGH D I   IP+ VE L   +   V+CG +HT  V         
Sbjct: 720 NLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVV--------- 770

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-QVACGHDLSVALTT 486
                T+ GK F +G  D G+LG    E +L P  V   ++   C ++ CG+  ++AL +
Sbjct: 771 -----TASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCS 825

Query: 487 SGHVYTMGSAAYGQLGVPVADG------------LVPTRVDGEIAESFVEEVACGAYHVA 534
             H++  G   YGQLG+  ++                 R+  E+    +  +ACG YH  
Sbjct: 826 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTI 885

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A++    +Y +G+  +GQLG GD   R  P  +D    K+V  V  G   T ++
Sbjct: 886 AVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVL 939



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 138/305 (45%), Gaps = 39/305 (12%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H +LV+  G + + G    G+LGHG     S P++I  L    V LV+C  YHT   
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 312 TRSG---DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              G   +LYT+G   Y  G LGH   +   IP+ V   L    +  ++CG +HT VVT+
Sbjct: 716 CEDGNLQNLYTFGRNDY--GQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTA 772

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           +G  F FG   +G LG     +   P +V   L       + CG +HT A+         
Sbjct: 773 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC-------- 824

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDK----------EPRLFPECVAPLIDE----NICQ 473
                 S   LF +G  D G+LG G            + + F    A LIDE    +I +
Sbjct: 825 ------SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSN--ARLIDELEGKDIVR 876

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +ACG   ++A++ +G +Y  G   +GQLG     + + P  +D  + +  V  VA G YH
Sbjct: 877 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-VALVAAGFYH 935

Query: 533 VAALT 537
              LT
Sbjct: 936 TVVLT 940



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           ++++ G    G LGHGD   R   E +  L  + I Q+  G++ +V LT  G V+T G  
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY----HVAALTSTSKVYTWGKGANGQ 552
             GQ G     G        EI +         AY    H   +++  +V T G    GQ
Sbjct: 623 DNGQCG---QGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQ 679

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           LGHG+  + + P ++  L++K V+ V C    T + C
Sbjct: 680 LGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 716



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           D+  IACG  H + V+  G ++ +G  + G+LG G   +  +P  I+   G  V LVA G
Sbjct: 873 DIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAG 932

Query: 305 EYHTCAVT 312
            YHT  +T
Sbjct: 933 FYHTVVLT 940


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 178/387 (45%), Gaps = 52/387 (13%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH------ 286
           L PK V       +  +ACG  H + +T  G+++S+G+    ++     A  +       
Sbjct: 466 LRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNE 525

Query: 287 ------------PQLIEILS------GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSG 328
                       P L+E L+         + +VACG  H+ A+T +G+LYTWG G    G
Sbjct: 526 STRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSG--EDG 583

Query: 329 LLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH 388
            LGHG      +PRKV   L    +S  SCG  HTAV+T+ G +FTFG G  G LG GD+
Sbjct: 584 RLGHGDMRDRAVPRKVMSLLRESVVS-ASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDN 642

Query: 389 ISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
                P  +    +G   + V CG   TAA+                 G +FTWG   +G
Sbjct: 643 KWRDTPHPIVGFPQGTSISLVVCGWNFTAAL--------------DRQGSVFTWGKTGEG 688

Query: 448 R--LGHGDKEPRLFPECVAPLID---ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           +  LG+ D++ ++ P CV  L D    ++  VACG+  +V LT SG +Y+ G   YGQLG
Sbjct: 689 QCGLGYVDRD-QVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG 747

Query: 503 VPVADGLVPTRV----DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
                  +P RV    D   A   +  V CGA+H  A T    ++ WG  + G  G G  
Sbjct: 748 TGDVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHT 807

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            N++ P  +D    +    V CG  +T
Sbjct: 808 ANKDKPERIDCFSSQTELVVACGHKYT 834



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 180/395 (45%), Gaps = 51/395 (12%)

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD-----------GTYNSGLLGH 332
           V  P+ + + +G  +  VACG  H   +T +GD+Y++GD            T+ S L  +
Sbjct: 465 VLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524

Query: 333 GS----KVSCWIPRKVSGNL---DGIH---LSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            S      S ++   +   L     +H   ++ ++CG  H+  +T AG L+T+G G  G 
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHGD    ++PR+V +L        SCG  HTA +              T+ G +FT+G
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVL--------------TAKGSVFTFG 630

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLID-ENICQVACGHDLSVALTTSGHVYTMGSAAYGQ- 500
            G  GRLG GD + R  P  +       +I  V CG + + AL   G V+T G    GQ 
Sbjct: 631 RGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQC 690

Query: 501 -LGVPVADGLVPTRVDG--EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            LG    D +VP  VD   ++A S V +VACG  H   LT++ ++Y+WG G  GQLG GD
Sbjct: 691 GLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGD 750

Query: 558 KDNRNSPTLVDFLKD-----KQVKRVVCGLNFTAIICLHKWVSSV----DHSVCSSCHNP 608
              +  P  V    D      Q+ RV CG  F +I    + V        +  C   H  
Sbjct: 751 V-YQPLPARVQLPADALCAPDQLARVYCG-AFHSIATTEQRVMFAWGLNSYGACGLGHTA 808

Query: 609 FGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSI 643
              + +R +C++       AC  + ++   +  S+
Sbjct: 809 NKDKPERIDCFSSQTELVVACGHKYTIALEVNASL 843



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 31/321 (9%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           L KA+  T    +  +ACGA+H++ +T  GE+++WG    GRLGHG   D + P+ +  L
Sbjct: 546 LEKALHRTT---IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSL 602

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
              +V   +CG  HT  +T  G ++T+G G   +G LG G       P  + G   G  +
Sbjct: 603 LRESVVSASCGGAHTAVLTAKGSVFTFGRG--RNGRLGLGDNKWRDTPHPIVGFPQGTSI 660

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFG--ALGHGDHISTSIPREVETLR---GLRTTRV 408
           S + CG   TA +   G +FT+G    G   LG+ D     +PR V+ LR   G     V
Sbjct: 661 SLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDR-DQVVPRCVDKLRDVAGSSVVDV 719

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-- 466
           +CG  HT  +              T+ G+L++WG G+ G+LG GD    L      P   
Sbjct: 720 ACGYTHTVVL--------------TASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADA 765

Query: 467 --IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFV 523
               + + +V CG   S+A T    ++  G  +YG  G+   A+   P R+D   +++ +
Sbjct: 766 LCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTEL 825

Query: 524 EEVACGAYHVAALTSTSKVYT 544
             VACG  +  AL   + +YT
Sbjct: 826 -VVACGHKYTIALEVNASLYT 845



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 20/273 (7%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           +  DR+   +   +   SVVS+S  G+      + G VF +G G  NG LG G+++  + 
Sbjct: 589 DMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRG-RNGRLGLGDNK--WR 645

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADV 284
            +       P+    ++      + CG      + +QG +F+WG+   G+ G G  + D 
Sbjct: 646 DTPHPIVGFPQGTSISL------VVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQ 699

Query: 285 SHPQLIEIL---SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
             P+ ++ L   +G +V  VACG  HT  +T SG+LY+WG G Y  G LG G  V   +P
Sbjct: 700 VVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEY--GQLGTGD-VYQPLP 756

Query: 342 RKVSGNLDGI----HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
            +V    D +     L+ + CG +H+   T    +F +G  S+GA G G   +   P  +
Sbjct: 757 ARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERI 816

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +         V+CG  +T A+ V     + SPS
Sbjct: 817 DCFSSQTELVVACGHKYTIALEVNASLYTHSPS 849


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 377 LCSKYENYSPAVDFRTMNQAH 397



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 ICLHKWVSS--VDHSVCSSCH 606
           +C     SS  VD  + +  H
Sbjct: 377 LCSKYENSSPAVDFRIMNQAH 397



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ QG++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---QGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 196/402 (48%), Gaps = 30/402 (7%)

Query: 182 SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           +SVV +  + ++ E    L +VF+WG   +N    G         +  TD  +P+ V S 
Sbjct: 323 TSVVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGA--------TEVTD--IPRLVRSL 372

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
              DV  +  G     ++  +G + + G+ S GRLG G  ++   P+ I I   +     
Sbjct: 373 S--DVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSS 430

Query: 302 ACG-EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           + G + H+ A++ +G++Y+WGDG Y  G LGHG   +   P+ + G   G  +  +S G 
Sbjct: 431 SKGCDGHSLALSDTGEVYSWGDGDY--GKLGHGDVATHKEPKLIQGPFIGKVIELVSAGY 488

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+A VTS G L+T+G+G  G LGHGD     IP  V++L  +    V+CG  HT A   
Sbjct: 489 RHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLAC-- 546

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                  S  G+T    ++++G GD G+LGHG+      P+ +  L    I +VA G   
Sbjct: 547 -------SRDGNT----VWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHF 595

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           SVALT +G V+T G  +    G        P  V+ ++ +  + +++ G  H  ALT   
Sbjct: 596 SVALTCTGEVFTWGQGSNLGCGSSEITLFSPAVVE-DLMQQMIIDISVGDSHCLALTRNC 654

Query: 541 KVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCG 581
            VY WG    GQ G G   +  S P+ V  L+ KQ+ ++  G
Sbjct: 655 AVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQINQISAG 696



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 180/383 (46%), Gaps = 36/383 (9%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            D ++WG G  NG LG  +  VG   +  +    P  +++        I CG     ++T 
Sbjct: 3393 DAYLWGNG-RNGQLG--DTAVGQCINIWS----PIKIQNFKI--AQRIVCGQNCTFVLTS 3443

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            QG + S GE + GRLGHG    + +  +I  L G  +  V+     + H+ A+T +G+++
Sbjct: 3444 QGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVF 3503

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +WGDG +  G LGHG+      P+ +    D + +  ++CG  H+AV++  G ++ FG  
Sbjct: 3504 SWGDGDF--GKLGHGNNERQRKPKLIESLYDVVVIQ-VACGHKHSAVLSQDGEVYVFGSA 3560

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
              G LG G HI+   P ++     L    ++CG  HT  +                 G+ 
Sbjct: 3561 EHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICI-----------------GEN 3603

Query: 439  FTW--GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
              W  G+G+ G+LG G K+    P+ +  L  +NI +  CG+  ++ L+  G +Y+ GS 
Sbjct: 3604 VVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSD 3663

Query: 497  AYGQ-LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
                   V   + L+P ++  E     V +VA G  HV  LT+   V+ WG    G LG 
Sbjct: 3664 NLQDATDVLYTEKLIPEKI-FEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGF 3722

Query: 556  GDKDNRNSPTLVDFLKDKQVKRV 578
            G       P ++  L DK +K++
Sbjct: 3723 GHDLPVQKPMIIQILSDKNIKQI 3745



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 30/281 (10%)

Query: 316  DLYTWGDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
            D Y WG+G   +G LG    G  ++ W P K+           I CG   T V+TS G +
Sbjct: 3393 DAYLWGNG--RNGQLGDTAVGQCINIWSPIKIQNFKIA---QRIVCGQNCTFVLTSQGTV 3447

Query: 373  FTFGDGSFGALGHGDHISTSIPR--EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
             + G+G++G LGHG   S S+P    +  L+G   T+VS  +            S     
Sbjct: 3448 LSCGEGNYGRLGHGH--SDSLPNLTMISALQGFVITQVSTSI-----------GSDGHSL 3494

Query: 431  GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
              T  G++F+WGDGD G+LGHG+ E +  P+ +  L D  + QVACGH  S  L+  G V
Sbjct: 3495 ALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEV 3554

Query: 491  YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF--VEEVACGAYHVAALTSTSKVYTWGK 547
            Y  GSA +G+LG+    +   PT++   + + F  ++ +ACG  H   +   + V+ +G+
Sbjct: 3555 YVFGSAEHGKLGLGGHINKKRPTKI---VHKGFLNIKYIACGQNHTICI-GENVVWAFGE 3610

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G  G+LG G K +   P  +  L  K +K+  CG  FT  +
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFL 3651



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 26/288 (9%)

Query: 255  HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
            H++ +T+ GE+FSWG+   G+LGHG       P+LIE L  V V  VACG  H+  +++ 
Sbjct: 3492 HSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQD 3551

Query: 315  GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
            G++Y +G   +  G LG G  ++   P K+      +++ YI+CG  HT +      ++ 
Sbjct: 3552 GEVYVFGSAEH--GKLGLGGHINKKRPTKIVHK-GFLNIKYIACGQNHT-ICIGENVVWA 3607

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            FG+G  G LG G      +P+E+ TL G    +  CG   T  + ++ D           
Sbjct: 3608 FGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFT--MFLSED----------- 3654

Query: 435  CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
             G+L++ G  +           +L PE +     + +  VA G D  + LT  GHV+  G
Sbjct: 3655 -GELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWG 3713

Query: 495  SAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            +   G LG    +PV   ++       +++  ++++A    H AA T+
Sbjct: 3714 NNCEGILGFGHDLPVQKPMIIQI----LSDKNIKQIATSRTHCAAWTA 3757



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 141/305 (46%), Gaps = 32/305 (10%)

Query: 172  SAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
            SA + F I+ +S+ + S  H  A       G+VF WG+G   G LG G +       RQ 
Sbjct: 3473 SALQGFVITQVSTSIGSDGHSLA---LTETGEVFSWGDG-DFGKLGHGNNE------RQR 3522

Query: 231  DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
                PK +ES   + V  +ACG +H+ ++++ GE++ +G    G+LG G   +   P  I
Sbjct: 3523 K---PKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI 3579

Query: 291  EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
                 +N++ +ACG+ HT  +   G+   W  G    G LG GSK   ++P+++   L+G
Sbjct: 3580 VHKGFLNIKYIACGQNHTICI---GENVVWAFGEGEGGKLGIGSKKDIYVPQEII-TLNG 3635

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             ++    CG   T  ++  G L++ G  +        +    IP ++   +G   T V+ 
Sbjct: 3636 KNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVAT 3695

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G  H   +              T+ G ++ WG+  +G LG G   P   P  +  L D+N
Sbjct: 3696 GPDHVLVL--------------TARGHVWAWGNNCEGILGFGHDLPVQKPMIIQILSDKN 3741

Query: 471  ICQVA 475
            I Q+A
Sbjct: 3742 IKQIA 3746


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 184/373 (49%), Gaps = 37/373 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+A        V  +ACG  H V + + GE+++ G  + G+LGH RE +   P+ I  L+
Sbjct: 25  PQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALA 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHL 353
             ++  VACGE H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +
Sbjct: 83  DQHIIHVACGESHSLALSDQGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTI 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGV 412
             +SCG WH   + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G 
Sbjct: 140 LQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG  + G+LG  D++ R  P  V  L  + + 
Sbjct: 200 AHSFALSLS--------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            ++CG + +  LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H
Sbjct: 246 YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQH 305

Query: 533 VAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVK 576
             A   +S  +Y +G GA GQLG G   N   P+ V               D  K   VK
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVK 365

Query: 577 RVVCGLNFTAIIC 589
           ++  G + T ++C
Sbjct: 366 QIFSGGDQTFVLC 378



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 158/322 (49%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G G      V+ PQ    +S  +V+ VACG  H   +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T   G LGH  + +   P ++ G L   H+ +++CG  H+  ++  G LF++G GS G 
Sbjct: 61  NT--KGQLGHEREGN--QPEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 383 LG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG      S ++PR ++ L      +VSCG WH  A  +ATD            G+ FTW
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LATD------------GQFFTW 161

Query: 442 GDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G    GQ
Sbjct: 162 GKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221

Query: 501 LGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH   +
Sbjct: 222 LGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L   +V ++ CG
Sbjct: 281 DEVNPRRVLELMGSEVTQIACG 302



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---QGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  QT    P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 178/387 (45%), Gaps = 81/387 (20%)

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVS--------HPQLIEILSGVNVELVACGEYHTCA 310
           ++ Q  +F+WG  + G+LGHG               P+++E   G N+  +  G  H+ A
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCW--IPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           + + G LYTWG   Y+   LGHGS       IPR V   L GI +  ISCG +HT  V  
Sbjct: 61  IDKEGKLYTWGSNEYHQ--LGHGSSNQDIQSIPRVVDA-LRGIKIVDISCGEYHTGAVDE 117

Query: 369 AGHLFTFGDGSF-----GALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVA 421
            G LFT+G G       GALGH      SIPR V TL  +G+    V CG  HT A+   
Sbjct: 118 EGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL--- 174

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      T  G+++ WG+G+ GRLG+G  +    PE V    DENI  ++ G D +
Sbjct: 175 -----------TKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFT 223

Query: 482 VALTTSGHVYTMGSAAYGQLG--------------VPVA----------------DGLVP 511
            A+T  G VY+ G  ++ QLG              +PV                 D    
Sbjct: 224 FAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAA 283

Query: 512 TRVDGEI----AESFVE-------------EVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              DG++    A+ ++E              V CG Y+ AAL+++  ++T+GKG +  LG
Sbjct: 284 VTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLG 343

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           HG++  +  P LV+ L    V  + CG
Sbjct: 344 HGERKTQLQPLLVESLNRYNVVSMTCG 370



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 170/358 (47%), Gaps = 57/358 (15%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            D  G ++ WG   +N +     H++G+  S Q    +P+ V++   + + +I+CG  H 
Sbjct: 61  IDKEGKLYTWG---SNEY-----HQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHT 112

Query: 257 VLVTKQGEIFSWG-----EESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEYHTC 309
             V ++G++F+WG      +  G LGH    D S P+L+  L   GV V+ V CGE HT 
Sbjct: 113 GAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTV 172

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A+T+ G+++ WG+G Y  G LG+G+  +  +P  V    D  +++ IS G   T  +T  
Sbjct: 173 ALTKDGEIWAWGNGEY--GRLGNGASDNFEVPEPVEYFAD-ENIASISAGRDFTFAITEH 229

Query: 370 GHLFTFGDGSFGALGHGDHIST------SIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           G ++++G  S   LG G  ++       +IP  VE L  +   +VS G  H AAV     
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAV----- 284

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T+ GK+F WG            +  L P  +  L DE I  V CG   + A
Sbjct: 285 ---------TNDGKMFMWG-----------AKLWLEPHEMTILKDETIISVQCGRYYTAA 324

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALT 537
           L+ SG+++T G      LG     G   T++   + ES     V  + CG  H+ ALT
Sbjct: 325 LSASGNLFTFGKGHSNCLG----HGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           ++ CG  +   ++  G +F++G+     LGHG       P L+E L+  NV  + CG  H
Sbjct: 314 SVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSH 373

Query: 308 TCAVTR 313
             A+T+
Sbjct: 374 MGALTK 379


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V  G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGA 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QV  G   S AL+ SG V+  G   
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ QG++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGRNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + +  G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---QGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG  S G+LG G+E    + PQ +  L G+ +  V 
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG   ++G LG     +G  F  Q     P+ V S   + +  +  G  H+  ++
Sbjct: 156 GQFFTWGRN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 170/336 (50%), Gaps = 22/336 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+A   T+  D+  + CG  H +LV K G++FS+G    G+LGH R    + P  ++ L 
Sbjct: 25  PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  VACG  HT A    G+++ WG  +  +G LG   + S     K+  +L    + 
Sbjct: 83  AHNITQVACGAQHTLAQNEWGEVFAWGSNS--NGQLGLNVEESMMPTPKMVKSLATKQVV 140

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVW 413
            I+CG  H+  +T+ G ++ +G  S G LG G      + P  V+ L+G+  + +SCG  
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCG-- 198

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
                  A  S + +PSG+     ++ WG    G+LG GD   R  P  +  L  + +  
Sbjct: 199 -------ADFSFAVTPSGA-----VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTY 246

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           + CG D + ALT  G V+T G+  YGQLG    A+ ++P +V  E+  + V ++ CG  H
Sbjct: 247 IRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKV-LELMGTTVTQICCGRCH 305

Query: 533 VAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             A   S  ++Y +G G +GQLG     N NSP LV
Sbjct: 306 TLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 137/272 (50%), Gaps = 29/272 (10%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +++ V   + H  A  ++   G+VF WG   +NG LG            ++    PK V+
Sbjct: 85  NITQVACGAQHTLAQNEW---GEVFAWGSN-SNGQLGLN--------VEESMMPTPKMVK 132

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNV 298
           S     V  IACG  H++ +T  GEI+ WG  S G+LG G      + P L+++L G+ +
Sbjct: 133 SLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPI 192

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
             ++CG   + AVT SG +Y WG  ++  G LG G       P ++  +L    ++YI C
Sbjct: 193 SHISCGADFSFAVTPSGAVYGWGKNSF--GQLGLGDTTDRPQPTQLK-SLRFQRVTYIRC 249

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G+ HTA +T  G +FTFG G +G LGH    +  +PR+V  L G   T++ CG  HT A 
Sbjct: 250 GMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAF 309

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
           V              S G+++ +G G  G+LG
Sbjct: 310 V-------------PSKGRIYAFGLGGSGQLG 328



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 23/284 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           V CGE HT  V + G L+++G   Y  G LGH    +   P  V G L+  +++ ++CG 
Sbjct: 39  VGCGENHTILVMKDGKLFSFGLNDY--GQLGHCRSRTRAEP--VDG-LEAHNITQVACGA 93

Query: 361 WHTAVVTSAGHLFTFGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            HT      G +F +G  S G LG + +      P+ V++L   +  +++CG  H+ A+ 
Sbjct: 94  QHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMAL- 152

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECVAPLIDENICQVACGH 478
                        T+ G+++ WG    G+LG G    P   P  V  L    I  ++CG 
Sbjct: 153 -------------TNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGA 199

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           D S A+T SG VY  G  ++GQLG+    D   PT++   +    V  + CG  H AALT
Sbjct: 200 DFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKS-LRFQRVTYIRCGMDHTAALT 258

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
               V+T+G G  GQLGH    N   P  V  L    V ++ CG
Sbjct: 259 RDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCG 302



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 26/239 (10%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           + CG  HT +V   G LF+FG   +G LGH    + + P  V+ L     T+V+CG  HT
Sbjct: 39  VGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGAQHT 96

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQV 474
            A                  G++F WG    G+LG   +E  +  P+ V  L  + + Q+
Sbjct: 97  LA--------------QNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQI 142

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACG 529
           ACG   S+ALT  G +Y  GS ++GQLG+     P     +   + G      +  ++CG
Sbjct: 143 ACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP----ISHISCG 198

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A    A+T +  VY WGK + GQLG GD  +R  PT +  L+ ++V  + CG++ TA +
Sbjct: 199 ADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 13/200 (6%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           ++G+++ WG   ++G LG G        S  T    P  V+    + + +I+CGA  +  
Sbjct: 154 NVGEIYCWGSN-SHGQLGLG--------SSGTPETKPCLVKLLQGIPISHISCGADFSFA 204

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           VT  G ++ WG+ S G+LG G   D   P  ++ L    V  + CG  HT A+TR G ++
Sbjct: 205 VTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVF 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGD 377
           T+G G Y  G LGH +  +  +PRKV   L G  ++ I CG  HT A V S G ++ FG 
Sbjct: 265 TFGAGMY--GQLGHCTSANEMLPRKVL-ELMGTTVTQICCGRCHTLAFVPSKGRIYAFGL 321

Query: 378 GSFGALGHGDHISTSIPREV 397
           G  G LG     + + P+ V
Sbjct: 322 GGSGQLGTKSTANVNSPQLV 341


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 184/363 (50%), Gaps = 37/363 (10%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  +ACG  H+V + + GE+++ G  + G+LGH  E++ S P+ I  L+G ++  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACG 92

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           E H+ A++  G +++WG G+   G LG  + + +  +PR +   L+   +  ISCG WH 
Sbjct: 93  ESHSVALSDQGQVFSWGAGS--DGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             + + G  FT+G  S+G LG G    S + P+ V++L G+   +V+ G  H+ A+ ++ 
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS- 208

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                        G +F WG    G+LG  D+  R  P  V  L  + +  ++CG + + 
Sbjct: 209 -------------GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTA 255

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-K 541
            LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG +H  A   +S  
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G G  GQLG G   N   P+ V               D  K   VK +  G + T 
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 163/326 (50%), Gaps = 25/326 (7%)

Query: 265 IFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G G   +  +  PQ+   +   NV+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            T   G LGH S+ S   P  + G L G H+ +++CG  H+  ++  G +F++G GS G 
Sbjct: 61  NT--KGQLGHESEGS--KPEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 383 LGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG      + ++PR ++ L      ++SCG WH  A  +A D            G+ FTW
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA--LAAD------------GQFFTW 161

Query: 442 GDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  + GQ
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221

Query: 501 LGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  V    ++  V  ++CG  H A LT +  V+T+G G+ GQLGH   +
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +  +P  V  L   +V ++ CG + T
Sbjct: 281 DEVNPRRVLELMGSEVSQIACGRHHT 306



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H+V ++ QG++FSWG  S G+LG     D V+ P+LI+ L
Sbjct: 75  PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  ++CG +H  A+   G  +TWG  +Y  G LG G +       +   +LDGI L
Sbjct: 135 NQQTILQISCGNWHCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  S G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G    GQLG
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   N +   G+  +G     Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGQ---NSY---GQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+ S G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  +S I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 170/330 (51%), Gaps = 28/330 (8%)

Query: 265 IFSWGEESGGRLGH-GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +++WG     RLG  G   D   P+LI++     ++ VACG  HT  +   G L+++G  
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGI--HLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            Y  G LG+G+KV    P   S ++  +   L  ++CG +H+A +   G +FT+G G  G
Sbjct: 72  QY--GQLGNGTKVDS--PLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGH D  + +IP  +  L   R  ++ CG   TAA+   TD              L+TW
Sbjct: 128 RLGHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAI---TDDG------------LYTW 170

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDEN--ICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           G G+ G+LG G  E    P+ V    D N  I Q+ACG    +  T SG VYT GS  +G
Sbjct: 171 GWGEHGQLGQGSLEDSYGPKKVI-FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFG 229

Query: 500 QLGVPVADGLVPTRVD-GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           QLG+   + +  + V    +A   V  VA G  H AA+T+T  ++TWG GA GQ GHGD 
Sbjct: 230 QLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDY 289

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           ++ + P LV+ L    + +V CG NFT  +
Sbjct: 290 NDCDMPFLVESLVGVFILKVFCGHNFTVAL 319



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 146/296 (49%), Gaps = 31/296 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H+  +   G +F+WG    GRLGH  E   + P  I  L       + CG + T
Sbjct: 102 VACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLP--RAHKIFCGYHIT 159

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T  G LYTWG G +  G LG GS    + P+KV  +   + +S ++CG  H  V T 
Sbjct: 160 AAITDDG-LYTWGWGEH--GQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTE 216

Query: 369 AGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           +G ++T+G   FG LG G +    S P  + +L G+  T V+ G  H+AAV         
Sbjct: 217 SGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAV--------- 267

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T+ G LFTWG G +G+ GHGD      P  V  L+   I +V CGH+ +VAL+  
Sbjct: 268 -----TNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKD 322

Query: 488 GHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             +Y  G+ +YGQLG    DG       P ++   I  +   ++ CG +H    T+
Sbjct: 323 NDIYVFGNNSYGQLG----DGSKSSCCTPRKLFFSIPGTI--DITCGHFHCTLWTT 372



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 18/215 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAVLVTK 261
           ++ WG G  +G LG G            D+  PK V    A L +  +ACG RH ++ T+
Sbjct: 167 LYTWGWG-EHGQLGQGS---------LEDSYGPKKVIFDDANLAISQLACGDRHCLVRTE 216

Query: 262 QGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            G++++WG    G+LG GR  ++ S P L+  L+G+ V  VA G+ H+ AVT +G L+TW
Sbjct: 217 SGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTW 276

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G    G  GHG    C +P  V  +L G+ +  + CG   T  ++    ++ FG+ S+
Sbjct: 277 GCGA--EGQCGHGDYNDCDMPFLVE-SLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSY 333

Query: 381 GALGHGDHISTSIPREV-ETLRGLRTTRVSCGVWH 414
           G LG G   S   PR++  ++ G  T  ++CG +H
Sbjct: 334 GQLGDGSKSSCCTPRKLFFSIPG--TIDITCGHFH 366



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 84/167 (50%), Gaps = 16/167 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDV+ WG     G LG G +   YS         P  + S   + V  +A G RH+  VT
Sbjct: 218 GDVYTWGSN-EFGQLGIGRYNEIYSS--------PVLLTSLAGMMVTFVAAGDRHSAAVT 268

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F+WG  + G+ GHG   D   P L+E L GV +  V CG   T A+++  D+Y +
Sbjct: 269 NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVF 328

Query: 321 GDGTYNSGLLGHGSKVSCWIPRK----VSGNLDGIHLSYISCGLWHT 363
           G+ +Y  G LG GSK SC  PRK    + G +D I   +  C LW T
Sbjct: 329 GNNSY--GQLGDGSKSSCCTPRKLFFSIPGTID-ITCGHFHCTLWTT 372



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 538 STSKVYTWGKGANGQLG-HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHK 592
           ++S +YTWG+  N +LG  G +D+   P L+   ++  +++V CG   T ++    CLH 
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 593 W 593
           +
Sbjct: 68  F 68


>gi|94983836|gb|ABF50623.1| G93-GW [Glycine max]
          Length = 466

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 175/326 (53%), Gaps = 28/326 (8%)

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGF 611
           QLG GD ++R +P  V+ L+D+QV  + CG +FTA I LHK +S  D S C+ C  PFGF
Sbjct: 2   QLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPFGF 61

Query: 612 RRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKRTSGYT 671
            RK+HNCYNCGL+FC+ACSS+K   A LAPS +K +RVCD CF          KR  G  
Sbjct: 62  TRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFD---------KRQGGAH 112

Query: 672 SVVQSPRNRTGNV------NHKTAELADREA-----QGPRLQ-DQLSILSSFDSNKQTES 719
           SV+ S ++R  N        HK +++ +        QGP L   Q     S  S ++   
Sbjct: 113 SVMAS-KSRNYNTQQVLKHQHKISDVTEDRGETTVTQGPMLSLGQSCYRKSMPSGRKDWK 171

Query: 720 RLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASSSRMSSLATS 779
             + Q ++ +++D+    +    Q G++  P  ++F    ++       SSS+      S
Sbjct: 172 --NHQEIQQDVEDSSSM-LGGMPQWGQVPCP--AMFQINCTENPV-VHVSSSKNKLATVS 225

Query: 780 PVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAELERTSKQLKT 839
           P + +S++   S+    D+ + +  L +E+ +LRA+ + L  + E    +++   ++++ 
Sbjct: 226 PFNVESTAYNFSSNVETDTTKSDKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIEE 285

Query: 840 VTAIAEDEAEKCKTANEVIKSLTVQG 865
              +A +EA KCK A EVIK+L ++ 
Sbjct: 286 SWFVAREEAAKCKAAKEVIKALALRA 311


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 182/363 (50%), Gaps = 37/363 (10%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  +ACG  H+V + + GE+++ G  + G+LGH  E   S P+ I  L+G ++  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACG 92

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           E H+ A++  G L++WG G+   G LG  + + +  +PR +   L+   +  +SCG WH 
Sbjct: 93  ESHSVALSDQGQLFSWGAGS--DGQLGLTTIEDAVTVPRLIK-KLNQQTILQVSCGNWHC 149

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             + + G  FT+G  S+G LG G    S + P+ V++L G+   +V+ G  H+ A+ ++ 
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS- 208

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                        G +F WG    G+LG  D+  R  P  V  L  + +  ++CG + + 
Sbjct: 209 -------------GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTA 255

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-K 541
            LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG +H  A   +S  
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G G  GQLG G   N   P+ V               D  K   VK +  G + T 
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 164/329 (49%), Gaps = 31/329 (9%)

Query: 265 IFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G G   +  +  PQ+   +   NV+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   GSK     P ++ G L G H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHDCEGSK-----PEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGS 112

Query: 380 FGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      + ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  +
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V    ++  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++  +P  V  L   +V ++ CG + T
Sbjct: 278 SMNDEVNPRRVLELMGSEVSQIACGRHHT 306



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H+V ++ QG++FSWG  S G+LG     D V+ P+LI+ L
Sbjct: 75  PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  +Y  G LG G +       +   +LDGI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  S G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G    GQLG
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 133/271 (49%), Gaps = 31/271 (11%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTM 242
           V    SH  A  D    G +F WG G ++G LG          +   DA+ +P+ ++   
Sbjct: 89  VACGESHSVALSD---QGQLFSWGAG-SDGQLG---------LTTIEDAVTVPRLIKKLN 135

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELV 301
              +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ ++ L G+ +  V
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV 195

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A G  H+ A++ SG ++ WG  +  SG LG   +     P  V   L    + YISCG  
Sbjct: 196 AAGGAHSFALSLSGAVFGWGKNS--SGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEE 252

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           HTAV+T +G +FTFG GS G LGH        PR V  L G   ++++CG  HT A V  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV-- 310

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                       S G ++ +G G +G+LG G
Sbjct: 311 -----------PSSGMIYAFGCGTRGQLGTG 330



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   N +   G+  +G     Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGQ---NSY---GQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+ S G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  +S I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT +G V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 377 LCSKYENYSPAVDFRTMNQAH 397



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 158/325 (48%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QV  G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT    V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  V 
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVT 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T  G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +  G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVTAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T++G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
 gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
          Length = 1196

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 147/299 (49%), Gaps = 32/299 (10%)

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            G  +T+G G+ G+LGHG+      P  ++    L  + V+C     AAV+          
Sbjct: 928  GDAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLDVSMVACENSAGAAVMFT-------- 979

Query: 430  SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT-SG 488
                  G+LFTWG G+KGRLGH  +  R  P          + Q+A G   S  +T   G
Sbjct: 980  ------GELFTWGKGEKGRLGH--ETFRNMP----------VKQIAAGSAHSGCITEGDG 1021

Query: 489  HVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
             VY  GS  YGQ+G       L P RV  +  +   +++ CG  HV  L     VY WG 
Sbjct: 1022 AVYMWGSGIYGQIGNNTNTHALTPMRV--KFGKLKAKQLVCGVNHVLVLMEDGSVYGWGA 1079

Query: 548  GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
            G  G+LG+G++ ++  P  ++F  DK V+ +  G + +A +C H+WV   D   C SC +
Sbjct: 1080 GTYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDCMSCKS 1139

Query: 608  PFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKTDTKLKR 666
             F F R+RH+C  CG +FC +C+ ++     L    ++P RVCD+C+  L       KR
Sbjct: 1140 KFTFLRRRHHCRYCGGIFCGSCTGKRI--TLLRFGFDEPVRVCDNCYQILTNAAQTYKR 1196



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 106/249 (42%), Gaps = 29/249 (11%)

Query: 195  EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGAR 254
            E F+ +GD + WG+G A+G LG G          Q D   P  ++  + LDV  +AC   
Sbjct: 922  EQFERIGDAYTWGQG-ASGSLGHGN---------QEDKKEPLVMKDFLYLDVSMVACENS 971

Query: 255  HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR- 313
                V   GE+F+WG+   GRLGH            E    + V+ +A G  H+  +T  
Sbjct: 972  AGAAVMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEG 1019

Query: 314  SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHL 372
             G +Y WG G Y  G +G+ +      P +V  G L    L    CG+ H  V+   G +
Sbjct: 1020 DGAVYMWGSGIY--GQIGNNTNTHALTPMRVKFGKLKAKQL---VCGVNHVLVLMEDGSV 1074

Query: 373  FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            + +G G++G LG+G+     +P  +          +  G   +AAV              
Sbjct: 1075 YGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDC 1134

Query: 433  TSCGKLFTW 441
             SC   FT+
Sbjct: 1135 MSCKSKFTF 1143



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 33/251 (13%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            PK    T+  D+ N     +      + G+ ++WG+ + G LGHG + D   P +++   
Sbjct: 902  PKFAPITIVHDMENEKQKFKEQF--ERIGDAYTWGQGASGSLGHGNQEDKKEPLVMKDFL 959

Query: 295  GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             ++V +VAC      AV  +G+L+TWG G    G LGH +                + + 
Sbjct: 960  YLDVSMVACENSAGAAVMFTGELFTWGKG--EKGRLGHET-------------FRNMPVK 1004

Query: 355  YISCGLWHTAVVTSA-GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
             I+ G  H+  +T   G ++ +G G +G +G+  +     P  V+    L+  ++ CGV 
Sbjct: 1005 QIAAGSAHSGCITEGDGAVYMWGSGIYGQIGNNTNTHALTPMRVK-FGKLKAKQLVCGVN 1063

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            H   +V+  D            G ++ WG G  GRLG+G++  +  P  +    D+N+  
Sbjct: 1064 H--VLVLMED------------GSVYGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRG 1109

Query: 474  VACGHDLSVAL 484
            +  G   S A+
Sbjct: 1110 LGAGGSSSAAV 1120



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 2   LIWYSGKE---ERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKD 58
           L+W S  +   E  + L  V +I  GQ TA FQ+Y  P+ E  SFSL+Y DR+LD++CKD
Sbjct: 808 LMWGSPNKQSNESIVSLTDVKKICYGQNTAIFQKYKNPDLEGLSFSLLYRDRTLDIVCKD 867

Query: 59  KDEAEVWLVGLKALIT 74
           K E   W+ G+  L++
Sbjct: 868 KQEYHTWVQGITYLLS 883



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 175  ETFRISLSSVVSSSSHGSAHEDFDSLGD--VFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
            ETFR   +  V   + GSAH    + GD  V++WG GI  G +G   +         T A
Sbjct: 996  ETFR---NMPVKQIAAGSAHSGCITEGDGAVYMWGSGIY-GQIGNNTN---------THA 1042

Query: 233  LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            L P  V+    L    + CG  H +++ + G ++ WG  + GRLG+G E+D   P  I  
Sbjct: 1043 LTPMRVKFG-KLKAKQLVCGVNHVLVLMEDGSVYGWGAGTYGRLGNGNESDQRVPVRINF 1101

Query: 293  LSGVNVELVACGEYHTCAV 311
                NV  +  G   + AV
Sbjct: 1102 FDDKNVRGLGAGGSSSAAV 1120


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 168/340 (49%), Gaps = 31/340 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLV-TKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           P  + +     V  + CGA + V V + +G+I+SWG    GRLGHG   DV  P+ I   
Sbjct: 53  PTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFF 112

Query: 294 SGVNVELVACGEYHTCAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           SG  V  VACG+ HT  VT+  G LYT+G     +G LG G    C  P+ V+  L G  
Sbjct: 113 SGRPVARVACGDTHTLVVTQGDGALYTFG--RNQNGQLGLGHTNDCLSPQLVT-ALQGER 169

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +S ++CG  H+   T AG +F++G G +G LG GD      P  V  L G+  T V CG 
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGW 229

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+A V              T  G++FT+G    G+LGHGD      P  VA L    + 
Sbjct: 230 RHSAVV--------------TDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVS 275

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESF--------- 522
            VA G   ++A  + G++Y  G   +GQLG+  + D   PT V G               
Sbjct: 276 TVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATP 335

Query: 523 --VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
             V  +ACG  H  A+T   +VY+WG+G NGQLGHG + +
Sbjct: 336 RRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/325 (35%), Positives = 159/325 (48%), Gaps = 21/325 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  ++CG+ H++ +   G + SWG    G+LGHG+    + P  I  L+   V+ V CG 
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 306 YHTCAVTRS-GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +T AV  S G +Y+WG G +  G LGHG     ++PR ++    G  ++ ++CG  HT 
Sbjct: 72  EYTVAVASSRGQIYSWGWGDF--GRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHTL 128

Query: 365 VVTSA-GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           VVT   G L+TFG    G LG G       P+ V  L+G R + V+CG  H+ A      
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLA------ 182

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                   +T  G +F+WG G  G LG GD + R  P  V  L    +  V CG   S  
Sbjct: 183 --------ATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAV 234

Query: 484 LTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           +T  G V+T G + YGQLG     D   P  V G +    V  VA G  H  A  S   +
Sbjct: 235 VTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAG-LQHCRVSTVAGGWRHTMAADSEGNL 293

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV 567
           Y WG    GQLG GD ++R +PT V
Sbjct: 294 YAWGWNKFGQLGLGDSEDRAAPTPV 318



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 155/317 (48%), Gaps = 40/317 (12%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G ++ WG G   G LG GE           D  +P+ +       V  +ACG  H ++
Sbjct: 80  SRGQIYSWGWG-DFGRLGHGE---------CGDVFVPRPIAFFSGRPVARVACGDTHTLV 129

Query: 259 VTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           VT+  G ++++G    G+LG G   D   PQL+  L G  V  VACG  H+ A T +G +
Sbjct: 130 VTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTV 189

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG G Y  G LG G     + P +V G LDG+ ++ + CG  H+AVVT  G +FTFG 
Sbjct: 190 FSWGWGRY--GNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVTDEGRVFTFGW 246

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
             +G LGHGDH+  + P  V  L+  R + V+ G  HT    +A DS           G 
Sbjct: 247 SKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHT----MAADSE----------GN 292

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPL------------IDENICQVACGHDLSVALT 485
           L+ WG    G+LG GD E R  P  VA                  +  +ACG   +VA+T
Sbjct: 293 LYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVT 352

Query: 486 TSGHVYTMGSAAYGQLG 502
            +G VY+ G    GQLG
Sbjct: 353 EAGEVYSWGRGVNGQLG 369



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 139/287 (48%), Gaps = 19/287 (6%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           V+CG  H+ A+   G + +WG G    G LGHG    C  P  ++   D   +  + CG 
Sbjct: 15  VSCGSSHSIALLDCGVVASWGRG--EDGQLGHGQADQCTSPTCIAALTD-AGVDAVVCGA 71

Query: 361 WHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +T AV +S G ++++G G FG LGHG+     +PR +    G    RV+CG  HT  VV
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT-LVV 130

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
              D            G L+T+G    G+LG G     L P+ V  L  E +  VACG +
Sbjct: 131 TQGD------------GALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSE 178

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            S+A T +G V++ G   YG LG     D   PTRV G +    V  V CG  H A +T 
Sbjct: 179 HSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVTD 237

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             +V+T+G    GQLGHGD  +   P LV  L+  +V  V  G   T
Sbjct: 238 EGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHT 284



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 16/235 (6%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +SCG  H+  +   G + ++G G  G LGHG     + P  +  L       V CG  +T
Sbjct: 15  VSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYT 74

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            AV             ++S G++++WG GD GRLGHG+      P  +A      + +VA
Sbjct: 75  VAV-------------ASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVA 121

Query: 476 CGHDLSVALTTS-GHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHV 533
           CG   ++ +T   G +YT G    GQLG+    D L P  V     E  V  VACG+ H 
Sbjct: 122 CGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGER-VSSVACGSEHS 180

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            A T    V++WG G  G LG GD  +R +PT V  L    V  VVCG   +A++
Sbjct: 181 LAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVV 235



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 113/254 (44%), Gaps = 39/254 (15%)

Query: 224 YSFSRQ----------TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           Y+F R            D L P+ V +     V ++ACG+ H++  T+ G +FSWG    
Sbjct: 138 YTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRY 197

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           G LG G   D   P  +  L GV V  V CG  H+  VT  G ++T+G   Y  G LGHG
Sbjct: 198 GNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKY--GQLGHG 255

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
             V    P  V+G L    +S ++ G  HT    S G+L+ +G   FG LG GD    + 
Sbjct: 256 DHVDHTRPCLVAG-LQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAA 314

Query: 394 PREVETLRGL------------RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           P  V                  R   ++CG  HT AV              T  G++++W
Sbjct: 315 PTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAV--------------TEAGEVYSW 360

Query: 442 GDGDKGRLGHGDKE 455
           G G  G+LGHG ++
Sbjct: 361 GRGVNGQLGHGAEQ 374



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 18/181 (9%)

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R   VSCG  H+ A++               CG + +WG G+ G+LGHG  +    P C+
Sbjct: 11  RVLGVSCGSSHSIALL--------------DCGVVASWGRGEDGQLGHGQADQCTSPTCI 56

Query: 464 APLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAES 521
           A L D  +  V CG + +VA+ +S G +Y+ G   +G+LG     D  VP R     +  
Sbjct: 57  AALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVP-RPIAFFSGR 115

Query: 522 FVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
            V  VACG  H   +T     +YT+G+  NGQLG G  ++  SP LV  L+ ++V  V C
Sbjct: 116 PVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVAC 175

Query: 581 G 581
           G
Sbjct: 176 G 176



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVA 527
           +  +  V+CG   S+AL   G V + G    GQLG   AD          + ++ V+ V 
Sbjct: 9   EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVV 68

Query: 528 CGA-YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           CGA Y VA  +S  ++Y+WG G  G+LGHG+  +   P  + F   + V RV CG   T 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTL 128

Query: 587 II 588
           ++
Sbjct: 129 VV 130



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           +ACG RH V VT+ GE++SWG    G+LGHG E D+
Sbjct: 341 LACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 171/370 (46%), Gaps = 34/370 (9%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +F WG  I     LGG E           +   P+ V    A ++  IACG  + + VTK
Sbjct: 1   MFCWGSTIHGELGLGGIEDE---------NIFTPREVNFEKANEIEQIACGDNYTIAVTK 51

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +G+++S G    G+L  G+E      QLI  +  +     ACG  HT  V   G L++WG
Sbjct: 52  EGQVYSCGNNDHGQL--GQEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109

Query: 322 DGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
                 G LG   +VS  I  PR V   L    +  I+CGL H+  +T+ G L+ +G  S
Sbjct: 110 SNV--EGQLGL-DRVSATIREPRMVK-TLGTKIIVQIACGLKHSIALTNNGELYAWGSNS 165

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G      + P+ V +L  +    V+CG +HT  +              +  G +
Sbjct: 166 DGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVI--------------SKSGAV 211

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F WG    G+LG  D + R  P  +  L +  +C  ACG + SV LT  G V+T G+  Y
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMY 271

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGD 557
           GQLG       +  R   E+  S V +++CG  H  AL  S  +VY WG G  GQLG+  
Sbjct: 272 GQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRI 331

Query: 558 KDNRNSPTLV 567
             N  +P +V
Sbjct: 332 AQNSTTPQVV 341



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 133/264 (50%), Gaps = 26/264 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG  +       G  RV  +         P+ V++     +  IACG +H++ +T
Sbjct: 103 GQLFSWGSNVEGQL---GLDRVSATIRE------PRMVKTLGTKIIVQIACGLKHSIALT 153

Query: 261 KQGEIFSWGEESGGRLGHGREADVS-HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             GE+++WG  S G+LG G +  +   P+L+  L+ V +  VACG YHT  +++SG ++ 
Sbjct: 154 NNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFA 213

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG  T+  G LG     +  +P ++   L    + Y +CG   +  +T  G +FT G G 
Sbjct: 214 WGRNTF--GQLGLSDIQNRNVPCQLR-TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LGHG+  S  +PR++  L G   T++SCG  HT A+V              S G+++
Sbjct: 271 YGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV-------------PSRGRVY 317

Query: 440 TWGDGDKGRLGHGDKEPRLFPECV 463
            WG G  G+LG+   +    P+ V
Sbjct: 318 AWGLGGAGQLGNRIAQNSTTPQVV 341



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 159/325 (48%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   + ++  P+ +       +E +ACG+ +T AVT+ G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
              + G LG   G K      + +SG +D +     +CG  HT VV   G LF++G    
Sbjct: 61  N--DHGQLGQEKGRKRL----QLISG-IDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVE 113

Query: 381 GALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           G LG  D +S +I  PR V+TL      +++CG+ H+ A+              T+ G+L
Sbjct: 114 GQLGL-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIAL--------------TNNGEL 158

Query: 439 FTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           + WG    G+LG G D +  L P+ V  L    I  VACG   ++ ++ SG V+  G   
Sbjct: 159 YAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNT 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+  + +  VP ++   +  S V   ACG      LT    V+T G G  GQLGHG
Sbjct: 219 FGQLGLSDIQNRNVPCQLR-TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
           +K +   P  +  L    V ++ CG
Sbjct: 278 NKTSEILPRQIMELMGSTVTQISCG 302



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 27/280 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   +    LG     + + PR+V+       +  I+CG  +T  VT  G +++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFE-KANEIEQIACGDNYTIAVTKEGQVYSCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +   G LG          + +  +  L   + +CG  HT  V                 G
Sbjct: 60  NNDHGQLGQEK--GRKRLQLISGIDPLAFRKAACGSSHTLVV--------------NEWG 103

Query: 437 KLFTWGDGDKGRLGHGD-----KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
           +LF+WG   +G+LG        +EPR+    V  L  + I Q+ACG   S+ALT +G +Y
Sbjct: 104 QLFSWGSNVEGQLGLDRVSATIREPRM----VKTLGTKIIVQIACGLKHSIALTNNGELY 159

Query: 492 TMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
             GS + GQLG+     + +  ++   +A   +  VACG YH   ++ +  V+ WG+   
Sbjct: 160 AWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTF 219

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           GQLG  D  NRN P  +  L++ +V    CG  F+  + +
Sbjct: 220 GQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM 259


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 482

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 483 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 540

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 600

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 601 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 648

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 707

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 708 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA-- 467

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 468 -YNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 516

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 562

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 563 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 622

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 623 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 682

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 683 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 489 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 539

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 540 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 596

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 597 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 653

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 654 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 713

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 714 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 757

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 758 ACGPAQSFA 766


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 453

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 454 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 511

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 512 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 571

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 572 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 619

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 620 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 678

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 679 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 386 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA-- 438

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 439 -YNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 487

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 488 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 533

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 534 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 593

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 594 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 653

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 654 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 698



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 460 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 510

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 511 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 567

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 568 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 624

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 625 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 684

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 685 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 728

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 729 ACGPAQSFA 737


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 610 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 716

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 476 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 525

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 571

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 548

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 549 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 605

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 606 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 662

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 723 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 766

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 767 ACGPAQSFA 775


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 35/355 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P   E    L V  IAC  +  +++++ G +++              +D   PQL++ L+
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 482

Query: 295 GVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS---GNLD 349
             N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V    P+ +S   G   
Sbjct: 483 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 540

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  V  L+GL+   V+
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 600

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG            S  +     T  G++++WGDGD G+LG G  +    P+ +  L D 
Sbjct: 601 CG------------SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 648

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
           ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++G   +  ++ VA 
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 707

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ H  ALT  S+V++W  G+N Q  H D  +  +  P  +  L  K +  + CG
Sbjct: 708 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 466

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 467 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDG-HHYLALAATGEVYSWGCGDGG 516

Query: 382 ALGHGDHISTSIPREVETLRGLR----TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +       ++CG  ++AA+              T+ G+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 562

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 563 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 622

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 623 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 682

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 683 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 41/309 (13%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG------EHRVGYSFSRQTDALLPKAV 238
           +++ S G  +    + G+V+ WG G   G LG G      E +V  +FS +         
Sbjct: 489 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGDTVPLEEPKVISAFSGKQ-------- 539

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                  V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V
Sbjct: 540 ---AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 596

Query: 299 ELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             VAC  G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  +
Sbjct: 597 IDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKV 653

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            CG   +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  
Sbjct: 654 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 713

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQV 474
           A+              T   ++ +WG  D+ +  H D      PE  A P +D ++I  +
Sbjct: 714 AL--------------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGI 757

Query: 475 ACGHDLSVA 483
           ACG   S A
Sbjct: 758 ACGPAQSFA 766


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 171/326 (52%), Gaps = 22/326 (6%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  +ACG  H+V + + GE+++ G  + G+LGH  E   S P+ I  L+G ++  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACG 92

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           E H+ A++  G L++WG G+   G LG  + + +  +PR +   L+   +  +SCG WH 
Sbjct: 93  ESHSLALSDQGQLFSWGAGS--DGQLGLTTIEDAVTVPRLIK-KLNQQTILQVSCGNWHC 149

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             + + G  FT+G  S+G LG G    S + P+ V++L G+   +V+ G  H+ A+ ++ 
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS- 208

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                        G +F WG    G+LG  D+  R  P  V  L  + +  ++CG + + 
Sbjct: 209 -------------GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTA 255

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-K 541
            LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG +H  A   +S  
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           +Y +G G  GQLG G   N   P+ V
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPV 341



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 164/329 (49%), Gaps = 31/329 (9%)

Query: 265 IFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G G   +  V  PQ+   +   NV+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   GSK     P ++ G L G H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHDCEGSK-----PEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 380 FGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      + ++PR ++ L      +VSCG WH  A+  A D            G+ 
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLAL--AAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G  +
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNS 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V    ++  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 SGQLGLSDERDRESPCHVKLLRSQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++  +P  V  L   +V ++ CG + T
Sbjct: 278 SMNDEVNPRRVLELMGSEVSQIACGRHHT 306



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ QG++FSWG  S G+LG     D V+ P+LI+ L
Sbjct: 75  PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  +Y  G LG G +       +   +LDGI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  S G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G    GQLG
Sbjct: 299 IACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 133/271 (49%), Gaps = 31/271 (11%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTM 242
           V    SH  A  D    G +F WG G ++G LG          +   DA+ +P+ ++   
Sbjct: 89  VACGESHSLALSD---QGQLFSWGAG-SDGQLG---------LTTIEDAVTVPRLIKKLN 135

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELV 301
              +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ ++ L G+ +  V
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV 195

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A G  H+ A++ SG ++ WG  +  SG LG   +     P  V   L    + YISCG  
Sbjct: 196 AAGGAHSFALSLSGAVFGWGKNS--SGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEE 252

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           HTAV+T +G +FTFG GS G LGH        PR V  L G   ++++CG  HT A V  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV-- 310

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                       S G ++ +G G +G+LG G
Sbjct: 311 -----------PSSGMIYAFGCGTRGQLGTG 330



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 27/278 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +  WG  ++  G  G GS +   +P  +V G +   ++  ++CG  H+  +   G ++T 
Sbjct: 1   MLCWGYSSF--GQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTC 58

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G  + G LGH      S P ++  L G     V+CG  H+ A+              +  
Sbjct: 59  GLNTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSLAL--------------SDQ 102

Query: 436 GKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF+WG G  G+LG    E  +  P  +  L  + I QV+CG+   +AL   G  +T G
Sbjct: 103 GQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWG 162

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGAN 550
             +YGQLG+       P++   +  +S     + +VA G  H  AL+ +  V+ WGK ++
Sbjct: 163 QNSYGQLGLGKE---CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ +R SP  V  L+ ++V  + CG   TA++
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+   N +   G+  +G     Q     P+ V+S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGQ---NSY---GQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+ S G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  +S I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 37/362 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG  + + S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGS--DGQLGLMTIEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V  G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT SG V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC 589
           +C
Sbjct: 377 LC 378



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QV  G   S AL+ SG V+  G   
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ QG++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGRNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + +  G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---QGQLFSWGAG-SDGQLG--------LMTIEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG  S G+LG G+E    + PQ +  L G+ +  V 
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG   ++G LG     +G  F  Q     P+ V S   + +  +  G  H+  ++
Sbjct: 156 GQFFTWGRN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 37/368 (10%)

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           +G+ +    + + P   E    L V  IAC  +  +++++ G +++              
Sbjct: 628 IGWKY--YANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYN 675

Query: 282 ADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           +D   PQL++ L+  N+  +A     +H  A+  +G++Y+WG G  + G LGHG  V   
Sbjct: 676 SDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 733

Query: 340 IPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGHG     +IP  
Sbjct: 734 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 793

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V  L+GL+   V+CG      + V            T  G++++WGDGD G+LG G  + 
Sbjct: 794 VAGLKGLKVIDVACGSGDAQTLAV------------TENGQVWSWGDGDYGKLGRGGSDG 841

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVD 515
              P+ +  L D ++ +V CG   S+ALT  G VY+ G     +LG    + +  P  ++
Sbjct: 842 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 901

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDK 573
           G   +  ++ VA G+ H  ALT  S+V++W  G+N Q  H D  +  +  P+ +  L  K
Sbjct: 902 GLQGKKVID-VAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTK 958

Query: 574 QVKRVVCG 581
            +  + CG
Sbjct: 959 HIVGIACG 966



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 621 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 672

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + I ++  S G  H   + + G ++++G G  G
Sbjct: 673 AYNSDTLA---------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 722

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 723 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 768

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 769 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 828

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 829 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 888

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 889 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 933



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 25/295 (8%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+V+ WG G   G LG G+     +   +   ++          
Sbjct: 695 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGD-----TVPLEEPKVISAFSGKQAGK 748

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  VAC 
Sbjct: 749 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 808

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 865

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 866 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL---- 921

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
                     T   ++ +WG  D+ +     +  +  P  +  L  ++I  +ACG
Sbjct: 922 ----------TEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 192/414 (46%), Gaps = 49/414 (11%)

Query: 194 HEDFDSLGDVFIWGEGI-ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
           HED    G+  +W  G  + G LG G+     SF R         +++    ++  I  G
Sbjct: 367 HED---EGEREVWSCGQNSYGELGHGDTASRKSFER---------IQALQQKEIIQIGAG 414

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAV 311
             H V++T  G++F+ G    G+ G G  A VSH  ++ ++ SG +      G  HT  V
Sbjct: 415 NEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILV 474

Query: 312 TRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           +  G + T G   YN  G LGHG+  S  +P K+  +L+   +  +SC  +HT +    G
Sbjct: 475 STDGRVATCG---YNYRGQLGHGNTTSESVP-KIIRSLENKIVRLVSCSYYHTVLACEDG 530

Query: 371 HL---FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           +L   +TFG   +G LGH D I   IP+ VE L   +   V+CG +HT  V V+      
Sbjct: 531 NLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVS------ 584

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-QVACGHDLSVALTT 486
                   GK F +G  D G+LG    E +L P  V   ++   C ++ CG+  ++AL +
Sbjct: 585 --------GKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCS 636

Query: 487 SGHVYTMGSAAYGQLGVPVADG------------LVPTRVDGEIAESFVEEVACGAYHVA 534
             H++  G   YGQLG+  ++                 R+  E+    +  +ACG YH  
Sbjct: 637 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTI 696

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A++    +Y +G+  +GQLG GD   R  P  +D    K++  V  G   T ++
Sbjct: 697 AVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 137/305 (44%), Gaps = 39/305 (12%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H +LV+  G + + G    G+LGHG     S P++I  L    V LV+C  YHT   
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 312 TRSG---DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              G   +LYT+G   Y  G LGH   +   IP+ V   L    +  ++CG +HT VVT 
Sbjct: 527 CEDGNLQNLYTFGRNDY--GQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTV 583

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           +G  F FG   +G LG     +   P +V   L       + CG +HT A+         
Sbjct: 584 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC-------- 635

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHG----------DKEPRLFPECVAPLIDE----NICQ 473
                 S   LF +G  D G+LG G            + + F    A LIDE    +I +
Sbjct: 636 ------SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSN--ARLIDELEGKDIVR 687

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH 532
           +ACG   ++A++ +G +Y  G   +GQLG     + + P  +D  + +  +  VA G YH
Sbjct: 688 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-IALVAAGFYH 746

Query: 533 VAALT 537
              LT
Sbjct: 747 TVVLT 751



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           ++++ G    G LGHGD   R   E +  L  + I Q+  G++ +V LT  G V+T G  
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY----HVAALTSTSKVYTWGKGANGQ 552
             GQ G     G        EI +         AY    H   +++  +V T G    GQ
Sbjct: 434 DNGQCG---QGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQ 490

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           LGHG+  + + P ++  L++K V+ V C    T + C
Sbjct: 491 LGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 527


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 165/323 (51%), Gaps = 20/323 (6%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ GA H+V +     + SWG    G+LGHG   D   P ++       +  V CG  HT
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A +     +Y+WG G +  G LGHG+    + P+ V   L G+ +  I+CG  H   VT
Sbjct: 78  TAYSEDELQVYSWGWGDF--GRLGHGNSSDVFTPQPVKA-LQGLKIKQIACGDSHCLAVT 134

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            AG + ++G    G LG G    + +P++++    +    ++ G  HTAAV         
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAV--------- 185

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G L+ WG G  G LG GD+  RL PE V+ +  E +  VACG   ++ ++ S
Sbjct: 186 -----TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDS 240

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G++YT G + YGQLG     D LVP +V+  + +S + +++ G  H  ALTS  K+Y WG
Sbjct: 241 GNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQISGGWRHTMALTSEGKLYGWG 299

Query: 547 KGANGQLGHGDKDNRNSPTLVDF 569
               GQ+G G+ D+ +SP  V F
Sbjct: 300 WNKFGQVGVGNNDDHSSPGQVSF 322



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 29/292 (9%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +++SV+  + H +A+ + D L  V+ WG G           R+G+  S  +D   P+ V+
Sbjct: 66  AITSVICGADHTTAYSE-DEL-QVYSWGWGDFG--------RLGHGNS--SDVFTPQPVK 113

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           +   L +  IACG  H + VT  GE+ SWG    G+LG G   D   PQ I+    V V+
Sbjct: 114 ALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           ++A G  HT AVT  GDLY WG G Y  G LG G +    +P KVS +++G  +  ++CG
Sbjct: 174 MIAAGAEHTAAVTEDGDLYGWGWGRY--GNLGLGDRNDRLLPEKVS-SVEGEKMVLVACG 230

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT  V+ +G+L+T+G   +G LGHGD     +P +VE L+    +++S G  HT A+ 
Sbjct: 231 WRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL- 289

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                        TS GKL+ WG    G++G G+ +    P  V+    EN+
Sbjct: 290 -------------TSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSENL 328



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 24/295 (8%)

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V LV+ G  H+ A+     L +WG G    G LGHG      +P  +SG  D   ++ + 
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRG--EDGQLGHGDAEDRLVPTVLSG-FDAPAITSVI 71

Query: 358 CGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           CG  HT A       ++++G G FG LGHG+      P+ V+ L+GL+  +++CG  H  
Sbjct: 72  CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCL 131

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC--QV 474
           AV +A              G++ +WG    G+LG G  E  L P+ +     E++C   +
Sbjct: 132 AVTMA--------------GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMI 175

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G + + A+T  G +Y  G   YG LG+    D L+P +V     E  V  VACG  H 
Sbjct: 176 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVL-VACGWRHT 234

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             ++ +  +YT+G    GQLGHGD ++   P  V+ LKD  + ++  G   T  +
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL 289



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 3/115 (2%)

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVA 527
           + +  V+ G   SVAL T   + + G    GQLG   A D LVPT + G  A + +  V 
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA-ITSVI 71

Query: 528 CGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           CGA H  A +    +VY+WG G  G+LGHG+  +  +P  V  L+  ++K++ CG
Sbjct: 72  CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 181/361 (50%), Gaps = 39/361 (10%)

Query: 235 PKAVESTMALD-VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           PK +ES  + + +  + CG  H+ ++T  GE+  WG    G+LG G   D+  P+++  +
Sbjct: 32  PKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSI 91

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-------KVSCWIPRKVSG 346
              NV  V+C + H+ A+   G LYTW  G   SG LG GS        + C  P+ V  
Sbjct: 92  K--NVINVSCSDRHSAAILEDGRLYTW--GCNKSGKLGIGSLNVNLNNNIIC-TPQLVEK 146

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L+   +  +SCG +HTA +T     +T+G G  G LGHGD      P+ +E+L GL   
Sbjct: 147 LLNE-KVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVK 205

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-AP 465
            + CG  HTA ++              + GK++  G G  G+LG G KE    P+ +   
Sbjct: 206 NIVCGGHHTAILL--------------NNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGS 251

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAES 521
           L +++I +V+ G+  S  +TT G VYT G    G+LG     P  D L P  V+ ++   
Sbjct: 252 LTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVE-KLNSI 308

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR-NSPTLVDFLKDKQVKRVVC 580
               ++CG  H   +++   VY WG   N  LGHG  D++ N PTL   L++K + +V C
Sbjct: 309 IAVNISCGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSKPNDPTLHPILQNKNIVQVSC 366

Query: 581 G 581
           G
Sbjct: 367 G 367



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 161/335 (48%), Gaps = 32/335 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWGDG 323
           + +WG    G+LG   E     P+LIE L   N ++ V CG +H+  +T SG+L  WG G
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
               G LG G      IPR ++   + I+   +SC   H+A +   G L+T+G    G L
Sbjct: 70  --GCGQLGLGDLKDIVIPRVMTSIKNVIN---VSCSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 384 GHGDHISTS------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G G             P+ VE L   +  +VSCG +HTA +              T   K
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACL--------------TDLNK 170

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
            +TWG G +GRLGHGD      P+ +  L   ++  + CG   +  L  +G VY  G  A
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH- 555
           +G+LG     D  +P  + G +    ++EV+ G  H A +T+  KVYTWG+G  G+LGH 
Sbjct: 231 FGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHI 288

Query: 556 --GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G + +  SP LV+ L       + CG + T +I
Sbjct: 289 YNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVI 323



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 134/255 (52%), Gaps = 24/255 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ VE  +   V  ++CG+ H   +T   + ++WG    GRLGHG   DV  P+LIE L+
Sbjct: 141 PQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLA 200

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G++V+ + CG +HT  +  +G +Y  G G +  G LG GSK   +IP+ + G+L    + 
Sbjct: 201 GLSVKNIVCGGHHTAILLNNGKVYFCGGGAF--GKLGFGSKEDIYIPKLLQGSLTNKSIK 258

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGH---GDHISTSIPREVETLRGLRTTRVSCG 411
            +S G  H+AV+T+ G ++T+G G  G LGH   G       P+ VE L  +    +SCG
Sbjct: 259 EVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCG 316

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI-DEN 470
             HT  +              ++ G ++ WG      LGHG  + +     + P++ ++N
Sbjct: 317 HSHTVVI--------------SNIGDVYAWGVTR--NLGHGVIDSKPNDPTLHPILQNKN 360

Query: 471 ICQVACGHDLSVALT 485
           I QV+CG   ++AL+
Sbjct: 361 IVQVSCGKTHTIALS 375



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 26/286 (9%)

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A  +SG +  WG   Y  G LG   + S   P+ +        +  + CG  H+AV+T +
Sbjct: 4   APVKSG-VVAWGSSEY--GQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHS 60

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G L  +G G  G LG GD     IPR + +++      VSC   H+AA++          
Sbjct: 61  GELIVWGYGGCGQLGLGDLKDIVIPRVMTSIK--NVINVSCSDRHSAAIL---------- 108

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLF------PECVAPLIDENICQVACGHDLSVA 483
                 G+L+TWG    G+LG G     L       P+ V  L++E + +V+CG   +  
Sbjct: 109 ----EDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTAC 164

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           LT     YT G    G+LG    + +   ++   +A   V+ + CG +H A L +  KVY
Sbjct: 165 LTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVY 224

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVD-FLKDKQVKRVVCGLNFTAII 588
             G GA G+LG G K++   P L+   L +K +K V  G   +A+I
Sbjct: 225 FCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVI 270


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 188/381 (49%), Gaps = 39/381 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLTTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-V 542
           LT +G V+T G+ + GQLG    +  V  R   E+  S V ++ACG  H  A   +S  +
Sbjct: 257 LTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTAI 587
           Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T +
Sbjct: 317 YAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRFKYHIVKQIFSGGDQTFV 376

Query: 588 IC--LHKWVSSVDHSVCSSCH 606
           +C     +  +VD    +  H
Sbjct: 377 LCSKYENYSPAVDFRTMNQAH 397



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 159/325 (48%), Gaps = 31/325 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V     +  V  ++CG  H A LT    V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++  +P  V  L   +V ++ CG
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACG 302



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 18/270 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG     D V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +       +   +L+GI L
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + Q
Sbjct: 253 HTAVL--------------TKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           +ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG         G + ++G + +  + A+ P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWG--------AGSDGQLGLTTTEDSVAV-PRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMN--NAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T  G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T++G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 189/379 (49%), Gaps = 38/379 (10%)

Query: 214 FLGGGEHRVGYS---FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGE 270
           F G  +  +G+    +    + + P   E    L V  IAC  +  +++++ G +++   
Sbjct: 461 FQGSLQEVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT--- 517

Query: 271 ESGGRLGHGREADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSG 328
                      +D   PQL++ L+  N+  +A     +H  A+  +G++Y+WG G  + G
Sbjct: 518 -------QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGG 568

Query: 329 LLGHGSKVSCWIPRKVS---GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
            LGHG  V    P+ +S   G   G H+ +I+CG  ++A +T+ G L+T+G G++G LGH
Sbjct: 569 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 628

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
           G     +IP  V  L+GL+   V+CG    A  +  TD+           G++++WGDGD
Sbjct: 629 GSSEDEAIPMLVAGLKGLKVIDVACGS-GDAQTLAVTDN-----------GQVWSWGDGD 676

Query: 446 KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
            G+LG G  +    P+ +  L D ++ +V CG   S+ALT  G VY+ G     +LG   
Sbjct: 677 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 736

Query: 506 ADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD--KDNRN 562
            + +  P  ++G   +  ++ VA G+ H  ALT  S+V++W  G+N Q  H D  +  + 
Sbjct: 737 EEHVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKP 793

Query: 563 SPTLVDFLKDKQVKRVVCG 581
            P  +  L  K +  + CG
Sbjct: 794 EPAALPGLDTKHIVGIACG 812



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 44/345 (12%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P   E L+ + V  +AC E     ++R+G +YT    
Sbjct: 467 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 518

Query: 324 TYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YNS  L          P+ V G  + + + ++  S G  H   + + G ++++G G  G
Sbjct: 519 AYNSDTLA---------PQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 568

Query: 382 ALGHGDHISTSIPREVETLRGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            LGHGD +    P+ +    G +  +    ++CG  ++AA+              T+ G+
Sbjct: 569 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------------TAEGE 614

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMGS 495
           L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G 
Sbjct: 615 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGD 674

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LGH
Sbjct: 675 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 734

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           G +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 735 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 779



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 29/306 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+V+ WG G   G LG G+     +   +   ++          
Sbjct: 541 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGD-----TVPLEEPKVISAFSGKQAGK 594

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  VAC 
Sbjct: 595 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 654

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ +   L  + +  + CG   
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 711

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 712 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL---- 767

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 768 ----------TEDSEVHSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGIACGPAQ 815

Query: 481 SVALTT 486
           S A ++
Sbjct: 816 SFAWSS 821


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 19/339 (5%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLI 290
            ++P+ ++   A ++   ACGA H +L+T  G+++S G    G+LGH  E+     PQL+
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             L    +    CG  H+ A+T  G +Y+WG      G LG  +  +  I  ++  ++  
Sbjct: 395 TALENYIITQACCGTAHSLALTNWGQVYSWGSNA--VGQLGQETDTTRQIIPRLIRSIAA 452

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVS 409
             +  I+ G +H   +T++G L+ +G  ++G LG G  +   S P  V++L G+    ++
Sbjct: 453 KQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIA 512

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+ AV              +  G +F WG    G+LG  D   R FP  +  L   
Sbjct: 513 CGGNHSFAV--------------SKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSL 558

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  V+CG D SV LT  G V+T G+  +GQLG    +  +  R+  E+  S + ++ACG
Sbjct: 559 GVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACG 618

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   S  K+Y +G    GQLG G   N N+P +V
Sbjct: 619 RRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIV 657



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 27/271 (9%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           +++ +  G+AH     + G V+ WG   A G LG          +  T  ++P+ + S  
Sbjct: 401 IITQACCGTAHSLALTNWGQVYSWGSN-AVGQLGQE--------TDTTRQIIPRLIRSIA 451

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELV 301
           A  V  IA G  H + +T  GE+++WG  + G+LG G   + VS P L++ L+GV +  +
Sbjct: 452 AKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFI 511

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACG  H+ AV++SG ++ WG  T+  G LG     S   P ++   L  + + Y+SCG  
Sbjct: 512 ACGGNHSFAVSKSGAIFGWGKNTF--GQLGLNDLNSRQFPTQLR-TLRSLGVRYVSCGDD 568

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +  +T+ G +FT G G+FG LGHG   +  +PR V  L G + T+++CG  HT A V  
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFV-- 626

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                       S GK++ +G    G+LG G
Sbjct: 627 -----------PSRGKIYGFGLSGVGQLGIG 646



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 133/262 (50%), Gaps = 26/262 (9%)

Query: 334 SKVSCWIPRKVSGNLDGIHLSYIS---CGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHI 389
           +KV   +PRK    +D +H   I+   CG  HT ++T+ G +++ G+   G LGH  + +
Sbjct: 331 AKVMVMVPRK----MDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESL 386

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
               P+ +  L     T+  CG  H+ A+              T+ G++++WG    G+L
Sbjct: 387 PNKRPQLLTALENYIITQACCGTAHSLAL--------------TNWGQVYSWGSNAVGQL 432

Query: 450 GH-GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG 508
           G   D   ++ P  +  +  + + Q+A GH   +ALT SG +Y  GS AYGQLG+ + + 
Sbjct: 433 GQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNE 492

Query: 509 LV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
            V  PT V   +A   +  +ACG  H  A++ +  ++ WGK   GQLG  D ++R  PT 
Sbjct: 493 KVSTPTLVQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQ 551

Query: 567 VDFLKDKQVKRVVCGLNFTAII 588
           +  L+   V+ V CG +F+  +
Sbjct: 552 LRTLRSLGVRYVSCGDDFSVFL 573



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 156/353 (44%), Gaps = 43/353 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P      M +D  N+ CG         QGE+F              +  V  P+ ++ + 
Sbjct: 303 PVGTNGHMTVDGENVECGP-------IQGEVFP----------SLAKVMVMVPRKMDWMH 345

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +   ACG  HT  +T  G +Y+ G+   + G LGH  +    +P K    L  +   
Sbjct: 346 AKEIARAACGASHTLLLTNDGKMYSCGNN--DHGQLGHDVES---LPNKRPQLLTALENY 400

Query: 355 YIS---CGLWHTAVVTSAGHLFTFGDGSFGALGH-GDHISTSIPREVETLRGLRTTRVSC 410
            I+   CG  H+  +T+ G ++++G  + G LG   D     IPR + ++   +  +++ 
Sbjct: 401 IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAA 460

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDE 469
           G +H  A+              T+ G+L+ WG    G+LG G    ++  P  V  L   
Sbjct: 461 GHYHCLAL--------------TNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV 506

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVAC 528
            I  +ACG + S A++ SG ++  G   +GQLG+  +     PT++   +    V  V+C
Sbjct: 507 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLR-TLRSLGVRYVSC 565

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G      LT+   V+T G G  GQLGHG  +N   P +V  L   ++ ++ CG
Sbjct: 566 GDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACG 618


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V+ IACG RH + +T  G++++ G     +LGH  E     P  I  L    +  +ACG 
Sbjct: 38  VNQIACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGS 95

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A++  G +++WGD     G LGH S        K+  NL    +  I+CG  H+  
Sbjct: 96  RHSMALSEWGQVFSWGDN--ECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLA 153

Query: 366 VTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +T  G L+++G   +G LG     D   ++ P  + TL G+  + ++CG  H+  +    
Sbjct: 154 LTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLI---- 209

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S SS+         +F WG  + G+LG  D+  R +P  +  L    +  VACG + SV
Sbjct: 210 -SKSSA---------VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSK 541
            LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG  H  AL  S  +
Sbjct: 260 FLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGR 319

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           +Y +G G++GQLG  +  + N P LV
Sbjct: 320 IYGFGLGSSGQLGTRNTKSLNLPQLV 345



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 143/280 (51%), Gaps = 23/280 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG+ ++    LG   +     P ++    D   ++ I+CG  HT  +T++G ++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSA-VNQIACGHRHTLFLTASGKVYAC 60

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P ++  L+    T+++CG  H+ A+              +  
Sbjct: 61  GSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMAL--------------SEW 104

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++F+WGD + G+LGH  D++    P+ V  L+ + + Q+ACG + S+ALT  G +Y+ G
Sbjct: 105 GQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWG 164

Query: 495 SAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV   + L     P R+   +    V  +ACG  H   ++ +S V+ WG+   
Sbjct: 165 SNLYGQLGVSSPNDLQQSNTPMRLTTLLGIP-VSAIACGGNHSFLISKSSAVFGWGRNNC 223

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  + +
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTI 263


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 168/327 (51%), Gaps = 31/327 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +++WG    G+ G GR+ + + P+ ++ L G +V   A G Y++  VTR G+LYT   G+
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYT--TGS 96

Query: 325 YNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            ++  LG   +     P +VS   ++ +H   ++CG  H   V   GHL  +G   +G L
Sbjct: 97  NDARQLGVKGREVALEPIRVSALEMNNVH--GVACGQGHMLAVVDNGHLAAWGSNEYGQL 154

Query: 384 GHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G G+   S + PR ++ +RG    RV+ G  H+ A+              TS G+++++G
Sbjct: 155 GTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLAL--------------TSSGQVYSFG 200

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           +G  G LGHGD   R  P  V  L  E I  +A G   S A++ SG V+T G   YGQLG
Sbjct: 201 EGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLG 260

Query: 503 -VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
                +  +P  V G I ++   +VACG +H  ALT   +VYTWG  ++GQLG G     
Sbjct: 261 NGEFGNAFLPQPVPG-IEQAV--QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGS 317

Query: 562 N-------SPTLVDFLKDKQVKRVVCG 581
                   SP+ VD L D+ +++V  G
Sbjct: 318 EALNGCLCSPSRVDSLADQSIRQVSAG 344



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 204/429 (47%), Gaps = 43/429 (10%)

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSH 286
           R  ++  P+ V++    DV + A G+ ++  VT+ GE+++ G     +LG  GRE  +  
Sbjct: 54  RDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVAL-E 112

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           P  +  L   NV  VACG+ H  AV  +G L  WG   Y  G LG G   +     +V  
Sbjct: 113 PIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEY--GQLGTGEVGASAAQPRVLK 170

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            + G H + ++ G  H+  +TS+G +++FG+GSFGALGHGD  + + P  V+ L      
Sbjct: 171 RIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIV 230

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            ++ G + +AAV ++              G++FTWG    G+LG+G+      P+ V P 
Sbjct: 231 SIAAGEYFSAAVSLS--------------GRVFTWGRNKYGQLGNGEFGNAFLPQPV-PG 275

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ------LGVPVADGLV--PTRVDGEI 518
           I++ + QVACG    +ALT  G VYT G  + GQ      LG    +G +  P+RVD  +
Sbjct: 276 IEQAV-QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVD-SL 333

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGAN--GQLGHGDKDNRNSPTLVDFLKDKQVK 576
           A+  + +V+ GA H   ++   ++  WG GAN  GQL      +   PT V  L    ++
Sbjct: 334 ADQSIRQVSAGARHSFFVSPGEQL--WGAGANDEGQLALQSVPSVALPTRVPGLPGLPMR 391

Query: 577 RVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLK 636
             V   + +        ++ +D S  S   N    RR    C +C +            +
Sbjct: 392 FAVAAGDHS--------IAVLDES--SGLQNGGLQRRTSGPCRSCMMTLQMPPDLLHYAE 441

Query: 637 AALAPSINK 645
           AA  PS  +
Sbjct: 442 AATGPSATR 450



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 109/220 (49%), Gaps = 15/220 (6%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+T+G    G  G G   +++ P  V+ L+G      + G +++A V             
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFV------------- 85

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G+L+T G  D  +LG   +E  L P  V+ L   N+  VACG    +A+  +GH+ 
Sbjct: 86  -TRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLA 144

Query: 492 TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
             GS  YGQLG   V       RV   I  +    VA GA H  ALTS+ +VY++G+G+ 
Sbjct: 145 AWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSF 204

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           G LGHGD +NR  PTLV  L  + +  +  G  F+A + L
Sbjct: 205 GALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSL 244



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 21/222 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +  WG     G LG GE  VG S ++      P+ ++         +A GA H++ +T
Sbjct: 141 GHLAAWGSN-EYGQLGTGE--VGASAAQ------PRVLKRIRGAHFARVAAGATHSLALT 191

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G+++S+GE S G LGHG   + + P L++ L    +  +A GEY + AV+ SG ++TW
Sbjct: 192 SSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTW 251

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G   Y  G LG+G   + ++P+ V G    +    ++CG  H   +T  G ++T+G  S 
Sbjct: 252 GRNKY--GQLGNGEFGNAFLPQPVPGIEQAVQ---VACGDHHCIALTRWGEVYTWGLHSS 306

Query: 381 GALGHGDHISTSI-------PREVETLRGLRTTRVSCGVWHT 415
           G LG G ++ +         P  V++L      +VS G  H+
Sbjct: 307 GQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHS 348


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 31/327 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +  GA H  ++++ G++F+WGE   GRLGHG E  +S P+ +  L+ + ++ V CG   T
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 309 CAVTRSG--DLYTWGDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGI-HLSYISCGLWH 362
            A++ +    LYTWG+  +  G LG    G   +C +P  V+  + G   L  +  G   
Sbjct: 194 IALSHTAGSGLYTWGNNEF--GQLGRGDCGDDFTC-LPESVA--VPGAKRLVALDAGASR 248

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            AV+ S+G LFT+G G  G LGHGD  +   P  V +L G     V+ G  H+ A+    
Sbjct: 249 AAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLAL---- 304

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLID-ENICQVACGHDL 480
                     T  G+LF+WG G+ G+LGHG  +  +L P+ +   +D   I  ++ G   
Sbjct: 305 ----------TKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYH 354

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALT 537
           SVA    G VY  G + YG LG   +D     +P R+       F + ++CG  H  ALT
Sbjct: 355 SVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRF-KTISCGFQHTVALT 413

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSP 564
           S + +Y+WG G  G+LG  ++ N+ +P
Sbjct: 414 SDNTIYSWGCGLGGRLGTFNEKNQCAP 440



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 125/279 (44%), Gaps = 46/279 (16%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG---- 411
           ++ G  H A+++ +G LFT+G+G +G LGHGD  S S P++V  L  +    V CG    
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 412 --VWHTA-------------------------------AV-----VVATDSSSSSPSGST 433
             + HTA                               AV     +VA D+ +S  +   
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVID 253

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S G LFTWG GD GRLGHGD E R  P  V+ L    +  VA G   S+ALT +G +++ 
Sbjct: 254 SSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSW 313

Query: 494 GSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
           G    GQL  G   +  L P ++   +    +  ++ G YH  A      VY WG    G
Sbjct: 314 GRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYG 373

Query: 552 QLGHGDKDN--RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            LG GD D+   N P  +   +  + K + CG   T  +
Sbjct: 374 ILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVAL 412



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 141/296 (47%), Gaps = 34/296 (11%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG     G LG G+   G  F+      LP++V    A  +  +  GA  A ++   
Sbjct: 204 LYTWGNN-EFGQLGRGD--CGDDFT-----CLPESVAVPGAKRLVALDAGASRAAVIDSS 255

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G +F+WG    GRLGHG   +   P L+  L G  V  VA G  H+ A+T++G+L++WG 
Sbjct: 256 GALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGR 315

Query: 323 GTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           G   +G LGHGS  S  + P+++   +D   +  IS G +H+      G ++ +G   +G
Sbjct: 316 G--ENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYG 373

Query: 382 ALGHGDHI--STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            LG GD    + +IP+ +   RG+R   +SCG  HT A+              TS   ++
Sbjct: 374 ILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVAL--------------TSDNTIY 419

Query: 440 TWGDGDKGRLGHGDKEPRLFP-ECVAPLIDE------NICQVACGHDLSVALTTSG 488
           +WG G  GRLG  +++ +  P  C  P           I  +  G   +V  T+SG
Sbjct: 420 SWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 186/385 (48%), Gaps = 37/385 (9%)

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           G S + Q   L P+         V  +ACG  H++ + + GE+++ G  + G+LGH +E 
Sbjct: 72  GTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEG 131

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIP 341
             S P+ I  L+  ++  VACGE H+ A++  G L++WG G+   G LG   ++ S  +P
Sbjct: 132 --SKPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGS--DGQLGLTTTEDSVAVP 187

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETL 400
           R +   L+   +  +SCG WH   + + G  F +G  S G LG G    S + P+ V++L
Sbjct: 188 RLIK-KLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL 246

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
            G+   +V+ G  H+ A+ ++              G +F WG    G+LG  D++ R  P
Sbjct: 247 DGIPLAQVAAGGAHSFALSLS--------------GAVFGWGKNTSGQLGLSDEQDRESP 292

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
             V  L  + +  ++CG D +  LT +G V+T G+ + GQLG    +  V  R   E+  
Sbjct: 293 CHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMG 352

Query: 521 SFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLV------------ 567
           S V ++ACG  H  A   +S  +Y +G G  GQLG G   N   P+ V            
Sbjct: 353 SEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVS 412

Query: 568 ---DFLKDKQVKRVVCGLNFTAIIC 589
              D  K   VK +  G + T ++C
Sbjct: 413 RRADACKHYVVKHIFSGGDQTFVLC 437


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/284 (39%), Positives = 151/284 (53%), Gaps = 25/284 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNV-ELVACGEYHTCAVTRSGDLYTWGDG 323
           +FSWG    G+LG G  +D   P  ++ L GV +   V CG YHT AV  +GDLYTWG G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            Y  G LGHG++     PR+V   L G+ +  I+CG  HTAVVTS G L+T+GD   G  
Sbjct: 61  MY--GKLGHGNESGHSTPRRVEA-LVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 384 GHGD---HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           GHGD   H  T  P+ +E L G +  ++S   +HTA +   TD   +           F 
Sbjct: 118 GHGDTEGHQYT--PKLLERLNGKKVVQLSACGFHTACL---TDDHET-----------FA 161

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG+G  GRLG+G +     P  +  LI +  CQVACG   S  +T  G +YT G   +GQ
Sbjct: 162 WGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQ 221

Query: 501 LG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           LG     + L PT V+  +    V+++ CG  H  ALTS  + +
Sbjct: 222 LGHADKVNKLKPTLVE-ALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 142/275 (51%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL-SYISCGLWHTAVVTSAGHLFTF 375
           +++WG G    G LG G       P  V   L G+ + ++++CG +HTA V S G L+T+
Sbjct: 1   VFSWGRG--EDGQLGIGDTSDQDEPTYVDA-LRGVGIITHVTCGSYHTAAVASNGDLYTW 57

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G G +G LGHG+    S PR VE L GL    ++CG  HTA V              TS 
Sbjct: 58  GGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVV--------------TSK 103

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQV-ACGHDLSVALTTSGHVYTM 493
           G L+TWGD + G  GHGD E   + P+ +  L  + + Q+ ACG   +  LT     +  
Sbjct: 104 GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFH-TACLTDDHETFAW 162

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           G   +G+LG          R+   +   +  +VACG +H A +T   K+YT+G G +GQL
Sbjct: 163 GEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GH DK N+  PTLV+ L    VK++ CG + +  +
Sbjct: 223 GHADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 27/292 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDV-HNIACGARHAVLVTK 261
           VF WG G  +G LG G+          +D   P  V++   + +  ++ CG+ H   V  
Sbjct: 1   VFSWGRG-EDGQLGIGD---------TSDQDEPTYVDALRGVGIITHVTCGSYHTAAVAS 50

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G++++WG    G+LGHG E+  S P+ +E L G+++  +ACG  HT  VT  G LYTWG
Sbjct: 51  NGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWG 110

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           D    +G+ GHG         K+   L+G  +  +S   +HTA +T     F +G+G FG
Sbjct: 111 D--KENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFG 168

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LG+G   +   PR +E+L G    +V+CG +H+A +              T  GK++T+
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVI--------------TRDGKMYTF 214

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           G G+ G+LGH DK  +L P  V  L    + Q+ CG   SVALT+ G  + +
Sbjct: 215 GGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 490 VYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           V++ G    GQLG+   +D   PT VD       +  V CG+YH AA+ S   +YTWG G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
             G+LGHG++   ++P  V+ L    +  + CG   TA++    CL+ W
Sbjct: 61  MYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 168/336 (50%), Gaps = 22/336 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+  +  +  +V ++ CG RH   V   G +++ G    G+LGH +      P+ +  L 
Sbjct: 25  PRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSR--KKPEQVGALD 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHL 353
              +  V+CGE HT A+   G +++WG   +  G +G   ++    +PR +  +L  I +
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPRNIK-SLSDIQI 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGV 412
             ++CG  H+  ++   +++++G   +G LG G +    S PR +++L G+    ++ G 
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG    G+LG  D+  R  P  +  L  + I 
Sbjct: 200 GHSFALTIS--------------GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            + CG D + ALT  G V+T G+  YGQLG   A   V  R   E+  + V ++ACG  H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQH 305

Query: 533 VAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
             A   +S ++Y++G G NGQLG G   N+ SP++V
Sbjct: 306 TLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 27/284 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + ++ + S G AH    +  G VF WG   A+G       ++G S +      +P+ ++S
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHA-AHG-------QIGVSIAEDY-IRVPRNIKS 133

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVE 299
              + +  +ACG  H++ ++K+  I+SWG+   G+LG G E    S P+ I+ LSG+   
Sbjct: 134 LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFA 193

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G  H+ A+T SG ++ WG   +  G LG   +     P  +  +L    + YI CG
Sbjct: 194 HIAAGGGHSFALTISGAIFGWGRNKF--GQLGLNDETDRSDPALLK-SLRSQKIIYICCG 250

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT A V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFV 310

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                         S G+++++G G  G+LG G    +  P  V
Sbjct: 311 -------------PSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 150/331 (45%), Gaps = 35/331 (10%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +     NV  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH    S   P +V G LD   +  +SCG  HT  +   G +F++G  + G 
Sbjct: 60  -CNDLGQLGHDK--SRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 383 LGHG---DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G     D+I   +PR +++L  ++  +V+CG  H+ A+     S  S+         ++
Sbjct: 116 IGVSIAEDYIR--VPRNIKSLSDIQIVQVACGHHHSLAL-----SKESN---------IY 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G +K     P  +  L       +A G   S ALT SG ++  G   +
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 499 GQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           GQLG+         R D  + +S     +  + CG  H AALT    V+T+G G  GQLG
Sbjct: 220 GQLGLNDET----DRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           H    +  +P  V  L    V ++ CG   T
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHT 306



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PR+    ++  ++  + CG  HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK-NVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHDK--SRKKPEQVGALDAQIIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG    G++G    E  +  P  +  L D  I QVACGH  S+AL+   ++Y+ G 
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +       F   +A G  H  ALT +  ++ WG+   GQL
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAH-IAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+ +R+ P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 191/427 (44%), Gaps = 56/427 (13%)

Query: 186 SSSSHGSAHEDFDS-LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMA 243
           S  +H  A  + D     VF+WG               G+S    T++LL P+ V+    
Sbjct: 195 SDGTHDIASMELDQKCARVFLWGRP------------PGWS---HTNSLLTPQKVDVLPG 239

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN------ 297
             +  IACG  H + ++  G+++S   E            +  PQL++ L+         
Sbjct: 240 QSIAEIACGGNHILYLSSAGDVYS--SEDHAISTTEPTNMLQTPQLVKELTLEKALHRRP 297

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           +  +ACG  H+ A+T +G++Y+WG G    G LGHG      +PRK+   L    + Y+S
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSG--EDGRLGHGEMRDRNVPRKIMALLRH-RIEYVS 354

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET--LRGLRTTRVSCGVWHT 415
           CG  HTAVV+    +FTFG G  G LG GD      P+EV T   R  R  +V CG   T
Sbjct: 355 CGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFT 414

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQV 474
            A+ +               G++F+WG   +G+ G G   +  L P  +  L+D  I  V
Sbjct: 415 IALSLE--------------GRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDV 460

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE---SFVEEVACGAY 531
           ACG+  S+ALT+   V + G   YGQLG  +     P  +D  +        + + CGA+
Sbjct: 461 ACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAF 520

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           H      +  +Y WG  + G  G G   NR+ P   DF  +     V+C        C H
Sbjct: 521 HSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLC--------CGH 572

Query: 592 KWVSSVD 598
           K+  +++
Sbjct: 573 KYTIALE 579



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           C ++F WG       G       L P+ V  L  ++I ++ACG +  + L+++G VY+  
Sbjct: 210 CARVFLWGRPP----GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYSSE 265

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVE-----EVACGAYHVAALTSTSKVYTWGKGA 549
             A      P      P  V     E  +       +ACGA H  ALTS  +VY+WG G 
Sbjct: 266 DHAISTTE-PTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGE 324

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVC------- 602
           +G+LGHG+  +RN P  +  L   +++ V CG + TA++     V +             
Sbjct: 325 DGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGD 384

Query: 603 SSCHN------PFGFRRKRHNCYNCGLVFCKACS 630
           + CH+       +GFR++R     CG  F  A S
Sbjct: 385 TKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALS 418


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 189/389 (48%), Gaps = 31/389 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+  +  +  +V ++ CG RH   V   G +++ G    G+LGH +      P+ +  L 
Sbjct: 25  PRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSR--KKPEQVGALD 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHL 353
              +  V+CGE HT A+   G +++WG   +  G +G   ++    +PR +  +L  I +
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPRNIK-SLSDIQI 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGV 412
             ++CG  H+  ++   +++++G   +G LG G +    S PR +++L G+    ++ G 
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG    G+LG  D+  R  P  +  L  + I 
Sbjct: 200 GHSFALTIS--------------GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
            + CG D + ALT  G V+T G+  YGQLG   A   V  R   E+  + V ++ACG  H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQH 305

Query: 533 -VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCGLNFTAIIC 589
            +A + S+ ++Y++G G NGQLG G   N+ SP++V  ++L  +   R +   N     C
Sbjct: 306 TLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEAN--GCYC 363

Query: 590 LHKWVSSVDHSVC-----SSCHNPFGFRR 613
           + +  S  D S        +C  P  FR+
Sbjct: 364 VKRIYSGGDQSFAHYFTIQNCLPPDDFRK 392



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 27/284 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + ++ + S G AH    +  G VF WG   A+G       ++G S +      +P+ ++S
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHA-AHG-------QIGVSIAEDY-IRVPRNIKS 133

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVE 299
              + +  +ACG  H++ ++K+  I+SWG+   G+LG G E    S P+ I+ LSG+   
Sbjct: 134 LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFA 193

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G  H+ A+T SG ++ WG   +  G LG   +     P  +  +L    + YI CG
Sbjct: 194 HIAAGGGHSFALTISGAIFGWGRNKF--GQLGLNDETDRSDPALLK-SLRSQKIIYICCG 250

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HTA +T  G +FTFG G +G LGH        PR+V  L G   T+++CG  HT A V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFV 310

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                         S G+++++G G  G+LG G    +  P  V
Sbjct: 311 -------------PSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 148/331 (44%), Gaps = 35/331 (10%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +     NV  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH        P +V G LD   +  +SCG  HT  +   G +F++G  + G 
Sbjct: 60  -CNDLGQLGHDKSRK--KPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 383 LGHG---DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G     D+I   +PR +++L  ++  +V+CG  H+ A+   ++              ++
Sbjct: 116 IGVSIAEDYIR--VPRNIKSLSDIQIVQVACGHHHSLALSKESN--------------IY 159

Query: 440 TWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G +K     P  +  L       +A G   S ALT SG ++  G   +
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 499 GQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           GQLG+         R D  + +S     +  + CG  H AALT    V+T+G G  GQLG
Sbjct: 220 GQLGLNDET----DRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           H    +  +P  V  L    V ++ CG   T
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHT 306



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PR+    ++  ++  + CG  HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK-NVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHDK--SRKKPEQVGALDAQIIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG    G++G    E  +  P  +  L D  I QVACGH  S+AL+   ++Y+ G 
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQ 163

Query: 496 AAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             YGQLG+         P  +       F   +A G  H  ALT +  ++ WG+   GQL
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAH-IAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D+ +R+ P L+  L+ +++  + CG + TA +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +++ WG+    G LG G  +      R+  A  P+ ++S   +   +IA G  H+  +T 
Sbjct: 157 NIYSWGQN-QYGQLGLGSEK------RKESA--PRHIKSLSGIPFAHIAAGGGHSFALTI 207

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D S P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG G  
Sbjct: 268 AGGY--GQLGHNSASHEVNPRKVF-ELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324

Query: 381 GALGHGDHISTSIPREVE 398
           G LG G   +   P  V+
Sbjct: 325 GQLGIGSTSNKKSPSMVK 342


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 185/363 (50%), Gaps = 39/363 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+   G LG   ++ S  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   + D + P RV  E+  S V ++ACG  H  A   +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV---------------DFLKDKQVKRVVCGLNFTA 586
           +Y +G GA GQLG G   N   P+ V               D  K   VK++  G + T 
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTF 375

Query: 587 IIC 589
           ++C
Sbjct: 376 VLC 378



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 161/329 (48%), Gaps = 31/329 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A  +A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA--LAAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V   +    V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++  +P  V  L   +V ++ CG   T
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHT 306



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 20/271 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIH 352
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +  S   P++V  +L+GI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVR-SLEGIP 191

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           L+ ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + 
Sbjct: 252 EHTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297

Query: 473 QVACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           Q+ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 125/253 (49%), Gaps = 26/253 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG G ++G LG          + +    +P+ ++      +  ++CG  H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA G  H+ A++ SG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG    N+G LG   +     P  V   L    + YISCG  HTAV+T +G +FTFG GS
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LGH        PR V  L G   T+++CG  HT A V              S G ++
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-------------PSSGLIY 317

Query: 440 TWGDGDKGRLGHG 452
            +G G +G+LG G
Sbjct: 318 AFGCGARGQLGTG 330



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 187/397 (47%), Gaps = 59/397 (14%)

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           GE  +G +  R T    P   +++   D+  +  G     ++T  GE++S G  S G+ G
Sbjct: 22  GELGLGDTLERHT----PTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCG 77

Query: 278 HGREADVSHPQLIEILSGVN-----------VELV--ACGEYHTCAVTRSGDLYTWGDGT 324
            G E D + P+++  L+ V            V LV    G  H   VT  G+L T G   
Sbjct: 78  IG-EIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRN- 135

Query: 325 YNSGLLGHGSKVSCW-IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            NSG LGHG     + +PR V+G   G  ++ ++C   HT VVT     +TFG   +G L
Sbjct: 136 -NSGQLGHGEVGKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQL 193

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           GHGDH S S P  +   +GL    V+CGV+HT                S + G L+++G 
Sbjct: 194 GHGDHSSRSAPAALACFQGLGVLSVACGVYHTVV--------------SVASGGLYSFGK 239

Query: 444 GDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVACGHDLSVALTTSGHVYTMGSAAY 498
            D G+LG    E R  P      +    C     Q+ACG+  +VAL+ +G V   G   Y
Sbjct: 240 NDHGQLGLEGGESRFTP------VQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDY 293

Query: 499 GQLGVPVAD-----GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           GQLG+   +     G VP     ++A   + +VACG+YH  +L    +VY +G+  +GQL
Sbjct: 294 GQLGLGHRESTWQGGQVP-----DLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQL 348

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           G G +++   P  V+ L    V +V  G  F   +CL
Sbjct: 349 GTGTREDACRPCFVEGLSQSFVCQVAAG--FYHTLCL 383



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 129/275 (46%), Gaps = 28/275 (10%)

Query: 212 NGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEE 271
           +G LG GE   GYS        LP+ V       V  +AC   H V+VT     +++G  
Sbjct: 137 SGQLGHGEVGKGYS--------LPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGN 188

Query: 272 SGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLL 330
             G+LGHG  +  S P  +    G+ V  VACG YHT     SG LY++G   +   GL 
Sbjct: 189 GYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLE 248

Query: 331 GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           G  S+ +    R  +  ++      ++CG +HT  ++ AG +  FG   +G LG G   S
Sbjct: 249 GGESRFTPVQHRACTSVVE-----QLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRES 303

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
           T    +V  L GLR  +V+CG +HT    ++ D            G+++ +G  + G+LG
Sbjct: 304 TWQGGQVPDLAGLRIIQVACGSYHT----ISLDDE----------GRVYPFGRNNHGQLG 349

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
            G +E    P  V  L    +CQVA G   ++ LT
Sbjct: 350 TGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCLT 384



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           +L+ +G    G LG GD   R  P        ++I  V  G++L+  LT +G VY+ G  
Sbjct: 12  ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71

Query: 497 AYGQLGVPVADGLVPTRVDGEIAESFVE------------EVACGAYHVAALTSTSKVYT 544
           + GQ G+   D  VP  V      +  E                G+ H+  +T   ++ T
Sbjct: 72  SEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQT 131

Query: 545 WGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
            G+  +GQLGHG+     S P  V      +V +V C  + T ++
Sbjct: 132 CGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVV 176


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 49/412 (11%)

Query: 188 SSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           + HG    D +    V+ WG G  +G LG          ++  D LLP+ +  T    + 
Sbjct: 2   AEHGETPADEEEEQQVWSWGAG-TDGQLG---------TAKLQDELLPQLLSLTSLPSIS 51

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            +ACG  H + +T  G++F+WG  S G+LGHG   +++ P+L+    G  +   A G  H
Sbjct: 52  MLACGGAHVIALTSDGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSH 111

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           +  V+ SG L+T G+G++  G LGHG  +S   P KVS       +  ++CG+ H+ V+ 
Sbjct: 112 SGFVSDSGCLFTCGNGSF--GQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLL 168

Query: 368 SAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   +  FG G  G LG       S ++P  V  L+ +  TR+S    H+AA+       
Sbjct: 169 AGNQVCGFGSGKRGQLGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAI------- 221

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  ++ G+ F+WG G     G   + P+  P  ++        +VA G + ++ LT
Sbjct: 222 -------SADGQFFSWGRGFCA--GPDVQTPQCLPSSLS------FRKVAVGWNHALLLT 266

Query: 486 TSGHVYTMGSA-----AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
             G V+ +G+         QL +  ++ L+    D +  +  V ++A GA H AA+T   
Sbjct: 267 VDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVSDFDGVK--VLQIAAGAEHSAAVTENG 324

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDF----LKDKQVKRVVCGLNFTAII 588
           KV TWG G +GQLG G+ +++ SP LV      L+ K++K V CG  FT  +
Sbjct: 325 KVKTWGWGEHGQLGLGNTNDQTSPQLVSVGSIDLRTKEIK-VYCGSGFTYAV 375


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 197/454 (43%), Gaps = 53/454 (11%)

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGI-ANGFLGG 217
           L  A P      S    T  +  SS  S  S  SA    +  GD  +W  G  + G LG 
Sbjct: 389 LDRAKPSAPTRASRGKPTASLFQSSRASGDSTSSAFVGDEEEGDREVWSCGQNSYGELGH 448

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           G+     SF R         +ES    ++  I  G  H + +T  G++ + G    G+ G
Sbjct: 449 GDTASRKSFER---------IESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYNDNGQCG 499

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEY----HTCAVTRSGDLYTWGDGTYN-SGLLGH 332
            G  A VSH  L E+    +  +     Y    HT  VT  G   T G   YN  G LGH
Sbjct: 500 QGGTARVSH--LCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCG---YNYRGQLGH 554

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV-----TSAGHLFTFGDGSFGALGHGD 387
           G+  S  +P K+  +L+   +  +SC  +HT +      +   +L+TFG   +G LGH D
Sbjct: 555 GNTASESVP-KIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHND 613

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
            I   +P+ VE +       V+CG +HT  V              T+ GK F +G  D G
Sbjct: 614 SIDRKVPQHVEAMGDQHVVSVACGQYHTMVV--------------TATGKAFAFGKNDYG 659

Query: 448 RLGHGDKEPRLFPECVAPLIDENIC-QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           +LG    E +L P  V   ++++ C ++ CG+  ++ L +  H++  G   YGQLG+  A
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 507 DG------------LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           +                 R+  E+    +   ACG YH  A++    +Y +G+  +GQLG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            GD + R  P  +D    K+V  V  G   T ++
Sbjct: 780 TGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVL 813



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 33/269 (12%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTK-----QGEIFSWGEESGGRLGHGREADVSHPQ 288
           +PK V S     V  ++C   H V+  +     Q  ++++G    G+LGH    D   PQ
Sbjct: 562 VPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQ 621

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            +E +   +V  VACG+YHT  VT +G  + +G   Y  G LG  S  +  +P +V   L
Sbjct: 622 HVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDY--GQLGIDSMENQLVPVQVRAGL 679

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST------------SIPRE 396
           +      I CG +HT V+ S  HLF FG   +G LG G   ++            S  R 
Sbjct: 680 EKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARL 739

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           +E L G    R +CG +HT AV              +  G ++ +G  + G+LG GD   
Sbjct: 740 IEELEGKDIVRFACGCYHTVAV--------------SDNGVMYVFGRNNHGQLGTGDTNE 785

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALT 485
           R++P  +   + + +  VA G   +V LT
Sbjct: 786 RVYPFPIDDFVGKRVALVAAGFYHTVVLT 814



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 423 DSSSSSPSGSTSCGKLFTW--GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           DS+SS+  G    G    W  G    G LGHGD   R   E +  L  + I Q+  G++ 
Sbjct: 418 DSTSSAFVGDEEEGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEH 477

Query: 481 SVALTTSGHVYTMG---SAAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAA 535
           ++ALT  G V T G   +   GQ G      L  +P   D  I++        G  H   
Sbjct: 478 TIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN---GCEHTIL 534

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +T   +  T G    GQLGHG+  + + P +V  L+++ V+ V C    T + C
Sbjct: 535 VTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMAC 588


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 165/339 (48%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P+ +  T    V  +ACG RH + +T  G++++ G     +LGH  +     PQLI  
Sbjct: 29  LTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPQLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    +  ++CG  H+ A++  G + +WGD   + G LGH ++       KV   L    
Sbjct: 87  LQDYVIIQISCGSRHSLALSDWGQVLSWGDN--DCGQLGHATEKEIVQLPKVVRQLVSKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  AL  S  KVY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         PR++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD-TAVQQVACGHRHTLFLTATGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P+ +  L+     ++SCG  H+ A+              +  
Sbjct: 65  GSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLAL--------------SDW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  +KE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV   + L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 149/329 (45%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P+ I       V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K    IP      L    +  ISCG  H+  ++  G + ++GD  
Sbjct: 66  SNDYSQ--LGHDLPTKRPQLIPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  +     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P     C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P ++     ++ V++VACG  H   LT+T 
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPW-TPDTAVQQVACGHRHTLFLTATG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G     QLGH     R  P L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDYSQLGHDLPTKR--PQLIPELQDYVIIQISCG 98



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 311

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G+++++G  S G+LG      +  PQ++
Sbjct: 312 RHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +V+ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 701



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 28/277 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  +  S  L  G++     P+      D      I  G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNS--SHQLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------- 473

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A+T 
Sbjct: 474 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V      S V EV+CG+ H  AL+   + V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCGSSHTIALSKDGRTVWS 585

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G NG+LGHGD +    P +++ L+   +++V  G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P 
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKP- 605

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           KV   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 606 KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   VS G  H  A+              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDVSIGDSHCLAL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           V+ G+ H  A++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 27/370 (7%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           F   G+   G+ +      + P+  ++   L +  I C  R  +++T+ G++F     S 
Sbjct: 441 FYYNGQRVFGWGWFSWIFGVGPQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSS- 499

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGE--YHTCAVTRSGDLYTWGDGTYNSGLLG 331
                    D   PQ +  L    V  +A      H  A+T+  ++Y+WG+G  + G LG
Sbjct: 500 ---------DTQCPQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLG 548

Query: 332 HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           HG   +   P  +   L G  +  + CG  ++A +++ G L+T+G G++G LGHG     
Sbjct: 549 HGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
             P  +  L      +V+CG ++   + +            TS GK+++WGDGD G+LG 
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCI------------TSQGKVYSWGDGDYGKLGR 655

Query: 452 GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
           G  +    P  +  L +  I QV CG   SVAL+  GHVYT G     +LG P  + +  
Sbjct: 656 GGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRF 715

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             +   + +  V  V+ G  HV ALT   +VY WGK  N Q+    +     P L++ LK
Sbjct: 716 PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALK 775

Query: 572 DKQVKRVVCG 581
            ++V  V CG
Sbjct: 776 GQKVVGVCCG 785



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 163/326 (50%), Gaps = 35/326 (10%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           PQ  + LS + ++ + C +     +T++G ++           + + S   C  P++++ 
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF----------FMYYSSDTQC--PQEMTA 509

Query: 347 NLDGIHLSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            LD   +  I+      H   +T    ++++G+G  G LGHGD  +   P  ++ L+G  
Sbjct: 510 -LDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKD 568

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              V CG  ++AA+              ++ G L+TWG G+ GRLGHG  E  L P  ++
Sbjct: 569 IIDVECGGTYSAAI--------------SANGALYTWGRGNYGRLGHGTAEDCLTPTMIS 614

Query: 465 PLIDENICQVACG--HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
            L DE+I +VACG  +  ++ +T+ G VY+ G   YG+LG   +DG    R+  ++    
Sbjct: 615 ALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVK 674

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           + +V CGA    AL+    VYTWGKG   +LGH  ++N   P +V+ L+D++V  V  G+
Sbjct: 675 IVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGV 734

Query: 583 NFTAIIC----LHKWVSSVDHSVCSS 604
           +    +     ++ W  + +  +C S
Sbjct: 735 SHVLALTDQGEVYGWGKNENKQICDS 760



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+G   G+      ++G+    + +   P+ VE      V  ++ G  H + +T
Sbjct: 692 GHVYTWGKG--EGW------KLGHP--TEENVRFPEMVEVLRDRKVVGVSLGVSHVLALT 741

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            QGE++ WG+    ++    E  V  P+LIE L G  V  V CG   + A T
Sbjct: 742 DQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWT 793


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 178/366 (48%), Gaps = 49/366 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEIL-----SGV--------------NVELVACG 304
           E+++WG  + G++GHG E     P LI  L     +G+              NV  V CG
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVG-VTCG 94

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+       D++ WG G  + G LG  ++ + + P  V+  +  + ++  S G  H  
Sbjct: 95  LFHSVLFAEQ-DVFVWGKG--DGGRLGIDTEFNQYKPY-VNPRIKRVQMA--SAGGLHNI 148

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T  G+++T+G G+FGALGHG +    +PR +E     R   VS G  HTAAV      
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV------ 202

Query: 425 SSSSPSGSTSCGKLFTWG-DGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHD 479
                   T  G+L+TWG D  +GRLGHG+     E  L        +D  I  V CG  
Sbjct: 203 --------TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGF 254

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            ++ALT SG +++ G  A  +LG          +V   + +  + +VACG +H AALT  
Sbjct: 255 FTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQD 314

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVS 595
            KV TWG G NGQLGHG  +N   P +V+ + DK    + CG  +TA I     L+ W  
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374

Query: 596 SVDHSV 601
           + D+ +
Sbjct: 375 NRDYQL 380



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 175/356 (49%), Gaps = 36/356 (10%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            + CG  H+VL  +Q ++F WG+  GGRLG   E +   P +   +    V++ + G  H
Sbjct: 90  GVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLH 146

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
             A+T  G++YTWG G +  G LGHGS     +PR + G      + ++S G  HTA VT
Sbjct: 147 NIALTEVGNVYTWGYGAF--GALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVT 203

Query: 368 SAGHLFTFG-DGSFGALGHG-----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +G L+T+G D   G LGHG     D  + S P +V+ L  +    V CG + T A+   
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFFTMAL--- 259

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      T  G+L++WG      LGHG +     P+ VA L D  + QVACG   +
Sbjct: 260 -----------TKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHA 308

Query: 482 VALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            ALT  G V T G    GQLG   + +G  P  V+  +A+     +ACG    AA+T   
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVE-AMADKTCTYIACGPAWTAAITENG 367

Query: 541 KVYTWGKGANGQLG-HGDKDNRNSPTLVDF---LKDK---QVKRVVCGLNFTAIIC 589
            +YTWGK  + QLG  G KD +  P LV F   L +K   +V  V CG N    I 
Sbjct: 368 DLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 169/355 (47%), Gaps = 47/355 (13%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DVF+WG+G       GG   +   F++    + P+     MA      + G  H + +T+
Sbjct: 105 DVFVWGKG------DGGRLGIDTEFNQYKPYVNPRIKRVQMA------SAGGLHNIALTE 152

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G +++WG  + G LGHG       P+L+E      +  V+ G  HT AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWG 212

Query: 322 DGTYNSGLLGHGS-----KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
                 G LGHG+     + +   P KV   LD + ++ + CG + T  +T +G L+++G
Sbjct: 213 R-DEGEGRLGHGNPDIMDEGALSRPTKVQA-LD-VPIALVYCGGFFTMALTKSGQLWSWG 269

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             +   LGHG   +   P+ V  L  +   +V+CG +H AA+              T  G
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL--------------TQDG 315

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           K+ TWG G  G+LGHG  E    P  V  + D+    +ACG   + A+T +G +YT G  
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 497 AYGQLGVPVADGLVPTRVDG---EIAESFVEE-------VACGAYHVAALTSTSK 541
              QLG+P   GL   ++D    +  ++  E+       V+CGA H   + S  K
Sbjct: 376 RDYQLGIP---GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPK 427



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 19/245 (7%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV--GYSFSRQTDALLPKAVEST 241
           +V  S+ GS        G+++ WG     G LG G   +    + SR T     +A++  
Sbjct: 189 IVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKV---QALDVP 245

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
           +AL    + CG    + +TK G+++SWG  +   LGHG  A+   P+++  L  V +  V
Sbjct: 246 IAL----VYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQV 301

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACG +H  A+T+ G + TWG G   +G LGHG+  +   P  V    D    +YI+CG  
Sbjct: 302 ACGGFHAAALTQDGKVITWGYG--GNGQLGHGTLENGKEPAIVEAMADKT-CTYIACGPA 358

Query: 362 HTAVVTSAGHLFTFG---DGSFGALGHGDH----ISTSIPREVETLRGLRTTRVSCGVWH 414
            TA +T  G L+T+G   D   G  G  D     +    P+ +     +    VSCG  H
Sbjct: 359 WTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANH 418

Query: 415 TAAVV 419
              +V
Sbjct: 419 GVCIV 423



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-----------APLIDENICQ----- 473
           SG  +  +++ WG G  G++GHG ++    P  +           AP+      +     
Sbjct: 29  SGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGN 88

Query: 474 --VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
             V CG   SV L     V+  G    G+LG+          V+  I    V+  + G  
Sbjct: 89  VGVTCGLFHSV-LFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGL 145

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC-- 589
           H  ALT    VYTWG GA G LGHG  +    P L++     ++  V  G + TA +   
Sbjct: 146 HNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTES 205

Query: 590 --LHKW 593
             L+ W
Sbjct: 206 GELYTW 211


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 204/412 (49%), Gaps = 49/412 (11%)

Query: 188 SSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           + HG    D +    V+ WG G  +G LG          ++  D LLP+ +  T    + 
Sbjct: 2   AEHGETQADEEEEEQVWSWGAG-TDGQLG---------TTKLQDELLPQLLSLTSLPSIS 51

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            +ACG  H + +T  G++F+WG  S G+LGHG   +++ P+L+       +   A G  H
Sbjct: 52  MLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSH 111

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           +  V+ SG ++T G+G++  G LGHG  +S   P KVS + +   +  ++CG+ H+ V+ 
Sbjct: 112 SGFVSDSGCIFTCGNGSF--GQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLF 168

Query: 368 SAGHLFTFGDGSFGALGH-GDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   +  FG G  G LG   D I S ++P  V  L+ +   R+S    H+AA+       
Sbjct: 169 AGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI------- 221

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  ++ G+ F+WG G  G  G     P+  P   +PL   +  +VA G + ++ LT
Sbjct: 222 -------SADGQFFSWGRGFCG--GPDVHAPQSLP---SPL---SFREVAVGWNHALLLT 266

Query: 486 TSGHVYTMGSA-----AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
             G V+ +GS         QL +  ++ L     D +  +  V ++A GA H AA+T   
Sbjct: 267 VDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVK--VMQIAAGAEHSAAVTENG 324

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDF----LKDKQVKRVVCGLNFTAII 588
           +V TWG G +GQLG G+ +++ SP LV      L+ K++K V CG  FT  +
Sbjct: 325 EVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 24/170 (14%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VV  S++G       + G  F WG G   G                 D   P+++ S ++
Sbjct: 208 VVRISANGDHSAAISADGQFFSWGRGFCGG----------------PDVHAPQSLPSPLS 251

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI---LSGVNVEL 300
                +A G  HA+L+T  GE+F  G     +    +    S   L E      GV V  
Sbjct: 252 F--REVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQ 309

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLD 349
           +A G  H+ AVT +G++ TWG G +  G LG G+      P  VS G++D
Sbjct: 310 IAAGAEHSAAVTENGEVKTWGWGEH--GQLGLGNTNDQTSPELVSLGSID 357


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 211/476 (44%), Gaps = 62/476 (13%)

Query: 106 VTPFDFGDIQGTQVPLDNVSN--------NGLGKAFADIISYTEAANTNSRADSVSFSPS 157
           V P D    QG  VP +   N        +G    F   +S   + N  ++  S+     
Sbjct: 42  VIPVDLLVGQGVAVPFERAKNEKLLLQIYSGTLGDFYTFLSVLCSKNCVNKQPSIRLKEE 101

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
            L     D    R+   +  R+  S                   +V++WG    N  L  
Sbjct: 102 LLKRGI-DVEKSRTDPYKEMRVEPS-------------------EVYVWGSK-RNLLLAA 140

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
            E           + L P   +    LD  +IACG     +V++ G IF+ G+   G LG
Sbjct: 141 DE----------KNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLG 190

Query: 278 HGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
            G   DV+ P+ I  L  V V  VA   G  H  A+T  G +Y+WG G  + G LGHG+ 
Sbjct: 191 LGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCG--DRGQLGHGNT 248

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
           +    P  +   L    ++ I+CG  H+  V S G +F++GDGS GALGHG++++  +P+
Sbjct: 249 LGYLDPTLID-ELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPK 307

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++ +L G     V+CG  +T A  VA D              +++WG G  G LG+G + 
Sbjct: 308 KIMSLNGKHIMAVACGECYTIA--VAGDD-------------VWSWGLGGNGELGYGVEM 352

Query: 456 PRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTR 513
           P  + P  +  L  + I  VACG+  S A++ +G V+  GS    +LG+     +V P  
Sbjct: 353 PSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPRE 412

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
           + G++    ++ V    +H  A+    +VY WG    G +G+ D+D +    ++ +
Sbjct: 413 IQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGN-DEDAKQQQCMLSY 467



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 161/323 (49%), Gaps = 23/323 (7%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E++ WG +    L    E +   P   ++L  ++   +ACG      V+R+G ++  G G
Sbjct: 126 EVYVWGSKRNLLLA-ADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKG 184

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY-ISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             + G LG G+     +PR++   L  +  +  I  G  H   +T+ G ++++G G  G 
Sbjct: 185 --HMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQ 242

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHG+ +    P  ++ L+    T+++CG  H+ AV+              S GK+F+WG
Sbjct: 243 LGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL--------------SDGKIFSWG 288

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL- 501
           DG  G LGHG+   +L P+ +  L  ++I  VACG   ++A+     V++ G    G+L 
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELG 347

Query: 502 -GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            GV +    +PT+++    +  +  VACG     A+++  KV+ WG G   +LG G++  
Sbjct: 348 YGVEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKV 406

Query: 561 RNSPTLVDF-LKDKQVKRVVCGL 582
              P  +   LK K++KRVV  L
Sbjct: 407 IVKPREIQGDLKGKKIKRVVASL 429



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 27/292 (9%)

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G++VE      Y    V  S ++Y WG       LL    + +   P K S  L+ +  S
Sbjct: 106 GIDVEKSRTDPYKEMRVEPS-EVYVWGS---KRNLLLAADEKNPLEPDK-SKLLENLDPS 160

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC--GV 412
            I+CG     VV+  G +F  G G  G LG G+    ++PR++  L  +  T V+   G 
Sbjct: 161 DIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGG 220

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H  A+              T+ GK+++WG GD+G+LGHG+    L P  +  L  + + 
Sbjct: 221 RHAMAL--------------TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVT 266

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGA 530
           ++ACG   S+A+ + G +++ G  + G L  G  +A  L+P ++   +    +  VACG 
Sbjct: 267 KIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQ-LLPKKIM-SLNGKHIMAVACGE 324

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTLVDFLKDKQVKRVVCG 581
            +  A+     V++WG G NG+LG+G +  +   PT ++ L  K +  V CG
Sbjct: 325 CYTIAVAG-DDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACG 375



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 18/198 (9%)

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P + + L  L  + ++CG  + +  VV+ +            G +F  G G  G LG G+
Sbjct: 148 PDKSKLLENLDPSDIACG--YDSLFVVSRN------------GGIFACGKGHMGCLGLGN 193

Query: 454 KEPRLFPECVAPLIDENICQVAC--GHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LV 510
            +    P  +  L+   +  VA   G   ++ALT  G VY+ G    GQLG     G L 
Sbjct: 194 CDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLD 253

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           PT +D E+    V ++ACGA H  A+ S  K+++WG G+NG LGHG+   +  P  +  L
Sbjct: 254 PTLID-ELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSL 312

Query: 571 KDKQVKRVVCGLNFTAII 588
             K +  V CG  +T  +
Sbjct: 313 NGKHIMAVACGECYTIAV 330


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 169/330 (51%), Gaps = 26/330 (7%)

Query: 277 GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN---SGLLGHG 333
           GHG   D   P+ +E L+   V  V+ G YH+   T+ G L ++G G+ N    G LGHG
Sbjct: 90  GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
            + +  IPR V  +L G+ +  ++ G  H+ V++  G++F+FG G  G+LGHGD     +
Sbjct: 150 DQRTQMIPRPVL-SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV 208

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P+ + +L+  +   ++ G  H+  V                 G ++++G G +G LGHGD
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVV--------------AESGDVYSFGLGSEGALGHGD 254

Query: 454 KEPRLFPECVAPLIDENICQVACG--HDLSVA----LTTSGHVYTMGSAAYGQLGVPVAD 507
            +  L P+ +   +     +VA G  H L ++    L   G V + G  +YGQLG+    
Sbjct: 255 TDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFS 314

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTL 566
            ++ +    ++ E+   E+  GA+H   LT+  +VY++G   +GQLGHG D  +   PTL
Sbjct: 315 RMIASPAQVQV-EAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTL 373

Query: 567 VDFLKDKQVKRVVCGLNFTAIICLHKWVSS 596
           +  L+ +++  V  G NF+ ++     V S
Sbjct: 374 IQSLERERIVDVAAGNNFSLVLSAEGTVFS 403



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 181/368 (49%), Gaps = 21/368 (5%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG-----GRLGHGREAD 283
             D L PK VE+     V +++ G  H+++ TK G + S+G  S      GRLGHG +  
Sbjct: 94  HVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRT 153

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P+ +  LSGV +  VA G +H+  ++  G+++++G G    G LGHG +    +P+ 
Sbjct: 154 QMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGI--DGSLGHGDQARQLVPKL 211

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           +S +L    +  I+ G  H+ VV  +G +++FG GS GALGHGD   + +P+++E     
Sbjct: 212 IS-SLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR 270

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              +V+ G  H+  +        S        G++ ++G    G+LG G    R+     
Sbjct: 271 PAVKVAAGGSHSLVL--------SKLYVLEQEGRVLSFGQNSYGQLGLGHFS-RMIASPA 321

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG--VPVADGLVPTRVDGEIAES 521
              ++    ++  G   S+ LT  G VY+ G A +GQLG    + D   PT +     E 
Sbjct: 322 QVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERER 381

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            V+ VA G      L++   V+++G G NG+LG GD+ N   PT+V F     V  +  G
Sbjct: 382 IVD-VAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVV-FAAGHTVSAISAG 439

Query: 582 LNFTAIIC 589
            + + ++ 
Sbjct: 440 YSHSLVVV 447



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 28/308 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +  +G G AN  + G   R+G+   R    ++P+ V S   + +  +A GA H+++++
Sbjct: 128 GGLLSFGYGSANVVVDG---RLGHGDQRTQ--MIPRPVLSLSGVRIVKVAAGAHHSLVLS 182

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            QG +FS+G    G LGHG +A    P+LI  L    V  +A G  H+  V  SGD+Y++
Sbjct: 183 DQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSF 242

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG-----LWHTAVVTSAGHLFTF 375
           G G+   G LGHG      +P+K+   +    +   + G     L    V+   G + +F
Sbjct: 243 GLGS--EGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSF 300

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G  S+G LG G H S  I    +         +  G  H+  +              T+ 
Sbjct: 301 GQNSYGQLGLG-HFSRMIASPAQVQVEAAAVEIEAGAHHSLVL--------------TND 345

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+++++G    G+LGHG D      P  +  L  E I  VA G++ S+ L+  G V++ G
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405

Query: 495 SAAYGQLG 502
               G+LG
Sbjct: 406 CGKNGRLG 413



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 28/250 (11%)

Query: 369 AGHLFTFG--DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           AG++ +FG  D S    GHGDH+    P+ VE L   R   VS G++H+           
Sbjct: 77  AGNVVSFGLADPS----GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLV--------- 123

Query: 427 SSPSGSTSCGKLFTWGDGD-----KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                +T  G L ++G G       GRLGHGD+  ++ P  V  L    I +VA G   S
Sbjct: 124 -----ATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHS 178

Query: 482 VALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + L+  G+V++ G    G LG    A  LVP  +     E  V+ +A G+ H   +  + 
Sbjct: 179 LVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVD-IAAGSAHSLVVAESG 237

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHS 600
            VY++G G+ G LGHGD D    P  ++    +   +V  G + + ++    +V   +  
Sbjct: 238 DVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLS-KLYVLEQEGR 296

Query: 601 VCSSCHNPFG 610
           V S   N +G
Sbjct: 297 VLSFGQNSYG 306


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 184/400 (46%), Gaps = 59/400 (14%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ V++   ++  ++A G     +V++ GE++ WG  S G+LG G   D S P++++ L 
Sbjct: 102 PRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVKALQ 161

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV------------------ 336
           G  V++VAC + HT      G  Y WG    N  L  HG  +                  
Sbjct: 162 GKIVKVVACAQEHTVCCLDDGSAYAWGC-ALNGRLGLHGLSIPSSAGLGVSAPPGAPTKG 220

Query: 337 --------SCWI--PRKVSGNLDGIHLSYISCGLWHTAVV----TSAGHLFTFGDGSFGA 382
                   +C +  PR +  +L G  ++ ++CG++HTA +         LFT G G  G 
Sbjct: 221 ARTEPLASACLVCTPRVLE-SLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGR 279

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LGHGD     +P  V  L  L  T ++CG  HTA V              TS G L+ WG
Sbjct: 280 LGHGDEEDRHLPTPVHALENLNITAIACGAHHTACV--------------TSGGTLYMWG 325

Query: 443 DGDKGRLGHGD-KEPRLFPECVA-PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
               G+LG G  +  +L P+ V  PL ++ +  VA G   S  +TT G +YT G     +
Sbjct: 326 GAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGR--R 383

Query: 501 LGVPV---ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           LG  V   +D  +P RV+  +   FV  V CG  H A +     V+ WG   +  LGHGD
Sbjct: 384 LGHEVQGESDEFLPRRVEALVGL-FVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGD 440

Query: 558 KD-NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSS 596
            +   N P+ +  L  K V ++ C   FTA  C  + VSS
Sbjct: 441 LEAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVSS 480



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 160/340 (47%), Gaps = 50/340 (14%)

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           + S P+L++ L G+N   VA G      V++SG+LY W  G  + G LG G +    +PR
Sbjct: 98  ESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMW--GCNSEGQLGTGDRRDASVPR 155

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTS--------- 392
            V   L G  +  ++C   HT      G  + +G    G LG HG  I +S         
Sbjct: 156 VVKA-LQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPP 214

Query: 393 -------------------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
                               PR +E+L G   T V+CG++HTA + V     +S      
Sbjct: 215 GAPTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTS------ 268

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
               LFT G G  GRLGHGD+E R  P  V  L + NI  +ACG   +  +T+ G +Y  
Sbjct: 269 ----LFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYMW 324

Query: 494 GSAAYGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
           G AA+G+LG+    G  L+P  V G +    V  VA G+ H A +T+  ++YTWG+G   
Sbjct: 325 GGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGR-- 382

Query: 552 QLGH---GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +LGH   G+ D    P  V+ L    V  VVCG   TA I
Sbjct: 383 RLGHEVQGESDE-FLPRRVEALVGLFVIHVVCGDAHTACI 421



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 22/220 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F  G G+ NG LG G+         + D  LP  V +   L++  IACGA H   VT  
Sbjct: 269 LFTCGLGL-NGRLGHGD---------EEDRHLPTPVHALENLNITAIACGAHHTACVTSG 318

Query: 263 GEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G ++ WG  + G+LG G  R + +    +   L    V  VA G  H+  VT  G+LYTW
Sbjct: 319 GTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTW 378

Query: 321 GDGTYNSGLLGHGSKVSC--WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G G      LGH  +     ++PR+V   L G+ + ++ CG  HTA +   G+++ +G  
Sbjct: 379 GQGRR----LGHEVQGESDEFLPRRVEA-LVGLFVIHVVCGDAHTACIVENGNVWAWGTS 433

Query: 379 SFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAA 417
               LGHGD     + P  +  L G    ++SC    TAA
Sbjct: 434 RI--LGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAA 471



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 13/111 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG+G           R+G+    ++D  LP+ VE+ + L V ++ CG  H   + 
Sbjct: 373 GELYTWGQG----------RRLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAHTACIV 422

Query: 261 KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHTCA 310
           + G +++WG      LGHG  EA  + P  +  LSG  V  ++C    T A
Sbjct: 423 ENGNVWAWGTSR--ILGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAA 471


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 178/366 (48%), Gaps = 49/366 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEIL-----SGV--------------NVELVACG 304
           E+++WG  + G++GHG E     P LI  L     +G+              NV  V CG
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVG-VTCG 94

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+       D++ WG G  + G LG  ++ + + P  V+  +  + ++  S G  H  
Sbjct: 95  LFHSVLFAEQ-DVFVWGKG--DGGRLGIDTEFNQYKPY-VNPRIKRVQMA--SAGGLHNI 148

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T  G+++T+G G+FGALGHG +    +PR +E     R   VS G  H+AAV      
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV------ 202

Query: 425 SSSSPSGSTSCGKLFTWG-DGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHD 479
                   T  G+L+TWG D  +GRLGHG+     E  L        +D  I  V CG  
Sbjct: 203 --------TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGF 254

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            ++ALT SG +++ G  A  +LG          +V   + +  + +VACG +H AALT  
Sbjct: 255 FTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQD 314

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVS 595
            KV TWG G NGQLGHG  +N   P +V+ + DK    + CG  +TA I     L+ W  
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGK 374

Query: 596 SVDHSV 601
           + D+ +
Sbjct: 375 NRDYQL 380



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 175/356 (49%), Gaps = 36/356 (10%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            + CG  H+VL  +Q ++F WG+  GGRLG   E +   P +   +    V++ + G  H
Sbjct: 90  GVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLH 146

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
             A+T  G++YTWG G +  G LGHGS     +PR + G      + ++S G  H+A VT
Sbjct: 147 NIALTEVGNVYTWGYGAF--GALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHSAAVT 203

Query: 368 SAGHLFTFG-DGSFGALGHG-----DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +G L+T+G D   G LGHG     D  + S P +V+ L  +    V CG + T A+   
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFFTMAL--- 259

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      T  G+L++WG      LGHG +     P+ VA L D  + QVACG   +
Sbjct: 260 -----------TKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHA 308

Query: 482 VALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            ALT  G V T G    GQLG   + +G  P  V+  +A+     +ACG    AA+T   
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVE-AMADKTCTYIACGPAWTAAITENG 367

Query: 541 KVYTWGKGANGQLG-HGDKDNRNSPTLVDF---LKDK---QVKRVVCGLNFTAIIC 589
            +YTWGK  + QLG  G KD +  P LV F   L +K   +V  V CG N    I 
Sbjct: 368 DLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 47/355 (13%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DVF+WG+G       GG   +   F++    + P+     MA      + G  H + +T+
Sbjct: 105 DVFVWGKG------DGGRLGIDTEFNQYKPYVNPRIKRVQMA------SAGGLHNIALTE 152

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G +++WG  + G LGHG       P+L+E      +  V+ G  H+ AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWG 212

Query: 322 DGTYNSGLLGHGS-----KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
                 G LGHG+     + +   P KV   LD + ++ + CG + T  +T +G L+++G
Sbjct: 213 R-DEGEGRLGHGNPDIMDEGALSRPTKVQA-LD-VPIASVYCGGFFTMALTKSGQLWSWG 269

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             +   LGHG   +   P+ V  L  +   +V+CG +H AA+              T  G
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL--------------TQDG 315

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           K+ TWG G  G+LGHG  E    P  V  + D+    +ACG   + A+T +G +YT G  
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 497 AYGQLGVPVADGLVPTRVDG---EIAESFVEE-------VACGAYHVAALTSTSK 541
              QLG+P   GL   ++D    +  ++  E+       V+CGA H   + S  K
Sbjct: 376 RDYQLGIP---GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPK 427



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 23/247 (9%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV--GYSFSRQTDALLPKAVEST 241
           +V  S+ GS        G+++ WG     G LG G   +    + SR T           
Sbjct: 189 IVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPT---------KV 239

Query: 242 MALDV--HNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
            ALDV   ++ CG    + +TK G+++SWG  +   LGHG  A+   P+++  L  V + 
Sbjct: 240 QALDVPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLV 299

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            VACG +H  A+T+ G + TWG G   +G LGHG+  +   P  V    D    +YI+CG
Sbjct: 300 QVACGGFHAAALTQDGKVITWGYG--GNGQLGHGTLENGKEPAIVEAMADKT-CTYIACG 356

Query: 360 LWHTAVVTSAGHLFTFG---DGSFGALGHGDH----ISTSIPREVETLRGLRTTRVSCGV 412
              TA +T  G L+T+G   D   G  G  D     +    P+ +     +    VSCG 
Sbjct: 357 PAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGA 416

Query: 413 WHTAAVV 419
            H   +V
Sbjct: 417 NHGVCIV 423



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-----------APLIDENICQ----- 473
           SG  +  +++ WG G  G++GHG ++    P  +           AP+      +     
Sbjct: 29  SGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGN 88

Query: 474 --VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
             V CG   SV L     V+  G    G+LG+          V+  I    V+  + G  
Sbjct: 89  VGVTCGLFHSV-LFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGL 145

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC-- 589
           H  ALT    VYTWG GA G LGHG  +    P L++     ++  V  G + +A +   
Sbjct: 146 HNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTES 205

Query: 590 --LHKW 593
             L+ W
Sbjct: 206 GELYTW 211


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 181/359 (50%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK + +T A D   I  G     +++ 
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKI----------LQPK-LAATFA-DAQTIEAGQYCTFVISS 430

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +       ++ V+     + HT A T  G+++
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A V+  G L+T+G+G
Sbjct: 491 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 548

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 549 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 593

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ V  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 653

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + V +++ G  H  AL+  ++VY WG  + GQ G G+
Sbjct: 654 LGCGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 711



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 150/293 (51%), Gaps = 32/293 (10%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V+ + ++Y WG  + +   L  G++     P+  +   D      I  G + T V++S G
Sbjct: 378 VSETCEVYVWGSNSSHQ--LVEGTQEKILQPKLAATFADA---QTIEAGQYCTFVISSDG 432

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREV--ETLRGLRTTRVSCGV-WHTAAVVVATDSSSS 427
            +   G GS+G LG GD  + S  +++  E  R ++    S G   HT A          
Sbjct: 433 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAF--------- 483

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALTT 486
                T+ G++F+WGDGD G+LGHG+   + +P+ +  PL  + +  V+ G+  S A++ 
Sbjct: 484 -----TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 538

Query: 487 SGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G +YT G   +G+LG   ++   +PT V  +I  S V EV+CG+ H  AL+   + V++
Sbjct: 539 DGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DI--SNVGEVSCGSSHTIALSKDGRTVWS 595

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           +G G NG+LGHGD +    P +V+ L+   +++V  G    L  T+   ++ W
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 648



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 147/304 (48%), Gaps = 32/304 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VSSS     H   F + G+VF WG+G   G LG G      S +++   L+   ++  + 
Sbjct: 470 VSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN-----SSTQKYPKLIQGPLQGKV- 522

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V  ++ G RH+  V++ GE+++WGE   GRLGHG     + P L++ +S  NV  V+C
Sbjct: 523 --VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSC 578

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT A+++ G    W  G  ++G LGHG     + P+ V   L G+ +  +  G   +
Sbjct: 579 GSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSS 636

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             +TS G ++ +G G+   LG G   +T++ P+ +E L   R   +S G  H  A+    
Sbjct: 637 LALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL---- 690

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLS 481
                     +   +++ WG+   G+ G G+   P   P+ V  L    I Q++ G   S
Sbjct: 691 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHS 740

Query: 482 VALT 485
           +A T
Sbjct: 741 LAWT 744



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           VV+    ++ +G  S   L  G       P+   T    +T  +  G + T   V+++D 
Sbjct: 377 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQT--IEAGQYCT--FVISSDG 432

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +       I +V+      GH 
Sbjct: 433 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHT 480

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA++ 
Sbjct: 481 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 538

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 539 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 583



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK VE+ 
Sbjct: 571 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVVEAL 621

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   V  
Sbjct: 622 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELATTRVVD 679

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  A++   ++Y WG+ +   G  G G+       P+KV G LDG+ +  IS G
Sbjct: 680 ISIGDSHCLALSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVVG-LDGVAIQQISAG 736

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 737 TSHSLAWTA 745


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 172/326 (52%), Gaps = 24/326 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG  H+V + + GE+++ G  + G+LGH RE +   P+ I  L+  ++  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A++  G L++WG G+    GL+     V+  +PR +   L+   +  +SCG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            + + G  FT+G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG  + G+LG  D++ R  P  V  L  + +  ++CG + +  
Sbjct: 209 ------------GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK- 541
           LT SG V+T G+ + GQLG   + D + P RV  E+  S V ++ACG  H  A   +S  
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           +Y +G GA GQLG G   N   P+ V
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 161/329 (48%), Gaps = 31/329 (9%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+ G     +  V+ PQ+   +S  +V+ VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 323 GTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            T   G LGH   G+K     P ++ G L   H+ +++CG  H+  ++  G LF++G GS
Sbjct: 61  NT--KGQLGHEREGNK-----PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 380 FGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG      S ++PR ++ L      +VSCG WH  A+  A D            G+ 
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL--AAD------------GQF 158

Query: 439 FTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           FTWG    G+LG G + P +  P+ V  L    + QVA G   S AL+ SG V+  G   
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 498 YGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG+    D   P  V   +    V  ++CG  H A LT +  V+T+G G+ GQLGH 
Sbjct: 219 AGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++  +P  V  L   +V ++ CG   T
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHT 306



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 20/271 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P+ + +     + ++ACG  H++ ++ +G++FSWG  S G+LG    E  V+ P+LI+ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIH 352
           +   +  V+CG +H  A+   G  +TWG  ++  G LG G +  S   P++V  +L+GI 
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVR-SLEGIP 191

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           L+ ++ G  H+  ++ +G +F +G  + G LG  D      P  V+ LR  +   +SCG 
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            HTA +              T  G +FT+G G  G+LGH      + P  V  L+   + 
Sbjct: 252 EHTAVL--------------TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 297

Query: 473 QVACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           Q+ACG   ++A   +SG +Y  G  A GQLG
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V    SH  A  D    G +F WG G ++G LG          + +    +P+ ++    
Sbjct: 89  VACGESHSLALSD---RGQLFSWGAG-SDGQLG--------LMTTEDSVAVPRLIQKLNQ 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
             +  ++CG  H + +   G+ F+WG+ S G+LG G+E    + PQ +  L G+ +  VA
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG    N+G LG   +     P  V   L    + YISCG  H
Sbjct: 197 AGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAV+T +G +FTFG GS G LGH        PR V  L G   T+++CG  HT A V   
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV--- 310

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                      S G ++ +G G +G+LG G
Sbjct: 311 ----------PSSGLIYAFGCGARGQLGTG 330



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 24/251 (9%)

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           +V G +    +  ++CG  H+  +   G ++T G  + G LGH      + P ++  L  
Sbjct: 26  QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALAD 83

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPE 461
                V+CG  H+ A+              +  G+LF+WG G  G+LG    E  +  P 
Sbjct: 84  QHIIHVACGESHSLAL--------------SDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES 521
            +  L  + I QV+CG+   +AL   G  +T G  ++GQLG+       P++   +   S
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---FPSQASPQRVRS 186

Query: 522 F----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
                + +VA G  H  AL+ +  V+ WG    GQLG  D+ +R SP  V  L+ ++V  
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246

Query: 578 VVCGLNFTAII 588
           + CG   TA++
Sbjct: 247 ISCGEEHTAVL 257



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG+  ++G LG     +G  F  Q     P+ V S   + +  +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG-----LGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG  + G+LG   E D   P  +++L    V  ++CGE HT  +T+SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G+   G LGH S      PR+V   L G  ++ I+CG  HT A V S+G ++ FG G+
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 380 FGALGHGDHISTSIPREVE 398
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 180/410 (43%), Gaps = 85/410 (20%)

Query: 254  RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI-EILSGVNVELVACGEYHTCAVT 312
            R+ V +  +  I++WG    GRLGHG     S PQ I    S   +  VACG  H+ A +
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 313  RSGDLYTWGDGTYNSGLLGHGSKVSC------WIPRKVSGNLDGIHLSYISCGLWHTAVV 366
              G +Y WG G  + G LG      C      + P+ V  NL    +  I+CG WH   +
Sbjct: 1230 FDGGVYAWGAG--DRGQLGSLENFDCVKINYAFNPQPVL-NLKRYFILSIACGRWHNMTL 1286

Query: 367  TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            TS   + ++G G FG LG   ++S   P+ V+ L G    ++ CG WH+AA++       
Sbjct: 1287 TSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAIL------- 1339

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKE----PRL------------------------ 458
                     GK+  WG    G+LGHGD +    PR+                        
Sbjct: 1340 -------ESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVM 1392

Query: 459  ---------------------------FPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
                                        P  +  L  +NICQVA G   S+AL+  G V+
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVW 1452

Query: 492  TMGSAAYGQLG-VPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            + G + +GQLG   + D L PT  ++       V+ +ACG    AA+++  +V+TWG G 
Sbjct: 1453 SWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGE 1512

Query: 550  NGQLGHGDKDNRNSPTLV-DFLKDKQVKRVVCGLNFTAIICLHKWVSSVD 598
            +G+LGH  K    +P+L+ DF    +V ++ CG    A I     + +++
Sbjct: 1513 SGELGHAPKVLTYAPSLIKDF---SEVVQIACGFKHMAGIVFKPRMKTIE 1559



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 152/316 (48%), Gaps = 31/316 (9%)

Query: 263 GEIFSWGEESGGRLGHG-----READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           G I+++G+   GRLGHG      E  V HP+ IE L+ ++V  +ACG+  T A+T +G +
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           YTWG        LG G  ++  +P+ V  +L    +  IS G  H A  T     F +G 
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633

Query: 378 GSFGALGHGDHISTSIP--REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            +FG LG   HIS+ +P   E+ +LR      ++CG WHT                ST+ 
Sbjct: 634 NTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLI--------------STNT 678

Query: 436 GKLFTWGDGDKGRLGHGDKEPR--------LFPECVAPLIDENICQVACGHDLSVALTTS 487
           G + + G G  G+LGHGD E           F + V    D  I +V+ G + S A+T  
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G ++T G     QLG   +      R     A+  V +V+ G  H+ AL  +   Y+WG 
Sbjct: 739 GRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGN 798

Query: 548 GANGQLGHGDKDNRNS 563
           G+ GQLGHG+   R +
Sbjct: 799 GSAGQLGHGEMCERET 814



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 54/400 (13%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           VF+WG+G  NG LG     + +         +P  V +   + V   A G +H + ++  
Sbjct: 92  VFMWGDG-ENGKLGNQSEEIQH---------VPYIVPAFRNVLVKVCALGKQHTLFLSAD 141

Query: 263 GEIFSWGEESGGRLGHG-----READVSHP-------QLIEILSGVN-VELVACGEYHTC 309
           G + S G    G+LG G     R   VS P       +L  I+  +N +  +A G YH+ 
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSL 201

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A+  +G +++WG G++  G LG GS  +   PR V+ +L    + +I+CG  HTA +T+ 
Sbjct: 202 ALNDTGKIFSWGSGSW--GKLGIGSDANAESPRFVA-SLQNSKVVHIACGAHHTAAITTV 258

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G ++T+G G  G LGH        PR   +LR     ++ CG  HT  ++ +        
Sbjct: 259 GDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRS-------- 310

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                 G+L++ G    G+LG GD   R+ P  V    +E +  +      S+ALT +G 
Sbjct: 311 ------GQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGK 364

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V+  G+     L        +P  V G      +  VA  A+   A++ T +++ W   +
Sbjct: 365 VFAFGNETEPHL------NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFS 418

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +        +  +S  L  F   K V R+ CG N  A+IC
Sbjct: 419 S--------EEESSRMLESFHAIKGVVRMFCGHNHMAVIC 450



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 168/365 (46%), Gaps = 54/365 (14%)

Query: 197  FDSLGDVFIWGEGIANGFLGGGEH----RVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
            FD  G V+ WG G   G LG  E+    ++ Y+F+       P+ V +     + +IACG
Sbjct: 1230 FD--GGVYAWGAG-DRGQLGSLENFDCVKINYAFN-------PQPVLNLKRYFILSIACG 1279

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
              H + +T + ++ SWG    G+LG         PQ+++ L G     + CG +H+ A+ 
Sbjct: 1280 RWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAIL 1339

Query: 313  RSGDLYTWGDGTYNSGLLGHGSKVSCWIPR-----KVSGNLDGIHLSYISCGLWHTAVVT 367
             SG +  WG   Y  G LGHG   SC  PR     ++ G +    L     G  HT VV 
Sbjct: 1340 ESGKILLWGKNVY--GQLGHGDTKSCSAPRVNQYLRLEGKVRTAGL-----GANHTLVVM 1392

Query: 368  SAGHLFTFGDGSFGALGHGDHIST--SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
             A  +F  G    G LG  D   T  ++P  +E L G    +V+ G  H+ A+ V     
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSV----- 1447

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-----NICQVACGHDL 480
                      G++++WG    G+LGH     +L P    PL++      ++  +ACG+  
Sbjct: 1448 ---------FGEVWSWGGSPFGQLGHETITDKLAP---TPLLERHKIPPDVKSIACGYTF 1495

Query: 481  SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            S A++  G V+T G+   G+LG  P      P+ +  + +E  V ++ACG  H+A +   
Sbjct: 1496 SAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIK-DFSE--VVQIACGFKHMAGIVFK 1552

Query: 540  SKVYT 544
             ++ T
Sbjct: 1553 PRMKT 1557



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 27/310 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ +G+G+  G LG   H V Y+ S ++    PK +E+   + V  IACG      +T
Sbjct: 515 GYIYTYGKGVF-GRLG---HGVEYTRSEES-VKHPKRIETLAKMSVVFIACGKDSTAALT 569

Query: 261 KQGEIFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             G++++WG+ + G+LG   G+   +  PQL++ LS   V  ++ G  H    T     +
Sbjct: 570 DTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFF 629

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            WG  T+    + H   +S ++P      +L   ++  I+CG WHT + T+ G + + G 
Sbjct: 630 VWGSNTFGQLGIPH---ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 378 GSFGALGHGDH-----ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           G  G LGHGD+     +S ++P   + + G   +            +V   +   S +  
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDS-----------FIVKVSAGKESSAAI 735

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T+ G+LFTWG GD+ +LGH   +   +P  V       +  V+ G    +AL  SG  Y+
Sbjct: 736 TNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYS 795

Query: 493 MGSAAYGQLG 502
            G+ + GQLG
Sbjct: 796 WGNGSAGQLG 805



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 182/450 (40%), Gaps = 90/450 (20%)

Query: 200  LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV--ESTMALDVHNIACGARHAV 257
             G+V+ WG G   G LG             TD L P  +     +  DV +IACG   + 
Sbjct: 1448 FGEVWSWG-GSPFGQLG---------HETITDKLAPTPLLERHKIPPDVKSIACGYTFSA 1497

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHP-------QLIEILSGVN------------- 297
             ++ +GE+F+WG    G LGH  +     P       ++++I  G               
Sbjct: 1498 AMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKT 1557

Query: 298  VEL----------------VACGE-------------------YHTCAVTRSGDLYTWGD 322
            +EL                +A G                    +      R G ++ WG+
Sbjct: 1558 IELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGE 1617

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             T   G LG     +   P  +  +L    + +IS     +A VT +G L+  G    G 
Sbjct: 1618 DT--CGQLGIRGLQAARSPSLMQ-SLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGR 1674

Query: 383  LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            LG G       P E+ +L  ++  +V+CG +H  A+              T   +++ WG
Sbjct: 1675 LGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLAL--------------TEEKRVYAWG 1720

Query: 443  DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
            DG  G  G  +    L P+ ++ L   +I  V  G   S AL+  G ++  G  + GQLG
Sbjct: 1721 DGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLG 1780

Query: 503  VPVADGL--VPTRVDGEIAESFVEEVACGAYHVAAL--TSTSKVYTWGKGANGQLGHGDK 558
            +         PT++     +  V +V+ GA H A L   ++  ++T G  ANGQLG GD 
Sbjct: 1781 LGTTSAAEDSPTKISN--LDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDF 1838

Query: 559  DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +R++ T VD L D+Q+    CG   TA +
Sbjct: 1839 VDRSTLTAVDALDDRQIVSASCGAAHTAAV 1868



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 164/373 (43%), Gaps = 33/373 (8%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF+WGE    G LG      G   +R      P  ++S +A  + +I+  +  +  VT
Sbjct: 1610 GCVFVWGEDTC-GQLG----IRGLQAARS-----PSLMQSLLATSIVHISANSDMSAFVT 1659

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G ++  G    GRLG G  A    P  I  L+ V +  VACG YH  A+T    +Y W
Sbjct: 1660 DSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            GDG + +  + + + V    P+++S +L    +  +  G +H+A ++  G LF +G  S 
Sbjct: 1720 GDGKWGNAGVSNTNDV--LEPQELS-SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSN 1776

Query: 381  GALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG G    +   P ++  L G+    VS G  H+A ++  T     SP+       LF
Sbjct: 1777 GQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQVT-----SPN-------LF 1823

Query: 440  TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            T G    G+LG GD   R     V  L D  I   +CG   + A++  G + T G+   G
Sbjct: 1824 TCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNG 1883

Query: 500  QLGVPVA---DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            QLG+      D   P ++     +  V +V CG      ++   ++Y    G    +G G
Sbjct: 1884 QLGLKAGLSKDIENPVQLPAICNDPMV-KVVCGQEVTIVVSEKGELYM--AGYESTIGLG 1940

Query: 557  DKDNRNSPTLVDF 569
               +R     V F
Sbjct: 1941 GNSSRRREFDVSF 1953



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 140/309 (45%), Gaps = 41/309 (13%)

Query: 295 GVNVELVACGEYHTCAV----TRSGD--LYTWGDGTYNSGLLGHG-----SKVSCWIPRK 343
           G N E +   E+ T  V    +R GD  +YT+G G +  G LGHG     S+ S   P++
Sbjct: 491 GTNTEYLD--EFATVQVRDSPSREGDGYIYTYGKGVF--GRLGHGVEYTRSEESVKHPKR 546

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG--ALGHGDHISTSIPREVETLR 401
           +   L  + + +I+CG   TA +T  G ++T+G  + G   LG G  ++  +P+ V+ L 
Sbjct: 547 IE-TLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLS 605

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-P 460
                ++S G  H A               ST   K F WG    G+LG       +  P
Sbjct: 606 SHVVCQISLGRNHAAC--------------STDMHKFFVWGSNTFGQLGIPHISSYMPDP 651

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP--------T 512
             +  L + NI  +ACG   ++  T +G V + G   +GQLG    + L           
Sbjct: 652 YEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFK 711

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           ++     +SF+ +V+ G    AA+T+  +++TWGKG   QLGH    N   P  V+F   
Sbjct: 712 KIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK 771

Query: 573 KQVKRVVCG 581
            +V  V  G
Sbjct: 772 IRVVDVSIG 780



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           H+F +GDG  G LG+       +P  V   R +     + G  HT  + ++ D       
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHT--LFLSAD------- 141

Query: 431 GSTSCGKLFTWGDGDKGRLGHGD-----KEPRLFP------ECVAPLID--ENICQVACG 477
                G + + G    G+LG GD       P   P      + +  +I    NI  +A G
Sbjct: 142 -----GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAG 196

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           +  S+AL  +G +++ GS ++G+LG+         R    +  S V  +ACGA+H AA+T
Sbjct: 197 YYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAIT 256

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +   V+TWGKG  GQLGH       SP L   L+    +++ CG + T +I
Sbjct: 257 TVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVI 307



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 170/404 (42%), Gaps = 56/404 (13%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           ++GDV+ WG+G+       G   V   FS + +A L K            I CG  H ++
Sbjct: 257 TVGDVWTWGKGLRGQL---GHKSVKEEFSPRLNASLRKC-------GAQKIRCGDDHTLV 306

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           + + G+++S G  + G+LG G   D   P L+   +   V  +      + A+T +G ++
Sbjct: 307 ILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVF 366

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G+ T       H ++    IPR V+G      +  ++        ++  G LF +   
Sbjct: 367 AFGNETEP-----HLNR----IPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPF 417

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV---VATDSSSSSPSGSTSC 435
           S       +  S+ +      ++G+   R+ CG  H A +    +    +  S + STS 
Sbjct: 418 S------SEEESSRMLESFHAIKGV--VRMFCGHNHMAVICSPEMGCTQAMISRNKSTSF 469

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVALTTS----GHV 490
               +    +K            FP E + P +  N   +     + V  + S    G++
Sbjct: 470 SSDISRASLEK------------FPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYI 517

Query: 491 YTMGSAAYGQLGVPV----ADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           YT G   +G+LG  V    ++  V  P R++  +A+  V  +ACG    AALT T KVYT
Sbjct: 518 YTYGKGVFGRLGHGVEYTRSEESVKHPKRIE-TLAKMSVVFIACGKDSTAALTDTGKVYT 576

Query: 545 WGKGANGQLGHGDKDNRN--SPTLVDFLKDKQVKRVVCGLNFTA 586
           WGK A G+LG G         P LV  L    V ++  G N  A
Sbjct: 577 WGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 24/267 (8%)

Query: 161  NAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH 220
            NA   N+ND     E   ++  S++   + G         GD+F+WG+  +NG LG G  
Sbjct: 1726 NAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKN-SNGQLGLG-- 1782

Query: 221  RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK--QGEIFSWGEESGGRLGH 278
                + S   D+  P  + S +   V +++ GA H+ ++ +     +F+ G  + G+LG 
Sbjct: 1783 ----TTSAAEDS--PTKI-SNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGL 1835

Query: 279  GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
            G   D S    ++ L    +   +CG  HT AV++ GDL TWG+G   +G LG  + +S 
Sbjct: 1836 GDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNG--RNGQLGLKAGLSK 1893

Query: 339  WIPRKVSGNLDGI---HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP- 394
             I   V   L  I    +  + CG   T VV+  G L+  G  S   LG           
Sbjct: 1894 DIENPV--QLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDV 1951

Query: 395  --REVETLRGLRTTRVSCGVWHTAAVV 419
              REVE L  ++ T+++ G  H  A+V
Sbjct: 1952 SFREVEGL--IQPTQIAVGSVHVLALV 1976



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V   G+G  +G LG G++    + S+ T     K VE      +  ++ G   +  +T
Sbjct: 679 GSVMSCGKGW-HGQLGHGDYESLTALSK-TLPYFKKIVEGFGDSFIVKVSAGKESSAAIT 736

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +G +F+WG+    +LGH    + ++P+ +E  + + V  V+ G+ H  A+  SG  Y+W
Sbjct: 737 NKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSW 796

Query: 321 GDGTYNSGLLGHG 333
           G+G+  +G LGHG
Sbjct: 797 GNGS--AGQLGHG 807


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 180/414 (43%), Gaps = 44/414 (10%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE-- 291
           +P  V +   +    ++ GA H++ V   G  ++WG  + GRLG+G     S P L+   
Sbjct: 91  VPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAG 150

Query: 292 -ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNL- 348
            + SGV +  V  G +H+ AV  +GD+Y+WG   YN SG LG G+ ++  +P KVS    
Sbjct: 151 AVPSGVTISQVMAGGFHSLAVGSNGDIYSWG---YNRSGQLGDGTTLASSVPLKVSAGAV 207

Query: 349 -DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
             G+  S +S G  H+  + S G  + +G+   G LG G    T  P  V    G+  T+
Sbjct: 208 PAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ 267

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           VS G  H+ AV               S GK + WG+ D G+LG+      L P  V+P+ 
Sbjct: 268 VSAGDLHSLAV--------------GSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMG 313

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEV 526
              + QV+ G D S+A+   G+ Y  G    GQLG   +    VP  V      +F   +
Sbjct: 314 GLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTF-TRI 372

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             G  H     S    YTWG  + GQLG+G  D    P  +          V+  ++F  
Sbjct: 373 EAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAISRFP------VITEVSFGG 426

Query: 587 IICLHKWVSSVDHSVCSSCHNP-----------FGFRRKRHNCYNCGLVFCKAC 629
           ++      S+   +V +  H P           FGF   R      G  F +A 
Sbjct: 427 VVGTELSQSNGSWTVVAPAHEPGVVDVIVSYTQFGFANARTTI--DGFTFSEAS 478



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 29/313 (9%)

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
           S+ A    +++S V++   H  A     S GD++ WG    +G LG G         + +
Sbjct: 148 SAGAVPSGVTISQVMAGGFHSLA---VGSNGDIYSWGYN-RSGQLGDGTTLASSVPLKVS 203

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
              +P  V          ++ G RH++ +   G+ ++WGE  GG+LG G  +    P L+
Sbjct: 204 AGAVPAGVT------FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALV 257

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
              +GV+   V+ G+ H+ AV   G  Y WG+   +SG LG+ +  S   P  VS  + G
Sbjct: 258 SAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGN--NDSGQLGNATTTSSLAPVLVS-PMGG 314

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ +S G  H+  + + G+ + +G    G LG+    ++++P  V    G+  TR+  
Sbjct: 315 LAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEA 374

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA--PLID 468
           G  H+  +  A+D ++            +TWG    G+LG+G  +  L P  ++  P+I 
Sbjct: 375 GGLHS--LTAASDENT------------YTWGANSFGQLGNGTSDGSLVPVAISRFPVIT 420

Query: 469 ENICQVACGHDLS 481
           E       G +LS
Sbjct: 421 EVSFGGVVGTELS 433



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 36/252 (14%)

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           VSG L G+  + +S G+ H+  + S G+++ +G  S G LG+   +++S+P  V T  G+
Sbjct: 42  VSGVLPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV 101

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE----PRLF 459
             T+VS G  H+ AV               S G  + WG    GRLG+G       P L 
Sbjct: 102 TFTQVSAGADHSLAV--------------GSDGNAYAWGRNTDGRLGNGTSTGSSVPLLV 147

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG--------VP--VADGL 509
                P     I QV  G   S+A+ ++G +Y+ G    GQLG        VP  V+ G 
Sbjct: 148 SAGAVP-SGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGA 206

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
           VP  V          +V+ G  H  A+ S  K Y WG+   GQLG G      +P LV  
Sbjct: 207 VPAGVT-------FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSA 259

Query: 570 LKDKQVKRVVCG 581
                  +V  G
Sbjct: 260 PAGVSFTQVSAG 271


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 166/350 (47%), Gaps = 25/350 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
           +V ++A G  H VL+   GE+++ G    G+ G G    V     + I  G     V   
Sbjct: 265 EVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAY 324

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
            G  HT  V   G + ++G   YN  G LG G+  S  +P+ V G L+GI ++  SC  +
Sbjct: 325 NGCEHTLVVLDDGQMMSFG---YNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYY 380

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H+ +    G ++TFG   FG LG GD I   +P  VE+LRG R T ++CG +HT      
Sbjct: 381 HSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVV---- 436

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDL 480
               S+   G  SCGK       D G+LG    E  R F      L    +  V CG+  
Sbjct: 437 ----STLEIGVQSCGK------NDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYH 486

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTS 538
           ++ LT   HV+  G   YGQLG+      V  PT ++G   E  V  ++ G YH   + +
Sbjct: 487 TIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGA-QEKHVYRISAGCYHTVLIDA 545

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              ++ +G+  +GQLG GD + R+SP  V     K++ +V  G   T ++
Sbjct: 546 DGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 19/254 (7%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +PK V     + V   +C   H+V+    GE++++G    G+LG G   D   P L+E L
Sbjct: 360 VPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESL 419

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  +  +ACG+YHT   T    + + G   Y  G LG  S  S      V G LDG  +
Sbjct: 420 RGQRITTLACGQYHTVVSTLEIGVQSCGKNDY--GQLGLESTESQRKFVAVKGKLDGAQV 477

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCG 411
            ++ CG +HT V+T+  H+F FG   +G LG G H +  +  P  +E  +     R+S G
Sbjct: 478 RHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLG-HTTQRVFGPTIIEGAQEKHVYRISAG 536

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
            +HT  V++  D            G LF +G    G+LG GD   R  P  V+  + + I
Sbjct: 537 CYHT--VLIDAD------------GMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRI 582

Query: 472 CQVACGHDLSVALT 485
            +VA G   ++ LT
Sbjct: 583 AKVAAGFYHTIVLT 596



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 26/232 (11%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++T G  S+G LGH D  +      V+   G     V+ G  HT  +             
Sbjct: 233 VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLC------------ 280

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID--ENICQV----ACGHDLSVALT 485
             S G+++T G  D G+ G G  + R+      P ID      QV     C H L V   
Sbjct: 281 --STGEVYTAGYNDNGQCGQGTTQ-RVGVLTRVP-IDGGRKAVQVHAYNGCEHTLVV--L 334

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G + + G    GQLG    +   VP  V G +    V + +C  YH        +VYT
Sbjct: 335 DDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIACDNGEVYT 393

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSS 596
           +G+   GQLG GD  +R  P LV+ L+ +++  + CG   T +  L   V S
Sbjct: 394 FGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQS 445


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 181/369 (49%), Gaps = 29/369 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG   A+G LG G          +   ++P+ ++ + A +V  + CG  H + +TK+
Sbjct: 3   IYCWG-NTAHGELGLGG-------IEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE 54

Query: 263 GEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           G++++ G    G+LGH  +      PQ +  L    +  ++CG  H+ A+T  G +++WG
Sbjct: 55  GKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                 G LGH ++       ++   +   H+  I+ G +H   +T+ G L+ +G  S+G
Sbjct: 115 SNA--VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYG 172

Query: 382 ALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG G       +P  +++L G+    ++CG  H+ AV              +  G +F 
Sbjct: 173 QLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV--------------SKSGAIFG 218

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG  D   R +P  +  L    +  ++CG D SV LT  G V+T G+  +GQ
Sbjct: 219 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           LG    ++ +VP +V  E+  S + ++ACG  H  A   S  K+Y +G G  GQLG G  
Sbjct: 279 LGHGSCSNEIVPRKV-FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMV 337

Query: 559 DNRNSPTLV 567
            N ++P +V
Sbjct: 338 GNHSTPQIV 346



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 18/275 (6%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +Y WG+  +    LG   +    +PRK+  +     +  + CG  HT  +T  G ++  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWS-QADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 377 DGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           +   G LGH  D +    P+ + +L     T +SCG  H+ A+              T+ 
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLAL--------------TNW 107

Query: 436 GKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++F+WG    G+LGH  +  R   P  +  +  +++ Q+A G    +ALT +G +Y  G
Sbjct: 108 GQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 167

Query: 495 SAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           S +YGQLG+      VP   +   +A   +  +ACG  H  A++ +  ++ WGK   GQL
Sbjct: 168 SNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D ++R  PT +  L+   V+ + CG +F+  +
Sbjct: 228 GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFL 262



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 28/325 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           I+ WG  + G LG G   E  V  P+ ++      V  V CG  HT  +T+ G +Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIH---LSYISCGLWHTAVVTSAGHLFTFGDGS 379
              + G LGH       +P K    L  +    ++ ISCG  H+  +T+ G +F++G  +
Sbjct: 63  N--DHGQLGHDLDT---LPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNA 117

Query: 380 FGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  ++     PR ++ +      +++ G +H  A+              T+ G+L
Sbjct: 118 VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLAL--------------TNNGEL 163

Query: 439 FTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           + WG    G+LG G    ++  P  +  L    I  +ACG + S A++ SG ++  G   
Sbjct: 164 YAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNT 223

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+  +     PT++   +    V  ++CG      LT+   V+T G G  GQLGHG
Sbjct: 224 FGQLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG 282

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
              N   P  V  L   ++ ++ CG
Sbjct: 283 SCSNEIVPRKVFELMGSKITQIACG 307


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 175/367 (47%), Gaps = 27/367 (7%)

Query: 204 FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
           F WG  +       G+  +G +   QT   + K V +     V +I+CG  H  +V   G
Sbjct: 4   FCWGSSME------GQLGIGIT-GGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDG 56

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            ++  G  S G+LG  R      P  +  L  V ++ VACG+ HT AV+  G +  WG  
Sbjct: 57  TLYMCGANSKGQLGQDRNQ--YKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRN 114

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
                 L  G   +   PR +  +L       + CG  H+  +T  G LF++GD ++G L
Sbjct: 115 DRGQCGLATGDIENKPRPR-ILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQL 173

Query: 384 GHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           G G  ++  T  P E+ +LRG+   RV+CG +H+ A+ ++              G +F W
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTIS--------------GSVFGW 219

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G  D G+LG G+KE + +P  +  +  + +  +ACG D +  LT  G V+  G  + GQL
Sbjct: 220 GKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQL 279

Query: 502 GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKDN 560
           G       V  R   ++  S + +V CG +H   L  S  ++Y +G+G +GQLG  +  +
Sbjct: 280 GHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339

Query: 561 RNSPTLV 567
            ++P  V
Sbjct: 340 CSNPQRV 346



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 21/276 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGR--LGHGREADVSHPQLIEILSGVNVELVAC 303
           + ++ACG  H + V+ + ++  WG    G+  L  G   +   P+++  L+      V C
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCGLWH 362
           G  H+ A+TR G L++WGD TY  G LG G+ V+ +  R     +L G+ L  ++CG +H
Sbjct: 489 GSLHSMALTRDGRLFSWGDNTY--GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFH 546

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T +G +F +G    G LG G+  + S P  +  +R      ++CG  HTA +    
Sbjct: 547 SFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAML---- 602

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T+ G +F +G G +G+LGHG     + P  V  L+  +I QV CG   ++
Sbjct: 603 ----------TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTL 652

Query: 483 ALTTS-GHVYTMGSAAYGQLGVPVADGLV-PTRVDG 516
            L  S G +Y  G   +GQLG   A     P RV G
Sbjct: 653 VLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPG 688



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 18/278 (6%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L  V ++ VACG+ HT AV+    +  WG        L  G   +   PR +  +L    
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPR-ILRHLASYQ 482

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS--TSIPREVETLRGLRTTRVSC 410
              + CG  H+  +T  G LF++GD ++G LG G  ++  T  P E+ +LRG+   RV+C
Sbjct: 483 FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVAC 542

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G +H+ A+ ++              G +F WG  D G+LG G+KE + +P  +  +  + 
Sbjct: 543 GGFHSFALTIS--------------GSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQM 588

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           +  +ACG D +  LT  G V+  G  + GQLG       V  R   ++  S + +V CG 
Sbjct: 589 VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGK 648

Query: 531 YHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           +H   L  S  ++Y +G+G +GQLG  +  + ++P  V
Sbjct: 649 HHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 155/335 (46%), Gaps = 36/335 (10%)

Query: 266 FSWGEESGGRLGHGREADVSHPQL---IEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           F WG    G+LG G     +  ++   +  LSG  V+ ++CG++HT  V   G LY  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG- 381
            +   G LG       + P +VS  L+ + + +++CG  HT  V+  G +  +G    G 
Sbjct: 64  NS--KGQLGQDRNQ--YKPVQVSA-LETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118

Query: 382 -ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
             L  GD  +   PR ++ L   +  +V CG  H+ A+              T  G+LF+
Sbjct: 119 CGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMAL--------------TRDGRLFS 164

Query: 441 WGDGDKGRLGHG-------DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           WGD   G+LG G       D+   L      PL+     +VACG   S ALT SG V+  
Sbjct: 165 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLV-----RVACGGFHSFALTISGSVFGW 219

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           G    GQLG+   +      +   +    V+ +ACG  H A LT+   V+ +G+G+ GQL
Sbjct: 220 GKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQL 279

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GHG   N  +P  V  L    + +V CG + T ++
Sbjct: 280 GHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 181/412 (43%), Gaps = 59/412 (14%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG+         G+  +G   +  TD   P  + S   + +  +ACG  H+  +T
Sbjct: 160 GRLFSWGDNTY------GQLGIGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFALT 211

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+   G+LG G + + ++P L+  +    V+ +ACG+ HT  +T  G ++ +
Sbjct: 212 ISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 271

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT-SAGHLFTFGDGS 379
           G G+   G LGHGS  +   PRKV  +L G  ++ ++CG  HT V+  S G L+ FG G 
Sbjct: 272 GQGS--EGQLGHGSNYNEVNPRKVI-DLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 328

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  +  S S P+ V             G W   +   +T+ +SSS      C  ++
Sbjct: 329 HGQLGQDEARSCSNPQRVP------------GPWVPHS---STEKNSSSKGRVVRC--IY 371

Query: 440 TWG-----------DGDKGRLGHGDKEPRLFPECV---------------APLIDENICQ 473
             G           D  + +L   D   R+F +                   L    I  
Sbjct: 372 AGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKH 431

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD--GLVPTRVDGEIAESFVEEVACGAY 531
           VACG D ++A++    V   G    GQ G+   D       R+   +A     +V CG+ 
Sbjct: 432 VACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSL 491

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGD--KDNRNSPTLVDFLKDKQVKRVVCG 581
           H  ALT   ++++WG    GQLG G    +  + PT +  L+   + RV CG
Sbjct: 492 HSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 18/219 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEI 292
           P+ +    +     + CG+ H++ +T+ G +FSWG+ + G+LG G         P  +  
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 531

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L GV +  VACG +H+ A+T SG ++ WG    + G LG G+K +   P  +  N+    
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSVFGWGKN--DVGQLGLGNKENKSYPTLLR-NMRSQM 588

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + +I+CG  HTA++T+ G +F FG GS G LGHG + +   PR+V  L G   T+V+CG 
Sbjct: 589 VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGK 648

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            HT  +               S G+L+ +G G  G+LG 
Sbjct: 649 HHTLVL-------------EGSKGRLYAFGQGIHGQLGQ 674



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 172/418 (41%), Gaps = 59/418 (14%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA-VLV 259
           G VF++G+G + G LG G +          + + P+ V   M  D+  + CG  H  VL 
Sbjct: 266 GGVFLFGQG-SEGQLGHGSNY---------NEVNPRKVIDLMGSDITQVTCGKHHTLVLE 315

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLI----------EILSGVNVELVAC----GE 305
             +G ++++G+   G+LG       S+PQ +          E  S     +V C    G 
Sbjct: 316 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGH 375

Query: 306 YHTCAVTRSGD------LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           +     T + D      L+          L                  L+ + + +++CG
Sbjct: 376 HCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACG 435

Query: 360 LWHTAVVTSAGHLFTFGDGSFG--ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
             HT  V+    +  +G    G   L  GD  +   PR +  L   +  +V CG  H+ A
Sbjct: 436 DDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMA 495

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-------DKEPRLFPECVAPLIDEN 470
           +              T  G+LF+WGD   G+LG G       D+   L      PL+   
Sbjct: 496 L--------------TRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLV--- 538

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
             +VACG   S ALT SG V+  G    GQLG+   +      +   +    V+ +ACG 
Sbjct: 539 --RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQ 596

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H A LT+   V+ +G+G+ GQLGHG   N  +P  V  L    + +V CG + T ++
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 12/198 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG+         G+  +G   +  TD   P  + S   + +  +ACG  H+  +T
Sbjct: 500 GRLFSWGDNTY------GQLGIGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFALT 551

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+   G+LG G + + S+P L+  +    V+ +ACG+ HT  +T  G ++ +
Sbjct: 552 ISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 611

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT-SAGHLFTFGDGS 379
           G G+   G LGHGS  +   PRKV  +L G  ++ ++CG  HT V+  S G L+ FG G 
Sbjct: 612 GQGS--EGQLGHGSNYNEVNPRKVI-DLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 668

Query: 380 FGALGHGDHISTSIPREV 397
            G LG  +  S S P+ V
Sbjct: 669 HGQLGQDEARSCSNPQRV 686


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 159/348 (45%), Gaps = 32/348 (9%)

Query: 202 DVFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           +++ WG  +     LGG E           + L+P+ ++   A  V  IACG  H VL+T
Sbjct: 27  NMYCWGSTVYGELGLGGIEDE---------NILMPRELDFQKATAVEQIACGETHTVLIT 77

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K GE+FS G    G+LGH  E      Q+I  L     +  ACG  H+ AV   G L+ W
Sbjct: 78  KDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCW 135

Query: 321 GDGTYNSGLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           G      G LG G+ ++    PR V      I +  I+CG  HT  +T+ G L+ +G  S
Sbjct: 136 GSNA--DGQLGLGTPLTIAHTPRMVKALGTSIVVQ-IACGKKHTLALTNNGELYAWGSNS 192

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G  +     P+ +  L  +    ++CG +H+  V              +  G +
Sbjct: 193 DGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVV--------------SKSGAV 238

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F WG    G+LG  D   +  P  +  L +  +  VACG + SV LT  G V+T G+  Y
Sbjct: 239 FGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMY 298

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTW 545
           GQLG       +  R   E+  S V +++CG  H  AL  S  KVY W
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 157/331 (47%), Gaps = 29/331 (8%)

Query: 258 LVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           L+     ++ WG    G LG G   + ++  P+ ++      VE +ACGE HT  +T+ G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 316 DLYTWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           ++++ G+   +SG LGH   +K    IP      LD       +CG  H+  V + G LF
Sbjct: 81  EVFSCGNN--DSGQLGHEKPTKRLQMIP-----GLDAFIFKQAACGASHSVAVNNWGQLF 133

Query: 374 TFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            +G  + G LG G  ++ +  PR V+ L      +++CG  HT A+              
Sbjct: 134 CWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLAL-------------- 179

Query: 433 TSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
           T+ G+L+ WG    G+LG G D +    P+ +  L    I  +ACG   S+ ++ SG V+
Sbjct: 180 TNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVF 239

Query: 492 TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
             G   +GQLG+  ++D  VP  +   +  + V+ VACG      LT    V+T G G  
Sbjct: 240 GWGRNTFGQLGMNDISDKYVPCLLK-TLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMY 298

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           GQLGHG   N   P  +  L    V ++ CG
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSVVTQISCG 329



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 25/285 (8%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           +    ++Y WG   Y    LG     +  +PR++        +  I+CG  HT ++T  G
Sbjct: 22  IPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQ-KATAVEQIACGETHTVLITKDG 80

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            +F+ G+   G LGH     T   + +  L      + +CG  H+ AV            
Sbjct: 81  EVFSCGNNDSGQLGHEK--PTKRLQMIPGLDAFIFKQAACGASHSVAV------------ 126

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLF---PECVAPLIDENICQVACGHDLSVALTTS 487
              + G+LF WG    G+LG G   P      P  V  L    + Q+ACG   ++ALT +
Sbjct: 127 --NNWGQLFCWGSNADGQLGLGT--PLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNN 182

Query: 488 GHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           G +Y  GS + GQLG+   V     P  + G +A   +  +ACG YH   ++ +  V+ W
Sbjct: 183 GELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIPIAFIACGGYHSIVVSKSGAVFGW 241

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           G+   GQLG  D  ++  P L+  L++ +VK V CG  F+  + +
Sbjct: 242 GRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTM 286



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 129/276 (46%), Gaps = 27/276 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG   ++G LG     +G     +T    PK +     + +  IACG  H+++V+
Sbjct: 183 GELYAWGSN-SDGQLG-----LGQDVKIETR---PKLITGLATIPIAFIACGGYHSIVVS 233

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G +F WG  + G+LG    +D   P L++ L    V+ VACGE  +  +T  G ++T 
Sbjct: 234 KSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTC 293

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G Y  G LGHG+  +  +PR++   L G  ++ ISCG  HT A+V S G ++ +G   
Sbjct: 294 GAGMY--GQLGHGANSNEILPRQII-ELMGSVVTQISCGKRHTLALVPSRGKVYAWGL-- 348

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
                       S     +T R + T ++  G W +    +A +  S+S S S  C    
Sbjct: 349 ----------GGSGQLGSQTARSVATPQMVLGPWSSKNRSLAMEVDSAS-STSEDCVVKH 397

Query: 440 TWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQV 474
            +  GD        KE  + P +C   L D  I  +
Sbjct: 398 IFSGGDHCFATVTQKEDNIEPDDCRIYLPDTQILSI 433


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 174/388 (44%), Gaps = 43/388 (11%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V++WG     G LG      G S         P    ++ ++ + +IACG  H   + + 
Sbjct: 36  VYVWGSDTY-GQLGLASREFGKS--------CPSPRFTSFSVVIEDIACGEEHTSFIAQN 86

Query: 263 GEIFSWGEESGGRLGHGREADV--SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G ++S G  + G+LG   +     S P L+E L G     ++CG YHT  V  +G L+TW
Sbjct: 87  GYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTW 146

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G      G LG G   +   P+ V  +L      ++SCG  +T V+T    +F FGDG  
Sbjct: 147 GQNC--EGQLGIGKSDNMTTPQIV--DLKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKC 202

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G+  +   PR+++ ++      +SCG  HT  +                 G+ F+
Sbjct: 203 GQLGLGNECNEYKPRQLQ-IQMQNIVAISCGDRHTLFL--------------NEEGEAFS 247

Query: 441 WGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQV-ACGHDLSVALTTSGHVYTMGSAAY 498
            G+    +LG   + +    P  V         +V A    +S AL++ G++Y  G+  +
Sbjct: 248 CGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFF 307

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GQ          PTR   E A   + ++  G   +  L    KVY+WG    G+LG G  
Sbjct: 308 GQFD-------RPTRC--EFAPKDLLDICIGNQFICLLDGEGKVYSWGSNMFGELGQGIA 358

Query: 559 DNRNS--PTLVDFLKDKQVKRVVCGLNF 584
           + + +  P  VD +KDK VKR+ CG NF
Sbjct: 359 NGQQALEPIQVDKIKDKNVKRLYCGANF 386



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 162/338 (47%), Gaps = 34/338 (10%)

Query: 204 FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
           FI   G         + ++G S         P  VE         I+CGA H   V   G
Sbjct: 82  FIAQNGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNG 141

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           ++F+WG+   G+LG G+  +++ PQ++++ + + V  V+CG+ +T  +T++  ++ +GDG
Sbjct: 142 QLFTWGQNCEGQLGIGKSDNMTTPQIVDLKNNLAV-FVSCGKRNTMVITQTQKIFGFGDG 200

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
               G LG G++ + + PR++   +  I    ISCG  HT  +   G  F+ G+ ++  L
Sbjct: 201 K--CGQLGLGNECNEYKPRQLQIQMQNIVA--ISCGDRHTLFLNEEGEAFSCGNNTYNQL 256

Query: 384 GHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G  ++  S++IP +V+    L+  +V       +A +             +S G L+ WG
Sbjct: 257 GCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAAL-------------SSEGYLYLWG 303

Query: 443 DGDKGRLGHGDKEPRLFPEC-VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
               G  G  D+  R    C  AP   +++  +  G+     L   G VY+ GS  +G+L
Sbjct: 304 ---TGFFGQFDRPTR----CEFAP---KDLLDICIGNQFICLLDGEGKVYSWGSNMFGEL 353

Query: 502 GVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAAL 536
           G  +A+G   L P +VD +I +  V+ + CGA  V A+
Sbjct: 354 GQGIANGQQALEPIQVD-KIKDKNVKRLYCGANFVFAM 390



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 438 LFTWGDGDKGRLGHGDKE-------PRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
           ++ WG    G+LG   +E       PR     V       I  +ACG + +  +  +G+V
Sbjct: 36  VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVV------IEDIACGEEHTSFIAQNGYV 89

Query: 491 YTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           Y+MG+   GQLGV V +      PT V+G      V+ ++CGAYH A +    +++TWG+
Sbjct: 90  YSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQ-ISCGAYHTATVCDNGQLFTWGQ 148

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              GQLG G  DN  +P +VD LK+     V CG   T +I
Sbjct: 149 NCEGQLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVI 188



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 17/110 (15%)

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAES--------FVEEVACGAYHVAALTSTSK 541
           VY  GS  YGQLG+        +R  G+   S         +E++ACG  H + +     
Sbjct: 36  VYVWGSDTYGQLGLA-------SREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGY 88

Query: 542 VYTWGKGANGQLGHGDKDN--RNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           VY+ G    GQLG    ++  +++PTLV+ LK  +  ++ CG   TA +C
Sbjct: 89  VYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVC 138


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P  +  T    V  +ACG RH + +T  G++++ G     +LGH  E     P LI  
Sbjct: 29  LTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGH--ELPTKRPLLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    V  ++CG  H+ A++  G + +WGD   + G LGH +        KV   L    
Sbjct: 87  LQDYVVIQISCGSRHSLALSEWGQVLSWGDN--DCGQLGHATDKEIVQLPKVVRQLVSKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 158/305 (51%), Gaps = 27/305 (8%)

Query: 216 GGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGG 274
           G  +H ++G+    +   L+P+  +      V  I+CG+RH++ +++ G++ SWG+   G
Sbjct: 65  GSNDHSQLGHELPTKRPLLIPELQDYV----VIQISCGSRHSLALSEWGQVLSWGDNDCG 120

Query: 275 RLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           +LGH  + ++   P+++  L    V  +ACG  H+ A+T  G+LY+WG   Y  G LG  
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY--GQLGVN 178

Query: 334 SK---VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           S      C  P +++  L GI L+ I+CG  H+ +++ +G +F +G  + G LG  D  +
Sbjct: 179 SPKDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEAN 237

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            + P +++TLR L    V+CG   +  +              T+ G +FT G G  G+LG
Sbjct: 238 RAYPTQLKTLRTLGVRFVACGDEFSVFL--------------TNEGGVFTCGAGAYGQLG 283

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLGVPVADGL 509
           HG     + P  V  L+   I QVACG+  ++AL  S G VY  G  + GQLG      L
Sbjct: 284 HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343

Query: 510 VPTRV 514
           +  +V
Sbjct: 344 MLPQV 348



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         P ++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTANGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G      LGH   + T  P  +  L+     ++SCG  H+ A+              +  
Sbjct: 65  GSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLAL--------------SEW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  DKE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV     L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 228 GQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 150/329 (45%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 322 DGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              ++   LGH   +K    IP      L    +  ISCG  H+  ++  G + ++GD  
Sbjct: 66  SNDHSQ--LGHELPTKRPLLIPE-----LQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P+    C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLG--VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+   A+   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDEANRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P+++     ++ V++VACG  H   LT+  
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPW-TPDTAVQQVACGHRHTLFLTANG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G   + QLGH     R  P L+  L+D  V ++ CG
Sbjct: 60  KVYACGSNDHSQLGHELPTKR--PLLIPELQDYVVIQISCG 98



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 311

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G ++++G  S G+LG      +  PQ++
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 28/333 (8%)

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G +++WG    G+LG G + D S PQ+ + +        A G   T A+T+ G L+T+G 
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 323 GTYNSGLLGHGSKVSC---WIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGD 377
           G  N   LGHG    C    +PR+V    DG  LS ++C +   H A VT  G ++T+G 
Sbjct: 74  GDSNQ--LGHGDTGDCSNQVLPREVEDAFDG--LSVVNCSICDGHMAAVTEDGSVWTWGR 129

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G+FG LGH  H  T IP +V  L G+R  +V+CG  HT A+              T  G+
Sbjct: 130 GTFGRLGHEVH-ETGIPEKVPGLDGMRFVKVACGHVHTLAL--------------TDDGR 174

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F WG+   G +G  D+     P+ +  L  + I  ++ G + S AL+    VYT G+  
Sbjct: 175 VFAWGNNKTGCVGVSDR-GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADN 233

Query: 498 YGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
           YGQLG+      +  PTR+   +    + ++ACG YH+ AL++  +VY WG+G  GQ  +
Sbjct: 234 YGQLGLGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTAN 292

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             K + N P ++D LK+ +VK +  G + +A++
Sbjct: 293 EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVV 325



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 168/358 (46%), Gaps = 46/358 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG G   G LG            Q D  LP+     +A ++ N  C    A   T
Sbjct: 14  GYLYTWGSG-QFGQLG---------IGTQNDESLPQ-----IAKEIDNEICTFTAAGANT 58

Query: 261 -----KQGEIFSWGEESGGRLGHGREADVSH---PQLIE-ILSGVNVELVACGEYHTCAV 311
                + G ++++G+    +LGHG   D S+   P+ +E    G++V   +  + H  AV
Sbjct: 59  TAAITQGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAV 118

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T  G ++TWG GT+  G LGH    +  IP KV G LDG+    ++CG  HT  +T  G 
Sbjct: 119 TEDGSVWTWGRGTF--GRLGHEVHETG-IPEKVPG-LDGMRFVKVACGHVHTLALTDDGR 174

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           +F +G+   G +G  D   T  P+E+E+LRG +   +S G+  +AA+    +        
Sbjct: 175 VFAWGNNKTGCVGVSDR-GTCAPQEIESLRGKKIIDISAGMESSAALSAEHE-------- 225

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHV 490
                 ++TWG  + G+LG G     +  P  +  L +  I Q+ACG    +AL+ +G V
Sbjct: 226 ------VYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEV 279

Query: 491 YTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           Y  G    GQ       D  +P  +D  + ES V+ +A G  H A +    +++T G+
Sbjct: 280 YAWGQGLQGQTANEKKVDTNIPHVIDA-LKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 158/297 (53%), Gaps = 32/297 (10%)

Query: 203 VFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           VF+WG    +  G L G + +V            P   E+  AL+V  +A G++    VT
Sbjct: 428 VFVWGLNDKDQLGGLKGSKIKV------------PSFSETLSALNVVQVAGGSKSLFAVT 475

Query: 261 KQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDL 317
            +G++++ GE + GRLG G     V  P+ I  LS   V+ VA   G  H  A+T  G +
Sbjct: 476 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 535

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           ++WG+G  + G LGH S+++C  PR +   L    +  I+CG  H+A +TS+G L+T+G 
Sbjct: 536 FSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 592

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD            G 
Sbjct: 593 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE-----------GL 640

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+T G
Sbjct: 641 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 697



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 24/295 (8%)

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T + ++F WG     +LG  + + +  P   E LS +NV  VA G     AVT  G +Y 
Sbjct: 423 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 482

Query: 320 WGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFG 376
            G+ T  +G LG G S  +  IPR+++  L    +  ++   G  H   +T  G +F++G
Sbjct: 483 CGEAT--NGRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +G  G LGH   ++   PR +E L+  R   ++CG  H+AA+              TS G
Sbjct: 540 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL--------------TSSG 585

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHGD   +L P+ V  L+   + QVACG     ++ALT  G V++ G
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 645

Query: 495 SAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
              +G+LG   ++G  +P  ++  +    V ++ CGA    ALT +  V+TWGKG
Sbjct: 646 DGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 124/251 (49%), Gaps = 29/251 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+  GE   NG LG G         RQ  AL    V+    + VH+   G RHA  +T
Sbjct: 478 GKVYACGEA-TNGRLGLGISSGTVPIPRQITALSSYVVKK---VAVHS---GGRHATALT 530

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++FSWGE   G+LGH    +   P+LIE L    +  +ACG  H+ A+T SG+LYTW
Sbjct: 531 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 590

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHLFTFGDG 378
           G G Y  G LGHG   +   P+ V   L G  +  ++CG     T  +T  G +F++GDG
Sbjct: 591 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 647

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     +IP+ +E L G    ++ CG   + A+              T  G +
Sbjct: 648 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL--------------TKSGVV 693

Query: 439 FTWGDGDKGRL 449
           +TWG   KGRL
Sbjct: 694 WTWG---KGRL 701



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 18/213 (8%)

Query: 172 SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           +A  ++ +   +V S   H +A       G VF WGEG  +G LG         FSR  +
Sbjct: 507 TALSSYVVKKVAVHSGGRHATA---LTVDGKVFSWGEG-DDGKLG--------HFSRM-N 553

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
              P+ +E+     + +IACG+ H+  +T  GE+++WG    GRLGHG       P++++
Sbjct: 554 CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 613

Query: 292 ILSGVNVELVACG--EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +L G  V  VACG  +  T A+T  G +++WGDG +  G LG G    C IP+ +   L+
Sbjct: 614 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF--GKLGRGGSEGCNIPQNIE-RLN 670

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G  +  I CG   +  +T +G ++T+G G   A
Sbjct: 671 GQGVCQIECGAQFSLALTKSGVVWTWGKGRLKA 703



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 22/281 (7%)

Query: 310 AVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           A T    ++ WG  D     GL G   KV  +     S  L  +++  ++ G      VT
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 475

Query: 368 SAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             G ++  G+ + G LG G    T  IPR++  L      +V            A  S  
Sbjct: 476 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKV------------AVHSGG 523

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
              +  T  GK+F+WG+GD G+LGH  +     P  +  L  + I  +ACG   S ALT+
Sbjct: 524 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS 583

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY--HVAALTSTSKVYT 544
           SG +YT G   YG+LG       +  ++   +    V +VACG+      ALT    V++
Sbjct: 584 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 643

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           WG G  G+LG G  +  N P  ++ L  + V ++ CG  F+
Sbjct: 644 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 684



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           K+F WG  DK +LG         P     L   N+ QVA G     A+T  G VY  G A
Sbjct: 427 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 486

Query: 497 AYGQLGVPVADGLVPT-RVDGEIAESFVEEVAC--GAYHVAALTSTSKVYTWGKGANGQL 553
             G+LG+ ++ G VP  R    ++   V++VA   G  H  ALT   KV++WG+G +G+L
Sbjct: 487 TNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 546

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           GH  + N + P L++ LK K+++ + CG + +A +     L+ W
Sbjct: 547 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 590


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 170/344 (49%), Gaps = 21/344 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG- 304
           V +I  G      V   G + + G+ S GRLG+G  A  S P LIE  + V   L + G 
Sbjct: 163 VMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGS 222

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A+ ++G ++TWGDG Y  G LGHG   +   P+ +   L    +    CG  H+A
Sbjct: 223 DGHSMAIGKNGQIWTWGDGDY--GKLGHGDSTTQKSPKLIEA-LASRVIVDADCGHRHSA 279

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            V  AGHL+ +G+G +G LG GD +  S+P +V  +R    ++V CG  HT  VV++TD 
Sbjct: 280 AVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGFNHT--VVLSTDG 335

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            +           ++++G  + G+LGHGD   +  P+ +  L    I Q+A G  +S A+
Sbjct: 336 RT-----------VWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G +Y  G       G      ++P  V G ++   V ++A G  HV ALT    V+T
Sbjct: 385 TREGALYVWGFGPCLGNGSSDETFMLPKVVRG-LSGRVVIDIAIGENHVVALTKDGLVFT 443

Query: 545 WGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           WG   NGQ G G       SP +V  L    +++V  G   T +
Sbjct: 444 WGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 127/249 (51%), Gaps = 32/249 (12%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE---TLRGLRTTRVSCGV 412
           I+ G + T  V S G +   G GS+G LG+G   S+S P  +E    +R + T++ S G 
Sbjct: 166 ITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG- 224

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+                 G+++TWGDGD G+LGHGD   +  P+ +  L    I 
Sbjct: 225 -HSMAI--------------GKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIV 269

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACG 529
              CGH  S A+  +GH+Y  G   YG+LG  + D L   VP +V  +I E+   +V CG
Sbjct: 270 DADCGHRHSAAVCDAGHLYMWGEGDYGRLG--LGDALQRSVPVQVP-DIREA--SQVVCG 324

Query: 530 AYHVAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H   L++  + V+++G   NG+LGHGD + +  P ++D L+   + ++  G   +A +
Sbjct: 325 FNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384

Query: 589 ----CLHKW 593
                L+ W
Sbjct: 385 TREGALYVW 393



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 118/279 (42%), Gaps = 32/279 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+G   G LG G+     S         PK +E+  +  + +  CG RH+  V 
Sbjct: 233 GQIWTWGDG-DYGKLGHGDSTTQKS---------PKLIEALASRVIVDADCGHRHSAAVC 282

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G ++ WGE   GRLG G     S P  +++        V CG  HT  ++  G    W
Sbjct: 283 DAGHLYMWGEGDYGRLGLGDALQRSVP--VQVPDIREASQVVCGFNHTVVLSTDGRT-VW 339

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             G   +G LGHG     + P+ +   L G+ ++ I+ G   +A VT  G L+ +G G  
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGP- 397

Query: 381 GALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             LG+G    T  +P+ V  L G     ++ G  H  A+              T  G +F
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVAL--------------TKDGLVF 442

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACG 477
           TWG+   G+ G G        P+ V  L    I QV  G
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAG 481



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 43/206 (20%)

Query: 414 HTAAVVVATDSSSSSPSGSTSCG-----KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLI 467
            +A  ++++ +++S   G T+ G     ++F WG     +L     E +L +P  ++  +
Sbjct: 102 QSALTILSSIAAASCNDGGTNGGPSFADEVFCWGSNSSQQLTDATPEDKLLYPRNLS--V 159

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----------------VPVADGLVP 511
              +  +  G   + A+ ++G V   G  +YG+LG                 PV   L  
Sbjct: 160 YGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTS 219

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
              DG               H  A+    +++TWG G  G+LGHGD   + SP L++ L 
Sbjct: 220 KGSDG---------------HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALA 264

Query: 572 DKQVKRVVCGLNFTAIIC----LHKW 593
            + +    CG   +A +C    L+ W
Sbjct: 265 SRVIVDADCGHRHSAAVCDAGHLYMW 290



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +++WG G     LG G        S     +LPK V       V +IA G  H V +T
Sbjct: 388 GALYVWGFGPC---LGNG--------SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALT 436

Query: 261 KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHT 308
           K G +F+WG    G+ G G   A  + PQ+++ L G  ++ V  G  HT
Sbjct: 437 KDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 169/342 (49%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H  LVT+ G++F +G  + G+LG G +  V+ P  ++ L    V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHG---SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
              T  G+LY  G    N G LG G    + S  +      N  G  +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFF--NKQGP-IKMLAAGSNTSAA 155

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G L+ +GD S G +G G   +   P+EV    G R   VSCG +H+A V V     
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVD---- 209

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVA 483
                     G L+T+G+ D G+LG   ++      P+ V  + D  + QVACG   +VA
Sbjct: 210 ----------GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258

Query: 484 LTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           LT +  VY+ G   +GQL  G  + +  +P RV     +  V+  ACG  H A +T    
Sbjct: 259 LTEN-EVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALITDNGL 316

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G+++  N+  PTL     D  V  V CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 27/294 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G L+ +G  + N G LG G+K +   P  V   L    +   +CG 
Sbjct: 41  ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V TS G+L+  G  + G LG GD                RT+      ++    + 
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+L+ WGD  +G++G G +   L P+ V+  + + +  V+CG+  
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+    +A+  VP +V  +I +  V+ VACG  H  ALT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQV-TDIPDRVVQ-VACGGGHTVALT 260

Query: 538 STSKVYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             ++VY++G G  GQLGHG    ++R  P +V+  +  +VK   CG N TA+I 
Sbjct: 261 E-NEVYSFGLGQFGQLGHGTFIFESR-LPRVVEHFRKGRVKHAACGENHTALIT 312



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 39/314 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T +G +++ G  + G+LG G   D +   L+E  +
Sbjct: 79  PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFN 138

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               ++++A G   + A+T+ G LY WGD +   G +G G + +   P++VS    G  +
Sbjct: 139 KQGPIKMLAAGSNTSAALTQDGRLYMWGDNS--EGQIGLGKESNALTPQEVSV---GKRV 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETLRGLRTTR 407
            ++SCG +H+A VT  G L+TFG+   G LG    +ST       +P++V  +   R  +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFGEKDSGKLG----LSTEKLANHKVPQQVTDIPD-RVVQ 248

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAP 465
           V+CG  HT A+                  +++++G G  G+LGHG    E RL P  V  
Sbjct: 249 VACGGGHTVALTE---------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVVEH 292

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESF 522
                +   ACG + +  +T +G +YT G   +G+LG+      +   PT       +  
Sbjct: 293 FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP-RFLDYH 351

Query: 523 VEEVACGAYHVAAL 536
           V  V CG  H+  L
Sbjct: 352 VHSVTCGGCHMLVL 365



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 37/231 (16%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +  +G +FTFG   F         +   +P            R+SCG  HTA V      
Sbjct: 9   IPESGAVFTFGKSKFADNAPSKFWLKNDVP-----------LRISCGDEHTALV------ 51

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T  GKLF +G  + G+LG G K     P CV  L  E +   ACG   ++  
Sbjct: 52  --------TENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTST 539
           T+ G++Y  G    GQLG+    G    R    + E F     ++ +A G+   AALT  
Sbjct: 104 TSRGNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQD 159

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            ++Y WG  + GQ+G G + N  +P  V     K+V  V CG   +A + +
Sbjct: 160 GRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQ 288
           ++ LP+ VE      V + ACG  H  L+T  G ++++G+   G+LG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 289 LIEILSGVNVELVACGEYHTCAVTR 313
           L       +V  V CG  H   + +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVLAK 367


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 178/387 (45%), Gaps = 37/387 (9%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            D  LP  +     + + ++ACG      + + G++F+ G    G+ G G  + V   +L
Sbjct: 30  VDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRL 89

Query: 290 IEILSGVNVELV--ACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSG 346
           +  L   ++  +  A G  H  A++RSG LYT+G   +NS G LGHGS      P K+  
Sbjct: 90  VPALVTEDIAHIRSANGCEHLTAISRSGALYTFG---FNSRGQLGHGSTNPITTPTKIK- 145

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
           +L   H+  ++C  +HT V+T  G L+ FG    G LG  D +   +P  +         
Sbjct: 146 DLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVL 205

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-----DKEPRLFPE 461
            V+CG  HT                S + G +  +G  D G+LG G        P L   
Sbjct: 206 AVACGQHHTVV--------------SLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLL-- 249

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES 521
             APL    +  +ACG+  ++AL   G VY+ G   YGQLG      L    +   +A++
Sbjct: 250 -AAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKT 308

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              +V CG YH   L+   KVY +G+  +GQLG G+  +  SP ++  L+DK V +V  G
Sbjct: 309 HAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASG 368

Query: 582 LNFTAIICLHKWVSSV------DHSVC 602
             F   ICL    +SV       H++C
Sbjct: 369 --FYHSICLTATKNSVGSRMDTSHTLC 393



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 162/379 (42%), Gaps = 42/379 (11%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           +S+G+ S G L H    D + P  I     V +  VACG   T  +  +GD++T G   Y
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCG---Y 70

Query: 326 N-SGLLGHGSKVSC----WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           N SG  G GS         +P  V+ ++  I  +    G  H   ++ +G L+TFG  S 
Sbjct: 71  NDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSAN---GCEHLTAISRSGALYTFGFNSR 127

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHG     + P +++ L       V+C  +HT  + +               G L+ 
Sbjct: 128 GQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTME--------------GTLYA 173

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           +G  D G+LG  D   R  P  +       +  VACG   +V   T+G V   G   +GQ
Sbjct: 174 FGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQ 233

Query: 501 LGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           LG    +     P+ +   +    V  +ACG YH  AL     VY++G+   GQLGHG +
Sbjct: 234 LGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHR 293

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNC 618
            + + PTL+  L      +V CG       C H  V S D  V      PFG  R  H  
Sbjct: 294 HHLSEPTLIKALAKTHAVQVTCG-------CYHTLVLSEDGKV-----YPFG--RNNHGQ 339

Query: 619 YNCG-LVFCKACSSRKSLK 636
              G L+ C +     SL+
Sbjct: 340 LGLGNLIDCTSPQIIASLR 358



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 7/152 (4%)

Query: 218 GEHRVGYSFSRQ-TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL 276
           G+   GY+     + +LL   ++S   L V ++ACG  H + + + G ++S+G    G+L
Sbjct: 232 GQLGTGYTLDYHASPSLLAAPLDS---LVVPSLACGYYHTIALAEHGSVYSFGRNDYGQL 288

Query: 277 GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV 336
           GHG    +S P LI+ L+  +   V CG YHT  ++  G +Y +G    N G LG G+ +
Sbjct: 289 GHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRN--NHGQLGLGNLI 346

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            C  P+ ++   D   +  ++ G +H+  +T+
Sbjct: 347 DCTSPQIIASLRDKF-VVKVASGFYHSICLTA 377


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 155/299 (51%), Gaps = 28/299 (9%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVN-VELVACGE 305
            ++CG  H  L+++ GE+F+WG+   G+LGHG +     + P+ +E   G + + +V CG 
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H+  V     +Y+WG   +  G LGHG+K       K+  ++ G  +  I+ G  HT V
Sbjct: 1283 EHSICVDSDYVVYSWGQDKF--GQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIV 1340

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVE--TLRGL-----RTTRVSCGVWHTAAV 418
            +  +G L++FG G  G LGHG  +S SIP  +E  T+ G+     + T+++CG  H+   
Sbjct: 1341 LKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHS--- 1397

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
            V+ +D+           G++++WG G +G+LGHG+ E    P  +  L  + + +++CGH
Sbjct: 1398 VICSDN-----------GEVYSWGLGKQGQLGHGNYESIARPRLIEAL--KGVTKISCGH 1444

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
              ++A T   +VY+ G   + +LG          RV     +  V ++ CG  H   LT
Sbjct: 1445 FYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 36/302 (11%)

Query: 301  VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW--IPRKVSGNLDGIHLSYISC 358
            V+CG  H   ++ SG+L+TWG     SG LGHG  +      P+++        +  + C
Sbjct: 1223 VSCGWDHVALISESGELFTWGKN--QSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  H+  V S   ++++G   FG LGHG   +S + P+ +E + G +   ++ G  HT  
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIV 1340

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN------- 470
            +                 G+L+++G GD+G+LGHG        + +   I+ N       
Sbjct: 1341 L--------------KKSGELYSFGYGDQGQLGHGS----FVSKSIPTRIELNTIVGIQH 1382

Query: 471  ----ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
                I Q+ACG   SV  + +G VY+ G    GQLG    + +   R+   +    V ++
Sbjct: 1383 GGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKI 1440

Query: 527  ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            +CG ++  A T    VY+WG G + +LGHG   N  +P +VDF   K V ++VCGLN T 
Sbjct: 1441 SCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTI 1500

Query: 587  II 588
             +
Sbjct: 1501 TL 1502



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 66/364 (18%)

Query: 203  VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
            V+ WG+    G LG G   V  +         PK +E      +  IA G  H +++ K 
Sbjct: 1294 VYSWGQD-KFGQLGHGTKSVSQN--------RPKIIEDISGQKIQAIAAGFAHTIVLKKS 1344

Query: 263  GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE-------LVACGEYHTCAVTRSG 315
            GE++S+G    G+LGHG     S P  IE+ + V ++        +ACG  H+   + +G
Sbjct: 1345 GELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNG 1404

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            ++Y+WG G    G LGHG+  S   PR +   L G+  + ISCG ++T   T   +++++
Sbjct: 1405 EVYSWGLG--KQGQLGHGNYESIARPRLIEA-LKGV--TKISCGHFYTMATTDLKNVYSW 1459

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG---- 431
            G G    LGHG   + + PR V+       +++ CG+ HT  +    D +++S S     
Sbjct: 1460 GLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDV 1519

Query: 432  -----------------------------------STSCGKLFTWGDGDKGRLGH-GDKE 455
                                               ++    ++  G G+ G+LG  GD +
Sbjct: 1520 NDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLK 1579

Query: 456  PRLF----PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLV 510
               F    P  +  +   N+  ++CG D +  +T++G +Y  G   +GQ+G     D  V
Sbjct: 1580 SPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWV 1639

Query: 511  PTRV 514
            P R+
Sbjct: 1640 PIRI 1643



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 5/139 (3%)

Query: 455  EPRLFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--- 510
            +P L    + PL +E    +V+CG D    ++ SG ++T G    GQLG  +  G +   
Sbjct: 1203 DPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTT 1262

Query: 511  PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD-NRNSPTLVDF 569
            P R++    +S +  V CG  H   + S   VY+WG+   GQLGHG K  ++N P +++ 
Sbjct: 1263 PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIED 1322

Query: 570  LKDKQVKRVVCGLNFTAII 588
            +  ++++ +  G   T ++
Sbjct: 1323 ISGQKIQAIAAGFAHTIVL 1341


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 179/359 (49%), Gaps = 33/359 (9%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++  + G + ++          L PK   S    D   I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPSFS--DAQTIEAGQYCTFVIST 420

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + + G+ S GRLG G   + S  + +      +++ V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT  G L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LGHGD  S +IP  V+ +  +    VSCG  HT A+         S  G T    +
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNV--GEVSCGSSHTIAL---------SKDGRT----V 583

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G VY  G  A 
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              G   A  L P  ++ E+A + + +++ G  H  +L+  ++VY WG  + GQ G G+
Sbjct: 644 LGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN 701



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 31/333 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           A +V++  E++ WG  S  +L  G +  +  P+L    S  + + +  G+Y T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 422

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVS----GNLDGIHLSYISCGLWHTAVVTSAGH 371
            +   G G+Y  G LG G   +    +K++     ++  +  S  S G  HT   T+ G 
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGE 478

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+  +   P+ ++  L+G     VS G  H+AAV            
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV------------ 526

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH- 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V+CG   ++AL+  G  
Sbjct: 527 --TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRT 582

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V++ G    G+LG    + +   +V   +   F+ +V  G+    ALTST +VY WG GA
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 550 NGQLGHGDKDNRN-SPTLVDFLKDKQVKRVVCG 581
              LG G  +     P L++ L   ++  +  G
Sbjct: 643 C--LGCGSSEATALRPKLIEELAATRIVDISIG 673



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 33/325 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHED--FDSLGDVFIWGEGIANGFLGGGEHRV 222
           D++N  +    TF    S    SSS GS      F + G+VF WG+G   G LG G    
Sbjct: 439 DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG-DYGKLGHGN--- 494

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
             S +++   L+   ++  +   V  ++ G RH+  VT+ GE+++WGE   GRLGHG   
Sbjct: 495 --SSTQKYPKLIQGPLQGKV---VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
             + P L++ +S  NV  V+CG  HT A+++ G    W  G  ++G LGHG     + P+
Sbjct: 550 SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPK 606

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
            +   L G+ +  +  G   +  +TS G ++ +G G+   LG G   +T++ P+ +E L 
Sbjct: 607 VIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--CLGCGSSEATALRPKLIEELA 663

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFP 460
             R   +S G  H  ++              +   +++ WG+   G+ G G+   P   P
Sbjct: 664 ATRIVDISIGDSHCLSL--------------SHDNEVYAWGNNSMGQCGQGNSTGPITKP 709

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
           + V+ L    I Q++ G   S+A T
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWT 734



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +V+    ++ +G  S   L  G       P+   +    +T  +  G + T   V++TD 
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCT--FVISTDG 422

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHD 479
           S  +      CGK      G  GRLG GD   +   + +      +I +V+      GH 
Sbjct: 423 SVRA------CGK------GSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHT 470

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L  A TT G V++ G   YG+LG    +    P  + G +    V  V+ G  H AA+T 
Sbjct: 471 L--AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             ++YTWG+G  G+LGHGD ++RN PTLV  + +  V  V CG + T
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHT 573



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           S V   S GS+H    S     +W  G   NG LG G+    Y          PK +E+ 
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK---------PKVIEAL 611

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
             + +  +  G++ ++ +T  G++++WG   G  LG G  EA    P+LIE L+   +  
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVD 669

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCG 359
           ++ G+ H  +++   ++Y WG+ +   G  G G+       P+KVSG LDGI +  IS G
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSM--GQCGQGNSTGPITKPKKVSG-LDGIAIQQISAG 726

Query: 360 LWHTAVVTS 368
             H+   T+
Sbjct: 727 TSHSLAWTA 735


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 30/369 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG+  ++G LG G              LLP  +E      V  IACG RH + +T  
Sbjct: 3   LYCWGDA-SHGQLGLGG-------IENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++++ G     +LGH  E     P  I  L    V  +ACG  H+ A+T  G + +WGD
Sbjct: 55  GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G +GH +        K+   L    +  I+CG  H+  +TS G L+++G   +G 
Sbjct: 113 N--DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 170

Query: 383 LG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           LG     D   ++ P  + T+ G+    ++CG  H+  +     S SS+         +F
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLI-----SKSSA---------VF 216

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG  D++ R +P  +  +    +  V CG + SV LT  G V+T G+  YG
Sbjct: 217 GWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYG 276

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           QLG  V++  +  R+  E+  S + +VACG  H  AL  S  +VY++G GA+GQLG  + 
Sbjct: 277 QLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNT 336

Query: 559 DNRNSPTLV 567
            ++  P +V
Sbjct: 337 ISQTLPKVV 345



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 23/277 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LY WGD ++    LG        +P ++    D   +  I+CG  HT  +T+ G ++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +     LGH   + T  P  +  L+     +++CG  H+ A+              T  G
Sbjct: 62  NNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMAL--------------TEWG 105

Query: 437 KLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++ +WGD D G++GH  D +    P+ +  L+   + Q+ACG++ S+ALT+ G +Y+ GS
Sbjct: 106 QILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGS 165

Query: 496 AAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             YGQLGV     L     P R+   +    +  +ACG  H   ++ +S V+ WGK   G
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIP-LATIACGGNHSFLISKSSAVFGWGKNTCG 224

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           QLG  D+ NR  P+ +  ++   V+ V CG  ++  +
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 149/333 (44%), Gaps = 45/333 (13%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG+ S G+LG G      +  P  IE      V+ +ACG  HT  +T +G +Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             ++   LGH   +K    IP      L    +  I+CG  H+  +T  G + ++GD   
Sbjct: 63  NDHHQ--LGHELPTKRPLPIPE-----LQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115

Query: 381 GALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G +GH  D+    +P+ +  L      +++CG  H+ A+              TSCG+L+
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL--------------TSCGELY 161

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTMG 494
           +WG    G+LG   + P+  P   APL     +   +  +ACG + S  ++ S  V+  G
Sbjct: 162 SWGSNIYGQLG--VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWG 219

Query: 495 SAAYGQLGV------PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
               GQLG+           L   R  G      V  V CG  +   LT+   V+T G G
Sbjct: 220 KNTCGQLGLNDEQNRAYPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAG 273

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             GQLGHG  +N   P +V  L    + +V CG
Sbjct: 274 NYGQLGHGVSNNEMIPRMVIELMGSTITQVACG 306


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P+ +  T    V  ++CG RH + +T  G++++ G     +LGH  +     PQLI  
Sbjct: 29  LTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPQLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    +  ++CG  H+ A++  G + +WGD   + G LGH ++       KV   L    
Sbjct: 87  LQDYVIIQISCGSRHSLALSDWGQVLSWGDN--DCGQLGHATEKEIVQLPKVVRQLVSKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +   ACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  A   S  KVY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         PR++    D   +  +SCG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPD-TAVQQVSCGHRHTLFLTATGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P+ +  L+     ++SCG  H+ A+              +  
Sbjct: 65  GSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLAL--------------SDW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  +KE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV   + L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+   CG  F+  +
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFL 265



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 148/329 (44%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P+ I       V+ V+CG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K    IP      L    +  ISCG  H+  ++  G + ++GD  
Sbjct: 66  SNDYSQ--LGHDLPTKRPQLIPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  +     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P     C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V   ACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLK-TLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P ++     ++ V++V+CG  H   LT+T 
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPW-TPDTAVQQVSCGHRHTLFLTATG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G     QLGH     R  P L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDYSQLGHDLPTKR--PQLIPELQDYVIIQISCG 98


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 162/339 (47%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P  +  T    V  +ACG RH + +T  G++++ G     +LGH  +     P LI  
Sbjct: 29  LTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGH--DLPTKRPLLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    +  ++CG  H+ A++  G + +WGD   + G LGH +        KV   L    
Sbjct: 87  LQDYVIIQISCGSRHSLALSDWGQVLSWGDN--DCGQLGHATDKEIMQLPKVVRQLVSKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 27/305 (8%)

Query: 216 GGGEH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGG 274
           G  +H ++G+    +   L+P+  +  +      I+CG+RH++ ++  G++ SWG+   G
Sbjct: 65  GSNDHSQLGHDLPTKRPLLIPELQDYVII----QISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 275 RLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           +LGH  + ++   P+++  L    V  +ACG  H+ A+T  G+LY+WG   Y  G LG  
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY--GQLGVN 178

Query: 334 SK---VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           S      C  P +++  L GI L+ I+CG  H+ +++ +G +F +G  + G LG  D  +
Sbjct: 179 SPKDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            + P +++TLR L    V+CG   +  +              T+ G +FT G G  G+LG
Sbjct: 238 RAYPTQLKTLRTLGVRFVACGDEFSVFL--------------TNEGGVFTCGAGAYGQLG 283

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLGVPVADGL 509
           HG     + P  V  L+   I QVACG+  ++AL  S G VY  G  + GQLG      L
Sbjct: 284 HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343

Query: 510 VPTRV 514
           +  +V
Sbjct: 344 MLPQV 348



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         P ++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVEQVACGHRHTLFLTANGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G      LGH   + T  P  +  L+     ++SCG  H+ A+              +  
Sbjct: 65  GSNDHSQLGHD--LPTKRPLLIPELQDYVIIQISCGSRHSLAL--------------SDW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  DKE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV     L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 149/329 (45%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       VE VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              ++   LGH   +K    IP      L    +  ISCG  H+  ++  G + ++GD  
Sbjct: 66  SNDHSQ--LGHDLPTKRPLLIPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P+    C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLGVN--SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P+++     ++ VE+VACG  H   LT+  
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPW-TPDTAVEQVACGHRHTLFLTANG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G   + QLGH     R  P L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDHSQLGHDLPTKR--PLLIPELQDYVIIQISCG 98



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 311

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G ++++G  S G+LG      +  PQ++
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 176/350 (50%), Gaps = 32/350 (9%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           ++   A G RH++L+   GE+ S G+ S G+LG        HP+ I  L  + V+LV+CG
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCG 83

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           + H+ AV   G ++ WG G+   G LG G  K    IP K+   L GI +  +SCG +H+
Sbjct: 84  KEHSLAVCYKGRVFAWGAGS--EGQLGVGEFKEINLIPTKIK-TLTGIKIIQVSCGHYHS 140

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             ++  G +F++G  S G LG G    S + P+ V +L G+  T+V+ G  H+ A+ ++ 
Sbjct: 141 LALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLS- 199

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHD 479
                        G  F WG  + G+L        +    P  +  L +  +  ++CG++
Sbjct: 200 -------------GASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYE 246

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALT 537
            +  LT +G V+T G  +YGQLG  P A+   P  V+G   +  V ++ CG+YH +A + 
Sbjct: 247 HTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVY 304

Query: 538 STSKVYTWGKGANGQLG--HGDKDNRN----SPTLVDFLKDKQVKRVVCG 581
           +T KV ++G+G + +    H      N    SP   + L D QVK +  G
Sbjct: 305 TTGKVVSFGRGPSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAG 354



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 17/226 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG G + G LG GE +           L+P  +++   + +  ++CG  H++ ++
Sbjct: 94  GRVFAWGAG-SEGQLGVGEFK--------EINLIPTKIKTLTGIKIIQVSCGHYHSLALS 144

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G++FSWG  S G+LG G+E    + PQ +  L G+ +  VA G  H+ A++ SG  + 
Sbjct: 145 EGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFG 204

Query: 320 WGDGTYNSGLLG---HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           WG    N+G L    +   V    PR + G L  + + YISCG  HTAV+T  G +FTFG
Sbjct: 205 WGSN--NAGQLALRQNNVPVQSHKPRSI-GALKNLGVIYISCGYEHTAVLTQTGKVFTFG 261

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             S+G LGH        P+ VE + GL  +++ CG +HT A V  T
Sbjct: 262 GNSYGQLGHSPTAEKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYTT 306



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 27/295 (9%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G  +   A GE H+  +  +G+L++ GD +   G LG         P+++   LD + +
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNS--QGQLGRKGVQRDEHPKRIR-TLDNLRV 77

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGV 412
             +SCG  H+  V   G +F +G GS G LG G+    + IP +++TL G++  +VSCG 
Sbjct: 78  DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGH 137

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENI 471
           +H+ A+              +  G++F+WG    G+LG G + P +  P+ V  L    +
Sbjct: 138 YHSLAL--------------SEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPL 183

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRVDGEIAESFVEEV 526
            QVA G   S AL+ SG  +  GS   GQL      VPV       R  G +    V  +
Sbjct: 184 TQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSH--KPRSIGALKNLGVIYI 241

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +CG  H A LT T KV+T+G  + GQLGH     +  P LV+ + D  V ++ CG
Sbjct: 242 SCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDCG 295



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 24/266 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           PK + +   L V  ++CG  H++ V  +G +F+WG  S G+LG G   +++  P  I+ L
Sbjct: 66  PKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  V+CG YH+ A++  G +++WG  ++  G LG G +       +   +LDGI L
Sbjct: 126 TGIKIIQVSCGHYHSLALSEGGQVFSWGSNSH--GQLGLGKECPSQASPQRVRSLDGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH---ISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  + G L    +   + +  PR +  L+ L    +SC
Sbjct: 184 TQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISC 243

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+G    G+LGH     +  P+ V   ID  
Sbjct: 244 GYEHTAVL--------------TQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG-IDGL 288

Query: 471 ICQVACG--HDLSVALTTSGHVYTMG 494
           + Q+ CG  H L+   TT G V + G
Sbjct: 289 VSQIDCGSYHTLAYVYTT-GKVVSFG 313



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 215 LGGGEHRVGYSFSRQTDALL----PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGE 270
            G G +  G    RQ +  +    P+++ +   L V  I+CG  H  ++T+ G++F++G 
Sbjct: 203 FGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGG 262

Query: 271 ESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDG 323
            S G+LGH   A+   PQL+E + G+ V  + CG YHT A V  +G + ++G G
Sbjct: 263 NSYGQLGHSPTAEKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGRG 315


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 168/342 (49%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H  LVT+ G++F +G  + G+LG G +  V+ P  ++ L    V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHG---SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
              T  G+LY  G    N G LG G    + S  +      N  G  +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFF--NKQGP-IKMLAAGSNTSAA 155

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G L+  GD S G +G G   +   P+EV    G R   VSCG +H+A V V     
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVD---- 209

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVA 483
                     G L+T+G+ D G+LG   ++      P+ V  + D  + QVACG   +VA
Sbjct: 210 ----------GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258

Query: 484 LTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           LT +  VY+ G   +GQL  G  + +  +P RV     +  V+  ACG  H A +T    
Sbjct: 259 LTEN-EVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALITDNGL 316

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G+++  N+  PTL     D  V  V CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 27/294 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G L+ +G  + N G LG G+K +   P  V   L    +   +CG 
Sbjct: 41  ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGR 97

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V TS G+L+  G  + G LG GD                RT+      ++    + 
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+L+  GD  +G++G G +   L P+ V+  + + +  V+CG+  
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+    +A+  VP +V  +I +  V+ VACG  H  ALT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQV-TDIPDRVVQ-VACGGGHTVALT 260

Query: 538 STSKVYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             ++VY++G G  GQLGHG    ++R  P +V+  +  +VK   CG N TA+I 
Sbjct: 261 E-NEVYSFGLGQFGQLGHGTFIFESR-LPRVVEHFRKGRVKHAACGENHTALIT 312



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 39/314 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T +G +++ G  + G+LG G   D +   L+E  +
Sbjct: 79  PTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFN 138

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               ++++A G   + A+T+ G LY  GD +   G +G G + +   P++VS    G  +
Sbjct: 139 KQGPIKMLAAGSNTSAALTQDGRLYMRGDNS--EGQIGLGKESNALTPQEVSV---GKRV 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETLRGLRTTR 407
            ++SCG +H+A VT  G L+TFG+   G LG    +ST       +P++V  +   R  +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFGEKDSGKLG----LSTEKLANHKVPQQVTDIPD-RVVQ 248

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAP 465
           V+CG  HT A+                  +++++G G  G+LGHG    E RL P  V  
Sbjct: 249 VACGGGHTVALTE---------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVVEH 292

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESF 522
                +   ACG + +  +T +G +YT G   +G+LG+      +   PT       +  
Sbjct: 293 FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP-RFLDYH 351

Query: 523 VEEVACGAYHVAAL 536
           V  V CG  H+  L
Sbjct: 352 VHSVTCGGCHMLVL 365



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 37/231 (16%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +  +G +FTFG   F         +   +P            R+SCG  HTA V      
Sbjct: 9   IPESGAVFTFGKSKFADNAPSKFWLKNDVP-----------LRISCGDEHTALV------ 51

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T  GKLF +G  + G+LG G K     P CV  L  E +   ACG   ++  
Sbjct: 52  --------TENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTST 539
           T+ G++Y  G    GQLG+    G    R    + E F     ++ +A G+   AALT  
Sbjct: 104 TSRGNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQD 159

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            ++Y  G  + GQ+G G + N  +P  V     K+V  V CG   +A + +
Sbjct: 160 GRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQ 288
           ++ LP+ VE      V + ACG  H  L+T  G ++++G+   G+LG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 289 LIEILSGVNVELVACGEYHTCAVTR 313
           L       +V  V CG  H   + +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVLAK 367


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 24/326 (7%)

Query: 265 IFSWGEESGGRLGHGREADVSHP----QLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           ++SWG+   G+LG G   +V  P     L + L+  NV  +  G+ H+  +   GD+YTW
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G    G LGH       +   +   ++    S ++CG  HT VVT  G ++T+G+   
Sbjct: 61  GRGW--EGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKA 118

Query: 381 GALGHGDHISTSIPREVETLRGLRTT-RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG GD  S++ P  +++   L +   ++CG +HT A+ +               G ++
Sbjct: 119 GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIE--------------GTIW 164

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           +WG    G+LGHG+ +   FP  V  +  +   + ACG   ++ LT +  +Y  GS AYG
Sbjct: 165 SWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYG 224

Query: 500 QLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           QLG+  +D  V  P  VD  +  S    V CG  H  AL    ++YTWG+   GQLG G 
Sbjct: 225 QLGLNRSDKAVLQPDIVD-HLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGH 283

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLN 583
             +   P LV  L+  +V+++ CG +
Sbjct: 284 YTHSPVPELVTALRSVRVQQIACGYD 309



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 29/336 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS-HPQLIEILSGVNVELVAC 303
           +V +I  G  H+ ++ + G++++WG    G+LGH    ++   P ++  +       VAC
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT  VT +G +YTWG+    +G LG G   S   P  +   L+   +  I+CG +HT
Sbjct: 97  GRNHTVVVTDNGLIYTWGEN--KAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHT 154

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             +   G ++++G    G LGHG+  +   P +V  +      R +CG  HT   +V TD
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHT---LVLTD 211

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSV 482
           ++           K++ WG    G+LG    +  +  P+ V  L     C V CG+  S+
Sbjct: 212 AN-----------KIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSM 260

Query: 483 ALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTS--- 538
           AL  +  +YT G    GQLG+       VP  V   +    V+++ACG  H  A  +   
Sbjct: 261 ALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTA-LRSVRVQQIACGYDHCVAFVADEV 319

Query: 539 ------TSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
                    VY+WG+G  GQLGH +  +R +P +V+
Sbjct: 320 EPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 16/221 (7%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSCGVWHTAAVVVATDSSSSSP 429
           ++++G   +G LG G   +  +P  + +L     R    S G   + + V+A D      
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAED------ 54

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                 G ++TWG G +G+LGH    E  L P  V  + +     VACG + +V +T +G
Sbjct: 55  ------GDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNG 108

Query: 489 HVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            +YT G    GQLG   +     P  +D  +    V  +ACG +H  A+     +++WG+
Sbjct: 109 LIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGR 168

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              GQLGHG+      PT V  +  K   R  CG   T ++
Sbjct: 169 NQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVL 209



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 22/152 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMALDVHNIACGARHAVLVTK 261
           ++ WG   A G LG          +R   A+L P  V+        ++ CG  H++ + K
Sbjct: 215 IYAWGSN-AYGQLG---------LNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMK 264

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS------- 314
             +I++WG    G+LG G       P+L+  L  V V+ +ACG  H  A           
Sbjct: 265 NEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMP 324

Query: 315 --GDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
               +Y+WG G    G LGH   +S   PR V
Sbjct: 325 PLEHVYSWGRG--EEGQLGHNELLSRCTPRIV 354


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 172/349 (49%), Gaps = 22/349 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG- 304
           V ++  G      V   G + + G+ S GRLG+G  A  S P LIE  + V   L + G 
Sbjct: 163 VMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGS 222

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A+ ++G ++TWGDG Y  G LGHG   +   P+ +   L    +    CG  H+A
Sbjct: 223 DGHSIAIGKNGQIWTWGDGDY--GKLGHGDSTTQKSPKLIEA-LASRVIVDADCGHRHSA 279

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            V  AGHL+ +G+G +G LG GD +  S+P +V  +R    ++V CG  HT  VV++TD 
Sbjct: 280 AVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGFNHT--VVLSTDG 335

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            +           ++++G  + G+LGHGD   +  P+ +  L    I Q+A G  +S A+
Sbjct: 336 RT-----------VWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G +Y  G       G      ++P  V G ++   V ++A G  HV ALT    V+T
Sbjct: 385 TREGALYVWGFGPCLGNGSSDETFMLPKVVRG-LSGRVVIDIAVGENHVVALTKDGLVFT 443

Query: 545 WGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           WG   NGQ G G       SP +V  L    +++V  G   T  +C  +
Sbjct: 444 WGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT-FVCFWR 491



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 118/279 (42%), Gaps = 32/279 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+G   G LG G+     S         PK +E+  +  + +  CG RH+  V 
Sbjct: 233 GQIWTWGDG-DYGKLGHGDSTTQKS---------PKLIEALASRVIVDADCGHRHSAAVC 282

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G ++ WGE   GRLG G     S P  +++        V CG  HT  ++  G    W
Sbjct: 283 DAGHLYMWGEGDYGRLGLGDALQRSVP--VQVPDIREASQVVCGFNHTVVLSTDGRT-VW 339

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             G   +G LGHG     + P+ +   L G+ ++ I+ G   +A VT  G L+ +G G  
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGP- 397

Query: 381 GALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
             LG+G    T  +P+ V  L G     ++ G  H  A+              T  G +F
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVAL--------------TKDGLVF 442

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACG 477
           TWG+   G+ G G        P+ V  L    I QV  G
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAG 481



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 43/206 (20%)

Query: 414 HTAAVVVATDSSSSSPSGSTSCG-----KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLI 467
            +A  ++++ +++S   G T+ G     ++F WG     +L     E +L +P  ++  +
Sbjct: 102 QSALTILSSIAAASCNDGGTNGGPSFAEEVFCWGSNSSQQLTDATPEDKLLYPRNLS--V 159

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----------------VPVADGLVP 511
              +  +  G   + A+ ++G V   G  +YG+LG                 PV   L  
Sbjct: 160 YGKVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTS 219

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
              DG               H  A+    +++TWG G  G+LGHGD   + SP L++ L 
Sbjct: 220 KGSDG---------------HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALA 264

Query: 572 DKQVKRVVCGLNFTAIIC----LHKW 593
            + +    CG   +A +C    L+ W
Sbjct: 265 SRVIVDADCGHRHSAAVCDAGHLYMW 290



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +++WG G     LG G        S     +LPK V       V +IA G  H V +T
Sbjct: 388 GALYVWGFGPC---LGNG--------SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALT 436

Query: 261 KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHT 308
           K G +F+WG    G+ G G   A  + PQ+++ L G  ++ V  G  HT
Sbjct: 437 KDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 152/315 (48%), Gaps = 35/315 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  + CG  H   +T  G++  +G    G+LG G     S+PQ + +LSG  V  +A G 
Sbjct: 46  IAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGL 105

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+T SGDLY +GD       LGH        P+KV   L    ++ ++CG  HTAV
Sbjct: 106 EHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVP-PLGRAKITQLACGQDHTAV 164

Query: 366 VTSAGHLFTFG---DGSFGALGH---GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           +TS+G LF FG   DG+ G  GH   G  I  S P+ V  L+G    ++ CG+ HT A+ 
Sbjct: 165 LTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVAL- 223

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLIDENICQVACGH 478
                        T+ G ++ WG+  +G+LG GD + R  P  V  PL       VACG 
Sbjct: 224 -------------TAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGG 270

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG-------VPVADGLVPTRVDGEIAESFVEEVACGAY 531
             ++A+T    VY  GS  +GQLG       VP     VPTR+   +    V+    GA+
Sbjct: 271 QHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVP-----VPTRIV-RLGGRRVKNCVGGAW 324

Query: 532 HVAALTSTSKVYTWG 546
           H    T T + Y  G
Sbjct: 325 HTIIGTVTGEQYIMG 339



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 140/315 (44%), Gaps = 39/315 (12%)

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIH-LSYISCGLWHTAVVTSAGHLFTFG 376
            W  G  + G LG+G+   S ++P +V+  L     ++ + CG  HT  +TS G +  FG
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +G  G LG G+  S S P+ V  L G    +++ G+ H+ A+              T  G
Sbjct: 70  NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLAL--------------TESG 115

Query: 437 KLFTWGDGDKGRLG--HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            L+ +GD   G+LG  H        P+ V PL    I Q+ACG D +  LT+SG ++  G
Sbjct: 116 DLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFG 175

Query: 495 SAAYGQLGV-------PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           +   G LGV       P      P  V G +    V ++ CG  H  ALT+   VY WG+
Sbjct: 176 NNRDGALGVAGHANEGPPIVASAPQLVTG-LKGKHVVQIGCGLQHTVALTAAGGVYCWGE 234

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
              GQLG GD  NR +P+L            VC    +A  C+H           + C +
Sbjct: 235 NGRGQLGTGDTQNRYTPSL------------VC-KPLSAFKCIHVACGGQHTIAVTDCDD 281

Query: 608 PFGFRRKRHNCYNCG 622
            +GF   RH     G
Sbjct: 282 VYGFGSDRHGQLGLG 296



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 17/222 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GD++ +G+ ++      G+  +G++F+ +     P+ V       +  +ACG  H  ++T
Sbjct: 115 GDLYAFGDNLS------GQLGLGHNFTAKEQT--PQKVPPLGRAKITQLACGQDHTAVLT 166

Query: 261 KQGEIFSWGEESGGRL---GHGREAD---VSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
             GE+F +G    G L   GH  E      S PQL+  L G +V  + CG  HT A+T +
Sbjct: 167 SSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAA 226

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G +Y WG+     G LG G   + + P  V   L      +++CG  HT  VT    ++ 
Sbjct: 227 GGVYCWGEN--GRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYG 284

Query: 375 FGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHT 415
           FG    G LG G   +   +P  +  L G R      G WHT
Sbjct: 285 FGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHT 326



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 5/144 (3%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI-EIL 293
           P+ V       V  I CG +H V +T  G ++ WGE   G+LG G   +   P L+ + L
Sbjct: 199 PQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPL 258

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK-VSCWIPRKVSGNLDGIH 352
           S      VACG  HT AVT   D+Y +G   +  G LG G + V   +P ++   L G  
Sbjct: 259 SAFKCIHVACGGQHTIAVTDCDDVYGFGSDRH--GQLGLGRRGVIVPVPTRIV-RLGGRR 315

Query: 353 LSYISCGLWHTAVVTSAGHLFTFG 376
           +     G WHT + T  G  +  G
Sbjct: 316 VKNCVGGAWHTIIGTVTGEQYIMG 339


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 233/521 (44%), Gaps = 98/521 (18%)

Query: 102  TSPTVTP-----FDFGDIQGTQVPLDNVSNNGLGKAFADIISYTEAANTNSRAD----SV 152
            T+P + P     F F +   +    DN  N  + +     +      ++N  +D    SV
Sbjct: 718  TNPALRPILRKVFQFKNESESISEQDNNLNYSIKEWLTTYLMIIARLSSNQYSDNFVESV 777

Query: 153  SFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIAN 212
            S+S  P++N   D+ N+    +     SL +  + ++H   H+       ++ WG   + 
Sbjct: 778  SYSHQPISNV-SDSENEIEHKS-----SLGAGWAHAAHIRNHK-------LYTWGHS-SY 823

Query: 213  GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
            G LG G H        +T    P +    + ++V  +ACG  H++ +T  G ++SWG   
Sbjct: 824  GCLGVGPHMT------KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876

Query: 273  GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
             G+LG GR     +P L++ LS   +  V+ G+YH+ A++ SG L+TWG G Y  G LGH
Sbjct: 877  YGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVY--GQLGH 934

Query: 333  GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            G+   C  P K+  +L+  ++     G  H+ ++TS G +FTFG GSFG LG+G     +
Sbjct: 935  GAIDDCEKP-KLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKIT 993

Query: 393  IPREV----ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
             P  V    E ++ + T       +H  A+              +  G+L+TWG   +  
Sbjct: 994  SPVPVYGLPEPIKCIYT-----AYFHNLAL--------------SDVGRLYTWGSSPQVL 1034

Query: 449  LGHGDKEPRLFPECV-------------------------APLIDE-----NICQVACGH 478
              H   + R   + V                           L+D      +I Q+ CG 
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094

Query: 479  DLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTR---------VD-GEIAESFVEEVA 527
              S  ++T+G +YT G    GQLGV  + + LVPT          VD    + S ++EV 
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154

Query: 528  CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
            CGA    AL + +K++ WG    GQLG   +++  + TL+D
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL-AKTLLD 1194



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 169/382 (44%), Gaps = 66/382 (17%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVEL--VACGE 305
            +  G  HA  + +  ++++WG  S G LG G      + P  +     + VE+  VACG 
Sbjct: 800  LGAGWAHAAHI-RNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGR 858

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             H+ A+T +G +Y+WG   Y  G LG G +     P  V    + + +S +S G +H+  
Sbjct: 859  NHSIALTTNG-VYSWGSNHY--GQLGTGRRGQAPYPMLVDSLSNELIVS-VSAGQYHSLA 914

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            ++++G L+T+G G +G LGHG       P+ +++L          G  H+  +       
Sbjct: 915  ISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIIL------- 967

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-QVACGHDLSVAL 484
                   TS GK+FT+G G  G+LG+G       P  V  L +   C   A  H+L  AL
Sbjct: 968  -------TSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYGLPEPIKCIYTAYFHNL--AL 1018

Query: 485  TTSGHVYTMGSA-------------AYGQL--------------GVPVADGLV---PTRV 514
            +  G +YT GS+             A  QL               +   DGL+   PT V
Sbjct: 1019 SDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLV 1078

Query: 515  DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV-----DF 569
            D       + ++ CG +H A +++T ++YTWG   +GQLG      R  PT+        
Sbjct: 1079 DTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSV 1138

Query: 570  LKDKQ------VKRVVCGLNFT 585
            + D        +K V CG +FT
Sbjct: 1139 IVDSSSTSGSLIKEVRCGADFT 1160


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 160/326 (49%), Gaps = 22/326 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V+ +ACG RH + +T  G++++ G     +LGH  E     P  I  L    +  +ACG 
Sbjct: 38  VNQVACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGS 95

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+T  G + +WGD     G LGH S        K+   L    +  I+CG  H+  
Sbjct: 96  RHSMALTEWGQVLSWGDN--ECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLA 153

Query: 366 VTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +T  G L+++G   +G LG     +    + P  + TL G+    ++CG  HT  +    
Sbjct: 154 LTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLI---- 209

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S SS+         +F WG  + G+LG  D+  R +P  +  L    +  VACG + SV
Sbjct: 210 -SKSSA---------VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSK 541
            LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG  H  AL  S  +
Sbjct: 260 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGR 319

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           +Y +G G++GQLG  +  + N P +V
Sbjct: 320 IYGFGLGSSGQLGTRNTKSLNLPQVV 345



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG+ ++    LG         P ++    D   ++ ++CG  HT  +T++G ++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSA-VNQVACGHRHTLFLTASGKVYAC 60

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P ++  L     T+++CG  H+ A+              T  
Sbjct: 61  GSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMAL--------------TEW 104

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD + G+LGH  D++    P+ V  L+ + + Q+ACG++ S+ALT  G +Y+ G
Sbjct: 105 GQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWG 164

Query: 495 SAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV     L     P R+   +       +ACG  H   ++ +S V+ WG+   
Sbjct: 165 SNIYGQLGVKSPSELSQCNYPMRLTTLLGIP-AAAIACGGNHTFLISKSSAVFGWGRNNC 223

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 148/329 (44%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       V  VACG  HT  +T SG +Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 322 DGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K    IP      L+   ++ I+CG  H+  +T  G + ++GD  
Sbjct: 62  SNDYSQ--LGHELPTKRPLQIPE-----LEDYVITQIACGSRHSMALTEWGQVLSWGDNE 114

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              T CG+L
Sbjct: 115 CGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL--------------TCCGEL 160

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAP-----LIDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG   K P    +C  P     L+      +ACG + +  ++ S  V+  
Sbjct: 161 YSWGSNIYGQLGV--KSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGW 218

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACG 306


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 179/395 (45%), Gaps = 55/395 (13%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ V++   ++   ++ G     +V   GE++ WG  S G+LG G   D S P+L++ L 
Sbjct: 4   PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 63

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV------------------ 336
           G  V+ VAC + HT      G  Y WG    N  L  HG  +                  
Sbjct: 64  GKVVKAVACSQEHTVCCLDDGSAYAWGC-ALNGRLGLHGLSIPSSAGLGVFSPATGARPE 122

Query: 337 ----SCWI--PRKVSGNLDGIHLSYISCGLWHTAVV----TSAGHLFTFGDGSFGALGHG 386
               +C +  PR +  +L G  ++ ++CG +H+A +         LFT G G  G LGHG
Sbjct: 123 PLASACAVCTPRVLE-SLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHG 181

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
           D     +P  V  L  +  T ++CG  HTA V              TS G L+TWG    
Sbjct: 182 DEEDRHLPTAVHALENVNITAIACGAHHTACV--------------TSAGTLYTWGGAAF 227

Query: 447 GRLGHGD-KEPRLFPECVA-PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           G+LG G  +  +L P+ V+ PL ++ +  VA G   S  +TT G +YT G     +LG  
Sbjct: 228 GKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHE 285

Query: 505 V---ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD-N 560
           V   +D ++P RV+  +   FV  V CG  H A +     V+ WG   +  LGHGD +  
Sbjct: 286 VQGESDEILPRRVEALLGL-FVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDPEVP 342

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
            N P  +  L  K V ++ C   FT   C  + VS
Sbjct: 343 PNRPACLRALNGKGVVQLSCASTFTVAFCDPQRVS 377



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 158/335 (47%), Gaps = 46/335 (13%)

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
           ++ P+L++ L  +N E V+ G      V  SG+LY W  G  + G LG G +    +PR 
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMW--GANSEGQLGTGDRRDASVPRL 58

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTS---------- 392
           V   L G  +  ++C   HT      G  + +G    G LG HG  I +S          
Sbjct: 59  VKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 117

Query: 393 --------------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
                          PR +E+L G     V+CG +H+A + +     +S          L
Sbjct: 118 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTS----------L 167

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           FT G G  GRLGHGD+E R  P  V  L + NI  +ACG   +  +T++G +YT G AA+
Sbjct: 168 FTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAF 227

Query: 499 GQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH- 555
           G+LG+    G  L+P  V G +    V  VA G+ H A +T+  ++YTWG+G   +LGH 
Sbjct: 228 GKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHE 285

Query: 556 --GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+ D    P  V+ L    V  VVCG   TA I
Sbjct: 286 VQGESDE-ILPRRVEALLGLFVIHVVCGDAHTACI 319



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 22/220 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F  G G+ NG LG G+         + D  LP AV +   +++  IACGA H   VT  
Sbjct: 167 LFTCGLGL-NGRLGHGD---------EEDRHLPTAVHALENVNITAIACGAHHTACVTSA 216

Query: 263 GEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G +++WG  + G+LG G  R + +    +   L    V  VA G  H+  VT  G+LYTW
Sbjct: 217 GTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTW 276

Query: 321 GDGTYNSGLLGHGSKVSC--WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G G      LGH  +      +PR+V   L G+ + ++ CG  HTA +   G+++ +G  
Sbjct: 277 GQGRR----LGHEVQGESDEILPRRVEALL-GLFVIHVVCGDAHTACIVENGNVWAWGTS 331

Query: 379 SFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAA 417
               LGHGD  +  + P  +  L G    ++SC    T A
Sbjct: 332 RI--LGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVA 369


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 34/374 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG   A+G LG G          +   ++P+ ++ + A +V  + CG  H + +TK+
Sbjct: 3   IYCWG-NTAHGELGLGG-------IEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE 54

Query: 263 GEIFSWGEESGGRLGH------GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           G++++ G    G+LGH       +   +S  + +  L    +  ++CG  H+ A+T  G 
Sbjct: 55  GKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +++WG      G LGH ++       ++   +   H+  I+ G +H   +T+ G L+ +G
Sbjct: 115 VFSWGSNA--VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172

Query: 377 DGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
             S+G LG G       +P  +++L G+    ++CG  H+ AV              +  
Sbjct: 173 SNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV--------------SKS 218

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G +F WG    G+LG  D   R +P  +  L    +  ++CG D SV LT  G V+T G+
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGA 278

Query: 496 AAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQL 553
             +GQLG    ++ +VP +V  E+  S + ++ACG  H  A   S  K+Y +G G  GQL
Sbjct: 279 GTFGQLGHGSCSNEIVPRKV-FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQL 337

Query: 554 GHGDKDNRNSPTLV 567
           G G   N ++P +V
Sbjct: 338 GIGMVGNHSTPQIV 351



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 27/327 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           I+ WG  + G LG G   E  V  P+ ++      V  V CG  HT  +T+ G +Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 323 GTYNSGLLGHG-SKVSCWIPR----KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
              + G LGH    +    PR    K   +L+   ++ ISCG  H+  +T+ G +F++G 
Sbjct: 63  N--DHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 378 GSFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            + G LGH  ++     PR ++ +      +++ G +H  A+              T+ G
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLAL--------------TNNG 166

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +L+ WG    G+LG G    ++  P  +  L    I  +ACG + S A++ SG ++  G 
Sbjct: 167 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGK 226

Query: 496 AAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
             +GQLG+  +     PT++   +    V  ++CG      LT+   V+T G G  GQLG
Sbjct: 227 NTFGQLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG 285

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           HG   N   P  V  L   ++ ++ CG
Sbjct: 286 HGSCSNEIVPRKVFELMGSKITQIACG 312



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +Y WG+  +    LG   +    +PRK+  +     +  + CG  HT  +T  G ++  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWS-QADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 377 DGSFGALGHG-DHISTSIPR-----EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +   G LGH  D +    PR      + +L     T +SCG  H+ A+            
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLAL------------ 109

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGH 489
             T+ G++F+WG    G+LGH  +  R   P  +  +  +++ Q+A G    +ALT +G 
Sbjct: 110 --TNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGE 167

Query: 490 VYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           +Y  GS +YGQLG+      VP   +   +A   +  +ACG  H  A++ +  ++ WGK 
Sbjct: 168 LYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKN 227

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             GQLG  D ++R  PT +  L+   V+ + CG +F+  +
Sbjct: 228 TFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFL 267


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 178/369 (48%), Gaps = 30/369 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG+  ++G LG G              LLP  +E      V  IACG RH + +T  
Sbjct: 3   LYCWGDA-SHGQLGLGG-------IENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++++ G     +LGH  E     P  I  L    V  +ACG  H+ A+T  G + +WGD
Sbjct: 55  GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G +GH +        K+   L    +  I+CG  H+  +TS G L+++G   +G 
Sbjct: 113 N--DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 170

Query: 383 LG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           LG     D   ++ P  + T+ G+    ++CG  H+  +     S SS+         +F
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLI-----SKSSA---------VF 216

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG  D++ R +P  +  +    +  V CG + SV LT  G V+T G+  YG
Sbjct: 217 GWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYG 276

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           QLG   ++  +  R+  E+  S + +VACG  H  AL  S  +VY++G GA+GQLG  + 
Sbjct: 277 QLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNT 336

Query: 559 DNRNSPTLV 567
            ++  P +V
Sbjct: 337 ISQTLPKVV 345



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 23/277 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LY WGD ++    LG        +P ++    D   +  I+CG  HT  +T+ G ++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +     LGH   + T  P  +  L+     +++CG  H+ A+              T  G
Sbjct: 62  NNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMAL--------------TEWG 105

Query: 437 KLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++ +WGD D G++GH  D +    P+ +  L+   + Q+ACG++ S+ALT+ G +Y+ GS
Sbjct: 106 QILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGS 165

Query: 496 AAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             YGQLGV     L     P R+   +    +  +ACG  H   ++ +S V+ WGK   G
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIP-LATIACGGNHSFLISKSSAVFGWGKNTCG 224

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           QLG  D+ NR  P+ +  ++   V+ V CG  ++  +
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 149/333 (44%), Gaps = 45/333 (13%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG+ S G+LG G      +  P  IE      V+ +ACG  HT  +T +G +Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             ++   LGH   +K    IP      L    +  I+CG  H+  +T  G + ++GD   
Sbjct: 63  NDHHQ--LGHELPTKRPLPIPE-----LQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115

Query: 381 GALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G +GH  D+    +P+ +  L      +++CG  H+ A+              TSCG+L+
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL--------------TSCGELY 161

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTMG 494
           +WG    G+LG   + P+  P   APL     +   +  +ACG + S  ++ S  V+  G
Sbjct: 162 SWGSNIYGQLG--VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWG 219

Query: 495 SAAYGQLGV------PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
               GQLG+           L   R  G      V  V CG  +   LT+   V+T G G
Sbjct: 220 KNTCGQLGLNDEQNRAYPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAG 273

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             GQLGHG  +N   P +V  L    + +V CG
Sbjct: 274 NYGQLGHGASNNEMIPRMVIELMGSTITQVACG 306


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 151/325 (46%), Gaps = 35/325 (10%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           P  IE+ + + +  VA    H   VT    +Y+WG+G+   G LGHG      +P  V  
Sbjct: 68  PFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGS--KGQLGHGDLDPRNVPTSVEA 125

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L G  ++ ++CG   +   +  G + T GDGS G LGHGD+ S S PR +ETL  +  T
Sbjct: 126 -LKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVT 184

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            +SCG  H   V V               G++F WG G  GRLG GD+E    P  V   
Sbjct: 185 SISCGPEHVVGVGVD--------------GEIFAWGKGKDGRLGLGDEEDFCEPMEVTLR 230

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL----------------- 509
               I +V CG D ++ LT  G +   GS AY +LG+    G                  
Sbjct: 231 DPVFIQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRK 290

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
           VPT V   +++  V ++  G +H A +     VY +GK  +GQLG G+   R +P  V  
Sbjct: 291 VPTAVKA-LSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQT 349

Query: 570 LKDKQVKRVVCGLNFTAIICLHKWV 594
           + DK +  V CG ++T    +  ++
Sbjct: 350 MADKLISTVACGEDYTVAGAMDNFL 374



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 138/321 (42%), Gaps = 13/321 (4%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +P  +E    L +  +A    H  LVT +  ++SWGE S G+LGHG     + P  +E L
Sbjct: 67  IPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTSVEAL 126

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G ++  VACG   +   + +G + T GDG+  +G LGHG   S   PR +   L  + +
Sbjct: 127 KGKSITRVACGAGFSVFGSDNGIVMTCGDGS--TGCLGHGDYHSASRPRLIE-TLLSVDV 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ISCG  H   V   G +F +G G  G LG GD      P EV     +    V CGV 
Sbjct: 184 TSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVD 243

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKL-FTWGDG----DKGRLGHGDKEPRLFPECVAPLID 468
            T   +  TD       GS +  KL      G     K      + E R  P  V  L  
Sbjct: 244 GT---MFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSK 300

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVA 527
             +  +  G   S  +   G VY  G   +GQLG         P +V   +A+  +  VA
Sbjct: 301 FRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQ-TMADKLISTVA 359

Query: 528 CGAYHVAALTSTSKVYTWGKG 548
           CG  +  A    + +Y WGKG
Sbjct: 360 CGEDYTVAGAMDNFLYLWGKG 380



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 133/308 (43%), Gaps = 43/308 (13%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WGEG + G LG G+              +P +VE+     +  +ACGA  +V  +  
Sbjct: 98  VYSWGEG-SKGQLGHGDL---------DPRNVPTSVEALKGKSITRVACGAGFSVFGSDN 147

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G + + G+ S G LGHG     S P+LIE L  V+V  ++CG  H   V   G+++ WG 
Sbjct: 148 GIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFAWGK 207

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G    G LG G +     P +V+   D + +  + CG+  T  +T  G L   G  ++  
Sbjct: 208 G--KDGRLGLGDEEDFCEPMEVTLR-DPVFIQEVKCGVDGTMFLTDMGCLLACGSNAYNK 264

Query: 383 LG--HGDHISTS--------------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           LG  H      S              +P  V+ L   R   +  G  H+A VV       
Sbjct: 265 LGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVV------- 317

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                    G ++ +G    G+LG G+ +PR  P  V  + D+ I  VACG D +VA   
Sbjct: 318 -------EPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVACGEDYTVAGAM 370

Query: 487 SGHVYTMG 494
              +Y  G
Sbjct: 371 DNFLYLWG 378



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 23/230 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V   G+G + G LG G++   +S SR      P+ +E+ +++DV +I+CG  H V V 
Sbjct: 148 GIVMTCGDG-STGCLGHGDY---HSASR------PRLIETLLSVDVTSISCGPEHVVGVG 197

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             GEIF+WG+   GRLG G E D   P  + +   V ++ V CG   T  +T  G L   
Sbjct: 198 VDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVDGTMFLTDMGCLLAC 257

Query: 321 GDGTYNSGLLGH-----GSKVSCWIPRKVSGN--------LDGIHLSYISCGLWHTAVVT 367
           G   YN   L H      S  + +   +V G         L    +  +  G  H+AVV 
Sbjct: 258 GSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVV 317

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
             G ++ FG    G LG G+      P +V+T+     + V+CG  +T A
Sbjct: 318 EPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVACGEDYTVA 367


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 29/348 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           ++   A G RH++L+   GE+ S+G+ S G+LG         P+ I  L  + V+LV+CG
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ AV   G ++ WG G+     +G  ++++  IPRK+   L  I +  +SCG  H+ 
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINL-IPRKIK-TLTDIKIIQVSCGHHHSL 141

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++  G LFT+G  S G LG G    S + P+ V+ L G+  T+V+ G  H+ A+ ++  
Sbjct: 142 ALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLS-- 199

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLIDENICQVACGHD 479
                       G  F WG   +G+L    K   +     P  V  L +  +  ++CG++
Sbjct: 200 ------------GASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYE 247

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALT 537
            +  LT +G V+T G  +YGQLG  P A    P  V+G   +  V ++ CG+YH +A + 
Sbjct: 248 HTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVY 305

Query: 538 STSKVYTWGKG--ANGQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCG 581
           +T KV ++G+G        H +    N   L+  D L D +VK +  G
Sbjct: 306 TTGKVVSFGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAG 353



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 26/294 (8%)

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G  +   A GE H+  +  +G+L+++GD ++  G LG         P+++   L+ + + 
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSH--GQLGRRDVQRQEQPKRIPA-LETLRVD 78

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVW 413
            +SCG  H+  V   G +F +G GS G LG G+    + IPR+++TL  ++  +VSCG  
Sbjct: 79  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHH 138

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENIC 472
           H+ A+              +  G+LFTWG    G+LG G + P +  P+ V  L    + 
Sbjct: 139 HSLAL--------------SEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLT 184

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRVDGEIAESFVEEVA 527
           QVA G   S AL+ SG  +  GS + GQL      VPV     P  VD  +    V  ++
Sbjct: 185 QVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDA-LENLGVVYIS 243

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           CG  H A LT T KV+T+G  + GQLG+     +  P LV+ + D  V ++ CG
Sbjct: 244 CGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGI-DGLVSQIDCG 296



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 23/258 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ET R+ L S     S    ++     G VF WG G + G LG GE          
Sbjct: 68  RIPALETLRVDLVSCGKEHSLAVCYK-----GRVFAWGAG-SEGQLGIGEF--------N 113

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQ 288
              L+P+ +++   + +  ++CG  H++ +++ G +F+WG  S G+LG G+E    + PQ
Sbjct: 114 EINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQ 173

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK----VSCWIPRKV 344
            ++ L G+ +  VA G  H+ A++ SG  + WG  +   G L    K    V    P  V
Sbjct: 174 RVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNS--EGQLALRKKNVPVVQSSKPCSV 231

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
              L+ + + YISCG  HTAV+T  G +FTFG  S+G LG+        P+ VE + GL 
Sbjct: 232 DA-LENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL- 289

Query: 405 TTRVSCGVWHTAAVVVAT 422
            +++ CG +HT A V  T
Sbjct: 290 VSQIDCGSYHTLAYVYTT 307



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 25/267 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           PK + +   L V  ++CG  H++ V  +G +F+WG  S G+LG G   +++  P+ I+ L
Sbjct: 66  PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           + + +  V+CG +H+ A++  G L+TWG  ++  G LG G +       +    LDGI L
Sbjct: 126 TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSH--GQLGLGKECPSQASPQRVQFLDGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH----ISTSIPREVETLRGLRTTRVS 409
           + ++ G  H+  ++ +G  F +G  S G L         + +S P  V+ L  L    +S
Sbjct: 184 TQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYIS 243

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+G    G+LG+     +  P+ V   ID 
Sbjct: 244 CGYEHTAVL--------------TQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG-IDG 288

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 289 LVSQIDCGSYHTLAYVYTT-GKVVSFG 314



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 125/268 (46%), Gaps = 36/268 (13%)

Query: 338 CW-------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
           CW       + R+ +G   G  L   + G  H+ ++ S G L ++GD S G LG  D   
Sbjct: 4   CWNTNRPGPLRRRPAGR-GGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQR 62

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
              P+ +  L  LR   VSCG  H+ AV                 G++F WG G +G+LG
Sbjct: 63  QEQPKRIPALETLRVDLVSCGKEHSLAVCYK--------------GRVFAWGAGSEGQLG 108

Query: 451 HGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVAD 507
            G+  E  L P  +  L D  I QV+CGH  S+AL+  G ++T GS ++GQLG+      
Sbjct: 109 IGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPS 168

Query: 508 GLVPTRV---DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD----N 560
              P RV   DG      + +VA G  H  AL+ +   + WG  + GQL    K+     
Sbjct: 169 QASPQRVQFLDGIP----LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQ 224

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            + P  VD L++  V  + CG   TA++
Sbjct: 225 SSKPCSVDALENLGVVYISCGYEHTAVL 252



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P +V++   L V  I+CG  H  ++T+ G++F++G  S G+LG+   A    PQL+E + 
Sbjct: 228 PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGID 287

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDG 323
           G+ V  + CG YHT A V  +G + ++G G
Sbjct: 288 GL-VSQIDCGSYHTLAYVYTTGKVVSFGRG 316


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 170/346 (49%), Gaps = 33/346 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + VH I+CG  H+  VT+QG +F +G+ + G+LG   +  V+ P  +++L G   + VAC
Sbjct: 35  IPVH-ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVAC 93

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT   T  G++   G  +     LGH +    +  +++    D   +  +S G   +
Sbjct: 94  GTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTS 151

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A +T  G LF +GD S G LG G+     +P+E+    G     VSCG  H+A V     
Sbjct: 152 AALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNM--GQSIHWVSCGYRHSALV----- 204

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLS 481
                    T  G ++T+G+   GRLG    +     +P+ V  L   ++ QVACG   +
Sbjct: 205 ---------TDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESL--RSVLQVACGGKHT 253

Query: 482 VALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           +AL T   +Y  G   +GQLG    V VAD  V     G   +  V  V CG  H A +T
Sbjct: 254 LAL-TEDELYCFGGGEFGQLGLGMLVFVADSPVAV---GHFRKDRVTHVTCGEQHSALIT 309

Query: 538 STSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
            +  +YT+G G +G+LGHGD++  N+ +PT+     +  V  V CG
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACG 355



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 36/298 (12%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACG 304
             ++ACG  H ++ T QGEI + G  S G+LG G   D +S  +L        ++L++ G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           ++ + A+T  G L+ WGD +  +G LG G+     +P+++  N+ G  + ++SCG  H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNS--AGQLGFGNDSHALLPQEL--NM-GQSIHWVSCGYRHSA 202

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +VT +G ++TFG+ + G LG   H   + S P+ VE+LR +   +V+CG  HT A+    
Sbjct: 203 LVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRSV--LQVACGGKHTLALTE-- 258

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLIDENICQVACGH 478
                         +L+ +G G+ G+LG G     +F    P  V     + +  V CG 
Sbjct: 259 -------------DELYCFGGGEFGQLGLG---MLVFVADSPVAVGHFRKDRVTHVTCGE 302

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG---VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
             S  +T SG +YT G   +G+LG       +   PT V     E  V  VACG+ H+
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPT-VCQRFFEYSVMTVACGSSHM 359



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 125/235 (53%), Gaps = 23/235 (9%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           ++S+  H SA    D  G +F+WG+  A G LG         F   + ALLP+  E  M 
Sbjct: 143 LLSAGDHTSAALTED--GRLFLWGDNSA-GQLG---------FGNDSHALLPQ--ELNMG 188

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELV 301
             +H ++CG RH+ LVT  G+++++GE + GRLG    + A+ S+PQ +E L   +V  V
Sbjct: 189 QSIHWVSCGYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLR--SVLQV 246

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACG  HT A+T   +LY +G G +  G LG G  V         G+     +++++CG  
Sbjct: 247 ACGGKHTLALTED-ELYCFGGGEF--GQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQ 303

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWH 414
           H+A++T +G L+TFGDG  G LGHGD   T+   P   +         V+CG  H
Sbjct: 304 HSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 143/297 (48%), Gaps = 36/297 (12%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT  G L+ +GD   N G LG   K     P  V   L G     ++CG 
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDN--NRGQLGLQIKGPVTKPVCVKV-LKGERAQSVACGT 95

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V TS G +   G  S G LG G H + SI          +  R  C  +    ++ 
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSI--------SFQRLRPFCD-YAPIKLLS 145

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A D +S++    T  G+LF WGD   G+LG G+    L P+ +   + ++I  V+CG+  
Sbjct: 146 AGDHTSAA---LTEDGRLFLWGDNSAGQLGFGNDSHALLPQELN--MGQSIHWVSCGYRH 200

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T SG VYT G +A G+LG+    +A+   P RV+   +   V +VACG  H  ALT
Sbjct: 201 SALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRS---VLQVACGGKHTLALT 257

Query: 538 STSKVYTWGKGANGQLGHG------DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              ++Y +G G  GQLG G      D     SP  V   +  +V  V CG   +A+I
Sbjct: 258 E-DELYCFGGGEFGQLGLGMLVFVAD-----SPVAVGHFRKDRVTHVTCGEQHSALI 308



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 27/224 (12%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   G +FTFG            I+ S P  +  L+      +SCG  H+A V       
Sbjct: 7   IPDTGAVFTFGKS---------KIANSAPSRL-WLKSDIPVHISCGQSHSAFV------- 49

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G+LF +GD ++G+LG   K P   P CV  L  E    VACG D ++  T
Sbjct: 50  -------TEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVST 102

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           + G +   G  + GQLG+    D +   R+      + ++ ++ G +  AALT   +++ 
Sbjct: 103 SQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFL 162

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           WG  + GQLG G+  +   P  ++    + +  V CG   +A++
Sbjct: 163 WGDNSAGQLGFGNDSHALLPQELNM--GQSIHWVSCGYRHSALV 204


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 185/371 (49%), Gaps = 35/371 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           VF WG          G+  +G  FS +T  L PK V     LD+  I+CG +H ++VTK 
Sbjct: 4   VFGWGRS------NDGQLSIG--FSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKD 55

Query: 263 GEIFSWGEESGGRLGH----GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           G+++S G    G LGH     R   +   +L+  LS + V   A G   +  +T +G+++
Sbjct: 56  GKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVF 115

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPR--KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +WG    + G LG G K+S    R  K+  +L    +  I+CG  H   +T  G LF++G
Sbjct: 116 SWGRN--DKGQLGRG-KLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172

Query: 377 DGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
              +G LG G  H     P+++  LRG+   +++ G  H+  +              T  
Sbjct: 173 CNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFIL--------------TWS 218

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
             +F WG    G+LG  D+  +  P     L ++ +  ++CG D +VALT  G V++ G+
Sbjct: 219 RAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGA 278

Query: 496 AAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQL 553
             +GQLG     + ++P RV  E+  S + +VACG  H  A + +S K+Y +G G +GQL
Sbjct: 279 GGFGQLGHNSTQNEILPKRV-MELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQL 337

Query: 554 GHGDKDNRNSP 564
           G GD   RNSP
Sbjct: 338 GLGDTSARNSP 348



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 30/328 (9%)

Query: 265 IFSWGEESGGRL--GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG  + G+L  G   E  +  P+ +  L  ++++ ++CGE HT  VT+ G LY+ G 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 323 GTYNSGLLGHGSK----VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
             Y  G LGH       VS  +   VS +L  + +   + G   + V+T+AG +F++G  
Sbjct: 64  NEY--GELGHSKPRSRAVSIDVVELVS-SLSSMQVIQAAGGSEFSLVITTAGEVFSWGRN 120

Query: 379 SFGALGHGDHISTSIPREVETLRGL---RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
             G LG G  +S    R+ + ++ L      +++CG  H  A+              T  
Sbjct: 121 DKGQLGRGK-LSKEEERKPKLMKSLAVCTVVQITCGANHCLAL--------------TDD 165

Query: 436 GKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF+WG    G+LG G        P+ +  L    I Q+A G + S  LT S  V+  G
Sbjct: 166 GRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWG 225

Query: 495 SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             ++GQLG+    D   PT     +    V  ++CG  H  ALT    V+++G G  GQL
Sbjct: 226 KNSFGQLGLNDEYDKSHPTLCKS-LRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQL 284

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           GH    N   P  V  L    + +V CG
Sbjct: 285 GHNSTQNEILPKRVMELMGSVISQVACG 312



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 22/279 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG        +G   + S   P++VS  L  + +  ISCG  HT +VT  G L++ G
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVS-RLQELDIKEISCGEKHTLIVTKDGKLYSCG 62

Query: 377 DGSFGALGHGDH----ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
              +G LGH       +S  +   V +L  ++  + + G   +  +              
Sbjct: 63  SNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVI-------------- 108

Query: 433 TSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
           T+ G++F+WG  DKG+LG G   KE    P+ +  L    + Q+ CG +  +ALT  G +
Sbjct: 109 TTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRL 168

Query: 491 YTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKGA 549
           ++ G   YGQLG+  +     T           + ++A G  H   LT +  V+ WGK +
Sbjct: 169 FSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNS 228

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            GQLG  D+ +++ PTL   L++++V  + CG + T  +
Sbjct: 229 FGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVAL 267



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 137/294 (46%), Gaps = 30/294 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+VF WG     G LG G+       S++ +   PK ++S     V  I CGA H + +T
Sbjct: 112 GEVFSWGRN-DKGQLGRGK------LSKEEERK-PKLMKSLAVCTVVQITCGANHCLALT 163

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             G +FSWG    G+LG G        PQ I  L G+ +  +A G  H+  +T S  ++ 
Sbjct: 164 DDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFG 223

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG  ++  G LG   +     P  +  +L    + YISCG  HT  +T  G +F+FG G 
Sbjct: 224 WGKNSF--GQLGLNDEYDKSHP-TLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGG 280

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           FG LGH    +  +P+ V  L G   ++V+CG  HT A              S S GK++
Sbjct: 281 FGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAF-------------SPSSGKMY 327

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            +G G  G+LG GD   R  P    P++  N    + G  LS  +   G +Y +
Sbjct: 328 AFGSGGSGQLGLGDTSARNSP---FPILSPNFP--STGRRLSQVMDHDGSLYLV 376


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 168/372 (45%), Gaps = 52/372 (13%)

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVE 299
           +M+  + N  C A+   L      + SWG    G+LG+G E   +S P  +++LS  ++ 
Sbjct: 81  SMSFKLQNAECDAKQQKL------LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDII 134

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS----CWIPRKVSGNLDGIHLSY 355
            V      + AVT  G +YTWG      G L     +S      +P  +      +    
Sbjct: 135 QVNASGDISAAVTSQGQIYTWGK--TRGGSLSQQKSLSRATNLLLPTLIVA--PEVQFVQ 190

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS------TSIPREVE----------T 399
           ++CG  H A VT  G L T+G+   G LGH   +       +  PR              
Sbjct: 191 VACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGA 250

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L   +  + SCG  HTA +              T  G+++TWG G  G LGHG+ +    
Sbjct: 251 LESKKIIQASCGFQHTACL--------------TQDGEVYTWGFGKNGALGHGNWDQVDL 296

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDG 516
           P+ V  L   NI ++ CG D + AL   G++Y+ GS  YGQLG     +    VP ++  
Sbjct: 297 PKKVEGL--SNIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQL 354

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
               S V +++CG  H A L    + + WG G +GQLGH +K N N P  ++F +   ++
Sbjct: 355 PHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTEP--LR 412

Query: 577 RVVCGLNFTAII 588
           RVVCG   T +I
Sbjct: 413 RVVCGGGHTGVI 424



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 167/375 (44%), Gaps = 54/375 (14%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEI 265
           WG G  NG LG G   +  S        +P  V+     D+  +      +  VT QG+I
Sbjct: 102 WGNG-QNGQLGNGNETLSLS--------IPSPVQVLSDEDIIQVNASGDISAAVTSQGQI 152

Query: 266 FSWGEESGGRLGH----GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           ++WG+  GG L       R  ++  P LI +   V    VACG+ H   VT+ G L TWG
Sbjct: 153 YTWGKTRGGSLSQQKSLSRATNLLLPTLI-VAPEVQFVQVACGKTHLAGVTKDGKLITWG 211

Query: 322 DGTYNSGLLGHG------SKVSCWIPRK---------VSGNLDGIHLSYISCGLWHTAVV 366
           +   + G LGH       SK   + PR          V G L+   +   SCG  HTA +
Sbjct: 212 NP--DQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACL 269

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G ++T+G G  GALGHG+     +P++VE L  +   ++ CG+ +T A+        
Sbjct: 270 TQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLSNI--VKIDCGMDYTFAL-------- 319

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLG--HGDKEPRLFP-ECVAPLIDENICQVACGHDLSVA 483
                    G +++WG    G+LG    +      P +   P    ++  ++CG + S  
Sbjct: 320 ------DKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAF 373

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           L   G  +  G    GQLG      L  P ++  E  E  +  V CG  H   +T+  K+
Sbjct: 374 LNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKL--EFTEP-LRRVVCGGGHTGVITTAGKL 430

Query: 543 YTWGKGANGQLGHGD 557
           + +G+G +GQLG GD
Sbjct: 431 FLFGRGRDGQLGRGD 445



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 30/241 (12%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           +CG +H   +T+ GE+++WG    G LGHG    V  P+ +E LS  N+  + CG  +T 
Sbjct: 260 SCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTF 317

Query: 310 AVTRSGDLYTWGD------GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           A+ + G++Y+WG       GT  S +  H   +   +P   S      H+  ISCG  H+
Sbjct: 318 ALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSS------HVVDISCGEEHS 371

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A +   G  F +G G+ G LGH +  + + P+++E    LR  RV CG  HT  +     
Sbjct: 372 AFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTEPLR--RVVCGGGHTGVI----- 424

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T+ GKLF +G G  G+LG GD    +    + P    NI Q      L +A
Sbjct: 425 ---------TTAGKLFLFGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIA 475

Query: 484 L 484
           L
Sbjct: 476 L 476


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 168/342 (49%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H  LVT+ G++F +G  + G+LG G +  V+ P  ++ L    V+L ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHG---SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
              T  G+LY  G    N G LG G    + S  +      N  G  +  ++ G   +A 
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFF--NKQGP-IKMLAAGSNTSAA 155

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G L+  GD S G +G G   +   P+EV    G R   VSCG +H+A V V     
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVD---- 209

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVA 483
                     G L+T+G+ D G+LG   ++      P+ V  + D  + QVACG   +VA
Sbjct: 210 ----------GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVA 258

Query: 484 LTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           LT +  VY+ G   +GQL  G  + +  +P RV     +  V+  ACG  H A +T    
Sbjct: 259 LTEN-EVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALITDNGL 316

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G+++  N+  PTL     D  V  V CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G L+ +G  + N G LG G+K +   P  V   L    +   +CG 
Sbjct: 41  ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGR 97

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V TS G+L+  G  + G LG GD                RT+      ++    + 
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+L+  GD  +G++G G +   L P+ V+  + + +  V+CG+  
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+    +A+  VP +V  +I +  V+ VACG  H  ALT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVT-DIPDRVVQ-VACGGGHTVALT 260

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             ++VY++G G  GQLGHG     +  P +V+  +  +VK   CG N TA+I
Sbjct: 261 E-NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 39/314 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T +G +++ G  + G+LG G   D +   L+E  +
Sbjct: 79  PTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFN 138

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               ++++A G   + A+T+ G LY  GD +   G +G G + +   P++VS    G  +
Sbjct: 139 KQGPIKMLAAGSNTSAALTQDGRLYMRGDNS--EGQIGLGKESNALTPQEVSV---GKRV 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETLRGLRTTR 407
            ++SCG +H+A VT  G L+TFG+   G LG    +ST       +P++V  +   R  +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFGEKDSGKLG----LSTEKLANHKVPQQVTDIPD-RVVQ 248

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAP 465
           V+CG  HT A+                  +++++G G  G+LGHG    E RL P  V  
Sbjct: 249 VACGGGHTVALTE---------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVVEH 292

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESF 522
                +   ACG + +  +T +G +YT G   +G+LG+      +   PT       +  
Sbjct: 293 FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP-RFLDYH 351

Query: 523 VEEVACGAYHVAAL 536
           V  V CG  H+  L
Sbjct: 352 VHSVTCGGCHMLVL 365



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 35/230 (15%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +  +G +FTFG   F         + + P +   L+     R+SCG  HTA V       
Sbjct: 9   IPESGAVFTFGKSKF---------ADNAPSKF-WLKNDVPLRISCGDEHTALV------- 51

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  GKLF +G  + G+LG G K     P CV  L  E +   ACG   ++  T
Sbjct: 52  -------TENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFT 104

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTSTS 540
           + G++Y  G    GQLG+    G    R    + E F     ++ +A G+   AALT   
Sbjct: 105 SRGNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDG 160

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           ++Y  G  + GQ+G G + N  +P  V     K+V  V CG   +A + +
Sbjct: 161 RLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQ 288
           ++ LP+ VE      V + ACG  H  L+T  G ++++G+   G+LG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 289 LIEILSGVNVELVACGEYHTCAVTR 313
           L       +V  V CG  H   + +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVLAK 367


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 158/320 (49%), Gaps = 35/320 (10%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           P+ +  L G  +  V+CG  HT A+T SG +Y+WG G+   G LGHG   S  +P+K++ 
Sbjct: 44  PKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSM--GQLGHGDLKSINVPQKIAF 101

Query: 347 -NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST---SIPREVETLRG 402
              +G+ + Y+SCG  H+A VT+ G L+ +G+  +G LG          S P +   L G
Sbjct: 102 FEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEG 161

Query: 403 L---RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG------- 452
           +      +VSCG  HTAA+              T+ G+++ WG GD G+LG G       
Sbjct: 162 VADESVVKVSCGGTHTAAL--------------TNLGRVYVWGRGDSGQLGIGSAWLKDT 207

Query: 453 DKEPRLF---PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADG 508
           D    L    P  V     E + QVACG   S A+T  GHVY  G   YG LGV   +D 
Sbjct: 208 DDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQ 267

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
             P RV+    +     V+CG +H   +  +   Y +G+G  G+LG GD  +R  P LV 
Sbjct: 268 QTPKRVE-FFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVK 326

Query: 569 FLKDKQVKRVVCGLNFTAII 588
            LK + V +  CG + T  +
Sbjct: 327 ALKGQTVIQAACGGSHTLFV 346



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 42/319 (13%)

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH---PQLIEILSGV--- 296
            L V  ++CG  H+  VT  G ++ WGE   G+LG  +E + +H   P    +L GV   
Sbjct: 106 GLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADE 165

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-------------PRK 343
           +V  V+CG  HT A+T  G +Y WG G  +SG LG GS    W+             P  
Sbjct: 166 SVVKVSCGGTHTAALTNLGRVYVWGRG--DSGQLGIGS---AWLKDTDDNGLLGVSRPHL 220

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V G  +G  +  ++CG +H+A VT  GH++ +G   +G LG G       P+ VE    +
Sbjct: 221 VEG-FNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDI 279

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              RVSCG WHT  V  + D               + +G G+ GRLG GD + R  P  V
Sbjct: 280 PALRVSCGGWHTMVVAKSGDC--------------YAFGRGEYGRLGLGDTKSRTRPHLV 325

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESF 522
             L  + + Q ACG   ++ +T+ G  Y  G   +G+LG+     L VPTR+D  +    
Sbjct: 326 KALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD--LGPIP 383

Query: 523 VEEVACGAYHVAALTSTSK 541
           V +V+ G  H  ALT +S+
Sbjct: 384 VRQVSAGGAHSMALTHSSR 402



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 170/368 (46%), Gaps = 40/368 (10%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            PK +   +  ++  ++CG+RH + +T  G ++SWG  S G+LGHG    ++ PQ I   
Sbjct: 43  FPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFF 102

Query: 294 --SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDG 350
              G+ V+ V+CG  H+ AVT  G LY WG+  +   GL           P K    L+G
Sbjct: 103 EQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCP-LLEG 161

Query: 351 I---HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH----------ISTSIPREV 397
           +    +  +SCG  HTA +T+ G ++ +G G  G LG G            +  S P  V
Sbjct: 162 VADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLV 221

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           E   G +  +V+CG +H+AAV              T  G ++ WG  D G LG G    +
Sbjct: 222 EGFNGEKVVQVACGAFHSAAV--------------TEQGHVYIWGKEDYGMLGVGQTSDQ 267

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
             P+ V    D    +V+CG   ++ +  SG  Y  G   YG+LG+    G   +R    
Sbjct: 268 QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGL----GDTKSRTRPH 323

Query: 518 IAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
           + ++     V + ACG  H   +TS    Y  G+  +G+LG  D    + PT +D L   
Sbjct: 324 LVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD-LGPI 382

Query: 574 QVKRVVCG 581
            V++V  G
Sbjct: 383 PVRQVSAG 390



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 140/270 (51%), Gaps = 39/270 (14%)

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
            P+++ G L G  +  +SCG  HT  +T++G ++++G GS G LGHGD  S ++P+++  
Sbjct: 43  FPKQLGGLL-GEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAF 101

Query: 400 LR--GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG---HGDK 454
               GL+   VSCG  H+AAV              T+ G L+ WG+   G+LG     + 
Sbjct: 102 FEQEGLKVDYVSCGGCHSAAV--------------TNDGTLYMWGETHWGQLGLPKEFEA 147

Query: 455 EPRLFP-ECVAPLI----DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA--- 506
               FP +C  PL+    DE++ +V+CG   + ALT  G VY  G    GQLG+  A   
Sbjct: 148 AHESFPVKC--PLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLK 205

Query: 507 ----DGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
               +GL+    P  V+G   E  V+ VACGA+H AA+T    VY WGK   G LG G  
Sbjct: 206 DTDDNGLLGVSRPHLVEGFNGEKVVQ-VACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQT 264

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            ++ +P  V+F  D    RV CG   T ++
Sbjct: 265 SDQQTPKRVEFFDDIPALRVSCGGWHTMVV 294



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 118/242 (48%), Gaps = 16/242 (6%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD--ALL----PK 236
           SVV  S  G+      +LG V++WG G +      G+  +G ++ + TD   LL    P 
Sbjct: 166 SVVKVSCGGTHTAALTNLGRVYVWGRGDS------GQLGIGSAWLKDTDDNGLLGVSRPH 219

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
            VE      V  +ACGA H+  VT+QG ++ WG+E  G LG G+ +D   P+ +E    +
Sbjct: 220 LVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDI 279

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
               V+CG +HT  V +SGD Y +G G Y  G LG G   S   P  V   L G  +   
Sbjct: 280 PALRVSCGGWHTMVVAKSGDCYAFGRGEY--GRLGLGDTKSRTRPHLVKA-LKGQTVIQA 336

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           +CG  HT  VTS G  +  G    G LG  D    S+P  ++ L  +   +VS G  H+ 
Sbjct: 337 ACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAGGAHSM 395

Query: 417 AV 418
           A+
Sbjct: 396 AL 397


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 179/391 (45%), Gaps = 44/391 (11%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           R+G+S    ++ L P+ V + + + +  +ACG  H   V   G +++WG    G+LGH  
Sbjct: 15  RLGHSLEYASEEL-PRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDS 73

Query: 281 E-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
           E ++V  P   E+     V  ++ G YHT  V  SG +  W  G    G LG G  V   
Sbjct: 74  EDSEVGLPG--EVAMPERVVALSAGYYHTLCVGESGSV--WSFGCNGKGQLGLGKDVVLV 129

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-----ISTSI- 393
              ++  +L    +  ++ G+ H+  +T+ G ++++G+ + G LGHG         +SI 
Sbjct: 130 REPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIE 189

Query: 394 --PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
             PR V     LR  +VS G  H+AAV  A D+              F WG G   +LG 
Sbjct: 190 FLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDA--------------FLWGYGKFHQLGF 235

Query: 452 GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
           G  E    P  + PL   +   VACG   S+AL   GHV   G+   G LG        P
Sbjct: 236 GSDEDLAGPTVLPPL-KGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQP 294

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG--------------KGANGQLGHGD 557
            R   ++     E++A G  H AA+T + K+YTWG               G  GQLGHG+
Sbjct: 295 KRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGN 353

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +  SP  VD+L   +   V CG+N TA I
Sbjct: 354 DFDYWSPHHVDWLSLTETDLVACGMNHTAAI 384



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 21/233 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG   ANG LG G       F    +  LP+ V +  AL V  ++ G  H+  V+
Sbjct: 160 GEVYSWGN-AANGRLGHGSATPRRLFGSSIE-FLPRLVRAFEALRVEQVSAGQMHSAAVS 217

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G+ F WG     +LG G + D++ P ++  L G +   VACG  H+ A+   G +  W
Sbjct: 218 TAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-STAAVACGSLHSLALQYGGHVLAW 276

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---- 376
           G  T  +G+LG G +     P++ S  + G+    I+ G  H+A VT +G L+T+G    
Sbjct: 277 G--TNQNGVLGQGHEKQQ-QPKRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGS 332

Query: 377 ----------DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                      G+ G LGHG+      P  V+ L    T  V+CG+ HTAA+V
Sbjct: 333 QGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIV 385



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 113/229 (49%), Gaps = 29/229 (12%)

Query: 372 LFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           L TFG+G  G LGH  ++ S  +PR V  L G+    V+CG  HTAAV    D S     
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAV----DDS----- 55

Query: 431 GSTSCGKLFTWGDGDKGRLGHG--DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                G ++TWG  DKG+LGH   D E  L  E   P   E +  ++ G+  ++ +  SG
Sbjct: 56  -----GTVYTWGLNDKGQLGHDSEDSEVGLPGEVAMP---ERVVALSAGYYHTLCVGESG 107

Query: 489 HVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            V++ G    GQLG+     LV   R+   + ++ V  VA G  H  ALT+  +VY+WG 
Sbjct: 108 SVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGN 167

Query: 548 GANGQLGHGDKDNRN--------SPTLVDFLKDKQVKRVVCGLNFTAII 588
            ANG+LGHG    R          P LV   +  +V++V  G   +A +
Sbjct: 168 AANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAV 216


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 159/313 (50%), Gaps = 35/313 (11%)

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           +VT+  E++ WG  S  +L  G +  +  P+L    +  N + +  G+Y T  V   G +
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTV 429

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGN----LDGIHLSYISCGLWHTAVVTSAGHLF 373
              G G+Y  G LG G   +    +K++ +    +  I  S  S G  HT  +T+ G +F
Sbjct: 430 RACGKGSY--GRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDG--HTLALTADGEVF 485

Query: 374 TFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           ++GDG +G LGHG+  +   P++++  L+G     +S G  H+AAV              
Sbjct: 486 SWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAV-------------- 531

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGHDLSVA 483
           T  G+LFTWG+GD GRLGHGD   +L          P+ +  L+   I +V CG   S+A
Sbjct: 532 TEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLA 591

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           LT++G ++  G  A    G P +  L P  V+ E+A + + +VACG  H  ALT  ++VY
Sbjct: 592 LTSTGQLFAWGCGACLGCGSPESTALRPKLVE-ELANTRIVDVACGDSHCLALTHDNEVY 650

Query: 544 TWGKGANGQLGHG 556
            WG  A GQ G G
Sbjct: 651 AWGNNAMGQCGQG 663



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 165/367 (44%), Gaps = 59/367 (16%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V++WG   ++    G + ++          L PK   S    +   I  G     +V  
Sbjct: 378 EVYVWGSNSSHQLAEGSQEKI----------LQPKL--SPAFANAQTIEAGQYCTFVVYS 425

Query: 262 QGEIFSWGEESGGRLGHG--------READVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
            G + + G+ S GRLG G        ++ +  H  +I  +S          + HT A+T 
Sbjct: 426 DGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSK-----GSDGHTLALTA 480

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G++++WGDG Y  G LGHG+  +   P+++ G L G  +  IS G  H+A VT  G LF
Sbjct: 481 DGEVFSWGDGDY--GKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELF 538

Query: 374 TFGDGSFGALGHGD------HISTS---IPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           T+G+G +G LGHGD      H  T+    P+ +E L GL   +V CG             
Sbjct: 539 TWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCG------------- 585

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR-LFPECVAPLIDENICQVACGHDLSVA 483
            S S    TS G+LF WG G    LG G  E   L P+ V  L +  I  VACG    +A
Sbjct: 586 -SQSSLALTSTGQLFAWGCG--ACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLA 642

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHV---AALTS 538
           LT    VY  G+ A GQ G   +   +  P +V G +    V +++ G  H     AL +
Sbjct: 643 LTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVG-LDGVTVHQISAGTSHSLAWTALPT 701

Query: 539 TSKVYTW 545
             +V  W
Sbjct: 702 DRQVVAW 708



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 20/146 (13%)

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           GH L  ALT  G V++ G   YG+LG    +    P ++ G +    V+ ++ G  H AA
Sbjct: 473 GHTL--ALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAA 530

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNR---------NSPTLVDFLKDKQVKRVVCG----L 582
           +T   +++TWG+G  G+LGHGD + +           P +++ L    +++V CG    L
Sbjct: 531 VTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSL 590

Query: 583 NFTAIICLHKWVSSVDHSVCSSCHNP 608
             T+   L  W        C  C +P
Sbjct: 591 ALTSTGQLFAWGC----GACLGCGSP 612


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 154/303 (50%), Gaps = 25/303 (8%)

Query: 218 GEHRVGYSFSRQT---DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGG 274
           G + VG    RQT   D   P  V++     +  IACG +H++ + + G+ FSWG +S G
Sbjct: 60  GSNEVG-QLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118

Query: 275 RLGH--GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
           +LG   G  A    P++I+ L+  NV  VACG YHT  +T +GDLY WG  +Y    LG+
Sbjct: 119 QLGSNLGSHAQ-DKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGN 177

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
            S      P+ +S  L GI ++ I+CG  HT  ++ +G +F +G  S G LG  D  S  
Sbjct: 178 RSNKET-TPQALSSIL-GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRC 235

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P  ++TLR ++   +SCG   TA + +               G +FT G G+ G+ GHG
Sbjct: 236 YPTHLKTLRNVKVCHISCGEDFTAFLTLD--------------GGVFTCGAGEYGQTGHG 281

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVP 511
           + +  L P  V  L+   + QVACG    +       +   G  A GQLG P +A  LVP
Sbjct: 282 NTKDELVPRKVMELMGSTVTQVACGRR-HMLCRVGERILACGYGARGQLGCPHMAFALVP 340

Query: 512 TRV 514
           T V
Sbjct: 341 TPV 343



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 21/327 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEILSGVNVELVACG 304
           +  I+ G  H + ++  G +++ G    G+LG     AD + P L++   G  +  +ACG
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACG 96

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
             H+ A+   G  ++WG  +   G LG           K+   L   ++  ++CG +HT 
Sbjct: 97  LQHSMALDEWGQPFSWGSDS--MGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTV 154

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           V+T+ G L+ +G  S+G  G G+  +  + P+ + ++ G+    ++CG  HT A+     
Sbjct: 155 VLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFAL----- 209

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    +  G +F WG    G+LG  D+E R +P  +  L +  +C ++CG D +  
Sbjct: 210 ---------SQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAF 260

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           LT  G V+T G+  YGQ G     D LVP +V  E+  S V +VACG  H+       ++
Sbjct: 261 LTLDGGVFTCGAGEYGQTGHGNTKDELVPRKV-MELMGSTVTQVACGRRHMLCRVG-ERI 318

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDF 569
              G GA GQLG         PT V F
Sbjct: 319 LACGYGARGQLGCPHMAFALVPTPVTF 345



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 141/281 (50%), Gaps = 25/281 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG+ T++   +     +   I   +S   +  H+  IS G +HT  +++ GHL+T G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 377 DGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
               G LG   +    + P  V+T +G   + ++CG+ H+ A+                 
Sbjct: 61  SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMAL--------------DEW 106

Query: 436 GKLFTWGDGDKGRLG-----HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
           G+ F+WG    G+LG     H   +P++    +  L  +N+ QVACG   +V LT +G +
Sbjct: 107 GQPFSWGSDSMGQLGSNLGSHAQDKPKI----IKTLATKNVIQVACGSYHTVVLTNNGDL 162

Query: 491 YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           Y  G+ +YGQ G+   ++     +    I    +  +ACG+ H  AL+ +  V+ WGK +
Sbjct: 163 YAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNS 222

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +GQLG  D+++R  PT +  L++ +V  + CG +FTA + L
Sbjct: 223 HGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTL 263



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 19/258 (7%)

Query: 166 NSNDRSSAA--ETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           NS D +S    +TF+  +LS++     H  A    D  G  F WG   + G LG     +
Sbjct: 72  NSADGTSPVLVDTFKGCTLSTIACGLQHSMA---LDEWGQPFSWGSD-SMGQLGSN---L 124

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-RE 281
           G   S   D   PK +++    +V  +ACG+ H V++T  G++++WG  S G+ G G R 
Sbjct: 125 G---SHAQDK--PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRS 179

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
              + PQ +  + G+ + L+ACG  HT A+++SG ++ WG  ++  G LG   + S   P
Sbjct: 180 NKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSH--GQLGLQDRESRCYP 237

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
             +   L  + + +ISCG   TA +T  G +FT G G +G  GHG+     +PR+V  L 
Sbjct: 238 THLK-TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELM 296

Query: 402 GLRTTRVSCGVWHTAAVV 419
           G   T+V+CG  H    V
Sbjct: 297 GSTVTQVACGRRHMLCRV 314



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 25/324 (7%)

Query: 265 IFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +F WG  +   L     G    V  P L +     +++ ++ GE+HT  ++ +G LYT G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                 G LG  +  +      +     G  LS I+CGL H+  +   G  F++G  S G
Sbjct: 61  SN--EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118

Query: 382 ALGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            LG   G H +   P+ ++TL      +V+CG +HT  +              T+ G L+
Sbjct: 119 QLGSNLGSH-AQDKPKIIKTLATKNVIQVACGSYHTVVL--------------TNNGDLY 163

Query: 440 TWGDGDKGRLGHGDKEPR-LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG    G+ G G++  +   P+ ++ ++   I  +ACG + + AL+ SG V+  G  ++
Sbjct: 164 AWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSH 223

Query: 499 GQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+   +    PT +   +    V  ++CG    A LT    V+T G G  GQ GHG+
Sbjct: 224 GQLGLQDRESRCYPTHLK-TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGN 282

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
             +   P  V  L    V +V CG
Sbjct: 283 TKDELVPRKVMELMGSTVTQVACG 306



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 13/184 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GD++ WG   AN +   G+  +G   +++T    P+A+ S + + +  IACG+ H   ++
Sbjct: 160 GDLYAWG---ANSY---GQCGLGNRSNKETT---PQALSSILGIPIALIACGSNHTFALS 210

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +F WG+ S G+LG        +P  ++ L  V V  ++CGE  T  +T  G ++T 
Sbjct: 211 QSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTC 270

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G Y  G  GHG+     +PRKV   L G  ++ ++CG  H  +      +   G G+ 
Sbjct: 271 GAGEY--GQTGHGNTKDELVPRKVM-ELMGSTVTQVACGRRH-MLCRVGERILACGYGAR 326

Query: 381 GALG 384
           G LG
Sbjct: 327 GQLG 330


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 28/307 (9%)

Query: 289  LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSG- 346
            L+E+ +     ++ CG  HT A+ R+G +YTWG      G LG G  +S   +P  +S  
Sbjct: 816  LVELFNKKINSVLNCGYGHT-ALIRNGTIYTWGQTV--KGCLGQGPTMSRHSLPSPISLL 872

Query: 347  NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            N   + + Y++CG  HT  +T+ G ++ +G   +G LG GD   +  PR + +L      
Sbjct: 873  NCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVI 931

Query: 407  RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
             +SCG +HT A+              T  G++F WG G  G+LG G+ + +  P CV  L
Sbjct: 932  TLSCGQFHTLAL--------------TEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHL 977

Query: 467  IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDG------EIA 519
             D+ I  +A GH  S+ L+  G +++ GS  +GQLG        VP  + G       IA
Sbjct: 978  KDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIA 1037

Query: 520  ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              +   ++CG +H A LT +  VYTWG+  +GQLG+G      +PT ++     +   + 
Sbjct: 1038 TGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQIN-ENTFKADCIS 1096

Query: 580  CGLNFTA 586
            CG  FTA
Sbjct: 1097 CGCEFTA 1103



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 177/365 (48%), Gaps = 51/365 (13%)

Query: 172  SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
            +  E F   ++SV++    G  H      G ++ WG+ +  G LG G     +S      
Sbjct: 815  TLVELFNKKINSVLNC---GYGHTALIRNGTIYTWGQTVK-GCLGQGPTMSRHSLPS--- 867

Query: 232  ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
               P ++ +   L+V  +ACG  H   +T  G +++WG    G+LG G   +  +P+LI 
Sbjct: 868  ---PISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLIT 923

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L+  NV  ++CG++HT A+T  G ++ WG G +  G LG G+     +P  V+   D +
Sbjct: 924  SLANENVITLSCGQFHTLALTEKGQVFAWGWGVH--GQLGLGNIDDQRLPVCVNHLKDQV 981

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG---LRTT-- 406
             +  I+ G  H+ V++  G +F+FG G FG LG G+   +S+P  ++ +     L  T  
Sbjct: 982  -IKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGY 1040

Query: 407  --RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
               +SCG  H+A + V+              G ++TWG    G+LG+G  +     E  A
Sbjct: 1041 FHSISCGCHHSALLTVS--------------GGVYTWGRSLDGQLGNGGHK-----EVTA 1081

Query: 465  PL-IDENICQ---VACGHDLSVAL-TTSGHVYTMGSAAYGQ-----LGVPVADGLVPTRV 514
            P  I+EN  +   ++CG + + A    +G ++  GS + GQ     L +PV +    + +
Sbjct: 1082 PTQINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQVRVTNLAIPVKESATKS-L 1140

Query: 515  DGEIA 519
            DG++ 
Sbjct: 1141 DGKLV 1145


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 29/369 (7%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           V+ WG  +     LGG E             LLP+ ++   +  V   ACG  H +L+TK
Sbjct: 3   VYCWGNTVHGELGLGGIEDE---------QVLLPREMDWCHSSSVQQAACGTSHTLLLTK 53

Query: 262 QGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            G++FS G    G+LGH  +      PQ I  L    V  V+CG  H+ A+T  G +++W
Sbjct: 54  DGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G  +   G LGH + +  +   ++   +    +  I+ G +H+  +T++G LF++G   +
Sbjct: 114 GSNSI--GQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGY 171

Query: 381 GALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG G      + P  V++L G+    ++CG  H+ AV              +  G +F
Sbjct: 172 GQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAV--------------SKSGAIF 217

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG  D   R FP+ +  L +  +  ++CG D S  LT  G V+T G+  +G
Sbjct: 218 GWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFG 277

Query: 500 QLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDK 558
           QLG       +  R+  E+  S + ++ACG  H  A   S  K+Y +G G  GQLG G  
Sbjct: 278 QLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVI 337

Query: 559 DNRNSPTLV 567
            N N+P +V
Sbjct: 338 SNYNTPQIV 346



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 28/325 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG    G LG G   +  V  P+ ++     +V+  ACG  HT  +T+ G L++ G+
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 323 GTYNSGLLGHGSKVSCWIPRK---VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              + G LGH +     +P K      +L+   ++++SCG  H+  +T+ G +F++G  S
Sbjct: 63  N--DHGQLGHDTDC---LPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 380 FGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH   + T + PR ++T+      +++ G +H+ A+              T+ G+L
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLAL--------------TNSGEL 163

Query: 439 FTWGDGDKGRLGHGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           F+WG    G+LG G   E  + P  V  L    I  +ACG + S A++ SG ++  G   
Sbjct: 164 FSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNT 223

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+  +     P ++   +    V  ++CG    A LT    V+T G G  GQLGHG
Sbjct: 224 FGQLGLNDLVSRCFPQQLK-TLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHG 282

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
              N   P +V  L   ++ ++ CG
Sbjct: 283 TCSNEILPRMVFELMGSKITQIACG 307



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI---SCGLWHTAVVTSAGHLF 373
           +Y WG+  +    LG        +PR+    +D  H S +   +CG  HT ++T  G LF
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPRE----MDWCHSSSVQQAACGTSHTLLLTKDGKLF 58

Query: 374 TFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           + G+   G LGH  D +    P+ + +L     T VSCG  H+ A+              
Sbjct: 59  SCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLAL-------------- 104

Query: 433 TSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
           T+ G++F+WG    G+LGH  D +    P  +  +  + + Q+A G   S+ALT SG ++
Sbjct: 105 TNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELF 164

Query: 492 TMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           + G+  YGQLG+    + +V   +   +A   +  +ACG  H  A++ +  ++ WGK   
Sbjct: 165 SWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTF 224

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D  +R  P  +  L++  V+ + CG +F+A +
Sbjct: 225 GQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFL 262


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 181/367 (49%), Gaps = 28/367 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F WG  I +G LG G     + F+       PKA++   A  V   A GA H + +TK 
Sbjct: 1   MFGWGSTI-HGELGLGGIEEEHVFT-------PKALDWFEAKSVMKAALGANHTLFLTKD 52

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G+++S G    G+LGH +      PQL+  L   ++  VACGE H+ A++R G++++WG 
Sbjct: 53  GKVYSCGSNDYGQLGHDQPR--KRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGS 110

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             Y  G LGH    +  I  K+  +L    +  I+ G  H+  +T+AG +F +G   FG 
Sbjct: 111 DNY--GQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQ 168

Query: 383 LGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG G      S P  V +L G+    ++CG  HT AV              +  G +F W
Sbjct: 169 LGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAV--------------SKSGAVFGW 214

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G+LG  D   + FP  +  L +  +  ++CG + S  LT  G V++ G+  YGQL
Sbjct: 215 GKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQL 274

Query: 502 GVPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G       +  R   E+  S + +++CG  H +A + S  +VY++G G  GQLG     N
Sbjct: 275 GHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSYGLGGAGQLGLRKPSN 334

Query: 561 RNSPTLV 567
            ++P +V
Sbjct: 335 ASTPQVV 341



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 115/220 (52%), Gaps = 13/220 (5%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+VF WG     G LG   H++G      T  ++PK ++S     V  IA G RH+V +T
Sbjct: 103 GEVFSWGSD-NYGQLG---HQLG-----GTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153

Query: 261 KQGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             GEIF WG    G+LG G      S P  +  LSG+   L+ACG  HT AV++SG ++ 
Sbjct: 154 NAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFG 213

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG     +G LG    VS   P ++   L    + +ISCG   +  +T  G +F+ G G 
Sbjct: 214 WGKNI--NGQLGLNDTVSKKFPTQLR-TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGM 270

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           +G LGHG   +  +PR+V  L G   T++SCG  H+ A V
Sbjct: 271 YGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFV 310



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 27/323 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   E  V  P+ ++     +V   A G  HT  +T+ G +Y+ G 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             Y  G LGH        P+ VSG LD   +  ++CG  H+  ++  G +F++G  ++G 
Sbjct: 61  NDY--GQLGHDQPRKR--PQLVSG-LDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQ 115

Query: 383 LGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           LGH  G  +   +P+ +++L   +  +++ G  H+ A+              T+ G++F 
Sbjct: 116 LGHQLGGTLQI-VPKLIKSLAKYQVVQIAAGQRHSVAL--------------TNAGEIFV 160

Query: 441 WGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           WG  D G+LG G   P    P  V  L       +ACG + + A++ SG V+  G    G
Sbjct: 161 WGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNING 220

Query: 500 QLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           QLG+        PT++   +  S V  ++CG      LT    V++ G G  GQLGHG  
Sbjct: 221 QLGLNDTVSKKFPTQLR-TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGT 279

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
            N   P  V  L    + ++ CG
Sbjct: 280 SNEILPRQVLELMGSTITQISCG 302



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 21/277 (7%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   +    LG   +   + P+ +    +   +   + G  HT  +T  G +++ G
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDW-FEAKSVMKAALGANHTLFLTKDGKVYSCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
              +G LGH        P+ V  L       V+CG  H+ A+              +  G
Sbjct: 60  SNDYGQLGHDQ--PRKRPQLVSGLDAYSIINVACGEMHSLAL--------------SRWG 103

Query: 437 KLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG  + G+LGH      ++ P+ +  L    + Q+A G   SVALT +G ++  G+
Sbjct: 104 EVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGA 163

Query: 496 AAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
             +GQLG+         PT V       F   +ACGA H  A++ +  V+ WGK  NGQL
Sbjct: 164 NDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVFGWGKNINGQL 222

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           G  D  ++  PT +  L++ +V+ + CG  F+  + L
Sbjct: 223 GLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTL 259



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 13/176 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG   AN F   G+  +G     ++    P  V S   +    IACGA H   V+
Sbjct: 156 GEIFVWG---ANDF---GQLGLGTITPYEST---PTTVCSLSGIPFALIACGANHTFAVS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G +F WG+   G+LG         P  +  L    V  ++CG+  +  +T  G +++ 
Sbjct: 207 KSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSC 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTF 375
           G G Y  G LGHG   +  +PR+V   L G  ++ ISCG  H+ A V S G ++++
Sbjct: 267 GAGMY--GQLGHGGTSNEILPRQVL-ELMGSTITQISCGRQHSLAFVPSRGRVYSY 319


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 156/319 (48%), Gaps = 27/319 (8%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           RI +S V    SH +A     + G +F WG G   G LG G+         +TD   P+ 
Sbjct: 8   RIKISRVACGWSHTAA---ISAKGLLFTWGMG-RYGRLGHGD---------ETDQNAPRL 54

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READV---SHPQLIEI 292
           V   +  ++  +A G RH    ++ GE++SWG+ + G LGHG  +E D    + P+LIE 
Sbjct: 55  VGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEY 114

Query: 293 LSGV---NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNL 348
           LS V    V  VACG YHT   T     Y WGDG +     G    +   W P+ + G L
Sbjct: 115 LSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSI-GAL 173

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
            G  +  I+CG  H AV+   G L+T+G+G+ G LGHGD      P +V +LRG R  ++
Sbjct: 174 AGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQI 233

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CG  H AA+   +D       G T CG+L   G+  K    H +   +  P  V PL  
Sbjct: 234 ACGFAHMAAL---SDKGEVFVCG-TGCGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRG 289

Query: 469 ENICQVACGHDLSVALTTS 487
             I QVACG   ++ L  +
Sbjct: 290 LQILQVACGMISTIVLQNT 308



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 50/329 (15%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           V S   + +  +ACG  H   ++ +G +F+WG    GRLGHG E D + P+L+  L   N
Sbjct: 3   VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTN 62

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS------------KVSCWIPRKVS 345
           +  VA GE HT A + +G+LY+WGD   N G+LGHG             K+  ++ R + 
Sbjct: 63  IVGVALGERHTAAFSETGELYSWGDA--NFGVLGHGELQEGDPQIQTTPKLIEYLSRVLR 120

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI---PREVETLRG 402
                  +++++CG +HT   T+    + +GDG  G LG G     +I   P+ +  L G
Sbjct: 121 KK-----VTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAG 175

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
               +++CG W   AV++ T             G L+TWG+G  GRLGHGD+E    P  
Sbjct: 176 RGVQQIACG-WAHCAVLMDT-------------GDLYTWGEGAGGRLGHGDEEDHKEPHQ 221

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV------------PVADGLV 510
           VA L    I Q+ACG     AL+  G V+  G+   G+LG+             VA+  +
Sbjct: 222 VASLRGTRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKI 280

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTST 539
           P RV+  +    + +VACG      L +T
Sbjct: 281 PRRVE-PLRGLQILQVACGMISTIVLQNT 308



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 128/256 (50%), Gaps = 29/256 (11%)

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            +L  I +S ++CG  HTA +++ G LFT+G G +G LGHGD    + PR V  L     
Sbjct: 4   ASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNI 63

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE---------P 456
             V+ G  HTAA               +  G+L++WGD + G LGHG+ +         P
Sbjct: 64  VGVALGERHTAAF--------------SETGELYSWGDANFGVLGHGELQEGDPQIQTTP 109

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG----LVPT 512
           +L  E ++ ++ + +  VACG   ++  T     Y  G   +G LG     G      P 
Sbjct: 110 KLI-EYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQ 168

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            + G +A   V+++ACG  H A L  T  +YTWG+GA G+LGHGD+++   P  V  L+ 
Sbjct: 169 SI-GALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRG 227

Query: 573 KQVKRVVCGLNFTAII 588
            ++ ++ CG    A +
Sbjct: 228 TRIVQIACGFAHMAAL 243



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 156/321 (48%), Gaps = 46/321 (14%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L  + +  VACG  HT A++  G L+TWG G Y  G LGHG +     PR V G L   +
Sbjct: 6   LRRIKISRVACGWSHTAAISAKGLLFTWGMGRY--GRLGHGDETDQNAPRLV-GELLNTN 62

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD------HISTSIPREVETL-RGLR- 404
           +  ++ G  HTA  +  G L+++GD +FG LGHG+       I T+ P+ +E L R LR 
Sbjct: 63  IVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTT-PKLIEYLSRVLRK 121

Query: 405 -TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL-FTWGDGDKGRLGHGDKEPRLF--- 459
             T V+CG +HT                 T+  KL + WGDG  G LG G    R     
Sbjct: 122 KVTHVACGAYHTLC---------------TTADKLTYIWGDGGHGVLGQGGDFGRTIEWT 166

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEI 518
           P+ +  L    + Q+ACG      L  +G +YT G  A G+LG     D   P +V   +
Sbjct: 167 PQSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQV-ASL 225

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG-----------HGDKDNRNSPTLV 567
             + + ++ACG  H+AAL+   +V+  G G  G+LG           H +  N+  P  V
Sbjct: 226 RGTRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRV 284

Query: 568 DFLKDKQVKRVVCGLNFTAII 588
           + L+  Q+ +V CG+  T ++
Sbjct: 285 EPLRGLQILQVACGMISTIVL 305



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 133/283 (46%), Gaps = 30/283 (10%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIAN-GFLGGGEHRVGYSFSRQTDAL 233
           E    ++  V     H +A   F   G+++ WG+  AN G LG GE + G     QT   
Sbjct: 57  ELLNTNIVGVALGERHTAA---FSETGELYSWGD--ANFGVLGHGELQEG-DPQIQTTPK 110

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRL----GHGREADVSHPQL 289
           L + +   +   V ++ACGA H +  T     + WG+   G L      GR  + + PQ 
Sbjct: 111 LIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWT-PQS 169

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I  L+G  V+ +ACG  H   +  +GDLYTWG+G    G LGHG +     P +V+ +L 
Sbjct: 170 IGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGA--GGRLGHGDEEDHKEPHQVA-SLR 226

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----------HGDHISTSIPREVE 398
           G  +  I+CG  H A ++  G +F  G G  G LG           H +  +  IPR VE
Sbjct: 227 GTRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRVE 285

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LRGL+  +V+CG+  T   +V  ++     S ST  G    W
Sbjct: 286 PLRGLQILQVACGMIST---IVLQNTQDEQQSLSTLRGNYNIW 325



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 29/213 (13%)

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           +V +LR ++ +RV+CG  HTAA+              ++ G LFTWG G  GRLGHGD+ 
Sbjct: 2   QVASLRRIKISRVACGWSHTAAI--------------SAKGLLFTWGMGRYGRLGHGDET 47

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRV 514
            +  P  V  L++ NI  VA G   + A + +G +Y+ G A +G LG   + +G    + 
Sbjct: 48  DQNAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQT 107

Query: 515 DGEIAESF-------VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN---SP 564
             ++ E         V  VACGAYH    T+    Y WG G +G LG G    R    +P
Sbjct: 108 TPKLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTP 167

Query: 565 TLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
             +  L  + V+++ CG    A++     L+ W
Sbjct: 168 QSIGALAGRGVQQIACGWAHCAVLMDTGDLYTW 200


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P  +  T    V  +ACG RH + +T  G++++ G     +LGH  +     P LI  
Sbjct: 29  LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    +  + CG  H+ A++  G + +WGD   + G LGH +        KV   L    
Sbjct: 87  LQDYVIIQICCGSRHSLALSDWGQVLSWGDN--DCGQLGHATDKEIVQLPKVVRQLVTKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 26/299 (8%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           ++G+    +   L+P+  +  +      I CG+RH++ ++  G++ SWG+   G+LGH  
Sbjct: 71  QLGHDLPTKRPLLIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 281 EADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK---V 336
           + ++   P+++  L    V  +ACG  H+ A+T  G+LY+WG   Y  G LG  S     
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY--GQLGVNSPNDLT 184

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            C  P +++  L GI L+ I+CG  H+ +++ +G +F +G  + G LG  D  + S P +
Sbjct: 185 HCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ 243

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           ++TLR L    V+CG   +  +              T+ G +FT G G  G+LGHG    
Sbjct: 244 LKTLRTLGVRFVACGDEFSVFL--------------TNEGGVFTCGAGAYGQLGHGFSSN 289

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLGVPVADGLVPTRV 514
            + P  V  L+   I QVACG+  ++AL  S G VY  G  + GQLG      L+  +V
Sbjct: 290 EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         P ++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P  +  L+     ++ CG  H+ A+              +  
Sbjct: 65  GSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLAL--------------SDW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  DKE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV   + L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR+ PT +  L+   V+ V CG  F+  +
Sbjct: 228 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 147/329 (44%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K    IP      L    +  I CG  H+  ++  G + ++GD  
Sbjct: 66  SNDYSQ--LGHDLPTKRPLLIPE-----LQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P     C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P+++     ++ V++VACG  H   LT+T 
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPW-TPDTAVQQVACGHRHTLFLTATG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G     QLGH     R  P L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDYSQLGHDLPTKR--PLLIPELQDYVIIQICCG 98



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 311

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G ++++G  S G+LG      +  PQ++
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P  +  T    V  +ACG RH + +T  G++++ G     +LGH  +     P LI  
Sbjct: 29  LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPE 86

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L    +  + CG  H+ A++  G + +WGD   + G LGH +        KV   L    
Sbjct: 87  LQDYVIIQICCGSRHSLALSDWGQVLSWGDN--DCGQLGHATDKEIVQLPKVVRQLVTKT 144

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVS 409
           +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+    ++
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L   
Sbjct: 205 CGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTL 250

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +VACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310

Query: 530 AYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 26/299 (8%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           ++G+    +   L+P+  +  +      I CG+RH++ ++  G++ SWG+   G+LGH  
Sbjct: 71  QLGHDLPTKRPLLIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 281 EADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK---V 336
           + ++   P+++  L    V  +ACG  H+ A+T  G+LY+WG   Y  G LG  S     
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY--GQLGVNSPNDLT 184

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
            C  P +++  L GI L+ I+CG  H+ +++ +G +F +G  + G LG  D  + S P +
Sbjct: 185 HCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ 243

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           ++TLR L    V+CG   +  +              T+ G +FT G G  G+LGHG    
Sbjct: 244 LKTLRTLGVRFVACGDEFSVFL--------------TNEGGVFTCGAGAYGQLGHGFSSN 289

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTS-GHVYTMGSAAYGQLGVPVADGLVPTRV 514
            + P  V  L+   I QVACG+  ++AL  S G VY  G  + GQLG      L+  +V
Sbjct: 290 EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         P ++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   + T  P  +  L+     ++ CG  H+ A+              +  
Sbjct: 65  GSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLAL--------------SDW 108

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LGH  DKE    P+ V  L+ + + Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168

Query: 495 SAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV   + L     P R+   +    +  +ACG  H   ++ +  V+ WG+   
Sbjct: 169 SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGWGRNNC 227

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR+ PT +  L+   V+ V CG  F+  +
Sbjct: 228 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 147/329 (44%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K    IP      L    +  I CG  H+  ++  G + ++GD  
Sbjct: 66  SNDYSQ--LGHDLPTKRPLLIPE-----LQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL--------------TSCGEL 164

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P     C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 165 YSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACG 310



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P+++     ++ V++VACG  H   LT+T 
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPW-TPDTAVQQVACGHRHTLFLTATG 59

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           KVY  G     QLGH     R  P L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDYSQLGHDLPTKR--PLLIPELQDYVIIQICCG 98



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 311

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G ++++G  S G+LG      +  PQ++
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/344 (34%), Positives = 173/344 (50%), Gaps = 37/344 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IACG  H  L+T+ G++F +G  + G+LG G +  V+ P  ++ L    V+LVACG  HT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH----LSYISCGLWHTA 364
              T  G +Y  G  +   G LG G    C   R     LD       +  ++ G   +A
Sbjct: 101 LICTAKGKVYASGGNS--EGQLGLG---DCE-ERTSFKRLDFFDSQGPIKMLAAGSNTSA 154

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T +G LF +GD + G +G G     S P+EV    G   + VSCG +H+A V V    
Sbjct: 155 ALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSV--GQPISWVSCGYYHSALVTVD--- 209

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-P-RLFPECVAPLIDENICQVACGHDLSV 482
                      G L+T+G+ D G+LG G  + P    P+ V   I E + QVACG   +V
Sbjct: 210 -----------GALYTFGERDSGKLGLGTHQLPGHRVPQLVKS-IKEPVRQVACGGGHTV 257

Query: 483 ALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           AL   G+VYT G   +GQL  G  + +  VP  V+    +    +V CG  H A +T   
Sbjct: 258 AL-AEGNVYTFGLGQFGQLGHGTFIFESRVPRLVE-HFKKGRACQVVCGENHTAVITEDG 315

Query: 541 KVYTWGKGANGQLGHGDKD--NRNSPTL-VDFLKDKQVKRVVCG 581
            +YT+G G +G+LG G+++  N+  PTL + FLK   V+  +CG
Sbjct: 316 LLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLK-YNVQGAMCG 358



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 27/274 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEIL 293
           P  V++  +  V  +ACG  H ++ T +G++++ G  S G+LG G  E   S  +L    
Sbjct: 79  PTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFD 138

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++++A G   + A+T SG L+ WGD T     LG  S+VS   P++VS    G  +
Sbjct: 139 SQGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSS--PQEVS---VGQPI 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S++SCG +H+A+VT  G L+TFG+   G LG G H      +P+ V++++     +V+CG
Sbjct: 194 SWVSCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIK-EPVRQVACG 252

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDE 469
             HT A+                 G ++T+G G  G+LGHG    E R+ P  V      
Sbjct: 253 GGHTVALAE---------------GNVYTFGLGQFGQLGHGTFIFESRV-PRLVEHFKKG 296

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
             CQV CG + +  +T  G +YT G   +G+LG+
Sbjct: 297 RACQVVCGENHTAVITEDGLLYTFGDGRHGKLGL 330



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 146/293 (49%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +ACG+ HT  +T +G L+ +G  + N G LG GSKV+   P  V   L    +  ++CG 
Sbjct: 41  IACGDEHTALITENGKLFMFG--SNNWGQLGLGSKVTVNKPTCVKA-LKSEKVQLVACGR 97

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T+ G ++  G  S G LG GD                RT+      + +   + 
Sbjct: 98  NHTLICTAKGKVYASGGNSEGQLGLGDCEE-------------RTSFKRLDFFDSQGPIK 144

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  GKLF WGD  +G++G G +     P+ V+  + + I  V+CG+  
Sbjct: 145 MLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVS--VGQPISWVSCGYYH 202

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+    +    VP  V   I E  V +VACG  H  AL 
Sbjct: 203 SALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKS-IKEP-VRQVACGGGHTVAL- 259

Query: 538 STSKVYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +   VYT+G G  GQLGHG    ++R  P LV+  K  +  +VVCG N TA+I
Sbjct: 260 AEGNVYTFGLGQFGQLGHGTFIFESR-VPRLVEHFKKGRACQVVCGENHTAVI 311



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY 531
           ++ACG + +  +T +G ++  GS  +GQLG+     +  PT V    +E  V+ VACG  
Sbjct: 40  RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEK-VQLVACGRN 98

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK-QVKRVVCGLNFTAIICL 590
           H    T+  KVY  G  + GQLG GD + R S   +DF   +  +K +  G N +A + +
Sbjct: 99  HTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTV 158



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           +  SG V+T G + +       AD  +P++    +       +ACG  H A +T   K++
Sbjct: 9   IPESGAVFTFGKSKF-------ADN-IPSKF--WLKNDIPLRIACGDEHTALITENGKLF 58

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            +G    GQLG G K   N PT V  LK ++V+ V CG N T +IC  K
Sbjct: 59  MFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT-LICTAK 106



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           S+   V   + G  H    + G+V+ +G G   G LG G     + F    ++ +P+ VE
Sbjct: 241 SIKEPVRQVACGGGHTVALAEGNVYTFGLG-QFGQLGHGT----FIF----ESRVPRLVE 291

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQLIEILSGVN 297
                    + CG  H  ++T+ G ++++G+   G+LG G E   +   P L       N
Sbjct: 292 HFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYN 351

Query: 298 VELVACGEYHTCAVTR 313
           V+   CG  H   + R
Sbjct: 352 VQGAMCGGCHMVVLAR 367


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 165/361 (45%), Gaps = 43/361 (11%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L P+  +  +   V ++ CG RH V V   G +++ G    G+LGH  E     P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV 79

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRK-----VS 345
            L   N+  V+CGE HT A+   G +Y WG D     GLLG  S+    +PRK     V 
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRKSIFMPVD 137

Query: 346 GNL-------DGIHLSYISCGLWHTA----------VVTSAGHLFTFGDGSFGALGHG-D 387
            N+            S++S      A          V  SA  +F +G   +G LG G D
Sbjct: 138 KNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGID 197

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
               + P+ +++L G+   +V+ G  H+  + ++              G +F WG    G
Sbjct: 198 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS--------------GAIFGWGRNKFG 243

Query: 448 RLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD 507
           +LG  D+  R  P  +  L  + I  + CG D + ALT  G V+T G+  YGQLG     
Sbjct: 244 QLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 303

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTL 566
             +  R   E+  S V ++ACG  H +A   +S ++Y++G G NGQLG G   NR SP  
Sbjct: 304 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 363

Query: 567 V 567
           V
Sbjct: 364 V 364



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 151/338 (44%), Gaps = 24/338 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  +      V  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGS 379
              + G LGH  + S   P +V   LD  ++  +SCG  HT  +   G ++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRV-SCGVWHTAAVVVATDSSSSSPSG------- 431
            G LG  + I   +PR+   +   +  R+  C    +    V+T  S  +P         
Sbjct: 116 LGLLGSEECIR--VPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQ 173

Query: 432 -STSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
            + S  ++F WG    G+LG G D + +  P+ +  L+     QVA G   S  LT SG 
Sbjct: 174 VAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 233

Query: 490 VYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           ++  G   +GQLG+    D  VP  +    ++  V  + CG  H AALT    V+T+G G
Sbjct: 234 IFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAG 292

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             GQLGH    +  +P  V  L    V ++ CG   T+
Sbjct: 293 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 330



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 16/205 (7%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S  +VF WG+   N +   G+  +G    +QT    P+ ++S + +    +A G  H+ +
Sbjct: 177 SASEVFCWGQ---NKY---GQLGLGIDCKKQTS---PQLIKSLLGIPFMQVAAGGAHSFV 227

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T  G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++
Sbjct: 228 LTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVF 287

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGD 377
           T+G G Y  G LGH S      PRKV   L G  ++ I+CG  HT A V S+G +++FG 
Sbjct: 288 TFGAGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 344

Query: 378 GSFGALGHGDHISTSIPREVETLRG 402
           G  G LG G   STS  +   T++G
Sbjct: 345 GGNGQLGTG---STSNRKSPFTVKG 366



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 124/302 (41%), Gaps = 52/302 (17%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ ++    LG   +     PRK S       +  + CGL HT  V   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P +V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL--------------NDKG 103

Query: 437 KLFTWG---DGDKGRLGHGD--KEPRLFPECVAPLIDENICQVACGHDLS---------- 481
           +++ WG   DG  G LG  +  + PR   + +   +D+NI    C    S          
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR---KSIFMPVDKNIRIKECKKTASRKSWVSTLCS 160

Query: 482 -------------VALTTSGHVYTMGSAAYGQLGVPV--ADGLVPTRVDGEIAESFVEEV 526
                        VA++ S  V+  G   YGQLG+ +       P  +   +   F++ V
Sbjct: 161 ELAPDSHLAESGQVAVSAS-EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-V 218

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           A G  H   LT +  ++ WG+   GQLG  D+++R  P L+  L+ +++  + CG + TA
Sbjct: 219 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTA 278

Query: 587 II 588
            +
Sbjct: 279 AL 280


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 170/346 (49%), Gaps = 33/346 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + VH I+CG  H+  VT+QG +F +G+ + G+LG   +  V+ P  +++L G   + VAC
Sbjct: 35  IPVH-ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVAC 93

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT   T  G++   G  +     LGH +    +  +++    D   +  +S G   +
Sbjct: 94  GTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTS 151

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A +T  G LF +GD S G LG G+     +P+E+    G     VSCG  H+A V     
Sbjct: 152 AALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCGYRHSALV----- 204

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLS 481
                    T  G ++++G+   GRLG    +     +P+ V  L   ++ QVACG   +
Sbjct: 205 ---------TDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHT 253

Query: 482 VALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           +AL T   +Y  G   +GQLG    V VAD  V     G   +  V  V CG  H A +T
Sbjct: 254 LAL-TEDELYCFGGGEFGQLGLGTLVFVADSPVAV---GHFRKGRVTHVTCGEQHSALIT 309

Query: 538 STSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
            +  +YT+G G +G+LGHGD++  N+ +PT+     +  V  V CG
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACG 355



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 36/298 (12%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACG 304
             ++ACG  H ++ T QGEI + G  S G+LG G   D +S  +L        ++L++ G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           ++ + A+T  G L+ WGD +  +G LG G+     +P+++  N+ G  + ++SCG  H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNS--AGQLGFGNDSHALLPKEL--NM-GQSIHWVSCGYRHSA 202

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +VT +G +++FG+ + G LG   H   + S P+ VE+L  +   +V+CG  HT A+    
Sbjct: 203 LVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSV--LQVACGGKHTLALTE-- 258

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLIDENICQVACGH 478
                         +L+ +G G+ G+LG G     +F    P  V       +  V CG 
Sbjct: 259 -------------DELYCFGGGEFGQLGLGT---LVFVADSPVAVGHFRKGRVTHVTCGE 302

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG---VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
             S  +T SG +YT G   +G+LG       +   PT V     E  V  VACG+ H+
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPT-VCQRFFEYSVMTVACGSSHM 359



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 23/235 (9%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           ++S+  H SA    D  G +F+WG+  A G LG         F   + ALLPK  E  M 
Sbjct: 143 LLSAGDHTSAALTED--GRLFLWGDNSA-GQLG---------FGNDSHALLPK--ELNMG 188

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELV 301
             +H ++CG RH+ LVT  G+++S+GE + GRLG    + A+ S+PQ +E L   +V  V
Sbjct: 189 QSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLH--SVLQV 246

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           ACG  HT A+T   +LY +G G +  G LG G+ V         G+     +++++CG  
Sbjct: 247 ACGGKHTLALTED-ELYCFGGGEF--GQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQ 303

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWH 414
           H+A++T +G L+TFGDG  G LGHGD   T+   P   +         V+CG  H
Sbjct: 304 HSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 30/294 (10%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT  G L+ +GD   N G LG   K     P  V   L G     ++CG 
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDN--NRGQLGLQIKGPVTKPVCVKV-LKGERAQSVACGT 95

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V TS G +   G  S G LG G H + SI          +  R  C  +    ++ 
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSI--------SFQRLRPFCD-YAPIKLLS 145

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A D +S++    T  G+LF WGD   G+LG G+    L P+ +   + ++I  V+CG+  
Sbjct: 146 AGDHTSAA---LTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN--MGQSIHWVSCGYRH 200

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESF--VEEVACGAYHVAA 535
           S  +T SG VY+ G +A G+LG+    +A+   P RV     ES   V +VACG  H  A
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRV-----ESLHSVLQVACGGKHTLA 255

Query: 536 LTSTSKVYTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LT   ++Y +G G  GQLG G      +SP  V   +  +V  V CG   +A+I
Sbjct: 256 LTE-DELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALI 308



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 27/224 (12%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   G +FTFG            I+ ++P  +  L+      +SCG  H+A V       
Sbjct: 7   IPDTGAVFTFGKS---------KIANNVPSRL-WLKSDIPVHISCGQSHSAFV------- 49

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G+LF +GD ++G+LG   K P   P CV  L  E    VACG D ++  T
Sbjct: 50  -------TEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVST 102

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           + G +   G  + GQLG+    D +   R+      + ++ ++ G +  AALT   +++ 
Sbjct: 103 SQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFL 162

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           WG  + GQLG G+  +   P  ++    + +  V CG   +A++
Sbjct: 163 WGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCGYRHSALV 204


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 157/328 (47%), Gaps = 51/328 (15%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           PQ I  L   ++  V+CG  HT A+T SG +Y+WG G+   G LGHG       P+K++ 
Sbjct: 40  PQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSM--GQLGHGDLKIINEPQKIAF 97

Query: 347 -NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR---- 401
              + + + YISCG  H+A VT  G L+ +G+  +G LG        +P+E E       
Sbjct: 98  FEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLG--------LPKEYEAAHESLP 149

Query: 402 ----------GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
                     G    +VSCG  HTAA+              TS G+++ WG GD G+LG 
Sbjct: 150 VKCPMPEGEAGETIVKVSCGGTHTAAL--------------TSFGRVYVWGRGDSGQLGI 195

Query: 452 GD---KEPR-------LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    K+P          P  +     E + QVACG   S A+T  GHVY  G   YG L
Sbjct: 196 GSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGML 255

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           GV   +D  +P R++    +  V  V+CG +H   +  +   Y +G+G  G+LG GD  +
Sbjct: 256 GVGQSSDQQIPKRLE-YFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKS 314

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           R  P LV  LK K V +  CG + T  +
Sbjct: 315 RTRPHLVKALKGKTVIQAACGGSHTLFV 342



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 48/362 (13%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V+ WG G + G LG G+ ++        +     A      L+V  I+CG  H+  
Sbjct: 66  SSGAVYSWGWG-SMGQLGHGDLKI-------INEPQKIAFFEQERLEVDYISCGGCHSAA 117

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLI------EILSGVNVELVACGEYHTCAVT 312
           VTK G ++ WGE   G+LG  +E + +H  L       E  +G  +  V+CG  HT A+T
Sbjct: 118 VTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT 177

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL------------DGIHLSYISCGL 360
             G +Y WG G  +SG LG GS    W+    + +L            +G  +  ++CG 
Sbjct: 178 SFGRVYVWGRG--DSGQLGIGS---VWMKDPENESLMGASRPHLLKAFNGEKVVQVACGA 232

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
           +H+A VT  GH++ +G   +G LG G      IP+ +E    +   RVSCG WHT  VVV
Sbjct: 233 FHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHT--VVV 290

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A              G  + +G G+ GRLG GD + R  P  V  L  + + Q ACG   
Sbjct: 291 AKS------------GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSH 338

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTST 539
           ++ +T+ G  Y  G   +G+LG+     L VPTR+D  +    V + + G  H  AL  +
Sbjct: 339 TLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD--LGPIPVRQFSAGGAHSVALMHS 396

Query: 540 SK 541
           S+
Sbjct: 397 SR 398



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 167/361 (46%), Gaps = 49/361 (13%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            P+ + +    D+  ++CG+RH + +T  G ++SWG  S G+LGHG    ++ PQ I   
Sbjct: 39  FPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFF 98

Query: 294 SG--VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG--------HGS-KVSCWIPR 342
               + V+ ++CG  H+ AVT+ G LY WG+  +  G LG        H S  V C +P 
Sbjct: 99  EQERLEVDYISCGGCHSAAVTKDGTLYVWGESHW--GQLGLPKEYEAAHESLPVKCPMPE 156

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG----------DHISTS 392
             +G      +  +SCG  HTA +TS G ++ +G G  G LG G            +  S
Sbjct: 157 GEAGET----IVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGAS 212

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P  ++   G +  +V+CG +H+AAV              T  G ++ WG  D G LG G
Sbjct: 213 RPHLLKAFNGEKVVQVACGAFHSAAV--------------TEQGHVYVWGKEDYGMLGVG 258

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
               +  P+ +    D  + +V+CG   +V +  SG  Y  G   YG+LG+    G   +
Sbjct: 259 QSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGL----GDTKS 314

Query: 513 RVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
           R    + ++     V + ACG  H   +TS    Y  G+  +G+LG  D      PT +D
Sbjct: 315 RTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD 374

Query: 569 F 569
            
Sbjct: 375 L 375



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 35/268 (13%)

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
            P+++ GNL    +  +SCG  HT  +TS+G ++++G GS G LGHGD    + P+++  
Sbjct: 39  FPQQI-GNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAF 97

Query: 400 LRG--LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG----HGD 453
                L    +SCG  H+AAV              T  G L+ WG+   G+LG    +  
Sbjct: 98  FEQERLEVDYISCGGCHSAAV--------------TKDGTLYVWGESHWGQLGLPKEYEA 143

Query: 454 KEPRLFPECVAPLID--ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-------P 504
               L  +C  P  +  E I +V+CG   + ALT+ G VY  G    GQLG+       P
Sbjct: 144 AHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDP 203

Query: 505 VADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
             + L+    P  +     E  V+ VACGA+H AA+T    VY WGK   G LG G   +
Sbjct: 204 ENESLMGASRPHLLKAFNGEKVVQ-VACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSD 262

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +  P  +++  D  V RV CG   T ++
Sbjct: 263 QQIPKRLEYFDDIPVLRVSCGGWHTVVV 290



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 12/241 (4%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL----PKAV 238
           ++V  S  G+      S G V++WG G  +G LG G     +    + ++L+    P  +
Sbjct: 162 TIVKVSCGGTHTAALTSFGRVYVWGRG-DSGQLGIGSV---WMKDPENESLMGASRPHLL 217

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ++     V  +ACGA H+  VT+QG ++ WG+E  G LG G+ +D   P+ +E    + V
Sbjct: 218 KAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPV 277

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
             V+CG +HT  V +SGD Y +G G Y  G LG G   S   P  V   L G  +   +C
Sbjct: 278 LRVSCGGWHTVVVAKSGDCYAFGRGEY--GRLGLGDTKSRTRPHLVKA-LKGKTVIQAAC 334

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HT  VTS G  +  G    G LG  D  +  +P  ++ L  +   + S G  H+ A+
Sbjct: 335 GGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393

Query: 419 V 419
           +
Sbjct: 394 M 394


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 36/364 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG +H + + + G +++ G  S G+LGH +  +   P+L+  L    + +V+CG  H+
Sbjct: 38  VACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELVGALDTQKITMVSCGRAHS 95

Query: 309 CAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            AV   G ++ WG G  + G LG   ++ +  IPR +    D   +S + CG  H   ++
Sbjct: 96  VAVNEQGQVFVWGAG--DGGQLGLETAETAVRIPRLLKKLCDH-SISQVVCGNQHCIALS 152

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             G LFT+G  S G LG G   ++ + P  V++L G+   +++ G  H  A+ ++     
Sbjct: 153 RDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLS----- 207

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                    G +F WG    G+LG  DK+ R  P  +  L  + +  ++CG + + ALT 
Sbjct: 208 ---------GAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTK 258

Query: 487 SGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYT 544
           SG ++T G  + GQLG   ++  L+P RV  E+  + V ++ CG +H  A   +S  VY 
Sbjct: 259 SGGLFTFGDGSRGQLGHGSSNNELLPRRV-MELMGTEVSQITCGRHHTLAFVPSSGTVYA 317

Query: 545 WGKGANGQLGHGDKDNRNSPTLV--DFL-----KDKQVKRVVCG-LNFTAIICLHKWVSS 596
           +G  ++GQLG G   +  SP  V  DFL     K K   R+  G L +T I    K +  
Sbjct: 318 FGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVI----KIICG 373

Query: 597 VDHS 600
            DHS
Sbjct: 374 GDHS 377



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 182/411 (44%), Gaps = 54/411 (13%)

Query: 265 IFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG    G+LG G E + V  P++  + SG  ++ VACG  HT  + + G +YT G  
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +   G LGH    +   P  V G LD   ++ +SCG  H+  V   G +F +G G  G L
Sbjct: 61  S--CGQLGHDKAGNS--PELV-GALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQL 115

Query: 384 G-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G      +  IPR ++ L     ++V CG  H  A+              +  G+LFTWG
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIAL--------------SRDGQLFTWG 161

Query: 443 DGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
               G+LG G  E  +L P  V  L    + Q+  G D   AL+ SG V+  G    GQL
Sbjct: 162 QNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQL 221

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G+    D  VP  +    ++  V  ++CG  H AALT +  ++T+G G+ GQLGHG  +N
Sbjct: 222 GLNDKQDRAVPCHIKFLRSQRVV-YISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNN 280

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYN 620
              P  V  L   +V ++ CG + T               V SS                
Sbjct: 281 ELLPRRVMELMGTEVSQITCGRHHTLAF------------VPSS---------------- 312

Query: 621 CGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFT-KLKKTDTKLKRTSGY 670
            G V+   C+S   L   +   +  P+ V +D  T  L+K    L+  +G+
Sbjct: 313 -GTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGF 362



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 33/289 (11%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           NS +   A +T +I++ S       G AH    +  G VF+WG G       GG+  +G 
Sbjct: 72  NSPELVGALDTQKITMVSC------GRAHSVAVNEQGQVFVWGAG------DGGQ--LGL 117

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EAD 283
             + +T   +P+ ++      +  + CG +H + +++ G++F+WG+ S G+LG G+ E  
Sbjct: 118 E-TAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETS 176

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P  ++ L+G+ +  +  G  H  A++ SG ++ WG     +G LG   K    +P  
Sbjct: 177 KLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKN--KAGQLGLNDKQDRAVPCH 234

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           +   L    + YISCG  HTA +T +G LFTFGDGS G LGHG   +  +PR V  L G 
Sbjct: 235 IK-FLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGT 293

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
             ++++CG  HT A V              S G ++ +G    G+LG G
Sbjct: 294 EVSQITCGRHHTLAFV-------------PSSGTVYAFGCNSHGQLGTG 329


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 173/367 (47%), Gaps = 30/367 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           D+F WG   ++G LG G              L+P  +       +  IACG RH + +T 
Sbjct: 2   DLFCWGNA-SHGQLGMGG-------IEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTA 53

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G++++ G     +LGH        P LI  L    V  +ACG  H+ A+T  G + +WG
Sbjct: 54  NGKVYACGNNDQAQLGHN--LPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWG 111

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           D   + G LG  +  S     K+  +L   H+  I+CG  H+  +TS G L+++G   +G
Sbjct: 112 DN--DCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYG 169

Query: 382 ALGHGDHISTS---IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            LG       S    P  + TL G+    ++CG  H+  +     S SS+         +
Sbjct: 170 QLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLI-----SKSSA---------V 215

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F +G  + G+LG  D+  R +P  +  L    +  VACG + SV LT  G V+T G+  Y
Sbjct: 216 FGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTY 275

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGD 557
           GQLG       +  R+  E+  S + +VACG  H  AL  S  +VY +G G++GQLG+  
Sbjct: 276 GQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRS 335

Query: 558 KDNRNSP 564
            ++   P
Sbjct: 336 TNSVTLP 342



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           DL+ WG+ ++    +G        IP ++    D   L  I+CG  HT  +T+ G ++  
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDA-PLRQIACGHRHTLFLTANGKVYAC 60

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G+     LGH  ++ T  P  +  L+      ++CG  H+ A+              T  
Sbjct: 61  GNNDQAQLGH--NLPTKRPLLIPELQNYVVVAIACGSRHSMAL--------------TEW 104

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD D G+LG   D+     P+ +  L+ +++ Q+ACG++ S+ALT+ G +Y+ G
Sbjct: 105 GQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWG 164

Query: 495 SAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV     L     P R+   +    +  +ACG  H   ++ +S V+ +G+   
Sbjct: 165 SNIYGQLGVKPPQELSHCNYPLRLTTLLGIP-LATIACGGNHSFLISKSSAVFGFGRNNC 223

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 224 GQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 35/329 (10%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           ++F WG  S G+LG G   +  +  P  I       +  +ACG  HT  +T +G +Y  G
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           +   +   LGH   +K    IP      L    +  I+CG  H+  +T  G + ++GD  
Sbjct: 62  NN--DQAQLGHNLPTKRPLLIPE-----LQNYVVVAIACGSRHSMALTEWGQVLSWGDND 114

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG   D     +P+ + +L      +++CG  H+ A+              TSCG+L
Sbjct: 115 CGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLAL--------------TSCGEL 160

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG   K P+    C  PL     +   +  +ACG + S  ++ S  V+  
Sbjct: 161 YSWGSNIYGQLG--VKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGF 218

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+   ++   PT++   +    V  VACG      LT+   V+T G G  GQ
Sbjct: 219 GRNNCGQLGLNDESNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACG 306



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 45/323 (13%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           VV + + GS H       G V  WG+    G LG          + Q+   LPK + S +
Sbjct: 87  VVVAIACGSRHSMALTEWGQVLSWGDNDC-GQLGQS--------TDQSIIELPKIIRSLV 137

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH---PQLIEILSGVNVE 299
           +  V  IACG  H++ +T  GE++SWG    G+LG     ++SH   P  +  L G+ + 
Sbjct: 138 SKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLA 197

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG  H+  +++S  ++  G G  N G LG   + +   P ++   L  + + +++CG
Sbjct: 198 TIACGGNHSFLISKSSAVF--GFGRNNCGQLGLNDESNRAYPTQLK-TLRTLGVRFVACG 254

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              +  +T+ G +FT G G++G LGHG + +  +PR V  L G   T+V+CG  HT A+V
Sbjct: 255 DEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALV 314

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAP--------LIDEN 470
                         S G+++ +G G  G+LG+        P E + P        L+  N
Sbjct: 315 -------------PSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPWVSPSDSALLQSN 361

Query: 471 -------ICQVACGHDLSVALTT 486
                  I Q+  G D S+  TT
Sbjct: 362 DAKASVVIHQIFSGGDQSIVTTT 384


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 153/346 (44%), Gaps = 32/346 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG+              G +   Q  +  P+ ++  M   V ++ACG  H+ +V   
Sbjct: 1   VYFWGQ-------------AGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGS 47

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE+  WGE   G+ G G +    HP  +  L GV    V+CG  HT  V+  G +++WG 
Sbjct: 48  GEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGL 107

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G   +G LGHGS+ +   P  V   + G  +  ++CG+ HT +V + G L+T G    G 
Sbjct: 108 GA--NGQLGHGSRDNLTTPSVVQ-AMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQ 164

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
            G G       P+ VE+LRG      SCG  HTA V              T  G++FT+G
Sbjct: 165 CGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVV--------------TGGGEVFTFG 210

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
            G  G+LGHGD +    P  V  L+   +  VACG + +V       V+  G    GQLG
Sbjct: 211 SGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270

Query: 503 VPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
                   L   R    + E  VE   C    V ALT    +  WG
Sbjct: 271 ASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 24/330 (7%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++ WG+        G +   S P++++   G  V  VACG  H+  V  SG++  WG+  
Sbjct: 1   VYFWGQAGSAV---GEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENK 57

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
           Y  G  G G++     P  V G+L G+    +SCG  HT VV+  G +F++G G+ G LG
Sbjct: 58  Y--GQCGTGTQEQTEHPTFV-GSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG   + + P  V+ +RG     V+CGV HT  V+                G+L+T G  
Sbjct: 115 HGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAG--------------GELYTCGWN 160

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+ G G     L P+CV  L  E +   +CG   +  +T  G V+T GS + GQLG  
Sbjct: 161 KNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHG 220

Query: 505 VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN--RN 562
               L   R  G +    +  VACG  +        +V+ +G    GQLG     +   +
Sbjct: 221 DCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLS 280

Query: 563 SPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            P  ++FLK+++V+  +C  N + +I L +
Sbjct: 281 EPRQMEFLKEEEVE--LCKCNQSEVIALTR 308



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 31/280 (11%)

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           G +VS   PR +   + G  +  ++CGL H+A+V  +G +  +G+  +G  G G    T 
Sbjct: 12  GEQVSSSTPRMLKKAM-GRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTE 70

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P  V +L G+    VSCG  HT  VVV+ D            G++F+WG G  G+LGHG
Sbjct: 71  HPTFVGSLFGVACMSVSCGGAHT--VVVSED------------GRVFSWGLGANGQLGHG 116

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVP 511
            ++    P  V  +   ++  V CG   +V +   G +YT G    GQ GV   +D L P
Sbjct: 117 SRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSP 176

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             V+    E  V+  +CGA H A +T   +V+T+G G+ GQLGHGD  + + P  V  L 
Sbjct: 177 QCVESLRGEG-VQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALV 235

Query: 572 DKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGF 611
              +  V CG  +T  +C     ++ DH V       FGF
Sbjct: 236 GIVMSMVACGEEYT--VC-----AAFDHRV-------FGF 261


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 157/325 (48%), Gaps = 24/325 (7%)

Query: 265 IFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG    G+LG G E + V  P+   + SG  ++ V CG  H+  +   G +YT G  
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +   G LGH       I  +V G LD   ++ +SCG  H+  V   G LF +G G  G L
Sbjct: 61  S--CGQLGHDK---AGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115

Query: 384 GHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G G    +  IPR V+ L   R ++V CG  H  A+              +  G+LFTWG
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVAL--------------SRDGQLFTWG 161

Query: 443 DGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
               G+LG G  EP +LFP  +  L    + Q+  G D S AL+ SG V+  G    GQL
Sbjct: 162 QNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQL 221

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G+    D  VP  +    ++  V  ++CG  H AALT    ++T+G G+ GQLGHG  ++
Sbjct: 222 GLNDKQDRAVPCHIKFLRSQKVVY-ISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNS 280

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFT 585
              P  V  L   +V ++ CG + T
Sbjct: 281 ELLPRRVLELMGTEVSQIACGRHHT 305



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 166/320 (51%), Gaps = 24/320 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           + CG +H+V +   G +++ G  S G+LGH + A +S P+++  L    + +V+CG  H+
Sbjct: 38  VGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDK-AGIS-PEVVGALDTQKITMVSCGRGHS 95

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            AV   G L+ WG G  + G LG G+ + +  IPR V    D   +S + CG  H   ++
Sbjct: 96  MAVNEQGQLFAWGAG--DGGQLGLGTTETTVRIPRLVKRLCDH-RISQVMCGNQHCVALS 152

Query: 368 SAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             G LFT+G  + G LG G    S   P  +++L G+   +++ G  H+ A+ ++     
Sbjct: 153 RDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLS----- 207

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                    G +F WG    G+LG  DK+ R  P  +  L  + +  ++CG + + ALT 
Sbjct: 208 ---------GAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTK 258

Query: 487 SGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYT 544
            G ++T G  ++GQLG    +  L+P RV  E+  + V ++ACG +H  A   +S  VY 
Sbjct: 259 DGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTEVSQIACGRHHTLAFVPSSGVVYA 317

Query: 545 WGKGANGQLGHGDKDNRNSP 564
           +G  ++GQLG G   +  SP
Sbjct: 318 FGCNSHGQLGTGILGDARSP 337



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 142/271 (52%), Gaps = 20/271 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEIL 293
           P+ V +     +  ++CG  H++ V +QG++F+WG   GG+LG G  E  V  P+L++ L
Sbjct: 74  PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRL 133

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIH 352
               +  V CG  H  A++R G L+TWG  T  SG LG G  + S   P  +  +L GI 
Sbjct: 134 CDHRISQVMCGNQHCVALSRDGQLFTWGQNT--SGQLGLGKGEPSKLFPHPLK-SLAGIP 190

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           L+ I+ G  H+  ++ +G +F +G    G LG  D    ++P  ++ LR  +   +SCG 
Sbjct: 191 LAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGD 250

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            HTAA+              T  G LFT+GDG  G+LGHG     L P  V  L+   + 
Sbjct: 251 EHTAAL--------------TKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVS 296

Query: 473 QVACGHDLSVALT-TSGHVYTMGSAAYGQLG 502
           Q+ACG   ++A   +SG VY  G  ++GQLG
Sbjct: 297 QIACGRHHTLAFVPSSGVVYAFGCNSHGQLG 327



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 26/253 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG G       GG+  +G   + +T   +P+ V+      +  + CG +H V ++
Sbjct: 102 GQLFAWGAG------DGGQLGLG---TTETTVRIPRLVKRLCDHRISQVMCGNQHCVALS 152

Query: 261 KQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G++F+WG+ + G+LG G+ E     P  ++ L+G+ +  +  G  H+ A++ SG ++ 
Sbjct: 153 RDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFG 212

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG     +G LG   K    +P  +   L    + YISCG  HTA +T  G LFTFGDGS
Sbjct: 213 WGKN--RAGQLGLNDKQDRAVPCHIK-FLRSQKVVYISCGDEHTAALTKDGGLFTFGDGS 269

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LGHG   S  +PR V  L G   ++++CG  HT A V              S G ++
Sbjct: 270 WGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFV-------------PSSGVVY 316

Query: 440 TWGDGDKGRLGHG 452
            +G    G+LG G
Sbjct: 317 AFGCNSHGQLGTG 329



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 127/278 (45%), Gaps = 28/278 (10%)

Query: 317 LYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +  WG+     G LG G  K   + PR       G  L  + CG  H+  +   G ++T 
Sbjct: 1   MLCWGNA--KDGQLGIGVEKNPVFEPRNCH-VFSGRGLKEVGCGGQHSVFLMHDGSVYTC 57

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G  S G LGH D    S P  V  L   + T VSCG  H+ AV                 
Sbjct: 58  GSNSCGQLGH-DKAGIS-PEVVGALDTQKITMVSCGRGHSMAV--------------NEQ 101

Query: 436 GKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF WG GD G+LG G  E  +  P  V  L D  I QV CG+   VAL+  G ++T G
Sbjct: 102 GQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWG 161

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGAN 550
               GQLG+   +   P+++     +S     + ++  G  H  AL+ +  V+ WGK   
Sbjct: 162 QNTSGQLGLGKGE---PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRA 218

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  DK +R  P  + FL+ ++V  + CG   TA +
Sbjct: 219 GQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAAL 256


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 188/369 (50%), Gaps = 33/369 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V   ACG RH++L+   G + S G+ + G+LG   +     P LI+ L  + V LV+CG
Sbjct: 22  EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           + H+ AV   G ++ WG G+   G LG    K   + P+K+   L GI +  +SCG +H+
Sbjct: 82  KEHSLAVCHKGRVFAWGAGS--EGQLGIEECKEKIFTPKKIK-TLTGIKIIQVSCGHYHS 138

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             ++  G ++++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+    
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 194

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHD 479
                S SG++     F WG  + G+L   G+  P  R  P  +  L   ++  ++CG++
Sbjct: 195 -----SLSGTS-----FGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYE 244

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALT 537
            +  LT +G V+T G  + GQLG  P A    P +V+G   +  V ++ CG+YH +A + 
Sbjct: 245 HTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVY 302

Query: 538 STSKVYTWGKGAN----GQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCGLNFTAIICLH 591
           +T +V ++G+G N            +N +   L+  + L D QVK +  G  +  ++  +
Sbjct: 303 TTGEVVSFGRGRNCASSPTHSEAQMENFDMSCLISANDLVDVQVKHIFAG-TYVNVVTTY 361

Query: 592 KWVSSVDHS 600
           +  SS + S
Sbjct: 362 QETSSTNVS 370



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 18/252 (7%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG  E +           
Sbjct: 69  ALETLLVGLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIEECK--------EKI 114

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             PK +++   + +  ++CG  H++ +++ G+++SWG+ S G+LG G+E    + PQ + 
Sbjct: 115 FTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVR 174

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
            L G+ +  VA G  H+ A++ SG  + WG + T    L G+ + V  + P  + G L  
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSI-GALKS 233

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + + YISCG  HTAV+T  G +FTFGD S G LG+        P++VE + GL  +++ C
Sbjct: 234 LDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGL-VSQIDC 292

Query: 411 GVWHTAAVVVAT 422
           G +HT A V  T
Sbjct: 293 GSYHTLAYVYTT 304



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 24/266 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEIL 293
           P  +++   L V  ++CG  H++ V  +G +F+WG  S G+LG    +  +  P+ I+ L
Sbjct: 64  PGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL 123

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  V+CG YH+ A++  G +Y+WG  +   G LG G +       +   +L+GI L
Sbjct: 124 TGIKIIQVSCGHYHSLALSEDGQVYSWGKNS--QGQLGLGKEFPSQASPQRVRSLEGIPL 181

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  + G L   G+   +    P  +  L+ L    +SC
Sbjct: 182 AQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISC 241

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID  
Sbjct: 242 GYEHTAVL--------------TQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG-IDGL 286

Query: 471 ICQVACG--HDLSVALTTSGHVYTMG 494
           + Q+ CG  H L+   TT G V + G
Sbjct: 287 VSQIDCGSYHTLAYVYTT-GEVVSFG 311



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 141/293 (48%), Gaps = 25/293 (8%)

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G  V   ACGE H+  +   G +++ GD T   G LG   K     P  +   L+ + + 
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNT--QGQLGRRGKPREERPGLIKA-LETLLVG 76

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVW 413
            +SCG  H+  V   G +F +G GS G LG  +       P++++TL G++  +VSCG +
Sbjct: 77  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHY 136

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENIC 472
           H+ A+              +  G++++WG   +G+LG G + P +  P+ V  L    + 
Sbjct: 137 HSLAL--------------SEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLA 182

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVAC 528
           QVA G   S AL+ SG  +  GS   GQL +   +  V    P  + G +    V  ++C
Sbjct: 183 QVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSI-GALKSLDVIYISC 241

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G  H A LT   KV+T+G  + GQLG+     +  P  V+ + D  V ++ CG
Sbjct: 242 GYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGI-DGLVSQIDCG 293



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 26/281 (9%)

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
           R+V     G  +   +CG  H+ ++ S G + + GD + G LG         P  ++ L 
Sbjct: 12  RRVPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALE 71

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-P 460
            L    VSCG  H+ AV                 G++F WG G +G+LG  + + ++F P
Sbjct: 72  TLLVGLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGIEECKEKIFTP 117

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
           + +  L    I QV+CGH  S+AL+  G VY+ G  + GQLG+       P++   +   
Sbjct: 118 KKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKE---FPSQASPQRVR 174

Query: 521 SF----VEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDK 573
           S     + +VA G  H  AL+ +   + WG    GQL   G+     R  P  +  LK  
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSL 234

Query: 574 QVKRVVCGLNFTAIICLHKWVSSVDHSVCSSC-HNPFGFRR 613
            V  + CG   TA++  +  V +   + C    +NP   +R
Sbjct: 235 DVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKR 275



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +  +LDV  I+CG  H  ++T+ G++F++G+ S G+LG+   A    PQ +E + 
Sbjct: 225 PHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGID 284

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDG 323
           G+ V  + CG YHT A V  +G++ ++G G
Sbjct: 285 GL-VSQIDCGSYHTLAYVYTTGEVVSFGRG 313


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 58/405 (14%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG--- 277
           + G S     D   P+ ++S  +  V  +ACG+ H++ +T+ G IF+WG+ S G+LG   
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGA 178

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
            GR     HPQ +  L GV +  +ACG +H+ A++ SG ++ WG    N G LG G+   
Sbjct: 179 PGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKN--NCGQLGLGTTED 236

Query: 338 CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
              P  +  NL    + YI+CG  +TA++T++G LF FG GS G LGHG H +   PR V
Sbjct: 237 RVSPTPLK-NLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSV 295

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           +   G   T+V+CG  HT  +            G T  G+ F+ G G KG+LG  +   +
Sbjct: 296 QGFLGSEITQVACGRQHTLVL-----------EGRT--GRFFSLGQGSKGQLGLDNDSSK 342

Query: 458 LFPECVAPLI-----------------------------DENICQVACGHDLSVALTTSG 488
               C +P+                              D++ C V+ G+D    L    
Sbjct: 343 ---SCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFRE 399

Query: 489 HVYTMGSAAYGQ-LGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            + ++      + L   V++    L P++   +  E  +   AC          +  ++ 
Sbjct: 400 AIPSIEPVVLTKDLLQEVSESSPLLEPSKAV-QTLEMALSSPACLNASFLVGAGSGGLFL 458

Query: 545 WGKGANGQLGHGDKDNRNSPTLV-DFLKDKQVKRVVCGLNFTAII 588
           +G+G+ GQLGHG   N  +P  V DFL + ++ +V CG   T ++
Sbjct: 459 FGQGSEGQLGHGSHSNEVNPRSVKDFLGN-EITQVACGRQHTLVL 502



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 161/340 (47%), Gaps = 36/340 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEIL 293
           P+ V +     +  I+CG RH  ++ + G +   G    G+LG  R  ++++H    E L
Sbjct: 29  PREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQDRPGSELAHVPATETL 88

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               +  V+CG  HT AVT  G +  WG        L  G       PR +  +L    +
Sbjct: 89  V---ITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLK-SLSSCQV 144

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG--------DHISTSIPREVETLRGLRT 405
           + ++CG  H+  +T  G +F +GD SFG LG G        DH     P+++ +L G+  
Sbjct: 145 AQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDH-----PQQLSSLPGVPI 199

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
            R++CG WH+ A+ V+              G +F WG  + G+LG G  E R+ P  +  
Sbjct: 200 RRLACGGWHSFALSVS--------------GAVFGWGKNNCGQLGLGTTEDRVSPTPLKN 245

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVE 524
           L  + +  +ACG + +  LT SG ++  G  + GQLG       V P  V G +  S + 
Sbjct: 246 LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLG-SEIT 304

Query: 525 EVACGAYHVAALTS-TSKVYTWGKGANGQLGHGDKDNRNS 563
           +VACG  H   L   T + ++ G+G+ GQLG  D D+  S
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGL-DNDSSKS 343



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 159/336 (47%), Gaps = 34/336 (10%)

Query: 265 IFSWGEESGGRLGHGREAD----VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           +FSWG    G+LG     D    +S P+ +  L+G  +  ++CG  HTC + R G +   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 321 GDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           G    + G LG    GS+++  +P       + + ++ +SCG  HT  VT  G +  +G 
Sbjct: 63  G--ANDRGQLGQDRPGSELA-HVPAT-----ETLVITQVSCGNDHTLAVTDRGQVLGWGR 114

Query: 378 GSFG--ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
              G   L  GD      PR +++L   +  +V+CG  H+ A+              T  
Sbjct: 115 NDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMAL--------------TRD 160

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLF---PECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           G++F WGD   G+LG G     L+   P+ ++ L    I ++ACG   S AL+ SG V+ 
Sbjct: 161 GRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFG 220

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G    GQLG+   +  V       +    V+ +ACG  + A LT++  ++ +G+G+ GQ
Sbjct: 221 WGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQ 280

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LGHG   N  +P  V      ++ +V CG   T ++
Sbjct: 281 LGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 162/399 (40%), Gaps = 83/399 (20%)

Query: 177 FRISLSSV-VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           F  SLSS  V+  + GS H       G +F WG+   N F   G    G +  R      
Sbjct: 135 FLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGD---NSFGQLGIGAPGRTLYRDH---- 187

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ + S   + +  +ACG  H+  ++  G +F WG+ + G+LG G   D   P  ++ L 
Sbjct: 188 PQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLK 247

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V+ +ACG+ +T  +T SG L+ +G G+   G LGHGS  +   PR V G L G  ++
Sbjct: 248 TKQVKYIACGQNYTAILTASGGLFLFGQGS--EGQLGHGSHSNEVNPRSVQGFL-GSEIT 304

Query: 355 YISC-----------------------------------------GLWHTAVVTSA---- 369
            ++C                                         G W     T      
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 370 -------GHLFTFGDGSFGALGHG---DH------ISTSIPREVETLRGLRTTRVSCGVW 413
                  G +F  GD SF  +  G   DH         SI   V T   L+    S  + 
Sbjct: 365 EESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLL 424

Query: 414 HTAAVVVATDSSSSSPS--------GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             +  V   + + SSP+        G+ S G LF +G G +G+LGHG     + P  V  
Sbjct: 425 EPSKAVQTLEMALSSPACLNASFLVGAGS-GGLFLFGQGSEGQLGHGSHSNEVNPRSVKD 483

Query: 466 LIDENICQVACGHDLSVALT-TSGHVYTMGSAAYGQLGV 503
            +   I QVACG   ++ L   +G  Y++G  + GQLG+
Sbjct: 484 FLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGL 522



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
           S  +  L P     T+ + + + AC     ++    G +F +G+ S G+LGHG  ++  +
Sbjct: 418 SESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVN 477

Query: 287 PQLIEILSGVNVELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSC 338
           P+ ++   G  +  VACG  HT  +  R+G  Y+ G G+     L +GS  SC
Sbjct: 478 PRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSC 530


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 172/374 (45%), Gaps = 62/374 (16%)

Query: 246  VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP-------QLIE--ILSGV 296
            V  IACG RH  L+T    ++++G    GRLGHG + D + P        LIE   +   
Sbjct: 1745 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVG 1804

Query: 297  NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
             V  V+CG  HT AVT SGDL+ +G G   +G LG G   S   P +V+   D  +++ +
Sbjct: 1805 GVVEVSCGREHTMAVTASGDLFGFGWG--EAGRLGTGETGSSLYPTRVT---DLQNIAAV 1859

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            +CG  HT  +T  G +F FG G  G LG+G      +P  V+ L   R   +  G  H+ 
Sbjct: 1860 ACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSC 1919

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLI------DE 469
            A+              ++ G + TWG G  G LGHGD++  L P  +  P        +E
Sbjct: 1920 AL--------------STEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEE 1965

Query: 470  N-------ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-----PVADGLVPTRVDGE 517
            N       +  +ACG   ++A T+ G +Y  G AA GQL V     P    L P R+   
Sbjct: 1966 NQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVP 2025

Query: 518  IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
               S +  VACG +  A  T+   ++ WG  A G           +P  VD   D +VKR
Sbjct: 2026 -TNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGN---------GAPLEVD---DARVKR 2072

Query: 578  V-VCG-LNFTAIIC 589
            + V G   F+ + C
Sbjct: 2073 IGVLGEFEFSQVAC 2086



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 250  ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
            +CG  H + VT  G++F +G    GRLG G      +P  +  L   N+  VACG  HT 
Sbjct: 1810 SCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQ--NIAAVACGREHTL 1867

Query: 310  AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            A+TR G ++ +G G    G LG+GS+    +P  V G L+   ++ I  G  H+  +++ 
Sbjct: 1868 ALTRKGRVFAFGAGF--GGRLGNGSETDEELPFAVQG-LEDYRIAAIDAGECHSCALSTE 1924

Query: 370  GHLFTFGDGSFGALGHGDHISTSIPREVE------TLRGLR--------TTRVSCGVWHT 415
            G + T+G GS GALGHGD  +   PR +E       + G           + ++CG +HT
Sbjct: 1925 GDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT 1984

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG----HGDKEPRLFPECVAPLIDENI 471
             A              +TS G L+ WGD   G+L        +   L P+ +    +  I
Sbjct: 1985 LA--------------ATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGI 2030

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
              VACG   S   T  GH++  GS A G  G P+       +  G + E    +VACGAY
Sbjct: 2031 RSVACGTFTSAVCTNQGHLFLWGSPAAGN-GAPLEVDDARVKRIGVLGEFEFSQVACGAY 2089

Query: 532  HVAALT 537
            H  A+T
Sbjct: 2090 HAVAIT 2095



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 143/323 (44%), Gaps = 55/323 (17%)

Query: 301  VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI---- 356
            +ACG  HT  +T    LYT+G G    G LGHG++  C  P  V     G   S I    
Sbjct: 1748 IACGYRHTALITDDRHLYTFGHG--ECGRLGHGNQEDCTEPVSV-----GYFTSLIEAEG 1800

Query: 357  ---------SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
                     SCG  HT  VT++G LF FG G  G LG G+  S+  P  V  L+ +    
Sbjct: 1801 VDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAA-- 1858

Query: 408  VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            V+CG  HT A+              T  G++F +G G  GRLG+G +     P  V  L 
Sbjct: 1859 VACGREHTLAL--------------TRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLE 1904

Query: 468  DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTR---------VDGE 517
            D  I  +  G   S AL+T G V T G  + G LG    D  L P R         +DGE
Sbjct: 1905 DYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGE 1964

Query: 518  IAE----SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG----HGDKDNRNSPTLVDF 569
              +    S V  +ACG+YH  A TS   +Y WG  A GQL        +    +P  +  
Sbjct: 1965 ENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRV 2024

Query: 570  LKDKQVKRVVCGLNFTAIICLHK 592
              +  ++ V CG  FT+ +C ++
Sbjct: 2025 PTNSGIRSVACG-TFTSAVCTNQ 2046



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 56/307 (18%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            GD+F +G G A G LG GE       +R TD             ++  +ACG  H + +T
Sbjct: 1823 GDLFGFGWGEA-GRLGTGETGSSLYPTRVTDLQ-----------NIAAVACGREHTLALT 1870

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            ++G +F++G   GGRLG+G E D   P  ++ L    +  +  GE H+CA++  GD+ TW
Sbjct: 1871 RKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTW 1930

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSG-----NLDGIH--------LSYISCGLWHTAVVT 367
            G G+  SG LGHG + +C  PR++ G      +DG          +S I+CG +HT   T
Sbjct: 1931 GFGS--SGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAAT 1988

Query: 368  SAGHLFTFGDGSFGALG----HGDHISTSIPR--EVETLRGLRTTRVSCGVWHTAAVVVA 421
            S G L+ +GD + G L         +    P+   V T  G+R+  V+CG + +A     
Sbjct: 1989 SDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRS--VACGTFTSAVC--- 2043

Query: 422  TDSSSSSPSGSTSCGKLFTWGD---GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                       T+ G LF WG    G+   L   D   +     +  L +    QVACG 
Sbjct: 2044 -----------TNQGHLFLWGSPAAGNGAPLEVDDARVKR----IGVLGEFEFSQVACGA 2088

Query: 479  DLSVALT 485
              +VA+T
Sbjct: 2089 YHAVAIT 2095



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 175  ETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
            E  + S +SVVS+ + GS H     S G ++ WG+  A      G+  V Y  + +   L
Sbjct: 1964 EENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAA------GQLSVEYITAPEMVVL 2017

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
             P+ +       + ++ACG   + + T QG +F WG  + G  G   E D +  + I +L
Sbjct: 2018 TPQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGN-GAPLEVDDARVKRIGVL 2076

Query: 294  SGVNVELVACGEYHTCAVTR 313
                   VACG YH  A+TR
Sbjct: 2077 GEFEFSQVACGAYHAVAITR 2096



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 12/100 (12%)

Query: 477  GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF------VEEVACGA 530
            G  L ++L    H+   G +A   L  P A+   P R+      SF      V ++ACG 
Sbjct: 1699 GKPLGLSLDEEAHISQGGRSATLCLR-PTAENASPIRM-----ASFPRPLRRVVQIACGY 1752

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             H A +T    +YT+G G  G+LGHG++++   P  V + 
Sbjct: 1753 RHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYF 1792


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 174/364 (47%), Gaps = 30/364 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK- 261
           V  WG G  +G LG G+           D   P+AV S +     ++ CGA +++ V   
Sbjct: 31  VLSWGRG-EDGQLGHGDAE---------DRQEPQAVFSLLHRGATSVHCGAEYSMAVAGG 80

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
             +++SWG    GRLG G   DV  P  +  L+G  V  VACG+ HT   T  G L+ +G
Sbjct: 81  DKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFG 140

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
                +G  G GS   C  P+ V+  L G  +  ++CG  H+  VTS G ++ +G G +G
Sbjct: 141 --RNQNGQCGLGSIQDCLEPQLVTA-LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYG 197

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            +G G+     +P   + L G++  +V+CG  H+ AV                 G ++TW
Sbjct: 198 NIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV--------------DEGGAMYTW 243

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G G   +L  GD++    P+ V  +  + +  VA G   ++A  + G ++  G   +GQ 
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMAADSQGRLFASGWNKFGQC 301

Query: 502 GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
           GV   + +V  +    +A   V +V  G  H  A+T T K ++WG+  NGQLGH    + 
Sbjct: 302 GVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDS 361

Query: 562 NSPT 565
           NSP 
Sbjct: 362 NSPV 365



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 133/290 (45%), Gaps = 25/290 (8%)

Query: 301 VACGEYHTCAV--TRSGDL-YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           +ACG  H+ A+  T SG +  +WG G    G LGHG       P+ V   L     S + 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRG--EDGQLGHGDAEDRQEPQAVFSLLHRGATS-VH 68

Query: 358 CGL-WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           CG  +  AV      ++++G G FG LG GD     IP  +  L G R   V+CG  HT 
Sbjct: 69  CGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
                          +T+ G+LF +G    G+ G G  +  L P+ V  L  + +  VAC
Sbjct: 129 V--------------ATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVAC 174

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           G + S+ +T+ G VY  G   YG +G   + D  +PT   G +    V +V CG  H  A
Sbjct: 175 GAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKG-LEGVKVAQVNCGWRHSIA 233

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +     +YTWG GA  QL  GD+ +   P  V+ +  +QV  V  G   T
Sbjct: 234 VDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHT 281



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 356 ISCGLWHTAVVTS---AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++CG  H+  + S      + ++G G  G LGHGD      P+ V +L     T V CG 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            ++ AV                  ++++WG GD GRLG GD +    P  +  L    + 
Sbjct: 72  EYSMAVAGGDK-------------QVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVA 118

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAY 531
            VACG   ++  T  G ++  G    GQ G+  + D L P  V     +  V  VACGA 
Sbjct: 119 SVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVA-VACGAE 177

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H   +TS  +VY WG G  G +G G+  +R+ PTL   L+  +V +V CG   +  +
Sbjct: 178 HSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV 234



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 468 DENICQVACG--HDLSVALTTSG-HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVE 524
           +  +  +ACG  H L++  T SG  V + G    GQLG   A+     +    +      
Sbjct: 6   EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGAT 65

Query: 525 EVACGA-YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            V CGA Y +A      +VY+WG G  G+LG GD  +   P  +  L  ++V  V CG  
Sbjct: 66  SVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDT 125

Query: 584 FTAI 587
            T +
Sbjct: 126 HTLV 129



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 168 NDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSF 226
            DR       R+     V++ + G  H    DS G +F      A+G+   G+  VG++ 
Sbjct: 254 GDRKDHYVPKRVEAVQQVATVAGGWRHTMAADSQGRLF------ASGWNKFGQCGVGHN- 306

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
               D +  + VE+     V  +  G +H + VT  G+ FSWG    G+LGH    D + 
Sbjct: 307 ---EDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNS 363

Query: 287 PQLIEILS--GVNVE 299
           P  +  LS  G+N +
Sbjct: 364 PVELAALSRGGINTD 378


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 195/412 (47%), Gaps = 41/412 (9%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V++WG   ++    G   ++          L PK  +     D   I  G      V+  
Sbjct: 372 VYVWGSNSSHQLAEGTLEKI----------LQPKLAQGFS--DAQMIEAGQYCTFSVSAD 419

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLYT 319
           G + + G+ S GRLG G   + S P+ + +     +  V+     + HT AVT  G++++
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFS 479

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+  +   P+ + G L G  +  +S G  H+A VT+ G L+T+G+G 
Sbjct: 480 WGDGDY--GKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGD 537

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL- 438
           FG LGH D  S ++P  V+ + G+   +V+CG  HT  + VA D            G++ 
Sbjct: 538 FGRLGHSDSHSRNVPTLVKDISGV--GQVACGSSHT--IAVAQD------------GRIV 581

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  L    I +V  G   S+ALT++G V+  G  + 
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC 641

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
              G      L P R+  E++ + + +++CG  H  AL+  ++V+ WG  A GQ G G  
Sbjct: 642 LGCGSSETTSLRP-RLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHT 700

Query: 559 DNR-NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPF 609
                 P  V  L+   ++++  G + +       W +        + H PF
Sbjct: 701 STPVTKPKKVIGLEGVSIQQITAGTSHSL-----AWTAVPTDRQLVAWHRPF 747



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 46/295 (15%)

Query: 316  DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            ++Y WG+G +   L   G+  S  +P  ++ +L       + CG   T +V + G +   
Sbjct: 3861 EVYLWGNGRHGQ-LADAGTSAS--VP-TLAPSLS--QTQQVVCGQNCTFLVQANGTVLAV 3914

Query: 376  GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G+GS+G LG G+      P  +  L+G   T++           V +  S       T  
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQL-----------VTSYGSDGHSLALTET 3963

Query: 436  GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            G++F+WGDGD G+LGHG+ E +  P+ +  L  E + Q+ACG   S  +T  G ++T GS
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGS 4023

Query: 496  AAYGQLGV-PVADGLVPTRV---DGE-------------------------IAESFVEEV 526
               G+LG    ++ ++P RV   DG                          +   F+E++
Sbjct: 4024 GDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDI 4083

Query: 527  ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A G  H+ AL++T  VY WG     QLG G  +    P LV  L+ K ++++  G
Sbjct: 4084 AVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQISAG 4138



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 149/345 (43%), Gaps = 66/345 (19%)

Query: 195  EDFDSLG--DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
            ED+   G  +V++WG G           R G      T A +P    S        + CG
Sbjct: 3852 EDWQQGGKSEVYLWGNG-----------RHGQLADAGTSASVPTLAPSLS--QTQQVVCG 3898

Query: 253  ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELVAC--GEYHTC 309
                 LV   G + + GE S GRLG G   D+  P +I  L G V  +LV     + H+ 
Sbjct: 3899 QNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSL 3958

Query: 310  AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            A+T +G++++WGDG Y  G LGHG+      P+++ G L G  +  ++CG  H+AVVT+ 
Sbjct: 3959 ALTETGEVFSWGDGDY--GKLGHGNSERQRRPKQIEG-LQGEEVVQLACGFKHSAVVTAD 4015

Query: 370  GHLFTFGDGSFGALGH----------------GDHISTSI-------------PREVETL 400
            G LFTFG G  G LG                 G HI   +             P+ +  L
Sbjct: 4016 GKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPAL 4075

Query: 401  RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
             G+    ++ G  H  A+              ++ G ++ WG   + +LG G   P   P
Sbjct: 4076 EGVFIEDIAVGCEHILAL--------------SNTGDVYAWGCNCEAQLGLGHSNPVKEP 4121

Query: 461  ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG-QLGVP 504
              V  L  +NI Q++ G   S A TT   + T  S   G QLG+P
Sbjct: 4122 ILVTTLQGKNIRQISAGRCHSSAWTTPA-LSTRASGCSGIQLGLP 4165



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 14/159 (8%)

Query: 437  KLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            +++ WG+G  G+L   G     P L P            QV CG + +  +  +G V  +
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSL------SQTQQVVCGQNCTFLVQANGTVLAV 3914

Query: 494  GSAAYGQLGVPVADGL-VPTRV---DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            G  +YG+LG   +D L  PT +    G +    V        H  ALT T +V++WG G 
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDG-HSLALTETGEVFSWGDGD 3973

Query: 550  NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             G+LGHG+ + +  P  ++ L+ ++V ++ CG   +A++
Sbjct: 3974 YGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVV 4012



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 26/217 (11%)

Query: 372  LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            ++ +G+G  G L      S S+P    +L   +T +V CG       +V  +        
Sbjct: 3862 VYLWGNGRHGQLADAG-TSASVPTLAPSLS--QTQQVVCG--QNCTFLVQAN-------- 3908

Query: 432  STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC-----GHDLSVALTT 486
                G +   G+G  GRLG G+ +    P  ++ L    + Q+       GH  S+ALT 
Sbjct: 3909 ----GTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGH--SLALTE 3962

Query: 487  SGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            +G V++ G   YG+LG   ++    P +++G   E  V+ +ACG  H A +T+  K++T+
Sbjct: 3963 TGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQ-LACGFKHSAVVTADGKLFTF 4021

Query: 546  GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
            G G +G+LG     N+  P  V  L    + + + GL
Sbjct: 4022 GSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGL 4058



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 48/231 (20%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+VF WG+G   G LG G         RQ     PK +E     +V  +ACG +H+ +VT
Sbjct: 3964 GEVFSWGDG-DYGKLGHGNSE------RQRR---PKQIEGLQGEEVVQLACGFKHSAVVT 4013

Query: 261  KQGEIFSWGEESGGRLGHGREADV-----------------------------SHPQLIE 291
              G++F++G    GRLG    ++                              + PQ+I 
Sbjct: 4014 ADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIP 4073

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             L GV +E +A G  H  A++ +GD+Y WG        LGH + V   I   +   L G 
Sbjct: 4074 ALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPI---LVTTLQGK 4130

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFG-ALGHGDHISTSIPREVETLR 401
            ++  IS G  H++  T+   L T   G  G  LG    +  S+P +   L+
Sbjct: 4131 NIRQISAGRCHSSAWTTPA-LSTRASGCSGIQLG----LPQSVPPQYNALK 4176


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 186/386 (48%), Gaps = 30/386 (7%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           + +S + + ++ F  L  ++ WG  I NG LG G     Y  S +      + V      
Sbjct: 3   IETSHNTTENKGFRRL-TMYCWGNTI-NGELGLGGIEENYILSPE------EIVNFESVN 54

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           ++ ++ACG  H + VT+ G++++ G    G+LGH  +   +  Q I  +  + +  VACG
Sbjct: 55  NIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGH--DGCRTKLQKIPGVESLVMTSVACG 112

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A+   G LYTWG  +   G LG  +        K+   L  + L  ISCG  H  
Sbjct: 113 EAHSMALNEWGQLYTWGSDS--CGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCM 170

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            +T+ G L+T+G   FG LG G    + S P  V +L GL  + ++CG +H+  V     
Sbjct: 171 ALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV----- 225

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    +  G +F WG  D G+LG   +     P  +  +    +  +A G D SV 
Sbjct: 226 ---------SKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 276

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSK 541
           LT  G V+T G+  YGQLG    ++ +VP +V  E+  S V +V CG  H   L  S  +
Sbjct: 277 LTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV-LELMGSTVTQVTCGRRHTLTLVPSKGR 335

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           VY++G G+ GQLG     N N+P LV
Sbjct: 336 VYSFGLGSVGQLGTKSSINSNTPQLV 361



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 27/271 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           S V++S + G AH    +  G ++ WG         G E   G  +        PK V++
Sbjct: 103 SLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL--GLETDEGIQYK-------PKIVKT 153

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWG-EESGGRLGHGREADVSHPQLIEILSGVNVE 299
             ++ +  I+CG +H + +T  GE+++WG  E G         +VS P L+  L G+ + 
Sbjct: 154 LASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPIS 213

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG YH+  V++SG ++ WG   +  G LG  S+ S   P ++   +  + + YI+ G
Sbjct: 214 FIACGGYHSFVVSKSGAVFGWGKNDF--GQLGINSQTSLSSPAQLK-TIRTVKVKYIAGG 270

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              +  +T  G +FT G G +G LGHG   +  +PR+V  L G   T+V+CG  HT  +V
Sbjct: 271 EDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 330

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
                    PS     G+++++G G  G+LG
Sbjct: 331 ---------PSK----GRVYSFGLGSVGQLG 348



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 147/323 (45%), Gaps = 26/323 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWG 321
           ++ WG    G LG G   E  +  P+ I     VN ++ VACG  HT AVT  G LY  G
Sbjct: 20  MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79

Query: 322 DGTYNSGLLGH-GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
              +  G LGH G +      +K+ G ++ + ++ ++CG  H+  +   G L+T+G  S 
Sbjct: 80  SNDF--GQLGHDGCRTKL---QKIPG-VESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 133

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG   D      P+ V+TL  +   ++SCG  H  A+              T+ G+L+
Sbjct: 134 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMAL--------------TNHGELY 179

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           TWG  + G+LG G     +  P  V  L+   I  +ACG   S  ++ SG V+  G   +
Sbjct: 180 TWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 239

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GQLG+     L        I    V+ +A G      LT    V+T G G  GQLGHG  
Sbjct: 240 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 299

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
            N   P  V  L    V +V CG
Sbjct: 300 SNEIVPRKVLELMGSTVTQVTCG 322



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 26/282 (9%)

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIH-LSYISCGLWHTAVVTSA 369
           R   +Y WG+    +G LG G     +I  P ++  N + ++ +  ++CG  HT  VT  
Sbjct: 16  RRLTMYCWGNTI--NGELGLGGIEENYILSPEEIV-NFESVNNIKSVACGNNHTLAVTED 72

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G L+  G   FG LGH D   T + +++  +  L  T V+CG  H+ A+           
Sbjct: 73  GQLYACGSNDFGQLGH-DGCRTKL-QKIPGVESLVMTSVACGEAHSMAL----------- 119

Query: 430 SGSTSCGKLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                 G+L+TWG    G+LG   D+  +  P+ V  L    + Q++CG+   +ALT  G
Sbjct: 120 ---NEWGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHG 176

Query: 489 HVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            +YT GS  +GQLG+ +  G V  PT V+  +    +  +ACG YH   ++ +  V+ WG
Sbjct: 177 ELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLP-ISFIACGGYHSFVVSKSGAVFGWG 235

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           K   GQLG   + + +SP  +  ++  +VK +  G +F+  +
Sbjct: 236 KNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFL 277


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 29/342 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I CG +H+V +   G +++ G  S G+LGH +      P+ +  L    + LV+CG+ H+
Sbjct: 38  IVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGIT--PEFVGALDTQKITLVSCGQAHS 95

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            AV   G ++ WG G    G LG G+ + +  IPR +    D   ++ + CG  H   ++
Sbjct: 96  LAVNEQGQVFAWGAG--EEGQLGLGTTETAVRIPRLIKRLCDH-RIAQVMCGNQHCIALS 152

Query: 368 SAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             G LFT+G  + G LG G    S   P+ +++L G+   +++ G  H+ A+ ++     
Sbjct: 153 KDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLS----- 207

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                    G +F WG    G+LG  D + R  P  +  L  + +  ++CG + + ALT 
Sbjct: 208 ---------GAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTK 258

Query: 487 SGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYT 544
            G ++T G  ++GQLG    A+ L+P RV  E+  + V ++ CG +H  A   +S  VY 
Sbjct: 259 DGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFAPSSGGVYA 317

Query: 545 WGKGANGQLGHG--DKDNRNSPTLVDFLKDK---QVKRVVCG 581
           +G  ++GQLG G    D    P    FL       V ++ CG
Sbjct: 318 FGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCG 359



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 157/325 (48%), Gaps = 24/325 (7%)

Query: 265 IFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG+   G+LG G E + +  P+   + +G  ++ + CG  H+  +   G +YT G  
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +   G LGH       I  +  G LD   ++ +SCG  H+  V   G +F +G G  G L
Sbjct: 61  S--CGQLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQL 115

Query: 384 GHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G G    +  IPR ++ L   R  +V CG  H  A+              +  G+LFTWG
Sbjct: 116 GLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIAL--------------SKDGQLFTWG 161

Query: 443 DGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
               G+LG G  EP +LFP+ +  L    + ++  G D S AL+ SG V+  G    GQL
Sbjct: 162 QNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQL 221

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G+  + D  VP  +    ++  V  ++CG  H AALT    ++T+G G+ GQLGHG   N
Sbjct: 222 GLNDIQDRAVPCHIKFLRSQKVVH-ISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTAN 280

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFT 585
              P  V  L   +V ++ CG + T
Sbjct: 281 ELLPRRVLELMGTEVSQITCGRHHT 305



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 156/315 (49%), Gaps = 30/315 (9%)

Query: 239 ESTMALDVHNI---ACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEILS 294
           E   ALD   I   +CG  H++ V +QG++F+WG    G+LG G  E  V  P+LI+ L 
Sbjct: 75  EFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLC 134

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHL 353
              +  V CG  H  A+++ G L+TWG  T  SG LG G  + S   P+ +  +L GI L
Sbjct: 135 DHRIAQVMCGNQHCIALSKDGQLFTWGQNT--SGQLGLGKGEPSKLFPQPLK-SLAGIPL 191

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + I+ G  H+  ++ +G +F +G    G LG  D    ++P  ++ LR  +   +SCG  
Sbjct: 192 AKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEE 251

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAA+              T  G LFT+GDG  G+LGHG     L P  V  L+   + Q
Sbjct: 252 HTAAL--------------TKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQ 297

Query: 474 VACGHDLSVALT-TSGHVYTMGSAAYGQLGVPVADG------LVPTRVDGEIAESFVEEV 526
           + CG   ++A   +SG VY  G  ++GQLG  V         L  + + G I  + V ++
Sbjct: 298 ITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGT-VTKI 356

Query: 527 ACGAYHVAALTSTSK 541
            CG  H   L S  +
Sbjct: 357 TCGGDHSFLLYSNDQ 371



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 164 PDNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRV 222
           P  + +   A +T +I+L S       G AH    +  G VF WG G   G LG G    
Sbjct: 70  PGITPEFVGALDTQKITLVSC------GQAHSLAVNEQGQVFAWGAG-EEGQLGLG---- 118

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-E 281
               + +T   +P+ ++      +  + CG +H + ++K G++F+WG+ + G+LG G+ E
Sbjct: 119 ----TTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                PQ ++ L+G+ +  +  G  H+ A++ SG ++ WG     +G LG        +P
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKN--KAGQLGLNDIQDRAVP 232

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
             +   L    + +ISCG  HTA +T  G LFTFGDGS+G LGHG   +  +PR V  L 
Sbjct: 233 CHIK-FLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELM 291

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG----DKEPR 457
           G   ++++CG  HT A              + S G ++ +G    G+LG G    DK P 
Sbjct: 292 GTEVSQITCGRHHTLAF-------------APSSGGVYAFGCNSHGQLGTGVLSADKSP- 337

Query: 458 LFPECVAPL---IDENICQVACGHDLSVALTTS 487
            +P   + L   I   + ++ CG D S  L ++
Sbjct: 338 -YPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 26/277 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG      G LG G + +     +      G  L  I CG  H+  +   G ++T G
Sbjct: 1   MLCWGKA--KDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCG 58

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             S G LGH     T  P  V  L   + T VSCG  H+ AV                 G
Sbjct: 59  SNSCGQLGHNKPGIT--PEFVGALDTQKITLVSCGQAHSLAV--------------NEQG 102

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F WG G++G+LG G  E  +  P  +  L D  I QV CG+   +AL+  G ++T G 
Sbjct: 103 QVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQ 162

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANG 551
              GQLG+   +   P+++  +  +S     + ++  G  H  AL+ +  V+ WGK   G
Sbjct: 163 NTSGQLGLGKGE---PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAG 219

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           QLG  D  +R  P  + FL+ ++V  + CG   TA +
Sbjct: 220 QLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAAL 256


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 177/368 (48%), Gaps = 29/368 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG  I NG LG G     Y  S +      + V      ++ ++ACG  H + VT+ 
Sbjct: 1   MYCWGNTI-NGELGLGGIEENYILSPE------EIVNFESVNNIKSVACGNNHTLAVTED 53

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++++ G    G+LGH  +   +  Q I  +  + +  VACGE H+ A+   G LYTWG 
Sbjct: 54  GQLYACGSNDFGQLGH--DGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGS 111

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            +   G LG  +        K+   L  + L  ISCG  H   +T+ G L+T+G   FG 
Sbjct: 112 DS--CGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQ 169

Query: 383 LGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG G    + S P  V +L GL  + ++CG +H+  V              +  G +F W
Sbjct: 170 LGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV--------------SKSGAVFGW 215

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G  D G+LG   +     P  +  +    +  +A G D SV LT  G V+T G+  YGQL
Sbjct: 216 GKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQL 275

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGDKD 559
           G    ++ +VP +V  E+  S V +V CG  H   L  S  +VY++G G+ GQLG     
Sbjct: 276 GHGSFSNEIVPRKV-LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSI 334

Query: 560 NRNSPTLV 567
           N N+P LV
Sbjct: 335 NSNTPQLV 342



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 27/271 (9%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           S V++S + G AH    +  G ++ WG         G E   G  +        PK V++
Sbjct: 84  SLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL--GLETDEGIQYK-------PKIVKT 134

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWG-EESGGRLGHGREADVSHPQLIEILSGVNVE 299
             ++ +  I+CG +H + +T  GE+++WG  E G         +VS P L+  L G+ + 
Sbjct: 135 LASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPIS 194

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG YH+  V++SG ++ WG   +  G LG  S+ S   P ++   +  + + YI+ G
Sbjct: 195 FIACGGYHSFVVSKSGAVFGWGKNDF--GQLGINSQTSLSSPAQLK-TIRTVKVKYIAGG 251

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              +  +T  G +FT G G +G LGHG   +  +PR+V  L G   T+V+CG  HT  +V
Sbjct: 252 EDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 311

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
                         S G+++++G G  G+LG
Sbjct: 312 -------------PSKGRVYSFGLGSVGQLG 329



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 147/323 (45%), Gaps = 26/323 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYTWG 321
           ++ WG    G LG G   E  +  P+ I     VN ++ VACG  HT AVT  G LY  G
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60

Query: 322 DGTYNSGLLGH-GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
              +  G LGH G +      +K+ G ++ + ++ ++CG  H+  +   G L+T+G  S 
Sbjct: 61  SNDF--GQLGHDGCRTKL---QKIPG-VESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 114

Query: 381 GALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG   D      P+ V+TL  +   ++SCG  H  A+              T+ G+L+
Sbjct: 115 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMAL--------------TNHGELY 160

Query: 440 TWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           TWG  + G+LG G     +  P  V  L+   I  +ACG   S  ++ SG V+  G   +
Sbjct: 161 TWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 220

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           GQLG+     L        I    V+ +A G      LT    V+T G G  GQLGHG  
Sbjct: 221 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 280

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
            N   P  V  L    V +V CG
Sbjct: 281 SNEIVPRKVLELMGSTVTQVTCG 303



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 26/278 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIH-LSYISCGLWHTAVVTSAGHLF 373
           +Y WG+    +G LG G     +I  P ++  N + ++ +  ++CG  HT  VT  G L+
Sbjct: 1   MYCWGNTI--NGELGLGGIEENYILSPEEIV-NFESVNNIKSVACGNNHTLAVTEDGQLY 57

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
             G   FG LGH D   T + +++  +  L  T V+CG  H+ A+               
Sbjct: 58  ACGSNDFGQLGH-DGCRTKL-QKIPGVESLVMTSVACGEAHSMAL--------------N 101

Query: 434 SCGKLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
             G+L+TWG    G+LG   D+  +  P+ V  L    + Q++CG+   +ALT  G +YT
Sbjct: 102 EWGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYT 161

Query: 493 MGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
            GS  +GQLG+ +  G V  PT V+  +    +  +ACG YH   ++ +  V+ WGK   
Sbjct: 162 WGSNEFGQLGLGLGPGNVSKPTLVNSLVGLP-ISFIACGGYHSFVVSKSGAVFGWGKNDF 220

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG   + + +SP  +  ++  +VK +  G +F+  +
Sbjct: 221 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFL 258


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 188/359 (52%), Gaps = 33/359 (9%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           F++L D+    E  ++G+LG      G  F+       P+ +E+   L +   A G RH+
Sbjct: 139 FENLSDI---PEPQSHGWLGIA----GMYFTWAPGRRQPRRLEAGTGLKLLKAASGERHS 191

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           +L+     ++S G+ S G+LG         P+ I+ LS V+++LV+CG+ H+ AV   G 
Sbjct: 192 LLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251

Query: 317 LYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           ++TWG G+   G LG G SK   ++P K++ +L GI +  +SCG +H+  ++  G +F++
Sbjct: 252 VFTWGAGS--EGQLGIGESKEISFMPTKIN-SLAGIKIIQVSCGHYHSLALSEDGQVFSW 308

Query: 376 GDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G    G LG G+++ S + P++V++L G+   +V+ G  H+ A+ +              
Sbjct: 309 GSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLM------------- 355

Query: 435 CGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            G  F WG+   G+L   G+  KE    P  +  L   N+  ++CG++ +  LT  G V+
Sbjct: 356 -GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVF 414

Query: 492 TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKG 548
           T G ++  QL   P +    P  ++G      V ++ CG+YH +A + +T +V + G+G
Sbjct: 415 TFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSYHTIAYVYTTGQVVSLGRG 471



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 23/301 (7%)

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+ +E  +G+ +   A GE H+  +  +  +Y+ GD +   G LG  S  S   P  + 
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNS--RGQLGQKSPQSTKRPEPIQ 226

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLR 404
             L  +H+  +SCG  H+  V   G +FT+G GS G LG G+    S +P ++ +L G++
Sbjct: 227 A-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 285

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECV 463
             +VSCG +H+ A+              +  G++F+WG   +G+LG G+    +  P+ V
Sbjct: 286 IIQVSCGHYHSLAL--------------SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 331

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAE 520
             L    + QVA G   S AL+  G  +  G+   GQL   G    + +      G +  
Sbjct: 332 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKT 391

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H + LT   +V+T+G  ++ QL H  +  R  P L++ +    V ++ C
Sbjct: 392 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI-GGHVSQIEC 450

Query: 581 G 581
           G
Sbjct: 451 G 451



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G  FTW  G +        +PR             + + A G   S+ L ++  VY+ G 
Sbjct: 158 GMYFTWAPGRR--------QPRRLEAGTG----LKLLKAASGERHSLLLFSNHRVYSCGD 205

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            + GQLG               ++   ++ V+CG  H  A+    +V+TWG G+ GQLG 
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 265

Query: 556 GD-KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ K+    PT ++ L   ++ +V CG
Sbjct: 266 GESKEISFMPTKINSLAGIKIIQVSCG 292


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 188/359 (52%), Gaps = 33/359 (9%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
           F++L D+    E  ++G+LG      G  F+       P+ +E+   L +   A G RH+
Sbjct: 139 FENLSDI---PEPQSHGWLGIA----GMYFTWAPGRRQPRRLEAGTGLKLLKAASGERHS 191

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           +L+     ++S G+ S G+LG         P+ I+ LS V+++LV+CG+ H+ AV   G 
Sbjct: 192 LLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251

Query: 317 LYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           ++TWG G+   G LG G SK   ++P K++ +L GI +  +SCG +H+  ++  G +F++
Sbjct: 252 VFTWGAGS--EGQLGIGESKEISFMPTKIN-SLAGIKIIQVSCGHYHSLALSEDGQVFSW 308

Query: 376 GDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G    G LG G+++ S + P++V++L G+   +V+ G  H+ A+ +              
Sbjct: 309 GSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLM------------- 355

Query: 435 CGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            G  F WG+   G+L   G+  KE    P  +  L   N+  ++CG++ +  LT  G V+
Sbjct: 356 -GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVF 414

Query: 492 TMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKG 548
           T G ++  QL   P +    P  ++G      V ++ CG+YH +A + +T +V + G+G
Sbjct: 415 TFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSYHTIAYVYTTGQVVSLGRG 471



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 23/301 (7%)

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+ +E  +G+ +   A GE H+  +  +  +Y+ GD +   G LG  S  S   P  + 
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNS--RGQLGQKSPQSTKRPEPIQ 226

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLR 404
             L  +H+  +SCG  H+  V   G +FT+G GS G LG G+    S +P ++ +L G++
Sbjct: 227 A-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 285

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECV 463
             +VSCG +H+ A+              +  G++F+WG   +G+LG G+    +  P+ V
Sbjct: 286 IIQVSCGHYHSLAL--------------SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 331

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAE 520
             L    + QVA G   S AL+  G  +  G+   GQL   G    + +      G +  
Sbjct: 332 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKT 391

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H + LT   +V+T+G  ++ QL H  +  R  P L++ +    V ++ C
Sbjct: 392 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI-GGHVSQIEC 450

Query: 581 G 581
           G
Sbjct: 451 G 451



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G  FTW  G +        +PR             + + A G   S+ L ++  VY+ G 
Sbjct: 158 GMYFTWAPGRR--------QPRRLEAGTGL----KLLKAASGERHSLLLFSNHRVYSCGD 205

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            + GQLG               ++   ++ V+CG  H  A+    +V+TWG G+ GQLG 
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 265

Query: 556 GD-KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ K+    PT ++ L   ++ +V CG
Sbjct: 266 GESKEISFMPTKINSLAGIKIIQVSCG 292


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 174/348 (50%), Gaps = 40/348 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    + G LG G         +VS       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--DEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  + ++  +P +V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLG------HGDKEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG         + P+L PE     I E + QVACG +
Sbjct: 206 -------TTDGELYIFGESENGKLGLPNELLSNHRIPQLVPE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            SV LT    VYT G   +GQLG+     L  T   +V   I    +  ++CG  H A L
Sbjct: 254 HSVVLTEDA-VYTFGLGQFGQLGLGTL--LFETSEPKVVENIGNKTISYISCGENHAALL 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKD--NRNSPTL-VDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N+ +PTL  +FLK   VK V CG
Sbjct: 311 TDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLK-FVVKLVACG 357



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 155/314 (49%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEIL 293
           P  V++     V   ACG  H ++ T+ G +++ G    G+LG G  E   +  ++    
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G L+ WGD +   G +G  + ++  +P +V+    G  +
Sbjct: 138 SQHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLPNILNACVPHQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+ FG+   G LG  + + ++  IP+ V  +   +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             H+  VV+  D+             ++T+G G  G+LG G     LF    P+ V  + 
Sbjct: 252 GEHS--VVLTEDA-------------VYTFGLGQFGQLGLG---TLLFETSEPKVVENIG 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           ++ I  ++CG + +  LT +G +YT G   +G+LG+ +    +   PT       +  V+
Sbjct: 294 NKTISYISCGENHAALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLC-CNFLKFVVK 352

Query: 525 EVACGAYHVAALTS 538
            VACG  H+    +
Sbjct: 353 LVACGGCHMVVFAA 366



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 18/188 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G       +A +P  V  T+   V  I+CG  H+  VT
Sbjct: 159 GRLFMWGDN--------SEGQIG--LPNILNACVPHQV--TIGKPVSWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++ +GE   G+LG   E   +H  PQL+  +    ++ VACG  H+  +T    +Y
Sbjct: 207 TDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQ-VACGGEHSVVLTEDA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  N+    +SYISCG  H A++T  G ++TFGDG
Sbjct: 265 TFGLGQF--GQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDG 322

Query: 379 SFGALGHG 386
             G LG G
Sbjct: 323 RHGKLGLG 330



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 27/225 (12%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++ ++G +F FG            I+ +IP +    +      +SCG  H+A V      
Sbjct: 7   LMPNSGAVFIFGKSK---------IAENIPGKF-WFKNDVAVHLSCGDEHSAVV------ 50

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++  
Sbjct: 51  --------TGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVS 102

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T  G+VY  G    GQLG+    +     RV    ++  +++++ G+   AALT   +++
Sbjct: 103 TEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTEDGRLF 162

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 163 MWGDNSEGQIGLPNILNACVPHQVTI--GKPVSWISCGYYHSAFV 205


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 184/362 (50%), Gaps = 24/362 (6%)

Query: 231 DALLPKAV-ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG--GRLGHGREADVSHP 287
           D  LP  V E  +     + A G     L+T + E++ WG  SG    L   R+  + +P
Sbjct: 73  DYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGS-SGVYALLPMRRDKRIYYP 131

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            L E    + +  +  G  H  A++++G++Y WG+  +  G  G G+K +  +P ++   
Sbjct: 132 TLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEF--GQTGLGNKEAQHLPIRMEFF 189

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
            D   +  +SCGL H+A V+  G ++T+G G  G LGH        P+E+  +RG   +R
Sbjct: 190 RD-KSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISR 248

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+CG   T  +             + + G+LFT+G+G+ G+LGHG++   L P  V PL 
Sbjct: 249 VTCGTDFTGLL-------------NETEGRLFTFGNGEAGQLGHGERGLCLEPS-VVPL- 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEV 526
            +N+ +VA G    +ALT  G  ++ G    G+LG     D L P  +        V  V
Sbjct: 294 -DNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSV 352

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           + G  H  ALT + +VY WG  A+G+LG G++ +  +PTL+  L DK+V R +CGL+ + 
Sbjct: 353 SAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSL 412

Query: 587 II 588
            I
Sbjct: 413 FI 414



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 22/314 (7%)

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
             R      P   E   +L +  I  G +H + ++K GE++ WG    G+ G G +    
Sbjct: 122 MRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQH 181

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P  +E     ++  V+CG  H+ AV++ G ++TWG G    G LGH        P++++
Sbjct: 182 LPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGI--DGQLGHNGTEDELKPKELT 239

Query: 346 GNLDGIHLSYISCGLWHTAVVT-SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
             + G  +S ++CG   T ++  + G LFTFG+G  G LGHG+     +   V  L  ++
Sbjct: 240 -VIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGER-GLCLEPSVVPLDNVK 297

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              V+ G  H  A+              T  G+ ++WG G+ GRLGHG  E  L PE + 
Sbjct: 298 --EVAAGGAHMLAL--------------TKDGQAWSWGWGEDGRLGHGATEDFLKPEPIP 341

Query: 465 PLIDE-NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
            L     +  V+ G   S+ALT SG VY  G  A G+LG+     ++   +   +A+  V
Sbjct: 342 TLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRV 401

Query: 524 EEVACGAYHVAALT 537
               CG  H   +T
Sbjct: 402 LRAICGLDHSLFIT 415



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG GI +G LG          +   D L PK +       +  + CG     L+ 
Sbjct: 211 GRVWTWGYGI-DGQLG---------HNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLN 260

Query: 261 K-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + +G +F++G    G+LGHG       P ++ +    NV+ VA G  H  A+T+ G  ++
Sbjct: 261 ETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL---DNVKEVAAGGAHMLALTKDGQAWS 317

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG G    G LGHG+      P  +      + +  +S G  H+  +T +G ++ +G  +
Sbjct: 318 WGWG--EDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNA 375

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            G LG G+  S   P  ++ L   R  R  CG+ H+  +  A
Sbjct: 376 SGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFITQA 417



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 168 NDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
            +R    E   + L +V   ++ G+        G  + WG G  +G LG G         
Sbjct: 280 GERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGWG-EDGRLGHGA-------- 330

Query: 228 RQTDALLPKAVEST-MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
              D L P+ + +   A+ V +++ G  H++ +T+ G+++ WG  + GRLG G E+ V  
Sbjct: 331 -TEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMT 389

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRS 314
           P LI+ L+   V    CG  H+  +T++
Sbjct: 390 PTLIKALADKRVLRAICGLDHSLFITQA 417


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 177/393 (45%), Gaps = 47/393 (11%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           ++F WG   A G LG G+ ++G S+        P     T  + +  ++CG  HA  +T 
Sbjct: 83  EIFSWGSDQA-GQLGLGQSQIGKSY--------PVPRYCTYNIGIKYVSCGDEHAAFITT 133

Query: 262 QGEIFSWGEESGGRLGHGREADVS-----HPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
              ++S G  + G+LG G   D+S      P L+E L       +ACG  HT   T  GD
Sbjct: 134 GNMVYSMGSNTNGQLGVG---DMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGD 190

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI----HLSYISCGLWHTAVVTSAGHL 372
           +Y+WG G +  G LG G+    ++P+ +  + D +     +  +S G+  +A++  +G +
Sbjct: 191 VYSWGQGIF--GALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRV 248

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           +T G    G LG G     +IP  ++     R + ++CG  H   +              
Sbjct: 249 YTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLML-------------- 293

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T  G +++ G    G+LG  +K     P  +  +    +  VA G   +     SG +Y 
Sbjct: 294 TKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYL 353

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            GS  +G+        L P RV  +  +     V+ G +   A+     VY+WG   +G+
Sbjct: 354 WGSGVFGEF-------LTPHRV--KTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGE 404

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           LG GD D R +P +++ L DK V  V CG NF+
Sbjct: 405 LGQGDFDERPTPQIINQLNDKIVTLVSCGRNFS 437



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 44/290 (15%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE------STMALDVHNIACGAR 254
           GDV+ WG+GI  G LG G            D  LPK +       ST +  +  ++ G R
Sbjct: 189 GDVYSWGQGIF-GALGAG---------NLDDQFLPKLIHISHDQLSTKSQMIQ-VSAGMR 237

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
            + ++ + G +++ G+   G+LG G     + P  I+      V ++ACG+ H   +T+ 
Sbjct: 238 FSAILDQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQ 296

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G +Y+ G  ++  G LG  +K +   P  +  ++  I + Y++ G +  ++   +G L+ 
Sbjct: 297 GTVYSCGANSF--GQLGLNNKRNSSSPLLIQ-DISHIPMRYVAAGSFSASISYDSGDLYL 353

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G G FG            P  V+T++G+    VS  + +   + V  D           
Sbjct: 354 WGSGVFGEF--------LTPHRVKTIKGMT---VSVSIGNHFGIAVNQD----------- 391

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
            G +++WG  + G LG GD + R  P+ +  L D+ +  V+CG + S+AL
Sbjct: 392 -GIVYSWGHNNSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 12/162 (7%)

Query: 437 KLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG    G+LG G  +  + +P       +  I  V+CG + +  +TT   VY+MGS
Sbjct: 83  EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGS 142

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEE----VACGAYHVAALTSTSKVYTWGKGANG 551
              GQLG  V D  +  +    + E+ +++    +ACGA H    T    VY+WG+G  G
Sbjct: 143 NTNGQLG--VGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFG 200

Query: 552 QLGHGDKDNRNSPTLVDFLKDK-----QVKRVVCGLNFTAII 588
            LG G+ D++  P L+    D+     Q+ +V  G+ F+AI+
Sbjct: 201 ALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAIL 242



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 10/106 (9%)

Query: 490 VYTMGSAAYGQLGVPVAD----GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           +++ GS   GQLG+  +       VP      I    ++ V+CG  H A +T+ + VY+ 
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIG---IKYVSCGDEHAAFITTGNMVYSM 140

Query: 546 GKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           G   NGQLG GD     +NSP LV+ L D++   + CG N T ++C
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHT-LVC 185


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 174/385 (45%), Gaps = 72/385 (18%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALD--VHNIACGARHAVLVTKQGEIFSWGEESGGRLGH 278
           R GY F        P  +E  M  +  ++ +A G  H V V  +G ++SWG  + G+LG 
Sbjct: 5   REGYPFQ-------PHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGL 57

Query: 279 GREADVSH----------PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY--- 325
               D+            P++IE+L  V V  +ACG+ HT A+T+ G LY+WG G     
Sbjct: 58  ASMKDLPTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQL 117

Query: 326 ---NSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              ++  +        + P+ K+   L  + +  ++CG  HT  V + GHL+++G G+ G
Sbjct: 118 GHPDTSAMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACG 177

Query: 382 ALGHGDHIS----------TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
            LGH D  S            IPR V  L+  +    SCG  HT   +V TD        
Sbjct: 178 QLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHT---MVLTDQ------- 227

Query: 432 STSCGKLFTWGDGDKGRLGHG---------DKEPRL-FPECVAPLIDENICQVACGHDLS 481
               G+++ +G G  G+LG G         D  P +  P+ +  L    I  ++CG   S
Sbjct: 228 ----GEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHS 283

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV-----------ACGA 530
           +AL+  GHVY  G A YGQLG+     L P   D +  + F ++V           +CG 
Sbjct: 284 MALSREGHVYAWGEATYGQLGLDDIRDL-PKNTDNKPYQPFPQKVVALMNKKIVAISCGE 342

Query: 531 YHVAALTSTSKVYTWGKGANGQLGH 555
            H  ALT    +Y++G    GQLG 
Sbjct: 343 THTLALTEGGHLYSFGGNTCGQLGQ 367



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 26/159 (16%)

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG--- 516
           P  +  L ++ I QVA G   +VA+   G+VY+ G++A GQLG+     L PT V+G   
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDL-PTDVEGYPY 72

Query: 517 -------EIAESF-VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD-----KDN--- 560
                  E+ +S  V ++ACG  H  ALT   K+Y+WG G  GQLGH D     KD    
Sbjct: 73  QPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 561 --RNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
             +  P L+  LK+ +VK+V CG   T  +     L+ W
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSW 171


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG---READVSHPQL 289
           L P  +  T    V  +ACG RH + +T  G++++ G     +LGH    +   +S   L
Sbjct: 29  LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLL 88

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           I  L    +  + CG  H+ A++  G + +WGD   + G LGH +        KV   L 
Sbjct: 89  IPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN--DCGQLGHATDKEIVQLPKVVRQLV 146

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTT 406
              +  I+CG  H+  +TS G L+++G   +G LG     D    + P  + TL G+   
Sbjct: 147 TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 206

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            ++CG  H+  +              +  G +F WG  + G+LG  D+  R +P  +  L
Sbjct: 207 AIACGGNHSFLI--------------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTL 252

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
               +  VACG + SV LT  G V+T G+ AYGQLG   +   +  R+  E+  S + +V
Sbjct: 253 RTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQV 312

Query: 527 ACGAYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           ACG  H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 313 ACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 28/283 (9%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG  ++    LG         P ++    D   +  ++CG  HT  +T+ G ++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGKVYAC 64

Query: 376 GDGSFGALGHGDHISTSIPRE-----VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           G   +  LGH   + T  PR      +  L+     ++ CG  H+ A+            
Sbjct: 65  GSNDYSQLGHD--LPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLAL------------ 110

Query: 431 GSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
             +  G++ +WGD D G+LGH  DKE    P+ V  L+ + + Q+ACG++ S+ALT+ G 
Sbjct: 111 --SDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGE 168

Query: 490 VYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           +Y+ GS  YGQLGV   + L     P R+   +    +  +ACG  H   ++ +  V+ W
Sbjct: 169 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIACGGNHSFLISKSGAVFGW 227

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G+   GQLG  D+ NR+ PT +  L+   V+ V CG  F+  +
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFL 270



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  I       V+ VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 322 DGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              Y+   LGH   +K     P  +   L    +  I CG  H+  ++  G + ++GD  
Sbjct: 66  SNDYSQ--LGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 123

Query: 380 FGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH  D     +P+ V  L      +++CG  H+ A+              TSCG+L
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL--------------TSCGEL 169

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPL-----IDENICQVACGHDLSVALTTSGHVYTM 493
           ++WG    G+LG     P     C  PL     +   +  +ACG + S  ++ SG V+  
Sbjct: 170 YSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 227

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQ
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 286

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG   N   P +V  L    + +V CG
Sbjct: 287 LGHGFSSNEMLPRMVMELMGSTITQVACG 315



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + +   +Y  GS ++GQLG+   +    L P+++     ++ V++VACG  H   LT+T 
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPW-TPDTAVQQVACGHRHTLFLTATG 59

Query: 541 KVYTWGKGANGQLGHG--DKDNRNSP-TLVDFLKDKQVKRVVCG 581
           KVY  G     QLGH    K  R SP  L+  L+D  + ++ CG
Sbjct: 60  KVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 197 FDSLGD---VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA 253
           F + GD   VF+  EG       G   ++G+ FS  ++ +LP+ V   M   +  +ACG 
Sbjct: 259 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEMLPRMVMELMGSTITQVACGN 316

Query: 254 RHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           RH + LV  +G ++++G  S G+LG      +  PQ++
Sbjct: 317 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354


>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1071

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 198/458 (43%), Gaps = 92/458 (20%)

Query: 202 DVFIWGE----GIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           DVF+WG           L    H V       T + +P       A D  +IA G RHAV
Sbjct: 220 DVFVWGRVPSVMTTPETLASSPHHVVVDRFVMTPSPVPAL--GGAACDPRSIALGTRHAV 277

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV-NVE-----------LVACGE 305
             T+ G +++WG+  GGRLGHG   D + P  +     V +V+           +V CG 
Sbjct: 278 AATRAGGVYTWGDGVGGRLGHGDVVDRATPTRVRAADDVFDVKAGGGGDGGARAVVRCGG 337

Query: 306 YHTCAVTRSGD----------LYTWGDGTYNSGLLGHGSKVSC------WIPRKV----- 344
             T  +TR  D          LY WG    + G+ G G   S       W   ++     
Sbjct: 338 DRTVVLTRDRDDDGVEDGGGALYAWGGSGDDFGVGGGGGGSSAEDAATRWTLSRIWFSSS 397

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL-------------GHGDHIST 391
           S +     ++ +S G++H A V+  G LFT+G+G+F AL                   S 
Sbjct: 398 SSSSPEARITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGGGGGGGASRPPTSE 457

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
             PR VE LRG     VSCGVWHTAAVV                G+L+TWGDGD G+LGH
Sbjct: 458 PRPRRVEGLRGRVVADVSCGVWHTAAVV--------------DDGQLYTWGDGDGGKLGH 503

Query: 452 G---DKEPRLFPECVAPLI----------DEN------ICQVACGHDLSVALTTSGHVYT 492
               D  P   P  VA             ++N      I   +CG   ++AL  +G  + 
Sbjct: 504 ADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASCGQSHTLALDANGVAWC 563

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           +GS   G+ G P      P R+   I ++ V  ++ G  H AALT   ++Y WG G  G 
Sbjct: 564 LGS--VGKTGAPPPP--TPRRI-ASIPDA-VASLSSGDSHAAALTRRGRLYVWGVGKRGA 617

Query: 553 LGHGDKDNRNSPTLVD-FLKDKQVKRVVCGLNFTAIIC 589
           LGHG      +P L++  L+ + ++ V CG   TA++ 
Sbjct: 618 LGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVV 655



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 113/276 (40%), Gaps = 44/276 (15%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNS-----------GLLGHGSKVSCWIPRKVS 345
            +  V+ G +H  AV+  G L+TWG+G +++           G        S   PR+V 
Sbjct: 405 RITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGGGGGGGASRPPTSEPRPRRVE 464

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRG 402
           G L G  ++ +SCG+WHTA V   G L+T+GDG  G LGH    D +    PR V     
Sbjct: 465 G-LRGRVVADVSCGVWHTAAVVDDGQLYTWGDGDGGKLGHADVTDDVPVPTPRRVADWTP 523

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT---------WGDGDKGRLGHGD 453
                      + + +VV           + SCG+  T         W  G  G+ G   
Sbjct: 524 GGGGGGGGEEKNASEIVVIV---------AASCGQSHTLALDANGVAWCLGSVGKTG--- 571

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPT 512
             P   P  +A + D  +  ++ G   + ALT  G +Y  G    G LG     + L P 
Sbjct: 572 APPPPTPRRIASIPD-AVASLSSGDSHAAALTRRGRLYVWGVGKRGALGHGGFGEELAPR 630

Query: 513 RVDGEIAESFVEEVACG------AYHVAALTSTSKV 542
            ++G +    + EV CG          AALT   K+
Sbjct: 631 LLEGALEGRTIREVTCGPESTAVVVDAAALTKREKI 666



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 104/244 (42%), Gaps = 32/244 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSF--SRQ-TDALLPKAVESTMALDVHNIACGARHAV 257
           G +F WGEG  +    GG    G     SR  T    P+ VE      V +++CG  H  
Sbjct: 423 GALFTWGEGAFHALGHGGGGGGGGGGGASRPPTSEPRPRRVEGLRGRVVADVSCGVWHTA 482

Query: 258 LVTKQGEIFSWGEESGGRLGHGREAD---VSHPQLIEILSG----------------VNV 298
            V   G++++WG+  GG+LGH    D   V  P+ +   +                 V +
Sbjct: 483 AVVDDGQLYTWGDGDGGKLGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVI 542

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
              +CG+ HT A+  +G  +  G        +G         PR+++   D +  + +S 
Sbjct: 543 VAASCGQSHTLALDANGVAWCLGS-------VGKTGAPPPPTPRRIASIPDAV--ASLSS 593

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAA 417
           G  H A +T  G L+ +G G  GALGHG       PR +E  L G     V+CG   TA 
Sbjct: 594 GDSHAAALTRRGRLYVWGVGKRGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAV 653

Query: 418 VVVA 421
           VV A
Sbjct: 654 VVDA 657


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 172/321 (53%), Gaps = 26/321 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +E+   L +   A G RH++L+     ++S G+ S G+LG         P+ I+ LS
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHL 353
            V+++LV+CG+ H+ AV   G ++TWG G+   G LG G SK   ++P K++ +L GI +
Sbjct: 79  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGS--EGQLGIGESKEISFMPTKIN-SLAGIKI 135

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGV 412
             +SCG +H+  ++  G +F++G    G LG G+++ S + P++V++L G+   +V+ G 
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDE 469
            H+ A+ +               G  F WG+   G+L   G+  KE    P  +  L   
Sbjct: 196 THSFALSLM--------------GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL 241

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVAC 528
           N+  ++CG++ +  LT  G V+T G ++  QL   P +    P  ++G      V ++ C
Sbjct: 242 NVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIEC 299

Query: 529 GAYH-VAALTSTSKVYTWGKG 548
           G+YH +A + +T +V + G+G
Sbjct: 300 GSYHTIAYVYTTGQVVSLGRG 320



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 23/301 (7%)

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+ +E  +G+ +   A GE H+  +  +  +Y+ GD +   G LG  S  S   P  + 
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNS--RGQLGQKSPQSTKRPEPIQ 75

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLR 404
             L  +H+  +SCG  H+  V   G +FT+G GS G LG G+    S +P ++ +L G++
Sbjct: 76  A-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 134

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECV 463
             +VSCG +H+ A+              +  G++F+WG   +G+LG G+    +  P+ V
Sbjct: 135 IIQVSCGHYHSLAL--------------SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 180

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAE 520
             L    + QVA G   S AL+  G  +  G+   GQL   G    + +      G +  
Sbjct: 181 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKT 240

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H + LT   +V+T+G  ++ QL H  +  R  P L++ +    V ++ C
Sbjct: 241 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI-GGHVSQIEC 299

Query: 581 G 581
           G
Sbjct: 300 G 300



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A  T  I L S     S    H+     G VF WG G + G LG GE +          +
Sbjct: 76  ALSTVHIDLVSCGKEHSVAVCHQ-----GRVFTWGAG-SEGQLGIGESK--------EIS 121

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
            +P  + S   + +  ++CG  H++ +++ G++FSWG    G+LG G      + PQ ++
Sbjct: 122 FMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVK 181

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDG 350
            L G+ +  VA G  H+ A++  G  + WG+       L G+ +K   + P  + G L  
Sbjct: 182 SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKT 240

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +++ YISCG  HT+V+T  G +FTFG  S   L H        P+ +E + G   +++ C
Sbjct: 241 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIEC 299

Query: 411 GVWHTAAVVVAT 422
           G +HT A V  T
Sbjct: 300 GSYHTIAYVYTT 311



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G  FTW  G +        +PR             + + A G   S+ L ++  VY+ G 
Sbjct: 7   GMYFTWAPGRR--------QPRRLEAGTGL----KLLKAASGERHSLLLFSNHRVYSCGD 54

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            + GQLG               ++   ++ V+CG  H  A+    +V+TWG G+ GQLG 
Sbjct: 55  NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 114

Query: 556 GD-KDNRNSPTLVDFLKDKQVKRVVCG 581
           G+ K+    PT ++ L   ++ +V CG
Sbjct: 115 GESKEISFMPTKINSLAGIKIIQVSCG 141


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 178/368 (48%), Gaps = 45/368 (12%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IACG  H + +T+ G +++ G  + G+LG   E   S  + +E+        ++ G  H+
Sbjct: 135 IACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFS-TEPVEVRIPKEAMHISAGYNHS 193

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           C VT  G+LY WG  +     LG  S  +  +P KV  +LDGI +   + G  H+  V  
Sbjct: 194 CVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHSIAVAD 252

Query: 369 AGHLFTFGDGSFGALGHGDHISTSI----------PREVETLRGLRTTRVSCGVWHTAAV 418
            G +F++GDG  G LGHG H ST +          PR ++ L G++   V+ G+ H+A V
Sbjct: 253 GGEVFSWGDGRSGRLGHG-HESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACV 311

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ-VACG 477
                            G ++ +G+    R+  G+      P  ++ L+D   C+ VACG
Sbjct: 312 --------------DENGAVYIFGERATNRVSFGEANKATTPSLISTLLD---CEEVACG 354

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
              +  LT  G +Y+ GS   G LG    +   +P RV+G  ++S V +V+CG  H AA+
Sbjct: 355 GYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414

Query: 537 TSTSKVYTWGKGAN------------GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            S   ++TWG G +            GQLGHG   +   PT +D  ++ +V +V CG N 
Sbjct: 415 -SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNH 473

Query: 585 TAIICLHK 592
           T  I  +K
Sbjct: 474 TGAILEYK 481



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 158/325 (48%), Gaps = 48/325 (14%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA--DVSHPQLIEILSG 295
           VE  +  +  +I+ G  H+ +VT  GE++ WG  S G+LG G+++   V  P  ++ L G
Sbjct: 175 VEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDG 234

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK---------VSCWIPRKVSG 346
           + ++  A G  H+ AV   G++++WGDG   SG LGHG +          S   PR +  
Sbjct: 235 IVIKRAALGSDHSIAVADGGEVFSWGDG--RSGRLGHGHESTFLGFLKSTSEHTPRLIK- 291

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L+GI + +++ G+ H+A V   G ++ FG+ +   +  G+    + P  + TL  L   
Sbjct: 292 ELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTL--LDCE 349

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-AP 465
            V+CG +HT  +              T  G L++WG  + G LG+G       PE V  P
Sbjct: 350 EVACGGYHTCVL--------------TKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGP 395

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTM------------GSAAYGQLGVPV-ADGLVPT 512
                + +V+CG   + A+ + G ++T             G ++ GQLG     D + PT
Sbjct: 396 FSKSPVSKVSCGWKHTAAI-SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPT 454

Query: 513 RVD-GEIAESFVEEVACGAYHVAAL 536
           ++D GE  +  V +V+CG  H  A+
Sbjct: 455 KIDLGENVK--VVQVSCGFNHTGAI 477



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 145/307 (47%), Gaps = 52/307 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTMALDVHNIACGARHAVLV 259
           G++++WG   +NG LG G+        +   A+ LP  V+S   + +   A G+ H++ V
Sbjct: 200 GELYMWGVN-SNGQLGLGK--------KSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAV 250

Query: 260 TKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSGVNVELVACGEYHTCA 310
              GE+FSWG+   GRLGHG E+             P+LI+ L G+ V+ VA G  H+  
Sbjct: 251 ADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSAC 310

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V  +G +Y +G+   N    G  +K +   P  +S  LD      ++CG +HT V+T  G
Sbjct: 311 VDENGAVYIFGERATNRVSFGEANKAT--TPSLISTLLD---CEEVACGGYHTCVLTKGG 365

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            L+++G    G LG+G    + +P  VE        ++VSCG  HTAA+           
Sbjct: 366 DLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI----------- 414

Query: 430 SGSTSCGKLFTWGDGDK------------GRLGHGDKEPRLFPECVAPLIDENICQVACG 477
               S G +FTWG G              G+LGHG     + P  +    +  + QV+CG
Sbjct: 415 ----SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCG 470

Query: 478 HDLSVAL 484
            + + A+
Sbjct: 471 FNHTGAI 477



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 145/345 (42%), Gaps = 56/345 (16%)

Query: 268 WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS 327
           WG    GRLG G       P          ++ +ACG  HT  +T SG +Y    G  N 
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYA--TGLNNF 159

Query: 328 GLLGHGSK-------VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G LG   +       V   IP++           +IS G  H+ VVT+ G L+ +G  S 
Sbjct: 160 GQLGISDEKRFSTEPVEVRIPKEAM---------HISAGYNHSCVVTADGELYMWGVNSN 210

Query: 381 GALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           G LG G   + ++  P +V++L G+   R + G  H+ AV                 G++
Sbjct: 211 GQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVA--------------DGGEV 256

Query: 439 FTWGDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGHDLSVALTTSGH 489
           F+WGDG  GRLGHG +   L          P  +  L    +  VA G   S  +  +G 
Sbjct: 257 FSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGA 316

Query: 490 VYTMGSAA-----YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           VY  G  A     +G+        L+ T +D        EEVACG YH   LT    +Y+
Sbjct: 317 VYIFGERATNRVSFGEANKATTPSLISTLLD-------CEEVACGGYHTCVLTKGGDLYS 369

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQ-VKRVVCGLNFTAII 588
           WG   NG LG+G     + P  V+    K  V +V CG   TA I
Sbjct: 370 WGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 5/154 (3%)

Query: 432 STSCGKLF--TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           ++  GK F   WG+GD GRLG G+ + +  P   +    E +  +ACG   ++ LT SG 
Sbjct: 91  ASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGR 150

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           VY  G   +GQLG+          V+  I +  +  ++ G  H   +T+  ++Y WG  +
Sbjct: 151 VYATGLNNFGQLGISDEKRFSTEPVEVRIPKEAM-HISAGYNHSCVVTADGELYMWGVNS 209

Query: 550 NGQLGHGDKDNR--NSPTLVDFLKDKQVKRVVCG 581
           NGQLG G K  +  + PT VD L    +KR   G
Sbjct: 210 NGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALG 243


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 168/340 (49%), Gaps = 27/340 (7%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           +I+CG  H  +VT+ G+++ +G  + G+LG G +  V+ P  ++ L    V+L ACG  H
Sbjct: 39  HISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNH 98

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T   T  G++Y  G  +   G LG G          +S       +  ++ G + +AV+T
Sbjct: 99  TLICTEQGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLT 156

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G L  +GD S G +G GD    S+P +V+   G   + +SCG +H+A +         
Sbjct: 157 EDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDI--GKPVSCISCGYYHSALI--------- 205

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPLIDENICQVACGHDLSVALT 485
                T  G+L+T+G+ + G+LG   K+ +    P+ V+  I   + +VACG   +V L 
Sbjct: 206 -----TQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISGKVSKVACGGGHTVVL- 258

Query: 486 TSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
             G VYT G   YGQL  G  V +   P  VD  + +  +  +ACG  H A +T    +Y
Sbjct: 259 AEGDVYTFGLGQYGQLGHGTFVFETSEPKTVD-HLGKHKICHIACGENHTALITENGLMY 317

Query: 544 TWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T+G G +G+LG G+++  N   PTL        V  V CG
Sbjct: 318 TFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACG 357



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+QG +++ G  S G+LG G   + S   LI   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ +A G Y +  +T  G L  WGD +   G +G G K    +P +V     G  +
Sbjct: 138 KQHKIKQLAAGSYTSAVLTEDGQLVMWGDNS--EGQIGLGDKAYVSVPHQVD---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S ISCG +H+A++T  G L+TFG+   G LG       +  +P+ V  + G + ++V+CG
Sbjct: 193 SCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT  VV+A              G ++T+G G  G+LGHG     +F    P+ V  L 
Sbjct: 252 GGHT--VVLAE-------------GDVYTFGLGQYGQLGHG---TFVFETSEPKTVDHLG 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVE 524
              IC +ACG + +  +T +G +YT G   +G+LG+      +  VPT          V 
Sbjct: 294 KHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSN-FLRFIVH 352

Query: 525 EVACGAYHVAALTS 538
            VACG  H+    S
Sbjct: 353 SVACGGCHMLVFAS 366



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 135/292 (46%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  ISCGDEHTSVVTENGKLYMFG--SNNWGQLGFGSKNAVNKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T  G+++  G  S G LG GD    S    +         +      +T+AV+ 
Sbjct: 97  NHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVL- 155

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       T  G+L  WGD  +G++G GDK     P  V   I + +  ++CG+  
Sbjct: 156 ------------TEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVD--IGKPVSCISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+    + +  +P  V G      V +VACG  H   L 
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG--ISGKVSKVACGGGHTVVL- 258

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           +   VYT+G G  GQLGHG      S P  VD L   ++  + CG N TA+I
Sbjct: 259 AEGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALI 310



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 11/129 (8%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +S  VS  + G  H    + GDV+ +G G   G LG G      +F  +T    PK V+ 
Sbjct: 241 ISGKVSKVACGGGHTVVLAEGDVYTFGLG-QYGQLGHG------TFVFETSE--PKTVDH 291

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNV 298
                + +IACG  H  L+T+ G ++++G+   G+LG G E   +   P L        V
Sbjct: 292 LGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIV 351

Query: 299 ELVACGEYH 307
             VACG  H
Sbjct: 352 HSVACGGCH 360


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 168/379 (44%), Gaps = 71/379 (18%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L+PKA++      +  I CG  H V +T  GE++S G     +LGHG+    S  QL ++
Sbjct: 31  LIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQ----SGGQLAKV 86

Query: 293 --LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLD 349
             L    +  VACG YH  A+T +G L+TWG  +  +G LG  G      + R +S +  
Sbjct: 87  VALEHYRIISVACGAYHNAAITYNGLLFTWGCNS--NGQLGREGDDTGVKLVRALSDH-- 142

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTR 407
              +  +S G+ HT V+T    +F FG    G LG G     S SIP+++  L GL   R
Sbjct: 143 --KVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRR 200

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-------HGDKEPRL-- 458
           +  G WH+  + V+              G L+ WG  + G+LG         D +  L  
Sbjct: 201 IVAGGWHSFVLTVS--------------GSLYAWGSNNYGQLGLSYFGSSPNDHQNELTL 246

Query: 459 -------------------------------FPECVAPLIDENICQVACGHDLSVALTTS 487
                                           P  V  L    +  +ACG   +VALT  
Sbjct: 247 KCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRD 306

Query: 488 GHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTW 545
           G V+T G+  YGQLG   +  G+   R   E   + V ++ACG +H  AL   T +++ +
Sbjct: 307 GGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKTGRLFAF 366

Query: 546 GKGANGQLGHGDKDNRNSP 564
           G+G N QLG GD  NR  P
Sbjct: 367 GQGTNAQLGMGDTKNRLLP 385



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 142/328 (43%), Gaps = 70/328 (21%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A E +RI   SV   + H +A       G +F WG   +NG LG           R+ D 
Sbjct: 88  ALEHYRII--SVACGAYHNAA---ITYNGLLFTWGCN-SNGQLG-----------REGDD 130

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR--EADVSHPQLI 290
              K V +     V  ++ G  H +++T    +F++G    G+LG G   E  VS PQ I
Sbjct: 131 TGVKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQI 190

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY----------------NSGLLGHGS 334
             LSG+ V  +  G +H+  +T SG LY WG   Y                N   L  GS
Sbjct: 191 LCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGS 250

Query: 335 KVSCWIPRKVSGN---------------------LDGIHLSYISCGLWHTAVVTSAGHLF 373
             S  +  + S N                     L G  + Y++CG  HT  +T  G +F
Sbjct: 251 VGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVF 310

Query: 374 TFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           TFG G +G LGH +  I  S+PR++    G   T+++CG +HT A+V  T          
Sbjct: 311 TFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKT---------- 360

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
              G+LF +G G   +LG GD + RL P
Sbjct: 361 ---GRLFAFGQGTNAQLGMGDTKNRLLP 385



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 54/265 (20%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG--- 277
           ++G  +S +    +P+ +     L V  I  G  H+ ++T  G +++WG  + G+LG   
Sbjct: 173 QLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSY 232

Query: 278 -------HGRE------------------------------ADVSHPQLIEILSGVNVEL 300
                  H  E                              ++VS P  ++ L G  V  
Sbjct: 233 FGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVY 292

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCG 359
           +ACGE HT A+TR G ++T+G G Y  G LGH  S +   +PRK++  +  + ++ I+CG
Sbjct: 293 LACGETHTVALTRDGGVFTFGAGRY--GQLGHNESTIGISVPRKITEFMGNV-VTQIACG 349

Query: 360 LWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            +HT A+V   G LF FG G+   LG GD  +  +P  V      +   VS     +   
Sbjct: 350 RFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPV------KGHWVSSHKSSSNES 403

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGD 443
            V TDSSSS P       ++F+ GD
Sbjct: 404 TVGTDSSSSKP---YIIRRIFSGGD 425



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 432 STSCGKLFTWGDGDKGRL--GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           S++  +LF WG  ++G+L     D    L P+ +       + Q+ CG+  +V LT  G 
Sbjct: 3   SSATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGE 62

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           VY+ G   + QLG   + G +   V  E     +  VACGAYH AA+T    ++TWG  +
Sbjct: 63  VYSCGCNEFQQLGHGQSGGQLAKVVALEHYR--IISVACGAYHNAAITYNGLLFTWGCNS 120

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           NGQLG    D      LV  L D +V +V  G+  T ++
Sbjct: 121 NGQLGREGDD--TGVKLVRALSDHKVVQVSLGVEHTLVL 157


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 138/257 (53%), Gaps = 23/257 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK VE    + V +IACG+ H+  +T  G + +WG+   GRLGHG   D   P+L+E L 
Sbjct: 10  PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL 69

Query: 295 GVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           G     +AC  G+  T  +T   ++++WGDG Y  G LG G    C +P K+  +L G+ 
Sbjct: 70  GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLG 126

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSC 410
           +  + CG   +  +T +G ++T+G G F  LGHG  DH+    P++V  L+G +   ++ 
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKKIISIAT 184

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H  A    +DS           G+++TWGD D+G+LG G      +P  V  L  ++
Sbjct: 185 GSLHCVA---CSDS-----------GEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKH 230

Query: 471 ICQVACGHDLSVALTTS 487
           I +V CG   ++AL+TS
Sbjct: 231 IVKVTCGSAHTLALSTS 247



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 149/318 (46%), Gaps = 35/318 (11%)

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
           HG       P+L+E L+G++V  +ACG  H+ A+T SG + TWG G Y  G LGHG    
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSED 58

Query: 338 CWIPRKVSGNLDGIHLSYISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
              P+ V   L G     I+CG     T  +T   +++++GDG +G LG G      +P 
Sbjct: 59  QLRPKLVEALL-GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++E+L GL   +V CG   + A+              T  G ++TWG GD  RLGHG  +
Sbjct: 118 KIESLAGLGVVKVECGSQFSVAL--------------TKSGAVYTWGKGDFHRLGHGSVD 163

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD 515
               P+ VA L  + I  +A G    VA + SG VYT G    GQLG      +   R+ 
Sbjct: 164 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLV 223

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
             +    + +V CG+ H  AL+++            QL    +   N P   D ++D   
Sbjct: 224 TALQGKHIVKVTCGSAHTLALSTS------------QLSERLRPLPNPPLEYDLVRDLAP 271

Query: 576 K----RVVCGLNFTAIIC 589
           +    R++   +F+ ++C
Sbjct: 272 EALHARLILLHHFSELVC 289



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 167 SNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYS 225
           S DR    E    +S++ +   S+H +A     + G V  WG+G   G LG G+      
Sbjct: 6   SYDRPKLVEHLNGMSVADIACGSAHSAA---ITASGHVLTWGKG-RYGRLGHGD------ 55

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREAD 283
                D L PK VE+ +     +IACG+  A  + +T    ++SWG+   G+LG G    
Sbjct: 56  ---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 112

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P  IE L+G+ V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+K
Sbjct: 113 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKK 170

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V+  L G  +  I+ G  H    + +G ++T+GD   G LG G   +   PR V  L+G 
Sbjct: 171 VAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGK 229

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSP 429
              +V+CG  HT A+  +  S    P
Sbjct: 230 HIVKVTCGSAHTLALSTSQLSERLRP 255



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           V ++ACG+ H AA+T++  V TWGKG  G+LGHGD +++  P LV+ L   +   + CG 
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 80

Query: 583 NFTAIICL 590
                +C+
Sbjct: 81  GDAQTLCI 88


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 169/370 (45%), Gaps = 58/370 (15%)

Query: 246  VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP----QLIEILSGVNVEL- 300
            V  IACG RH  L+T    ++++G    GRLGHG E D + P        +++   VE  
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 301  ----VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
                V+CG  HT  VT +GDLY +G G   +G LG G   S   P +V    D  +++ +
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWG--EAGRLGTGETGSSLYPSRV----DLRNIAAV 1359

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
            +CG  HT  +TS G +F FG G  G LG+G      +P  VE L       ++ G  H+ 
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSC 1419

Query: 417  AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDEN----- 470
            A+              +  G++ TWG G  G LGHG ++  L P  V  P  + N     
Sbjct: 1420 AL--------------SRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLI 1465

Query: 471  -----ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG---VPVADGLVPTRVDGEI-AES 521
                 +  VACG   ++A T  G +Y  G AA GQLG   +   D +V +  +  +   S
Sbjct: 1466 HDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSS 1525

Query: 522  FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV-VC 580
             +  +ACG +  A  ++  +++ WG  A G     D            ++D  VKRV V 
Sbjct: 1526 GIRGIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLD------------VEDAHVKRVGVL 1573

Query: 581  G-LNFTAIIC 589
            G   F+ I C
Sbjct: 1574 GEFEFSQIAC 1583



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 54/304 (17%)

Query: 201  GDV--FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
            GD+  F WGE    G LG GE            +L P  V+     ++  +ACG  H + 
Sbjct: 1324 GDLYGFGWGEA---GRLGTGE---------TGSSLYPSRVDLR---NIAAVACGREHTLA 1368

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +T +G +F++G   GGRLG+G E D   P L+E L   ++  +A GE H+CA++R G++ 
Sbjct: 1369 LTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVL 1428

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSG-----NLDG-IH----LSYISCGLWHTAVVTS 368
            TWG G+  SG LGHG++ +C IP  V G     N++  IH    ++ ++CG +HT   T+
Sbjct: 1429 TWGFGS--SGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATN 1486

Query: 369  AGHLFTFGDGSFGALGHGDHISTS-----IPREVE--TLRGLRTTRVSCGVWHTAAVVVA 421
             G L+ +GD + G LG  +H+S        P+E+   T  G+R   ++CG + +A     
Sbjct: 1487 DGVLYGWGDAAAGQLG-AEHLSAQDLVVLSPKEIRLPTSSGIRG--IACGTFTSAVC--- 1540

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                       ++ G+LF WG    G     D E       V  L +    Q+ACG   +
Sbjct: 1541 -----------STQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYHA 1588

Query: 482  VALT 485
            VA+T
Sbjct: 1589 VAIT 1592



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 38/193 (19%)

Query: 404  RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
            R  +++CG  HTA +              T    L+T+G G+ GRLGHG +E     +C 
Sbjct: 1245 RVVQIACGYRHTALI--------------TDDRHLYTFGHGECGRLGHGTEE-----DCT 1285

Query: 464  AP--------LIDEN------ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADG 508
             P        LI         +  V+CG + ++ +T +G +Y  G    G+LG       
Sbjct: 1286 DPIPVGYFTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS 1345

Query: 509  LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
            L P+RVD       +  VACG  H  ALTS  +V+ +G G  G+LG+G + +   P LV+
Sbjct: 1346 LYPSRVDLRN----IAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVE 1401

Query: 569  FLKDKQVKRVVCG 581
             L++  +  +  G
Sbjct: 1402 GLEEYSIVAIAAG 1414



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 8/132 (6%)

Query: 183  SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVEST 241
            SVV+S + GS H    +  D  ++G G A     G EH      S Q   +L PK +   
Sbjct: 1469 SVVTSVACGSYHT-LAATNDGVLYGWGDAAAGQLGAEH-----LSAQDLVVLSPKEIRLP 1522

Query: 242  MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
             +  +  IACG   + + + QG++F WG  + G  G   + + +H + + +L       +
Sbjct: 1523 TSSGIRGIACGTFTSAVCSTQGQLFMWGSPAAGN-GAPLDVEDAHVKRVGVLGEFEFSQI 1581

Query: 302  ACGEYHTCAVTR 313
            ACG YH  A+TR
Sbjct: 1582 ACGAYHAVAITR 1593


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 178/356 (50%), Gaps = 44/356 (12%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           ++   A G RH++L+   G + S G+ S G+LG         P+ I+ L  + VELV+CG
Sbjct: 35  ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCG 94

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           + H+ AV   G ++ WG G+   G LG G  K    IP+K+   L GI +  +SCG +H+
Sbjct: 95  KEHSLAVCYKGRVFAWGAGS--EGQLGIGEFKEINLIPQKIK-TLTGIKIIQVSCGNYHS 151

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             ++  G +F++G  S G LG G  + S + P+ V +L G+   +V+ G  H+ A+    
Sbjct: 152 LALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFAL---- 207

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHD 479
                S SG++     F WG  + G+L   G   P     P  V+ L    +  ++CGH+
Sbjct: 208 -----SLSGTS-----FGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHE 257

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALT 537
            +  LT +G V+T G  + GQLG  P A+   P  ++G   E  V ++ CG+YH +A + 
Sbjct: 258 HTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVY 315

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLV------------DFLKDKQVKRVVCG 581
           +T +V ++G+G +       K   N P L+            + L D QVK +  G
Sbjct: 316 TTGQVVSFGRGPSC------KSCSNHPELLTENTDVTCLISAERLVDVQVKHIFAG 365



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 22/254 (8%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET R+ L S     S    ++     G VF WG G + G LG GE +           
Sbjct: 82  ALETLRVELVSCGKEHSLAVCYK-----GRVFAWGAG-SEGQLGIGEFK--------EIN 127

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
           L+P+ +++   + +  ++CG  H++ +++ G++FSWG  S G+LG G+E    + PQ + 
Sbjct: 128 LIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVR 187

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSG---LLGHGSKVSCWIPRKVSGNL 348
            L G+ +  VA G  H+ A++ SG  + WG    N+G     G    V  + PR VS  L
Sbjct: 188 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGSN--NAGQLAFFGSNVPVQSYKPRSVSA-L 244

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             + + YISCG  HTAV+T  G +FTFGD S G LGH      + P+ +E + GL  +++
Sbjct: 245 KTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL-VSQI 303

Query: 409 SCGVWHTAAVVVAT 422
            CG +HT A V  T
Sbjct: 304 DCGSYHTLAYVYTT 317



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 24/266 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           PK +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   +++  PQ I+ L
Sbjct: 77  PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL 136

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  V+CG YH+ A++  G +++WG  ++  G LG G ++      +   +LDGI L
Sbjct: 137 TGIKIIQVSCGNYHSLALSEDGQVFSWGSNSH--GQLGLGKELPSQASPQRVRSLDGIPL 194

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  + G L   G    + +  PR V  L+ L    +SC
Sbjct: 195 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISC 254

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LGH     +  P+ +   I+  
Sbjct: 255 GHEHTAVL--------------TQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG-IEGL 299

Query: 471 ICQVACG--HDLSVALTTSGHVYTMG 494
           + Q+ CG  H L+   TT G V + G
Sbjct: 300 VSQIDCGSYHTLAYVYTT-GQVVSFG 324



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 26/268 (9%)

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  L   + G  H+ ++ S G + + GD S G LG         P+ ++ L  LR   VS
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLID 468
           CG  H+ AV                 G++F WG G +G+LG G+ KE  L P+ +  L  
Sbjct: 93  CGKEHSLAVCYK--------------GRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTG 138

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VE 524
             I QV+CG+  S+AL+  G V++ GS ++GQLG+      +P++   +   S     + 
Sbjct: 139 IKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKE---LPSQASPQRVRSLDGIPLA 195

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +VA G  H  AL+ +   + WG    GQL   G         P  V  LK   V  + CG
Sbjct: 196 QVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCG 255

Query: 582 LNFTAIICLHKWVSSVDHSVCSSC-HNP 608
              TA++  +  V +   + C    H+P
Sbjct: 256 HEHTAVLTQNGKVFTFGDNSCGQLGHSP 283



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 22/171 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIAN--GFLGGGEHRVGYSFSRQTDALLPK 236
           I L+ V +  +H  A       G  F WG   A    F G       Y          P+
Sbjct: 192 IPLAQVAAGGAHSFA---LSLSGTSFGWGSNNAGQLAFFGSNVPVQSYK---------PR 239

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
           +V +   L V  I+CG  H  ++T+ G++F++G+ S G+LGH   A+ + PQL+E + G+
Sbjct: 240 SVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL 299

Query: 297 NVELVACGEYHTCA-VTRSGDLYTWGDG------TYNSGLLGHGSKVSCWI 340
            V  + CG YHT A V  +G + ++G G      + +  LL   + V+C I
Sbjct: 300 -VSQIDCGSYHTLAYVYTTGQVVSFGRGPSCKSCSNHPELLTENTDVTCLI 349


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 32/299 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H  LVT+ G ++++G    G+LG G     S P  ++ L     +LVACG  HT
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
              T  G +Y WG G+   G LG G   + C  P  +  + D   +S +SCG +HTAVVT
Sbjct: 100 LIATGDGKVYVWGGGS--EGQLGLGEDTTECTEPTLL--DFDSKAIS-VSCGYYHTAVVT 154

Query: 368 SAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
             G+L+TFG+  +G LG  + D  S+  P++V  ++  +   V CG  HT A+  +    
Sbjct: 155 EDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAES---- 209

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD---KEPRLFPECVAPLIDENICQVACGHDLSV 482
                     G ++T+G+G  G+LGHG+   + P   P  V    D +    +CG + + 
Sbjct: 210 ----------GAVYTFGNGASGQLGHGNSLLESPT--PHRVERFRDADCKHASCGENFTA 257

Query: 483 ALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            +T  GH+YT G   +G+LG+      +   P +V     +  V+ VACG  H+  + S
Sbjct: 258 VITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKV-ARFNKFQVQWVACGGCHMMVIAS 315



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 27/240 (11%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           ++CG  HTA+VT  G L+TFG   +G LG G   + S P  V++L+  +   V+CG  HT
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI---DENIC 472
              ++AT             GK++ WG G +G+LG G+       EC  P +   D    
Sbjct: 100 ---LIATGD-----------GKVYVWGGGSEGQLGLGED----TTECTEPTLLDFDSKAI 141

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD---GLVPTRVDGEIAESFVEEVACG 529
            V+CG+  +  +T  G++YT G   YG+LG+  +D      P +V G I E  V+ V CG
Sbjct: 142 SVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTG-IKEK-VKFVVCG 199

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDK-DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             H  A+  +  VYT+G GA+GQLGHG+      +P  V+  +D   K   CG NFTA+I
Sbjct: 200 GGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVI 259



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 121/247 (48%), Gaps = 22/247 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEIL 293
           P  V+S        +ACG  H ++ T  G+++ WG  S G+LG G +  + + P L++  
Sbjct: 78  PSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFD 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S      V+CG YHT  VT  G+LYT+G+  Y    L +    S   P+KV+G  + +  
Sbjct: 138 S--KAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKV-- 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGV 412
            ++ CG  HT  +  +G ++TFG+G+ G LGHG+  + +  P  VE  R       SCG 
Sbjct: 194 KFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGE 253

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDEN 470
             TA +              T  G L+T+GDG  G+LG GD+    +  P  VA      
Sbjct: 254 NFTAVI--------------TGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQ 299

Query: 471 ICQVACG 477
           +  VACG
Sbjct: 300 VQWVACG 306



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 32/290 (11%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYIS 357
           VACG+ HT  VT +G LYT+G   +    LGH    SK SC        +L       ++
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVK------SLKHEKAKLVA 93

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG  HT + T  G ++ +G GS G LG G+  +      +      +   VSCG +HTA 
Sbjct: 94  CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS-KAISVSCGYYHTAV 152

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG--HGDKEPRLFPECVAPLIDENICQVA 475
           V              T  G L+T+G+ + G+LG  + D +    P+ V   I E +  V 
Sbjct: 153 V--------------TEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVT-GIKEKVKFVV 197

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLG--VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           CG   + A+  SG VYT G+ A GQLG    + +   P RV+    ++  +  +CG    
Sbjct: 198 CGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVE-RFRDADCKHASCGENFT 256

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           A +T    +YT+G G +G+LG GD+   N+  P  V      QV+ V CG
Sbjct: 257 AVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           + ++ IC VACG + +  +T +G +YT GS  +GQLG+    G   T       +S   E
Sbjct: 32  IRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQLGL----GHTKTASKPSCVKSLKHE 87

Query: 526 ----VACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTLVDFLKDKQVKRVVC 580
               VACG  H    T   KVY WG G+ GQLG G D      PTL+DF  D +   V C
Sbjct: 88  KAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF--DSKAISVSC 145

Query: 581 GLNFTAII 588
           G   TA++
Sbjct: 146 GYYHTAVV 153


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 167/342 (48%), Gaps = 29/342 (8%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V N++CG  H+ +VT  G+++++G    G+LGHG     + P +++ L    V +VACG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT A T SG LY++G G    G LGHG      +P+ + G LD     +++CG   +A 
Sbjct: 97  NHTIAATESGHLYSFGCG--GDGQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSAA 153

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G L+T+G    G  G G+   T IP  +  L G +   VSCG +H A V       
Sbjct: 154 ITENGELYTWGSCGEGQNGLGE--DTEIPTRLH-LHG-KVRMVSCGYYHMAVV------- 202

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL--IDENICQVACGHDLSVA 483
                  T  G L+  G+ + G+LG  D E       +  +  I++ +   ACG + +  
Sbjct: 203 -------TEDGSLYMCGEKEGGKLGL-DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAV 254

Query: 484 LTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           +T +G VYT G    GQLG+   + +   P R+     +     V+CG    A +T    
Sbjct: 255 VTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITKHGN 313

Query: 542 VYTWGKGANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG GD+   N   P  V    +  VK V CG
Sbjct: 314 LYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 31/306 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+      V+ +ACG  H +  T+ G ++S+G    G+LGHG   D   P++IE L 
Sbjct: 78  PSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLD 137

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
               + +ACG   + A+T +G+LYTWG        LG  ++    IP ++  +L G  + 
Sbjct: 138 VQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDTE----IPTRL--HLHG-KVR 190

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV--SCGV 412
            +SCG +H AVVT  G L+  G+   G LG  DH       +++ ++ +    V  +CG 
Sbjct: 191 MVSCGYYHMAVVTEDGSLYMCGEKEGGKLGL-DHEQLDNTSQLQKIKSIEDQVVVAACGA 249

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENI 471
             TA V              T  G ++T+G G++G+LG G       FPE + PL ++  
Sbjct: 250 EFTAVV--------------TKNGSVYTFGQGNQGQLGLGSSMMETEFPERI-PLFEKVK 294

Query: 472 CQ-VACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVA 527
            + V+CG   +  +T  G++YT G   +G+LG+     ++   P +V        V+ V 
Sbjct: 295 ARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK-RFNNFTVKMVT 353

Query: 528 CGAYHV 533
           CG  H+
Sbjct: 354 CGGCHM 359



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 139/332 (41%), Gaps = 79/332 (23%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V  SG ++T+G   +   L         WI      NL        SCG  H+AVVT+ G
Sbjct: 8   VPESGAVFTFGKTRFADNLAN-----KFWIRDDAVVNL--------SCGDEHSAVVTANG 54

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            L+TFG   +G LGHG+  S + P  V+ L+  +   V+CG  HT A             
Sbjct: 55  KLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIA------------- 101

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
            +T  G L+++G G  G+LGHGD E    P+ +  L  +    +ACG D S A+T +G +
Sbjct: 102 -ATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGEL 160

Query: 491 YTMGSAAYGQLGVPVADGLVPTRV---------------------DGEI----------- 518
           YT GS   GQ G+   D  +PTR+                     DG +           
Sbjct: 161 YTWGSCGEGQNGLG-EDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEKEGGKL 219

Query: 519 ------------------AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
                              E  V   ACGA   A +T    VYT+G+G  GQLG G    
Sbjct: 220 GLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMM 279

Query: 561 RNS-PTLVDFLKDKQVKRVVCGLNFTAIICLH 591
               P  +   +  + + V CG +FTA+I  H
Sbjct: 280 ETEFPERIPLFEKVKARTVSCGESFTAVITKH 311



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 25/267 (9%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           F  GG+ ++G+  +   D+ +PK +E        ++ACG+  +  +T+ GE+++WG    
Sbjct: 111 FGCGGDGQLGHGDAE--DSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGE 168

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           G+ G G + ++  P  + +     V +V+CG YH   VT  G LY  G+       L H 
Sbjct: 169 GQNGLGEDTEI--PTRLHLHG--KVRMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHE 224

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTS 392
              +    +K+    D + ++  +CG   TAVVT  G ++TFG G+ G LG G   + T 
Sbjct: 225 QLDNTSQLQKIKSIEDQVVVA--ACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETE 282

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P  +     ++   VSCG   TA +              T  G L+T+GDG  G+LG G
Sbjct: 283 FPERIPLFEKVKARTVSCGESFTAVI--------------TKHGNLYTFGDGRHGKLGLG 328

Query: 453 DK--EPRLFPECVAPLIDENICQVACG 477
           D+       PE V    +  +  V CG
Sbjct: 329 DECFSNTFKPEKVKRFNNFTVKMVTCG 355


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 188/396 (47%), Gaps = 49/396 (12%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +LS +++ SS  S        G V+ WG+   +G LG G     Y         +P  V+
Sbjct: 273 NLSGIIAISSGNSHSLALKDDGTVWAWGDN-ESGQLGDGTTNSKY---------IPSQVQ 322

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
                 + +I+CG  +++ +   G ++ WG+ + G+LG G   D +    +  L GV   
Sbjct: 323 GLSG--IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIA- 379

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG  H+ A+   G ++TWG   +  G LG G+KVS      +SG LDGI    I+CG
Sbjct: 380 -IACGVNHSMALRNDGTVWTWGFNAF--GQLGDGTKVSKNTAVPISG-LDGIIA--ITCG 433

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +   G ++ +GD  +G LG+G  IS + P +V  L G+++  + CG  ++ +  
Sbjct: 434 TSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKS--IFCG--YSTSFA 489

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           +  D            G ++ WG+ + G LG G     ++P     + D  I  ++ G  
Sbjct: 490 LKPD------------GTVWAWGNNEYGELGKGFTTRVIYPTETLNIGD--IKAISIGSS 535

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVA 534
             +AL   G V+  G   YGQLG    DG      +P +V G    S +  ++ G  H  
Sbjct: 536 HCLALKNDGTVWAWGDNRYGQLG----DGTTTIKSLPVQVSG---ISGITAISAGGSHSL 588

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           AL S   V+ WG+   GQLG G K++RN+P  V  L
Sbjct: 589 ALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSEL 624



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 164/343 (47%), Gaps = 49/343 (14%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ G  H + +   G +++ GE   G+LG+    D++ P  +E L+   V  ++ G+Y++
Sbjct: 180 VSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYS 237

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G ++TWG+  Y  G LG G+  +   P +V  NL GI    IS G  H+  +  
Sbjct: 238 MALKSDGTVWTWGENDY--GQLGDGTTATRLSPVQVQ-NLSGIIA--ISSGNSHSLALKD 292

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G ++ +GD   G LG G   S  IP +V+ L G+    +SCG +++ A+          
Sbjct: 293 DGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGI--VSISCGFYYSMAL---------- 340

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                + G ++ WGD   G+LG G    R     V+ L  + +  +ACG + S+AL   G
Sbjct: 341 ----KNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL--DGVIAIACGVNHSMALRNDG 394

Query: 489 HVYTMGSAAYGQLG----------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            V+T G  A+GQLG          VP++       +DG IA      + CG  H  AL  
Sbjct: 395 TVWTWGFNAFGQLGDGTKVSKNTAVPISG------LDGIIA------ITCGTSHSMALKD 442

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              V+ WG    GQLG+G   +  +P+ V  L    +K + CG
Sbjct: 443 DGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCG 483



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 169/383 (44%), Gaps = 45/383 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG      F   G+   G   S+ T A+    ++  +A     I CG  H++ + 
Sbjct: 394 GTVWTWG------FNAFGQLGDGTKVSKNT-AVPISGLDGIIA-----ITCGTSHSMALK 441

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +++WG+   G+LG+G     + P  +  LSG+  + + CG   + A+   G ++ W
Sbjct: 442 DDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGI--KSIFCGYSTSFALKPDGTVWAW 499

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G+  Y  G LG G       P +    L+   +  IS G  H   + + G ++ +GD  +
Sbjct: 500 GNNEY--GELGKGFTTRVIYPTET---LNIGDIKAISIGSSHCLALKNDGTVWAWGDNRY 554

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G     S+P +V  + G+  T +S G  H+ A+               S G ++ 
Sbjct: 555 GQLGDGTTTIKSLPVQVSGISGI--TAISAGGSHSLAL--------------KSDGTVWA 598

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG  + G+LG G KE R  P  V+ L    I  ++     S AL   G V+  GS +Y  
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSEL--SGITVISNCIYRSFALKNDGTVWVWGSDSYN- 655

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
             +P+    +P ++ G    S +  + CG YH  AL +   V+ WGK   GQ G G    
Sbjct: 656 --LPLEKMTMPIQISGL---SGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTT 710

Query: 561 RNSPTLVDFLKDKQVKRVVCGLN 583
            N P  V  L    VK +  G N
Sbjct: 711 TNIPVQVSGLSG--VKAIAVGGN 731



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 29/312 (9%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +I+ G  +++ +   G +++WGE   G+LG G  A    P  ++ LSG+    ++ G 
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSGIIA--ISSGN 284

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+   G ++ WGD    SG LG G+  S +IP +V G L GI    ISCG +++  
Sbjct: 285 SHSLALKDDGTVWAWGDN--ESGQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMA 339

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           + + G ++ +GD + G LG G     +    V  L G+    ++CGV H+ A+       
Sbjct: 340 LKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGV--IAIACGVNHSMAL------- 390

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                   + G ++TWG    G+LG G K  +     ++ L  + I  + CG   S+AL 
Sbjct: 391 -------RNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALK 441

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G V+  G   YGQLG         P++V      S ++ + CG     AL     V+ 
Sbjct: 442 DDGTVWAWGDNQYGQLGNGTFISNTTPSQVSN---LSGIKSIFCGYSTSFALKPDGTVWA 498

Query: 545 WGKGANGQLGHG 556
           WG    G+LG G
Sbjct: 499 WGNNEYGELGKG 510



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 42/283 (14%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ G  H++ +   G +++WG+ + G+LG G + D + P  +  LSG+ V  ++   Y +
Sbjct: 580 ISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITV--ISNCIYRS 637

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G ++ WG  +YN  L     K++  +P ++SG L GI    I CG +H   + +
Sbjct: 638 FALKNDGTVWVWGSDSYNLPL----EKMT--MPIQISG-LSGIIA--IECGTYHNLALKN 688

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG----------VWHTAAV 418
            G ++ +G  +FG  G G   +T+IP +V  L G++   V             VW    +
Sbjct: 689 DGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRI 748

Query: 419 VVATDSSS-------------------SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           +V+   S+                   S+     + GK+FTWG  D G+LG G    R+ 
Sbjct: 749 LVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVT 808

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
              V+ L  E +  VA     S+ L   G +   G   +GQLG
Sbjct: 809 VAPVSGL--EGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQLG 849



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 176/411 (42%), Gaps = 65/411 (15%)

Query: 183 SVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           ++   +SH  A +D    G V+ WG+    G LG G      +F   T    P  V +  
Sbjct: 429 AITCGTSHSMALKDD---GTVWAWGDN-QYGQLGNG------TFISNT---TPSQVSNLS 475

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
              + +I CG   +  +   G +++WG    G LG G    V +P   E L+  +++ ++
Sbjct: 476 G--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT--ETLNIGDIKAIS 531

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H  A+   G ++ WGD  Y  G LG G+     +P +VSG + GI  + IS G  H
Sbjct: 532 IGSSHCLALKNDGTVWAWGDNRY--GQLGDGTTTIKSLPVQVSG-ISGI--TAISAGGSH 586

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV---- 418
           +  + S G ++ +G  + G LG G     + P +V  L G+  T +S  ++ + A+    
Sbjct: 587 SLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGI--TVISNCIYRSFALKNDG 644

Query: 419 ---VVATDSSS------------SSPSG--STSCGK-----------LFTWGDGDKGRLG 450
              V  +DS +            S  SG  +  CG            ++ WG  + G+ G
Sbjct: 645 TVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFG 704

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
            G       P  V+ L    +  +A G + S+AL + G V+      +G++ V V+   V
Sbjct: 705 DGTTTTTNIPVQVSGL--SGVKAIAVGGNRSIALKSDGTVW-----QWGRILVSVSPSTV 757

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
            T       +   E V+    +  AL +  KV+TWG    GQLG G    R
Sbjct: 758 ETWTTARQVDGLSEIVSIS--NNVALKNDGKVFTWGANDYGQLGDGTTTAR 806



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I CG  H + +   G +++WG+ + G+ G G     + P  +  LSGV  + +A G   +
Sbjct: 676 IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSGV--KAIAVGGNRS 733

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A+   G ++ WG    +       S V  W   R+V G  + + +S       +   + 
Sbjct: 734 IALKSDGTVWQWGRILVSV----SPSTVETWTTARQVDGLSEIVSIS-------NNVALK 782

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G +FT+G   +G LG G   +      V  L G+     S     T ++V+  D    
Sbjct: 783 NDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS----DTTSMVLMND---- 834

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDK 454
                   G +  WG  + G+LG+G++
Sbjct: 835 --------GTIRAWGKNNFGQLGNGER 853



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFV 523
           P I+  I +V+ G   ++AL + G V+  G   YGQLG     D   P  V+G    + V
Sbjct: 171 PKIEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL---NKV 227

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             ++ G Y+  AL S   V+TWG+   GQLG G    R SP  V  L
Sbjct: 228 SSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNL 274


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 171/347 (49%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    + G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--DEGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  D  +  +P +V T  G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTT--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLG------HGDKEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG         + P+L PE     I E + QVACG +
Sbjct: 206 -------TTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            SV LT +  +YT G   +GQLG  +   L  T   RV   I    +  ++CG  H A L
Sbjct: 254 HSVVLTEN-DLYTFGLGKFGQLG--LGTFLFETSEPRVVESIKGRKISYISCGENHAALL 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           T T  +YT+G G +G+LG   ++  N+  P L  +L   +VK V CG
Sbjct: 311 TDTGLMYTFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACG 357



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G    G+LG G   + +   LI   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G     +  +P +V+    G  +
Sbjct: 138 PQHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLPDMPNACVPHQVT---TGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+ FG+   G LG    + ++  IP+ V  +   +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIP-EKVIQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPL 466
             H+   VV T++             L+T+G G  G+LG G       EPR+    V  +
Sbjct: 252 GEHS---VVLTEND------------LYTFGLGKFGQLGLGTFLFETSEPRV----VESI 292

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
               I  ++CG + +  LT +G +YT G   +G+LG+ +    +  +P      + +  V
Sbjct: 293 KGRKISYISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILCS-YLLKYKV 351

Query: 524 EEVACGAYHVAALTS 538
           + VACG  H+    +
Sbjct: 352 KLVACGGCHMVVFAA 366



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 25/186 (13%)

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           +SCG  H+A V              T   KL+ +G  + G+LG G K     P CV  L 
Sbjct: 40  LSCGDEHSAVV--------------TGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALK 85

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----- 522
            E +   ACG + ++  T  G+VY  G    GQLG+    G    R    +   F     
Sbjct: 86  PEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGL----GDTEERTTFHLISFFTPQHK 141

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           +++++ G+   AALT   +++ WG  + GQ+G  D  N   P  V     K V  + CG 
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQV--TTGKPVSWISCGY 199

Query: 583 NFTAII 588
             +A +
Sbjct: 200 YHSAFV 205


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 141/273 (51%), Gaps = 18/273 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEIL 293
           P+ V +  A  +  ++CG  H++ V +QG++F+WG   GG+LG G  E  V  P+LI+ L
Sbjct: 75  PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKL 134

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               +  V CG +H  A+++ G L+ WG+ +  SG LG G      +  +   +L GI L
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENS--SGQLGLGKGEPSTLSPQPLKSLCGIPL 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + IS G  H+  ++ +G +F +G  S G LG  D    ++P  ++ LR  +   +SCG  
Sbjct: 193 TQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           HTAA+              T  G LFT+G+G KG+LGH        P  V  L+   + Q
Sbjct: 253 HTAAL--------------TKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQ 298

Query: 474 VACGHDLSVALTTS-GHVYTMGSAAYGQLGVPV 505
           +ACG + ++A   S G +Y  G    GQLG  +
Sbjct: 299 IACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGI 331



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 166/326 (50%), Gaps = 24/326 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  +ACG +H++ +   G +++ G  S G+LGH +    S P+L+  L    +  V+CG+
Sbjct: 36  LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGG--SRPELVGALDAQKISGVSCGQ 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ AV   G ++ WG G  + G LG G+ + +  +PR +   L    +S + CG  H  
Sbjct: 94  AHSLAVNEQGQVFAWGAG--DGGQLGLGTAEEAVRVPRLIK-KLCEHRISQVMCGNHHCI 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++  G LF +G+ S G LG G    ST  P+ +++L G+  T++S G  H+ A+  +  
Sbjct: 151 ALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G +F WG    G+LG  D++ R  P  +  L  + +  ++CG + + A
Sbjct: 209 ------------GAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAA 256

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSK 541
           LT  G ++T G+ + GQLG     +  +P RV  E+  + V ++ACG  H  A   ST  
Sbjct: 257 LTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRV-MELMGTEVSQIACGRNHTLAFVPSTGL 315

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLV 567
           +Y +G    GQLG G + +  SP  V
Sbjct: 316 IYAFGCNTQGQLGTGIRGSAKSPVPV 341



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 158/328 (48%), Gaps = 30/328 (9%)

Query: 265 IFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG    G+LG G  EA V  P+   +  G  ++ VACG  H+  +   G +YT G  
Sbjct: 2   MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61

Query: 324 TYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           +   G LGH   GS+     P  V G LD   +S +SCG  H+  V   G +F +G G  
Sbjct: 62  S--CGQLGHDKGGSR-----PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDG 113

Query: 381 GALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           G LG G    +  +PR ++ L   R ++V CG  H  A+              +  G+LF
Sbjct: 114 GQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIAL--------------SKDGQLF 159

Query: 440 TWGDGDKGRLGHGDKEPR-LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
            WG+   G+LG G  EP  L P+ +  L    + Q++ G D S AL+ SG V+  G  + 
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219

Query: 499 GQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+    D  VP  +    ++  V  ++CG  H AALT    ++T+G G+ GQLGH  
Sbjct: 220 GQLGLNDEQDRAVPCHIKFLRSQKVVY-ISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
             N   P  V  L   +V ++ CG N T
Sbjct: 279 TRNEPLPRRVMELMGTEVSQIACGRNHT 306



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 27/270 (10%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           +S  S G AH    +  G VF WG G       GG+  +G   + +    +P+ ++    
Sbjct: 86  ISGVSCGQAHSLAVNEQGQVFAWGAG------DGGQLGLG---TAEEAVRVPRLIKKLCE 136

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVA 302
             +  + CG  H + ++K G++F WGE S G+LG G+ E     PQ ++ L G+ +  ++
Sbjct: 137 HRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQIS 196

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ A++ SG ++ WG  +  +G LG   +    +P  +   L    + YISCG  H
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNS--AGQLGLNDEQDRAVPCHIK-FLRSQKVVYISCGEEH 253

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TA +T  G LFTFG+GS G LGH    +  +PR V  L G   ++++CG  HT A V +T
Sbjct: 254 TAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPST 313

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
                        G ++ +G   +G+LG G
Sbjct: 314 -------------GLIYAFGCNTQGQLGTG 330



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 26/272 (9%)

Query: 323 GTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           G+  +G LG G S+ S + PR      DG  L  ++CG  H+  +   G ++T G  S G
Sbjct: 6   GSSGAGQLGIGASEASVFEPRSCC-VFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGH      S P  V  L   + + VSCG  H+ AV                 G++F W
Sbjct: 65  QLGHDK--GGSRPELVGALDAQKISGVSCGQAHSLAV--------------NEQGQVFAW 108

Query: 442 GDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G GD G+LG G  E  +  P  +  L +  I QV CG+   +AL+  G ++  G  + GQ
Sbjct: 109 GAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQ 168

Query: 501 LGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           LG+   +   P+ +  +  +S     + +++ G  H  AL+ +  V+ WGK + GQLG  
Sbjct: 169 LGLGKGE---PSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLN 225

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           D+ +R  P  + FL+ ++V  + CG   TA +
Sbjct: 226 DEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 13/204 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WGE  ++G LG G+         +   L P+ ++S   + +  I+ G  H+  ++
Sbjct: 156 GQLFVWGEN-SSGQLGLGK--------GEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +F WG+ S G+LG   E D + P  I+ L    V  ++CGE HT A+T+ G L+T+
Sbjct: 207 FSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G+G+   G LGH S  +  +PR+V   L G  +S I+CG  HT A V S G ++ FG  +
Sbjct: 267 GNGS--KGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNT 323

Query: 380 FGALGHGDHISTSIPREVETLRGL 403
            G LG G   S   P  V  ++ L
Sbjct: 324 QGQLGTGIRGSAKSPVPVSNIQPL 347


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 24/327 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V+ IACG RH + +T  G++++ G     +LGH  E     P  I  L    +  +ACG 
Sbjct: 38  VNQIACGHRHTLFLTASGKVYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGS 95

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A+T  G + +WGD     G LGH S +    +P+ V   L    +  I+CG  H+ 
Sbjct: 96  RHSMALTEWGQVLSWGDN--ECGQLGHASDQDVVQLPKTVRA-LVSKTVVQIACGNNHSL 152

Query: 365 VVTSAGHLFTFGDGSFGALG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +T  G L+ +G   +G LG     +    + P  + TL G+    ++CG  H+  +   
Sbjct: 153 ALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLI--- 209

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
             S SS+         +F WG  + G+LG  D+  R +P  +  L    +  VACG + S
Sbjct: 210 --SKSSA---------VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFS 258

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STS 540
           V LT  G V+T G+ AYGQLG       +  R+  E+  S + +VACG  H  A+  +  
Sbjct: 259 VFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARG 318

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLV 567
           ++Y +G G++GQLG  +  + N P +V
Sbjct: 319 RIYGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 23/278 (8%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +LY WG+ ++    LG         P K+    D   ++ I+CG  HT  +T++G ++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSA-VNQIACGHRHTLFLTASGKVYAC 60

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +  LGH   +S+  P ++  L     T+++CG  H+ A+              T  
Sbjct: 61  GSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMAL--------------TEW 104

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G++ +WGD + G+LGH  D++    P+ V  L+ + + Q+ACG++ S+ALT  G +Y  G
Sbjct: 105 GQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWG 164

Query: 495 SAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           S  YGQLGV     L     P  +   +    V  +ACG  H   ++ +S V+ WG+   
Sbjct: 165 SNIYGQLGVKTPSELGQCNAPMLLTTLLGIP-VRAIACGGNHSFLISKSSAVFGWGRNNC 223

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG  D+ NR  PT +  L+   V+ V CG  F+  +
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 151/327 (46%), Gaps = 31/327 (9%)

Query: 264 EIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           E++ WG  S G+LG G   +  +  P  +       V  +ACG  HT  +T SG +Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              Y    LGH  ++S   P ++   +D + ++ I+CG  H+  +T  G + ++GD   G
Sbjct: 62  SNDYAQ--LGH--ELSSKRPLQIPELVDCV-ITQIACGSRHSMALTEWGQVLSWGDNECG 116

Query: 382 ALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LGH  D     +P+ V  L      +++CG  H+ A+              T CG+L+ 
Sbjct: 117 QLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLAL--------------TCCGELYA 162

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVACGHDLSVALTTSGHVYTMGS 495
           WG    G+LG   K P    +C AP++   +       +ACG + S  ++ S  V+  G 
Sbjct: 163 WGSNIYGQLG--VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGR 220

Query: 496 AAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              GQLG+    +   PT++   +    V  VACG      LT+   V+T G GA GQLG
Sbjct: 221 NNCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 279

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           HG   N   P +V  L    + +V CG
Sbjct: 280 HGFCGNEMLPRMVMELMGSTISQVACG 306



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 138/284 (48%), Gaps = 29/284 (10%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           V++  + GS H       G V  WG+    G LG          S Q    LPK V + +
Sbjct: 87  VITQIACGSRHSMALTEWGQVLSWGDN-ECGQLGHA--------SDQDVVQLPKTVRALV 137

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH---PQLIEILSGVNVE 299
           +  V  IACG  H++ +T  GE+++WG    G+LG    +++     P L+  L G+ V 
Sbjct: 138 SKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVR 197

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG  H+  +++S  ++ WG    N G LG   + +   P ++   L  + + +++CG
Sbjct: 198 AIACGGNHSFLISKSSAVFGWGRN--NCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACG 254

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              +  +T+ G +FT G G++G LGHG   +  +PR V  L G   ++V+CG  HT A+V
Sbjct: 255 DEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMV 314

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
            A              G+++ +G G  G+LG  + +    P+ V
Sbjct: 315 PAR-------------GRIYGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 12/231 (5%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFS 227
           D     +T R  +S  V   + G+ H       G+++ WG  I           +G    
Sbjct: 125 DVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELG---- 180

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
            Q +A  P  + + + + V  IACG  H+ L++K   +F WG  + G+LG   E + ++P
Sbjct: 181 -QCNA--PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP 237

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
             ++ L  + V  VACG+  +  +T  G ++T G G Y  G LGHG   +  +PR V   
Sbjct: 238 TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY--GQLGHGFCGNEMLPRMVM-E 294

Query: 348 LDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           L G  +S ++CG  HT A+V + G ++ FG GS G LG  +  S ++P+ V
Sbjct: 295 LMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 17/249 (6%)

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G   +G LG G+     +P+K+    +GI +  ++ G  HTA VT  G LF +G G +G 
Sbjct: 2   GRNQNGQLGLGTTEDSLVPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LG GD     +P++V ++ G +   V+CG  HT +V              +S G L+T+G
Sbjct: 61  LGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--------------SSLGGLYTYG 106

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
               G+LGHGD E RL P  +  L  +NI Q++ G   ++ALTT G +Y  G   +GQ+G
Sbjct: 107 WSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVG 166

Query: 503 V-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
                D   P ++     +  ++ ++CG  H  A+T    V++WG+G NGQLGHG+  +R
Sbjct: 167 AGDNIDHCSPIQIKFPQDQKVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDR 225

Query: 562 NSPTLVDFL 570
           N+P +++ L
Sbjct: 226 NTPMILEAL 234



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 123/236 (52%), Gaps = 17/236 (7%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D+L+P+ +++   + +  +A GA H   VT+ GE+F WG    G LG G   D   PQ +
Sbjct: 16  DSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKV 75

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
             + G  + +VACG  HT +V+  G LYT+G   Y  G LGHG      +P ++   L G
Sbjct: 76  SSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKY--GQLGHGDFEDRLVPHRLEA-LRG 132

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
            ++S IS G  HT  +T+ G L+ +G   FG +G GD+I    P +++  +  +  ++SC
Sbjct: 133 DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISC 192

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           G  HT AV   TD  +           +F+WG G  G+LGHG+   R  P  +  L
Sbjct: 193 GWRHTLAV---TDKQN-----------VFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 16/215 (7%)

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G    G LG G    + +P++++   G+    V+ G  HTAAV              T 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV--------------TE 46

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G+LF WG G  G LG GD+  RL P+ V+ +  + +  VACG   ++++++ G +YT G
Sbjct: 47  DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYG 106

Query: 495 SAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            + YGQLG     D LVP R++    ++ + +++ G  H  ALT+  K+Y WG    GQ+
Sbjct: 107 WSKYGQLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDGKLYGWGWNKFGQV 165

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G GD  +  SP  + F +D++V ++ CG   T  +
Sbjct: 166 GAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 200



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  ++      V  I+CG RH + VT +  +FSWG  + G+LGHG   D + P ++E LS
Sbjct: 176 PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 235


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 189/403 (46%), Gaps = 60/403 (14%)

Query: 215 LGGGEHRVGYSFS--RQTDALL----------PKAVESTMALDVHNIACGARHAVLVTKQ 262
             G + ++ Y F+  R  D  L          PKAV+      V  I+ G+ H+ +VT+ 
Sbjct: 7   FAGDDQQITYLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQD 66

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQ--LIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G++F  G    G+LG       S+P+  L++ + G+ V  VA G+YHT  +  +G +Y W
Sbjct: 67  GQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAW 126

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG-- 378
           G GT +  L   GSK     P ++      I    I CG +H+A +++ G L+T+G G  
Sbjct: 127 G-GTLHKKL---GSKAGK--PARIETLKQTI--VQIGCGDFHSAALSANGDLYTWGGGGR 178

Query: 379 --SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             + G LGHG       P+ V+        + SCG +H  A+                 G
Sbjct: 179 DYNRGQLGHGHLNDVETPQIVKD----NIVKFSCGGYHMMAL--------------DKDG 220

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAP-------LIDE---------NICQVACGHDL 480
           +L++WG G  G  G G+ +  L P+ V         +ID+          I +++ G   
Sbjct: 221 ELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHH 280

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           S+ L+  G VY  G A +GQLG+   +     ++   I+   + ++A G  H   LTS S
Sbjct: 281 SLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHS 340

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            VYT G    GQLG GD ++R   T ++FL+ +++K++  G N
Sbjct: 341 DVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGN 383



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 46/357 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +F+WG    G L  G +   + P+ ++ L    V+L++ G  H+  VT+ G L+  G   
Sbjct: 17  LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSAL 76

Query: 325 YNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +  G LG         P+  +   + G+ ++ ++ G +HT  +   G ++ +G      L
Sbjct: 77  H--GKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           G         P  +ETL+     ++ CG +H+AA+              ++ G L+TWG 
Sbjct: 135 GS----KAGKPARIETLKQ-TIVQIGCGDFHSAAL--------------SANGDLYTWGG 175

Query: 444 G----DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           G    ++G+LGHG       P+ V     +NI + +CG    +AL   G +++ GS  YG
Sbjct: 176 GGRDYNRGQLGHGHLNDVETPQIVK----DNIVKFSCGGYHMMALDKDGELWSWGSGMYG 231

Query: 500 QLGV-PVADGLVPTRVDGEI---------------AESFVEEVACGAYHVAALTSTSKVY 543
           + G     D L+P +V                    ES ++E++ G +H   L++   VY
Sbjct: 232 ETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVY 291

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHS 600
             G   +GQLG    +N+N   LV  +  K + ++  G N + ++  H  V +  H+
Sbjct: 292 ACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHN 348


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 24/340 (7%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI-E 291
           L P  V  T    +  +ACG RH + +T  G +++ G     +LGH  +     P LI E
Sbjct: 29  LTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLGH--DLPTKRPLLIPE 86

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
           +L  V V+ +ACG  H+ A++  G + +WGD   + G LG  +        K+   L   
Sbjct: 87  LLDYVVVQ-IACGSRHSMALSEWGQVLSWGDN--DCGQLGQATDQDIVQLPKIVRQLVSK 143

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTTRV 408
            +  I+CG  H+  +TS G L+++G   +G LG     +   ++ P  + TL G+    +
Sbjct: 144 TVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAI 203

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           +CG  H+  +     S SS+         +F WG  + G+LG  D+  R +P  +  L  
Sbjct: 204 ACGGNHSFII-----SKSSA---------VFGWGRNNCGQLGLNDETSRSYPTQLKTLRT 249

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVAC 528
             +  VACG + SV LT  G V+T G+ AYGQLG       +  R+  E+  S + +VAC
Sbjct: 250 LGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVAC 309

Query: 529 GAYHVAALT-STSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           G  H  AL  S  +VY +G G++GQLG     +   P +V
Sbjct: 310 GNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 23/283 (8%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           +T   +LY WG+ ++    LG         P +V    D   +  ++CG  HT  +TS+G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSA-IKQVACGHRHTLFLTSSG 59

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            ++  G      LGH   + T  P  +  L      +++CG  H+ A+            
Sbjct: 60  RVYACGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMAL------------ 105

Query: 431 GSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
             +  G++ +WGD D G+LG   D++    P+ V  L+ + + Q+ACG++ S+ALT+ G 
Sbjct: 106 --SEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGE 163

Query: 490 VYTMGSAAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           +Y+ GS  YGQLGV     V     P R+   +    V  +ACG  H   ++ +S V+ W
Sbjct: 164 LYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIP-VAAIACGGNHSFIISKSSAVFGW 222

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G+   GQLG  D+ +R+ PT +  L+   V+ V CG  F+  +
Sbjct: 223 GRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 151/337 (44%), Gaps = 41/337 (12%)

Query: 259 VTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           +T   E++ WG  S G+LG G   +  +  P  +       ++ VACG  HT  +T SG 
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 317 LYTWGDGTYNSGLLGHG--SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           +Y  G   ++   LGH   +K    IP      LD + +  I+CG  H+  ++  G + +
Sbjct: 61  VYACGSNDHSQ--LGHDLPTKRPLLIPEL----LDYVVVQ-IACGSRHSMALSEWGQVLS 113

Query: 375 FGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +GD   G LG   D     +P+ V  L      +++CG  H+ A+              T
Sbjct: 114 WGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLAL--------------T 159

Query: 434 SCGKLFTWGDGDKGRLG--------HGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
           SCG+L++WG    G+LG        H ++  RL       L+   +  +ACG + S  ++
Sbjct: 160 SCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRL-----TTLLGIPVAAIACGGNHSFIIS 214

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            S  V+  G    GQLG+        PT++   +    V  VACG      LT+   V+T
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFT 273

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G GA GQLGHG   N   P +V  L    + +V CG
Sbjct: 274 CGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACG 310


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 175/382 (45%), Gaps = 32/382 (8%)

Query: 204 FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
           F WG+  ++G LG G        S   D  LP     T       +  G  H++ +T  G
Sbjct: 59  FAWGDN-SDGQLGNGTT---TGSSTPVDVYLPAGTTITA------VTAGGLHSLALTSTG 108

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            + +WG    G+LG+G   + S P  +++ +G  +  +A G +H+ A+T +G +  WG+ 
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGEN 168

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            +  G LG+G   +   P  VS    G+ ++ ++ G +H+  VTS G +  +GD S G L
Sbjct: 169 LH--GQLGNGGTTNMSTPVGVS-LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQL 225

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVW---HTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G+G    +S P +V+   G   T V+ GV    H+ A+              TS G    
Sbjct: 226 GNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLAL--------------TSTGAALA 271

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG+   G+LG+GD   R  P  V       I  VA G   S+ALT +G V   G    GQ
Sbjct: 272 WGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQ 331

Query: 501 LGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG     G   P  VD     + +  +A G     ALT+   V  WG+  +GQLG+GD  
Sbjct: 332 LGNGTTTGSSTPVDVDLPTGAT-INAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTI 390

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           NR++P  VD      +  V  G
Sbjct: 391 NRSTPVDVDLPAGVTITAVAAG 412



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 162/360 (45%), Gaps = 35/360 (9%)

Query: 183 SVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           + +++ + G  H     S G V  WG    +G LG G+     + +R T    P  V+  
Sbjct: 89  TTITAVTAGGLHSLALTSTGAVLAWGRNF-SGQLGNGD-----TTNRST----PVDVDLP 138

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
               +  IA GA H++ +T  G + +WGE   G+LG+G   ++S P  + + +GV +  V
Sbjct: 139 AGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAV 198

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV--SGNLDGIHLSYISCG 359
           A G +H+ AVT +G +  WGD   ++G LG+G+      P  V          ++    G
Sbjct: 199 AAGAFHSLAVTSTGAVLAWGD--NSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAG 256

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +TS G    +G+ + G LG+GD  + S P +V+   G+  T V+ G  H+ A+ 
Sbjct: 257 AAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLAL- 315

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        T+ G +  WG    G+LG+G       P  V       I  +A G D
Sbjct: 316 -------------TAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFD 362

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAAL 536
             +ALTT+G V   G    GQLG    D +    P  VD   A   +  VA G  H  AL
Sbjct: 363 FGLALTTAGAVVAWGRNVSGQLG--NGDTINRSTPVDVD-LPAGVTITAVAAGGQHSMAL 419



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 131/301 (43%), Gaps = 25/301 (8%)

Query: 301 VACGEYHTCAVTRSGDLY-TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           +A  E    A  R+ D Y  WGD   + G LG+G+      P  V     G  ++ ++ G
Sbjct: 41  LAAAENGPSAAIRASDTYFAWGD--NSDGQLGNGTTTGSSTPVDVY-LPAGTTITAVTAG 97

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +TS G +  +G    G LG+GD  + S P +V+   G   T ++ G +H+ A+ 
Sbjct: 98  GLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLAL- 156

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        TS G +  WG+   G+LG+G       P  V+      I  VA G  
Sbjct: 157 -------------TSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAF 203

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY--HVAAL 536
            S+A+T++G V   G  + GQLG     G   P  VD     +     A  A   H  AL
Sbjct: 204 HSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLAL 263

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHK 592
           TST     WG  A+GQLG+GD  NR++P  VD      +  V  G    L  TA   +  
Sbjct: 264 TSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVA 323

Query: 593 W 593
           W
Sbjct: 324 W 324



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 15/250 (6%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +++++V + + H  A     S G V  WG+  +NG LG G        S   D  LP   
Sbjct: 193 VTITAVAAGAFHSLA---VTSTGAVLAWGDN-SNGQLGNGTT---TGSSTPVDVDLPAGT 245

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
             T        A    H++ +T  G   +WG  + G+LG+G   + S P  +++ +GV +
Sbjct: 246 TITAVAAGVAGAA---HSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTI 302

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYIS 357
             VA G  H+ A+T +G +  WG     SG LG+G+      P  V  +L  G  ++ I+
Sbjct: 303 TAVAAGGLHSLALTAAGAVVAWGRNV--SGQLGNGTTTGSSTPVDV--DLPTGATINAIA 358

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G      +T+AG +  +G    G LG+GD I+ S P +V+   G+  T V+ G  H+ A
Sbjct: 359 AGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMA 418

Query: 418 VVVATDSSSS 427
           +V    S+++
Sbjct: 419 LVALPTSTTT 428


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 183/384 (47%), Gaps = 34/384 (8%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV+ WG   ++     G  ++          + PK V+S    +   +  G      V+ 
Sbjct: 285 DVYAWGSNSSHQLAELGSDKI----------VFPKKVKSFG--NSQMLEAGQYCTFAVSG 332

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG---EYHTCAVTRSGDLY 318
            G + S G+ S GRLG G   + S  + I       +  ++     + HT A+T  G ++
Sbjct: 333 DGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIF 392

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WGDG Y  G LGHGS ++   P+ + G L    +  +S G  H+A VT  G LFT+G+G
Sbjct: 393 SWGDGDY--GKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEG 450

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            +G LG GD+ S ++P  V+ +       V CG  HT  +V+A D  +           +
Sbjct: 451 DYGRLGLGDNTSRNVPVLVKDIAS--AGSVVCGSSHT--LVLAQDGLT-----------V 495

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +++G GD G+LGHGD      P+ +  +      ++  G   S+AL  SG V++ G  A 
Sbjct: 496 WSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGAC 555

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
              G P A  + PT +D E+  + V ++  G  H  ALT  ++VY WG  A GQ G G  
Sbjct: 556 LGCGSPDATFMKPTLID-ELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHT 614

Query: 559 DNRNS-PTLVDFLKDKQVKRVVCG 581
           ++  S PT V  L +  + ++  G
Sbjct: 615 NSPISVPTQVQQLNNVTIHQISAG 638



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 43/322 (13%)

Query: 301 VACGEYHTCAVTRSG-DLYTWG-DGTYNSGLLGHGSKVSCWIPRKVS--GNLDGIHLSYI 356
           ++C E  T +V  +  D+Y WG + ++    LG    V    P+KV   GN        +
Sbjct: 269 ISCTETATKSVDMNNCDVYAWGSNSSHQLAELGSDKIV---FPKKVKSFGNSQ-----ML 320

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV-----ETLRGLRTTRVSCG 411
             G + T  V+  G + + G GS+G LG GD  + S  + +     +T+R + +++ S G
Sbjct: 321 EAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDG 380

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDEN 470
             HT A+              T+ G +F+WGDGD G+LGHG       P+ +  PL    
Sbjct: 381 --HTLAL--------------TTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRI 424

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVA 527
           +  V+ G+  S  +T  G ++T G   YG+LG+   D     VP  V  +IA +    V 
Sbjct: 425 VVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGL--GDNTSRNVPVLVK-DIASA--GSVV 479

Query: 528 CGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           CG+ H   L      V+++G G NG+LGHGD      P +++ +      ++  G  ++ 
Sbjct: 480 CGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSL 539

Query: 587 IICLHKWVSSVDHSVCSSCHNP 608
            +     V S     C  C +P
Sbjct: 540 ALNDSGQVFSWGCGACLGCGSP 561


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 21/298 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+  E      V ++ CG +H V +   G +++ G    G+LGH  E     P+ +  L 
Sbjct: 25  PRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKSRKKPEHVVALD 82

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSGNLDGIHL 353
              +  V+CGE HT A+   G +++WG G+  +G LG  +   C  +PR +   L  + +
Sbjct: 83  AQIIVAVSCGESHTLALNDKGQVFSWGLGS--NGQLGLNNFEECVRVPRNIKC-LSDVQI 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGV 412
           + ++CG WH+  ++  G +F++G   FG LG G H  S S P+ +++L+G+   ++S G 
Sbjct: 140 AQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGG 199

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ A+ ++              G +F WG    G+LG  D + R FP  +  L  + + 
Sbjct: 200 AHSFAITLS--------------GAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVI 245

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
            V+CG D + ALT    V+T G+  YGQLG    +  +  R   E+  + V +++CG+
Sbjct: 246 FVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCGS 303



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 150/322 (46%), Gaps = 25/322 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +  WG  S G+LG G   E  V  P+  E   G  V  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCG- 59

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
              + G LGH  + S   P  V   LD   +  +SCG  HT  +   G +F++G GS G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEHVVA-LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQ 115

Query: 383 LGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG  +      +PR ++ L  ++  +V+CG WH+ A+              +  G++F+W
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL--------------SKGGQVFSW 161

Query: 442 GDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G     +  P+ +  L      Q++ G   S A+T SG V+  G   +GQ
Sbjct: 162 GQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQ 221

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    D   P  +    ++  +  V+CG  H AALT    V+T+G G  GQLGH   +
Sbjct: 222 LGLNDTKDRWFPALLKSLRSQRVIF-VSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTN 280

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
           +  +P  V  L    V ++ CG
Sbjct: 281 HEINPRKVFELMGNVVTQISCG 302



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 14/232 (6%)

Query: 182 SSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + ++ + S G +H    +  G VF WG G +NG LG            +    +P+ ++ 
Sbjct: 83  AQIIVAVSCGESHTLALNDKGQVFSWGLG-SNGQLGLNNF--------EECVRVPRNIKC 133

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVE 299
              + +  +ACG  H+  ++K G++FSWG+   G+LG G   + +S PQ+I+ L G+   
Sbjct: 134 LSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFA 193

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++ G  H+ A+T SG ++ WG   +  G LG       W P  +  +L    + ++SCG
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGKNKF--GQLGLNDTKDRWFPALLK-SLRSQRVIFVSCG 250

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
             HTA +T    +FTFG G +G LGH        PR+V  L G   T++SCG
Sbjct: 251 EDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 136/309 (44%), Gaps = 34/309 (11%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG+ +Y    LG   +     PRK      G  +  + CGL HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEF-FHGKRVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LGH    S   P  V  L       VSCG  HT A+                 G
Sbjct: 60  CNDLGQLGHEK--SRKKPEHVVALDAQIIVAVSCGESHTLAL--------------NDKG 103

Query: 437 KLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++F+WG G  G+LG  + E  +  P  +  L D  I QVACG+  S AL+  G V++ G 
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQ 163

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANG 551
             +GQLG+ +    + T    +I +S       +++ G  H  A+T +  V+ WGK   G
Sbjct: 164 NQFGQLGLGMHGSSISTP---QIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFG 220

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGF 611
           QLG  D  +R  P L+  L+ ++V  V CG + TA +   + V +             G+
Sbjct: 221 QLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG---------GY 271

Query: 612 RRKRHNCYN 620
            +  HNC N
Sbjct: 272 GQLGHNCTN 280


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 134/390 (34%), Positives = 184/390 (47%), Gaps = 44/390 (11%)

Query: 181 LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIAN-GFLGGGEHRVGYSFSRQTDALLPKAV 238
           L S V++ + G  H     S G V+ WG  + N G LG G           TD+  P AV
Sbjct: 409 LPSGVTAIAAGGLHTCALMSSGGVWCWG--LNNSGQLGDGS---------DTDSSTPVAV 457

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            S +A  V  IA G  H   +T  G ++ WG  + G+LG G       P  +  L    V
Sbjct: 458 -SGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP-SGV 515

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             +A G+YHTCA+T SG ++ WG   YN SG LG G+      P  VSG   G+ +  I+
Sbjct: 516 TAIAAGDYHTCALTGSGGVWCWG---YNLSGQLGDGTTTDRSTPVAVSGLTSGVTV--IA 570

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G +HT  +TS+G ++ +G    G LG G   + + P  V  L     T ++ G WHT A
Sbjct: 571 AGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLP-SGVTAIAAGGWHTCA 629

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +              TS G+++ WGD   G+LG G    R  P  V+ L    +  +A G
Sbjct: 630 L--------------TSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAG 674

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIA--ESFVEEVACGAYHVA 534
            + + ALT+SG V+  G   YGQLG    DG    R   G ++   S V  +A G YH  
Sbjct: 675 WEHTCALTSSGEVWCWGDNYYGQLG----DGTTTNRSTPGAVSGLPSGVTAIAAGVYHTC 730

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
           ALT +  V  WG   +GQLG G    R +P
Sbjct: 731 ALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 168/360 (46%), Gaps = 27/360 (7%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD+  P AV S +   V  IA G  H   +T  GE++ WG    G+LG G     S P  
Sbjct: 296 TDSSTPVAV-SGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAA 354

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +  L    VE +A G+YHTCA+  SG ++ WG    NSG LG G+  +   P  VSG   
Sbjct: 355 VSGLP-SGVETIAAGDYHTCALMSSGGVWCWGR--NNSGQLGDGTTTARSTPAAVSGLPS 411

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-RGLRTTRV 408
           G+  + I+ G  HT  + S+G ++ +G  + G LG G    +S P  V  L  G+ T  +
Sbjct: 412 GV--TAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVET--I 467

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           + G WHT A+              TS G ++ WG  + G+LG G     + P  V+ L  
Sbjct: 468 AAGGWHTCAL--------------TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL-P 512

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVA 527
             +  +A G   + ALT SG V+  G    GQLG     D   P  V G    S V  +A
Sbjct: 513 SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGL--TSGVTVIA 570

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
            G +H  ALTS+  V+ WG   +GQLG G   NR +P  V  L          G +  A+
Sbjct: 571 AGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCAL 630



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 190/432 (43%), Gaps = 51/432 (11%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           + +D  S+       L S V++ + G  H       G+V+ WG    NGF   G+   G 
Sbjct: 292 DGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWG---GNGF---GQLGDGT 345

Query: 225 SFSRQTDAL---LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           + +R T A    LP  VE+  A D H  A        +   G ++ WG  + G+LG G  
Sbjct: 346 TTARSTPAAVSGLPSGVETIAAGDYHTCA--------LMSSGGVWCWGRNNSGQLGDGTT 397

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
              S P  +  L    V  +A G  HTCA+  SG ++ WG    NSG LG GS      P
Sbjct: 398 TARSTPAAVSGLP-SGVTAIAAGGLHTCALMSSGGVWCWG--LNNSGQLGDGSDTDSSTP 454

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
             VSG   G+    I+ G WHT  +TS+G ++ +G  + G LG G  I    P  V  L 
Sbjct: 455 VAVSGLASGVET--IAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP 512

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE 461
               T ++ G +HT A+              T  G ++ WG    G+LG G    R  P 
Sbjct: 513 -SGVTAIAAGDYHTCAL--------------TGSGGVWCWGYNLSGQLGDGTTTDRSTPV 557

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-----PTRVDG 516
            V+ L    +  +A G   + ALT+SG V+  G+   GQLG    DG       P  V G
Sbjct: 558 AVSGLT-SGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLG----DGTTTNRTTPVAVSG 612

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
               S V  +A G +H  ALTS+ +V+ WG    GQLG G   NR++P  V  L    V 
Sbjct: 613 L--PSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VT 669

Query: 577 RVVCGLNFTAII 588
            +  G   T  +
Sbjct: 670 AIAAGWEHTCAL 681



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 183/393 (46%), Gaps = 40/393 (10%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V+ WG   +      G+   G + +R T    P AV S +   V  IA G  H   
Sbjct: 377 SSGGVWCWGRNNS------GQLGDGTTTARST----PAAV-SGLPSGVTAIAAGGLHTCA 425

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +   G ++ WG  + G+LG G + D S P  +  L+   VE +A G +HTCA+T SG ++
Sbjct: 426 LMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGGWHTCALTSSGGVW 484

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG    NSG LG GS +    P  VSG   G+  + I+ G +HT  +T +G ++ +G  
Sbjct: 485 CWGR--NNSGQLGDGSTIYHITPVAVSGLPSGV--TAIAAGDYHTCALTGSGGVWCWGYN 540

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LG G     S P  V  L     T ++ G +HT A+              TS G +
Sbjct: 541 LSGQLGDGTTTDRSTPVAVSGLT-SGVTVIAAGRFHTCAL--------------TSSGGV 585

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           + WG    G+LG G    R  P  V+ L    +  +A G   + ALT+SG V+  G   Y
Sbjct: 586 WCWGANFDGQLGDGTTTNRTTPVAVSGL-PSGVTAIAAGGWHTCALTSSGEVWCWGDNYY 644

Query: 499 GQLGVPVADGLVPTR-VDGEIA--ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
           GQLG    DG    R   G ++   S V  +A G  H  ALTS+ +V+ WG    GQLG 
Sbjct: 645 GQLG----DGTTTNRSTPGAVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGD 700

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G   NR++P  V  L    V  +  G+  T  +
Sbjct: 701 GTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCAL 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 182/412 (44%), Gaps = 47/412 (11%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V++ + G AH       G V  WG    N F   G+   G   +R T    P AV S + 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWG---GNDF---GQLGDGTPTTRST----PGAV-SGLP 103

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V  IA G  H   +T  G +  WG    G+LG+G     S P  +  L    V  +A 
Sbjct: 104 SGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLP-SGVTAIAA 162

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HTCA+  SG +  WGD  Y  G LG G+  +   P  VSG   G+  + I+ G  HT
Sbjct: 163 GGDHTCALMSSGGVMCWGDNYY--GQLGDGTTTNRRTPVAVSGLPSGV--TAIAAGGLHT 218

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETL-RGLRTTRVSCGVWHTAAVVVA 421
             +T +G ++ +G   +G LG G    S S P  V  L  G+  T ++ G  HT A++  
Sbjct: 219 CALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGM--TAIAAGGLHTCALM-- 274

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                       S G ++ WG  D G+LG G       P  V+ L    +  +A G   +
Sbjct: 275 ------------SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL-PSGVTAIAAGDYHT 321

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAAL 536
            ALT SG V+  G   +GQLG    DG       P  V G    S VE +A G YH  AL
Sbjct: 322 CALTGSGEVWCWGGNGFGQLG----DGTTTARSTPAAVSGL--PSGVETIAAGDYHTCAL 375

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            S+  V+ WG+  +GQLG G    R++P  V  L          GL+  A++
Sbjct: 376 MSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALM 427



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 99/203 (48%), Gaps = 16/203 (7%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
             S G V+ WG    +G LG G           T+   P AV S +   V  IA G  H 
Sbjct: 579 LTSSGGVWCWGANF-DGQLGDGT---------TTNRTTPVAV-SGLPSGVTAIAAGGWHT 627

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             +T  GE++ WG+   G+LG G   + S P  +  L    V  +A G  HTCA+T SG+
Sbjct: 628 CALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGWEHTCALTSSGE 686

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WGD  Y  G LG G+  +   P  VSG   G+  + I+ G++HT  +T +G +  +G
Sbjct: 687 VWCWGDNYY--GQLGDGTTTNRSTPGAVSGLPSGV--TAIAAGVYHTCALTGSGGVMCWG 742

Query: 377 DGSFGALGHGDHISTSIPREVET 399
           +   G LG G  +  + P +V T
Sbjct: 743 NNGDGQLGDGRPLYRTTPVDVVT 765


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 172/321 (53%), Gaps = 26/321 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ +E+   L +   A G RH++L+     ++S G+ S G+LG         P+ I+ LS
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 71

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHL 353
            V+++LV+CG+ H+ AV   G ++TWG G+   G LG G SK   ++P K++ +L GI +
Sbjct: 72  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGS--EGQLGIGESKEISFMPTKIN-SLAGIKI 128

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGV 412
             +SCG +H+  ++  G +F++G    G LG G+++ S + P++V++L G+   +V+ G 
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDE 469
            H+ A+ +               G  F WG+   G+L   G+  KE    P  +  L   
Sbjct: 189 THSFALSLM--------------GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL 234

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVAC 528
           N+  ++CG++ +  LT  G V+T G ++  QL   P +    P  ++G      V ++ C
Sbjct: 235 NVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIEC 292

Query: 529 GAYH-VAALTSTSKVYTWGKG 548
           G+YH +A + +T +V + G+G
Sbjct: 293 GSYHTIAYVYTTGQVVSLGRG 313



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 23/301 (7%)

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+ +E  +G+ +   A GE H+  +  +  +Y+ GD +   G LG  S  S   P  + 
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNS--RGQLGQKSPQSTKRPEPIQ 68

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLR 404
             L  +H+  +SCG  H+  V   G +FT+G GS G LG G+    S +P ++ +L G++
Sbjct: 69  A-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 127

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECV 463
             +VSCG +H+ A+              +  G++F+WG   +G+LG G+    +  P+ V
Sbjct: 128 IIQVSCGHYHSLAL--------------SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 173

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAE 520
             L    + QVA G   S AL+  G  +  G+   GQL   G    + +      G +  
Sbjct: 174 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKT 233

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H + LT   +V+T+G  ++ QL H  +  R  P L++ +    V ++ C
Sbjct: 234 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI-GGHVSQIEC 292

Query: 581 G 581
           G
Sbjct: 293 G 293



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 13/224 (5%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG G + G LG GE +          + +P  + S   + +  ++CG  H++ ++
Sbjct: 92  GRVFTWGAG-SEGQLGIGESK--------EISFMPTKINSLAGIKIIQVSCGHYHSLALS 142

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G++FSWG    G+LG G      + PQ ++ L G+ +  VA G  H+ A++  G  + 
Sbjct: 143 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 202

Query: 320 WGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           WG+       L G+ +K   + P  + G L  +++ YISCG  HT+V+T  G +FTFG  
Sbjct: 203 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 261

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           S   L H        P+ +E + G   +++ CG +HT A V  T
Sbjct: 262 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTT 304


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 137/278 (49%), Gaps = 20/278 (7%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVSCWIPRKVSGNLDGI 351
           L   N+  V+CG+ HT A+   G +Y WG  T   G LG  G++    +PR +  +L  I
Sbjct: 30  LDAQNIVAVSCGDAHTLALNDKGQVYAWGLDT--DGQLGLPGTEECIRVPRNIK-SLSDI 86

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSC 410
            +  +SCG +H+  ++    +F++G   +G LG G        P+ +++L G+   +++ 
Sbjct: 87  QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAA 146

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  H+  +              T  G +F WG    G+LG  D+  R  P  +  L  + 
Sbjct: 147 GGAHSFVL--------------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 192

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGA 530
           I  + CG D + ALT  G V+T G+  YGQLG       +  R   E+  S V +VACG 
Sbjct: 193 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 252

Query: 531 YHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
            H +A   +S ++Y++G G NGQLG G   NR SP  V
Sbjct: 253 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 290



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%), Gaps = 17/231 (7%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEI 292
           +P+ ++S   + +  ++CG  H++ ++K  E+FSWG+   G+LG G E    + PQLI+ 
Sbjct: 76  VPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS 135

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G+    +A G  H+  +T SG ++ WG   +  G LG   +   ++P  +  +L    
Sbjct: 136 LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKF--GQLGLNDENDRYVPNLLK-SLRSQK 192

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + YI CG  HTA +T  G +FTFG G +G LGH        PR+V  L G   T+V+CG 
Sbjct: 193 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 252

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
            HT+A V              S G+++++G G  G+LG G    R  P  V
Sbjct: 253 QHTSAFV-------------PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 290



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 16/202 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF WG+   N +   G+  +G+ F +QT    P+ ++S + +    IA G  H+ ++T 
Sbjct: 106 EVFSWGQ---NKY---GQLGLGFEFKKQTS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 156

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G IF WG    G+LG   E D   P L++ L    +  + CGE HT A+T+ G ++T+G
Sbjct: 157 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 216

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSF 380
            G Y  G LGH S      PRKV   L G  ++ ++CG  HT A V S+G +++FG G  
Sbjct: 217 AGGY--GQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 273

Query: 381 GALGHGDHISTSIPREVETLRG 402
           G LG G   STS  +   T++G
Sbjct: 274 GQLGTG---STSNRKSPFTVKG 292



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 18/242 (7%)

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTSIPREVETLRGLRTT 406
           LD  ++  +SCG  HT  +   G ++ +G  + G LG  G      +PR +++L  ++  
Sbjct: 30  LDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIV 89

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAP 465
           +VSCG +H+ A+              +   ++F+WG    G+LG G + + +  P+ +  
Sbjct: 90  QVSCGYYHSLAL--------------SKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS 135

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVE 524
           L+     Q+A G   S  LT SG ++  G   +GQLG+    D  VP  +    ++  V 
Sbjct: 136 LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVY 195

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            + CG  H AALT    V+T+G G  GQLGH    +  +P  V  L    V +V CG   
Sbjct: 196 -ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQH 254

Query: 585 TA 586
           T+
Sbjct: 255 TS 256



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 18/197 (9%)

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGD 453
            +V  L       VSCG  HT A+                 G+++ WG    G+LG  G 
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLAL--------------NDKGQVYAWGLDTDGQLGLPGT 70

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVP 511
           +E    P  +  L D  I QV+CG+  S+AL+    V++ G   YGQLG+         P
Sbjct: 71  EECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSP 130

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             +   +   F++ +A G  H   LT +  ++ WG+   GQLG  D+++R  P L+  L+
Sbjct: 131 QLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR 189

Query: 572 DKQVKRVVCGLNFTAII 588
            +++  + CG + TA +
Sbjct: 190 SQKIVYICCGEDHTAAL 206


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 177/408 (43%), Gaps = 53/408 (12%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG        G GE  +G+        L PK V    +  V  + CG  H +  T
Sbjct: 894  GHVYTWGRN------GSGE--LGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLART 945

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            + G ++ WG    G+LG G       P  I+ L  ++V  +A G  HT  V +SG++  +
Sbjct: 946  ESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVF 1005

Query: 321  GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            G G    G LG G +    +P K+      +     +CG  HTA++T AG ++T G    
Sbjct: 1006 GGG--EVGQLGTGMRKDLLVPTKLQAMPSIVQ---AACGYCHTALLTEAGEVYTCGSAMS 1060

Query: 381  GALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LGH D++      P+ VE L G R   ++CG +HT A+              T    +
Sbjct: 1061 GQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAI--------------TDLDNV 1106

Query: 439  FTWG-------DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            +TWG       DG   +        R+ P  V  L+ + I  V+CGH  SVA T  G VY
Sbjct: 1107 YTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVY 1166

Query: 492  TMGSAAYGQL-------GVPVADG------LVPTRVDGEIAES--FVEEVACGAYHVAAL 536
               S    Q        G+  A G      LV    DG+ A+S   V+  A G      +
Sbjct: 1167 VWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVV 1226

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            T    +Y+WG GA GQLG GD+ +R    +V   K ++ +R    L +
Sbjct: 1227 TENGLLYSWGSGAFGQLGLGDQGDRAE--IVQVAKSEESRRRSVRLTY 1272



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 4/122 (3%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEV 526
            +  V+CG +   ALT +GHVYT G    G+LG     G   L P +V        V+EV
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVI-FFKSKCVKEV 934

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            CG  H  A T +  VY WG G  GQLG GD+     P  +  L+   V ++  G   T 
Sbjct: 935 VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTI 994

Query: 587 II 588
           ++
Sbjct: 995 VV 996



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 11/90 (12%)

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           G ++ G+L VP   GLV  R         V  V+CG  H AALT    VYTWG+  +G+L
Sbjct: 857 GVSSGGKLNVPFG-GLVSMRQ--------VVNVSCGWNHCAALTENGHVYTWGRNGSGEL 907

Query: 554 GHGDKDN--RNSPTLVDFLKDKQVKRVVCG 581
           GHGDK    +  P  V F K K VK VVCG
Sbjct: 908 GHGDKSGVPQLHPKQVIFFKSKCVKEVVCG 937


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 179/390 (45%), Gaps = 39/390 (10%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           G  H    S   V+  G G+  G LG G E     +F+R     LP+ V  + + +    
Sbjct: 119 GKYHTLLISNSSVYSCGSGLC-GVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFN---- 173

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYH 307
                HA  V + GE+F+ G+ S    GH R+    +  P+L+E L G+  + VA G   
Sbjct: 174 -----HAAFVMQSGEVFTCGDNSSSCCGH-RDTTRPIFRPRLVESLKGIPCKQVAAGLNF 227

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  +TR G +YT G  T+  G LGHG       P+ +      +    I+ G  +   VT
Sbjct: 228 TVFLTRQGHVYTCGTNTH--GQLGHGDTQDRPTPKMIEVLSSVVQ---IAAGPSYILSVT 282

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSS 425
             G +++FG G+   LGHG+      PR ++  R  G+   RVS G  H     VA DS+
Sbjct: 283 ENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHA----VALDSN 338

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G ++TWG G  G LGHGD+  +  PE +  L ++   QV      +  L 
Sbjct: 339 ----------GFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLV 388

Query: 486 TSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            SG VY  GS  +G LG     V+D ++  R+   +    V +++ G YH   +TS  ++
Sbjct: 389 NSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQI 448

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           + +G     QLGH    +   PT + F+KD
Sbjct: 449 FGFGDNERAQLGHDTLRSCLEPTQI-FIKD 477



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 24/294 (8%)

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           Q++E   G N+++   G+YHT  ++ S  +Y+ G G    G+LG GS+ +  +      +
Sbjct: 105 QMVETSLG-NMQITT-GKYHTLLISNS-SVYSCGSGL--CGVLGQGSETTQCVAFTRIDS 159

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTT 406
                + ++S    H A V  +G +FT GD S    GH D       PR VE+L+G+   
Sbjct: 160 PPLPRVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCK 219

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +V+ G+  T  +              T  G ++T G    G+LGHGD + R  P+ +  L
Sbjct: 220 QVAAGLNFTVFL--------------TRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VE 524
              ++ Q+A G    +++T +G VY+ GS A   LG     D L P  +     +   + 
Sbjct: 266 --SSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIV 323

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            V+ G  H  AL S   VYTWGKG  G LGHGD+  + +P L+  LK++   +V
Sbjct: 324 RVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQV 377



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           LSSVV  ++  S        G V+ +G G AN  LG GE         Q D L P+ ++ 
Sbjct: 265 LSSVVQIAAGPSYILSVTENGTVYSFGSG-ANFCLGHGE---------QHDELQPRPIQK 314

Query: 241 TMALDVH--NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                +H   ++ G  HAV +   G +++WG+   G LGHG E + + P+L+  L     
Sbjct: 315 FRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLA 374

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             V   +  T  +  SG +Y +G   + S G L          PR +   L   H+S IS
Sbjct: 375 VQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPR-ILDTLRAHHVSQIS 433

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGH 385
            GL+HT V+TS G +F FGD     LGH
Sbjct: 434 TGLYHTVVITSRGQIFGFGDNERAQLGH 461


>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
           member (nekl-1) [Ciona intestinalis]
          Length = 1265

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 146/308 (47%), Gaps = 33/308 (10%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S V +  VA G  H   VT    +Y+WG+  Y  G LGHG       P  +   L G  +
Sbjct: 579 SKVKIRQVAVGTNHVVVVTTERVVYSWGENAY--GQLGHGHLEPVAKPHVIEA-LKGKPI 635

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           +  SCG   +  VT  G L T GDGS G LG G+  ST+ P  VE L  +  + V+CG  
Sbjct: 636 TTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDA 695

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           H  A+              +S G+++ WG G +GRLG G  +  + P  VA  I++ I  
Sbjct: 696 HVVAL--------------SSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVA--INQAIRD 739

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--------PTRVDGEIAESFVE- 524
           V CGHD ++ +T  G +   G+  Y +LG+    G +         T V+     + V+ 
Sbjct: 740 VRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKS 799

Query: 525 -----EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
                +VA G +H   LT +++V   G    GQ+G GD   R SP LV  +KD  V  V 
Sbjct: 800 IKGVVDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVA 859

Query: 580 CGLNFTAI 587
           CG  +TA+
Sbjct: 860 CGNTYTAV 867



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 139/321 (43%), Gaps = 41/321 (12%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + +  +A G  H V+VT +  ++SWGE + G+LGHG    V+ P +IE L G  +   +C
Sbjct: 581 VKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSC 640

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G   +  VT +G L T GDG+   G LG G+  S   P  V   L  + +S ++CG  H 
Sbjct: 641 GSNFSVFVTDNGILLTCGDGS--QGCLGQGNLSSTTRPSMVEP-LLSVDVSTVACGDAHV 697

Query: 364 AVVTSAGHLFTFGDGSFGAL--GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
             ++S G ++ +G GS G L  GH DH     P  V   + +R  R  CG  H   + + 
Sbjct: 698 VALSSEGEIYAWGCGSQGRLGTGHDDHCIE--PHRVAINQAIRDVR--CG--HDGTMFI- 750

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK----------------EPRLFPECVAP 465
                      T  G L   G+    +LG  ++                E R  P  V  
Sbjct: 751 -----------TDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKS 799

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
           +  + +  VA G   +  LT S  V  +GS   GQ+G           +   I +  V  
Sbjct: 800 I--KGVVDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMV 857

Query: 526 VACGAYHVAALTSTSKVYTWG 546
           VACG  + A  TS + V  WG
Sbjct: 858 VACGNTYTAVGTSNNIVLYWG 878



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 49/323 (15%)

Query: 204 FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
           + WGE  A G LG G                P  +E+     +   +CG+  +V VT  G
Sbjct: 603 YSWGEN-AYGQLGHGHLE---------PVAKPHVIEALKGKPITTTSCGSNFSVFVTDNG 652

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            + + G+ S G LG G  +  + P ++E L  V+V  VACG+ H  A++  G++Y WG G
Sbjct: 653 ILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAHVVALSSEGEIYAWGCG 712

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +   G LG G    C  P +V+ N     +  + CG   T  +T  G L   G+  +  L
Sbjct: 713 S--QGRLGTGHDDHCIEPHRVAINQ---AIRDVRCGHDGTMFITDVGTLLACGNNQYNKL 767

Query: 384 GHGDHIS----------------TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           G  +                      P  V++++G+    V+ G  HT  +         
Sbjct: 768 GLNERTGFIMMFNNRLKKTEVECRKTPTVVKSIKGV--VDVAMGRHHTTVL--------- 816

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T   ++   G   +G++G GD + R  P  V  + D ++  VACG+  + A+ TS
Sbjct: 817 -----TESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYT-AVGTS 870

Query: 488 GHVYTMGSAAYGQLGVPVADGLV 510
            ++     + +G L +  + GL+
Sbjct: 871 NNIVLYWGSRFGPLDM-TSQGLL 892



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%)

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           T ++G  ++  + +VA G  HV  +T+   VY+WG+ A GQLGHG  +    P +++ LK
Sbjct: 572 TPIEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALK 631

Query: 572 DKQVKRVVCGLNFTAII 588
            K +    CG NF+  +
Sbjct: 632 GKPITTTSCGSNFSVFV 648


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 161/346 (46%), Gaps = 31/346 (8%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           ++ WG  +     LGG E         +   + P+ ++ + A +V   ACG  H +L+TK
Sbjct: 3   LYCWGSTVHGELGLGGIE---------EEQVMTPREMDWSQAANVQQAACGGSHTLLLTK 53

Query: 262 QGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            G++++ G    G+LGH         PQ I  L    V  V+CG  H+ A+T  G L++W
Sbjct: 54  DGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G     +G LGH   +  +   ++  ++    +  ISCG  H   +T++G LF +G   +
Sbjct: 114 GSNA--TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEY 171

Query: 381 GALGHGDHISTSIPRE--VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           G LG G      +P    V++L G+    ++CG  H+ AV              +  G +
Sbjct: 172 GQLGLGT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAV--------------SKSGAI 216

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F WG    G+LG  D + R +P  +  L    +  ++CG D SV LT  G V+T G   +
Sbjct: 217 FGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTF 276

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVY 543
           GQLG       +  R+  E+  S + ++ACG  H  A   S  KVY
Sbjct: 277 GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 158/325 (48%), Gaps = 28/325 (8%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG    G LG G   E  V  P+ ++     NV+  ACG  HT  +T+ G LYT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 323 GTYNSGLLGHGSK-VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              + G LGH +  +    P+ +S  L+   ++ +SCGL H+  +T+ G LF++G  + G
Sbjct: 63  N--DHGQLGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 382 ALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LGH  D +S   PR ++++      ++SCG  H  A+              T+ G+LF 
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLAL--------------TNSGELFA 165

Query: 441 WGDGDKGRLG---HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           WG  + G+LG    G K P      V  L    I  +ACG + S A++ SG ++  G   
Sbjct: 166 WGANEYGQLGLGTTGKKVPT--ATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNT 223

Query: 498 YGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+   D    PT++   +    V  ++CG      LT    V+T G G  GQLGHG
Sbjct: 224 FGQLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHG 282

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
              N   P +V  L   ++ ++ CG
Sbjct: 283 THGNEILPRMVFELMGSKITQIACG 307



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 18/275 (6%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LY WG   +    LG   +     PR++  +    ++   +CG  HT ++T  G L+T G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWS-QAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 377 DGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           +   G LGH  +++    P+ +  L     T+VSCG+ H+ A+              T+ 
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL--------------TNW 107

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF+WG    G+LGH  D      P  +  +  + + Q++CGH   +ALT SG ++  G
Sbjct: 108 GQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167

Query: 495 SAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           +  YGQLG+      VPT  +   +A   +  +ACG  H  A++ +  ++ WGK   GQL
Sbjct: 168 ANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D D+R  PT +  L+   V+ + CG +F+  +
Sbjct: 228 GLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFL 262


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 37/356 (10%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV-------SHPQLIE--ILSGVNV 298
           N+  G    V +     ++SWG    GR G G   D          P+ +E  +L    +
Sbjct: 47  NLIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLI 106

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + VACG  H+  VT SG L T   G  ++G LG G+  +     +V G      ++ ++ 
Sbjct: 107 KKVACGGAHSMIVTESGRLLT--CGLNDNGQLGLGNLENASEFEEVKGTES---IADVAA 161

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSI-PREVETLRGLRTTRVSCGVWHTA 416
           G WHT   +  G L+ +G    G LGH D  +  ++ P+E+  LR     +V+CG +H+ 
Sbjct: 162 GFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSM 221

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+              T  G+++TWG G  GRLGHG  E    P+ V  L+ ENI  +  
Sbjct: 222 AL--------------TKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHA 267

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           G + S A++TSG V+  G   +  LG     D L P  +D   +   + ++A G++H AA
Sbjct: 268 GFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTS---IRQLAFGSFHAAA 324

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRN--SPTLVDFLKDKQ-VKRVVCGLNFTAII 588
           ++ +  ++TWG   +G LGHG K       PT++D     Q  K+V CG   T ++
Sbjct: 325 VSHSGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVV 380



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 202/431 (46%), Gaps = 33/431 (7%)

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG- 217
           +++AF    N   SA    R+   S +    HG   +     G   +W  G A+   GG 
Sbjct: 22  MSSAFRHKENSMLSAPLICRLHAGSNL---IHGR-EQKVTLAGARTLWSWGSADHGRGGS 77

Query: 218 GEHRVGYSFSRQTDALLPKAVESTM--ALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
           G H     F  +     P+ VE  +  A  +  +ACG  H+++VT+ G + + G    G+
Sbjct: 78  GGHTDAPIF--EVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQ 135

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGS 334
           LG G   + S  +  E+    ++  VA G +HT A ++ G LY WG   +  G LG H +
Sbjct: 136 LGLGNLENAS--EFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKH--GQLGHHDT 191

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP 394
            V   +  +    L    +  ++CG +H+  +T  G ++T+G G+ G LGHG      +P
Sbjct: 192 AVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP 251

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           + VE L G   + +  G  +++AV              ++ GK+F WG G    LG GDK
Sbjct: 252 KRVEALVGENISSIHAGFEYSSAV--------------STSGKVFVWGYGHFYVLGQGDK 297

Query: 455 EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVP 511
           + +L P  V      +I Q+A G   + A++ SG ++T G A +G LG  +      L P
Sbjct: 298 KDQLAP--VVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEP 355

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           T +D        ++VACG+ H   +T T  V+++G G  GQLG G   +   P  +    
Sbjct: 356 TVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFV 415

Query: 572 DKQVKRVVCGL 582
            K +++V CGL
Sbjct: 416 GKSLRQVACGL 426



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 16/216 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG G A+G LG G            D  +PK VE+ +  ++ +I  G  ++  V+
Sbjct: 227 GEVYTWGFG-AHGRLGHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVS 276

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++F WG      LG G + D   P +++  +  ++  +A G +H  AV+ SG L+TW
Sbjct: 277 TSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPT--SIRQLAFGSFHAAAVSHSGMLFTW 334

Query: 321 GDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G  T+  G LGHG K    I  P  +       +   ++CG  HT VVT  G +F+FG G
Sbjct: 335 GHATH--GPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLG 392

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
             G LG G  +    P+++    G    +V+CG++H
Sbjct: 393 GQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           D  +  +     F  S+  +   S H +A       G +F WG              +G+
Sbjct: 296 DKKDQLAPVVLDFPTSIRQLAFGSFHAAA---VSHSGMLFTWGHATHG--------PLGH 344

Query: 225 SFSRQTDALLPKAVESTMAL-DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
                   L P  +++   L +   +ACG++H ++VT  G++FS+G    G+LG G + D
Sbjct: 345 GLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLD 404

Query: 284 VSHPQLIEILSGVNVELVACGEYH 307
              P+ I    G ++  VACG +H
Sbjct: 405 HYEPKQIPRFVGKSLRQVACGLFH 428


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 32/356 (8%)

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           E+    ++   A G RH++L+   G + + G+ S G+LG         P LI+ L  +NV
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNV 75

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYIS 357
           +L++CG+ H+ AV   G ++ WG G+   G LG G  K   + P KV   L GI +  +S
Sbjct: 76  DLLSCGKEHSLAVCHKGRVFAWGAGS--EGQLGIGEFKELNFTPMKVKA-LAGIKIIQVS 132

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           CG +H+  ++  G +F++G+ S G LG G + +S   P+ V++L G+   +V+ G  H+ 
Sbjct: 133 CGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSF 192

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQ 473
           A+ ++              G  F WG  + G+L   G+  P     P  +  L +  +  
Sbjct: 193 ALSLS--------------GTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVY 238

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH 532
           ++CG + +  LT  G V+T G  + GQLG  P A+   P  V+G   +  V ++ CG+YH
Sbjct: 239 ISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYH 296

Query: 533 -VAALTSTSKVYTWGKGANGQLGHGDKD----NRNSPTLV--DFLKDKQVKRVVCG 581
            +  + +T +V ++G+G +        D    N +   L+  D L + QVK +  G
Sbjct: 297 TLVYVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCLISADDLVNVQVKHIFAG 352



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 139/269 (51%), Gaps = 25/269 (9%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG GE +   +F+     
Sbjct: 69  ALETLNVDLLSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIGEFK-ELNFT----- 116

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             P  V++   + +  ++CG  H++ +++ G++FSWG  S G+LG G+E      PQ ++
Sbjct: 117 --PMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVK 174

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL---GHGSKVSCWIPRKVSGNL 348
            L G+ +  VA G  H+ A++ SG  + WG    N+G L   G+   V  + PR + G L
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN--NAGQLALSGNNVPVQSYKPRSI-GAL 231

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             + + YISCG  HTAV+T  G +FTFGD S G LGHG       P+ VE + GL  +++
Sbjct: 232 KELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGL-VSQI 290

Query: 409 SCGVWHTAAVVVATD---SSSSSPSGSTS 434
            CG +HT   V  T    S    PS +TS
Sbjct: 291 DCGSYHTLVYVYTTRQVISFGRGPSDTTS 319



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 140/259 (54%), Gaps = 25/259 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P  +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   +++  P  ++ L
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK-VSCWIPRKVSGNLDGIH 352
           +G+ +  V+CG YH+ A+++ G +++WG+ ++  G LG G + +S   P++V  +L+GI 
Sbjct: 124 AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSH--GQLGLGKEFLSQESPQRVK-SLEGIP 180

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++ +G  F +G  + G L   G+   + +  PR +  L+ L    +S
Sbjct: 181 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYIS 240

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LGHG    +  P+ V   ID 
Sbjct: 241 CGSEHTAVL--------------TQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG-IDG 285

Query: 470 NICQVACG--HDLSVALTT 486
            + Q+ CG  H L    TT
Sbjct: 286 LVSQIDCGSYHTLVYVYTT 304



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 21/196 (10%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A      G +    S+        P+++
Sbjct: 179 IPLAQVAAGGAHSFA---LSLSGTSFGWGSNNAGQLALSGNNVPVQSYK-------PRSI 228

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG+ H  ++T+ G++F++G+ S G+LGHG  A+   PQL+E + G+ V
Sbjct: 229 GALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGL-V 287

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDG------TYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
             + CG YHT   V  +  + ++G G      +  S  L   S VSC I    + +L  +
Sbjct: 288 SQIDCGSYHTLVYVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCLIS---ADDLVNV 344

Query: 352 HLSYISCGLWHTAVVT 367
            + +I  G +   V T
Sbjct: 345 QVKHIFAGTYANFVTT 360


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 170/379 (44%), Gaps = 64/379 (16%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG  + G+LG     D   PQL+   S  ++  +ACG  H  A+T +G   +WG G 
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRG- 78

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            NSG LGHG  VS  +  K   +LDG  ++++S G  H+  V+  G +FT GDGSFG LG
Sbjct: 79  -NSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLG 137

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV-------------------------- 418
           HGD+ S   P +V     L   +V+CG+ H+  +                          
Sbjct: 138 HGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKS 197

Query: 419 --------------VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
                         +V T ++    +  +  G ++TWG G KG       E    P+C+ 
Sbjct: 198 VNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF------EDAHVPQCLN 251

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----------VPVADGLVPTRV 514
             +  N  +VA G + ++A++  G VY +G    G L            P        +V
Sbjct: 252 SSL--NFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKV 309

Query: 515 DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF---LK 571
            G +  + + ++A GA H   +T   ++ TWG G +GQLG GD  ++ SP  V     L 
Sbjct: 310 PG-LDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLN 368

Query: 572 DKQVKRVVCGLNFTAIICL 590
           +    RV CG  FT  + +
Sbjct: 369 EAASIRVFCGSGFTFAVTM 387



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 32/366 (8%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           + SLSS+ S +  G+      S G    WG G  +G LG GE          ++ L PKA
Sbjct: 47  QFSLSSISSLACGGAHVIALTSAGKALSWGRG-NSGQLGHGE--------VVSNTLYPKA 97

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           V S     + +++ G  H+  V+  G +F+ G+ S G+LGHG  A    P  +     ++
Sbjct: 98  VTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLH 157

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V  VACG  H+  + +   +Y +G G      + +    S  +P+ VSG  +G+ +   +
Sbjct: 158 VAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSG-FEGVEIVGTA 216

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
               H+A V+  GH++T+G G  G           +P+ + +   L  T+V+ G  H  A
Sbjct: 217 ANGDHSAAVSVDGHVYTWGRGFKG------FEDAHVPQCLNS--SLNFTKVALGWNHALA 268

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP---ECVAPLIDENICQV 474
           +   +        G    G L      D   +G     P L     E V  L    I  +
Sbjct: 269 M---SGEGEVYMLGGNHLGVL-----SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDI 320

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRV--DGEIAESFVEEVACGAY 531
           A G + SV +T  G + T G   +GQLG+    D   P  V  D ++ E+    V CG+ 
Sbjct: 321 AAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSG 380

Query: 532 HVAALT 537
              A+T
Sbjct: 381 FTFAVT 386



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 9/157 (5%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           ++++WG G +G+LG    +   FP+ +      +I  +ACG    +ALT++G   + G  
Sbjct: 19  RVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRG 78

Query: 497 AYGQL--GVPVADGLVP---TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             GQL  G  V++ L P   T +DG     F+  V+ G  H   ++ T  V+T G G+ G
Sbjct: 79  NSGQLGHGEVVSNTLYPKAVTSLDG----YFITHVSAGWSHSGFVSDTGFVFTCGDGSFG 134

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           QLGHGD  +  SP  V    D  V +V CG+  + ++
Sbjct: 135 QLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVL 171


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 164/348 (47%), Gaps = 40/348 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH I+CG  H  +VT  G+++ +G    G+LG G +  V  P  ++ L     +L  CG 
Sbjct: 55  VH-ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGR 113

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T +G++Y  G      G LG G          +S   +   +  ++ G + +A 
Sbjct: 114 NHTLVYTENGNMYAAGGN--GEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 171

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           VT  G LF +GD S G +G  D    S+P +V+   G   + +SCG +H+A +       
Sbjct: 172 VTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDV--GKPISSISCGYYHSAFI------- 222

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA------PL--IDENICQVACG 477
                  T  G+L+T+G+ + G+LG       L PE +       P+  I E + +VACG
Sbjct: 223 -------TGDGELYTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVACG 268

Query: 478 HDLSVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
            + +V LT +G VYT G   YGQL  G  +    VP  V   + +  +  + CG  H A 
Sbjct: 269 GEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRKCKIRNITCGESHTAV 326

Query: 536 LTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +     ++T+G G +G+LG G+++  N+  P L        V  V CG
Sbjct: 327 IAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 374



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G   +  G LG GSK +   P  V   L         CG 
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDW--GQLGLGSKNTVHKPTCVKA-LKPEKTKLAVCGR 113

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAVV 419
            HT V T  G+++  G    G LG GD    +    +       +  +++ G + +AAV 
Sbjct: 114 NHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV- 172

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        T  G+LF WGD  +G++G  DK     P  V   + + I  ++CG+ 
Sbjct: 173 -------------TEDGQLFVWGDNSEGQIGLADKTYVSVPCQVD--VGKPISSISCGYY 217

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +T  G +YT G    G+LG+    + +  VP  V G I E  V +VACG  H   L
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLG-IMEK-VNKVACGGEHTVVL 275

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T T  VYT+G G  GQLGHG    + S P  V  L+  +++ + CG + TA+I
Sbjct: 276 TETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVI 327



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 24/193 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G   + +T   +P  V+  +   + +I+CG  H+  +T
Sbjct: 176 GQLFVWGDN--------SEGQIG--LADKTYVSVPCQVD--VGKPISSISCGYYHSAFIT 223

Query: 261 KQGEIFSWGEESGGRLG----HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             GE++++GE   G+LG      + + V  P ++ I+  VN   VACG  HT  +T +G 
Sbjct: 224 GDGELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEKVNK--VACGGEHTVVLTETG- 279

Query: 317 LYTWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +YT+G G Y  G LGHG+ +    +P+ V  +L    +  I+CG  HTAV+   G +FTF
Sbjct: 280 VYTFGLGQY--GQLGHGTLLFKTSVPKSVK-HLRKCKIRNITCGESHTAVIAENGLMFTF 336

Query: 376 GDGSFGALGHGDH 388
           GDG  G LG G+ 
Sbjct: 337 GDGRHGKLGLGEE 349



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQLIE 291
           +PK+V+      + NI CG  H  ++ + G +F++G+   G+LG G E  A+   P L  
Sbjct: 302 VPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCS 361

Query: 292 ILSGVNVELVACGEYH 307
                 V LVACG  H
Sbjct: 362 NFLSFTVLLVACGGCH 377


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 149/287 (51%), Gaps = 23/287 (8%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAV-TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           P LI+   G+ V ++ACG+ H  AV      + +WG   +  G LG G +V+   P  +S
Sbjct: 131 PTLIK--QGLIVSMIACGDSHALAVLPNDATVLSWGCNRW--GQLGLGDQVNRCHPTPIS 186

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G    I + +++ G  H+ V++  G LF+FG G+FG LGHG+ + +  PR + TL G   
Sbjct: 187 GLSQSIPV-FVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHI 245

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+ G+ H+AAV               S G L+TWG    G+LG G  +    P     
Sbjct: 246 VSVAAGLMHSAAV--------------DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKE 291

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAES-FV 523
           L   NI +V CG + ++ L  +GHVY+ G    GQLG+    D + P R+D ++ ++  +
Sbjct: 292 LERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEI 351

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDF 569
            ++A G YHV  LT    VY++G  ++G LG GD     S P L+ F
Sbjct: 352 IDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPF 398



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 175/385 (45%), Gaps = 70/385 (18%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLV-TKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           LP  ++    L V  IACG  HA+ V      + SWG    G+LG G + +  HP  I  
Sbjct: 130 LPTLIK--QGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISG 187

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           LS      VA G  H+  +++ G+L+++G GT+  G LGHG+++  + PR +S  L G H
Sbjct: 188 LSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTF--GRLGHGNELPSFNPRPIS-TLVGKH 244

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  ++ GL H+A V S G L+T+G   +G LG G     ++P + + L      +V CG 
Sbjct: 245 IVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGK 304

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-- 470
            HT  + V               G ++++G    G+LG G     + P  +   + +N  
Sbjct: 305 NHTLVLDVN--------------GHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDE 350

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG------LVP------------- 511
           I  +A G+   + LT  G VY+ G  + G LG+    G      L+P             
Sbjct: 351 IIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSID 410

Query: 512 ----------------------------TRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
                                         +  EI +  V ++A G +H A +TS+ ++Y
Sbjct: 411 SYKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAV-KIAAGGWHSAIITSSGRLY 469

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVD 568
           T+G G N +LG+  +++++ P +V+
Sbjct: 470 TFGLGDNFRLGNNCQEDQDMPCIVN 494



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 76/313 (24%)

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G++F +G G   G LG G     ++         P+ + + +   + ++A G  H+  V
Sbjct: 209 FGELFSFGCGTF-GRLGHGNELPSFN---------PRPISTLVGKHIVSVAAGLMHSAAV 258

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             QG +++WG    G+LG G     + P   + L   N+  V CG+ HT  +  +G +Y+
Sbjct: 259 DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYS 318

Query: 320 WGDGTYN-SGLLGHGSKVSCWIPRKVSGNL-DGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           +G   +N  G LG GS      P ++  +L     +  I+ G +H  ++T  G +++FG 
Sbjct: 319 FG---FNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGY 375

Query: 378 GSFGALGHGDHI-------------------------------------------STSIP 394
            S GALG GD +                                           +  +P
Sbjct: 376 ISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLP 435

Query: 395 REVETLR---GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +V  L    G    +++ G WH+A +              TS G+L+T+G GD  RLG+
Sbjct: 436 PKVVELHNEIGDVAVKIAAGGWHSAII--------------TSSGRLYTFGLGDNFRLGN 481

Query: 452 GDKEPRLFPECVA 464
             +E +  P C+ 
Sbjct: 482 NCQEDQDMP-CIV 493



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 13/202 (6%)

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           +GL  + ++CG  H  AV+         P+ +T    + +WG    G+LG GD+  R  P
Sbjct: 136 QGLIVSMIACGDSHALAVL---------PNDAT----VLSWGCNRWGQLGLGDQVNRCHP 182

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
             ++ L       VA G   S  L+  G +++ G   +G+LG          R    +  
Sbjct: 183 TPISGLSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVG 242

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             +  VA G  H AA+ S   +YTWG    GQLG G       P     L+   + +VVC
Sbjct: 243 KHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVC 302

Query: 581 GLNFTAIICLHKWVSSVDHSVC 602
           G N T ++ ++  V S   +VC
Sbjct: 303 GKNHTLVLDVNGHVYSFGFNVC 324



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 58/259 (22%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           + SV +   H +A    DS G ++ WG     G LG G      +  + T   LP   + 
Sbjct: 245 IVSVAAGLMHSAA---VDSQGALYTWGWN-RYGQLGLG------TVKKHT---LPNKNKE 291

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
               ++  + CG  H +++   G ++S+G    G+LG G   D   P  I++    N E+
Sbjct: 292 LERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEI 351

Query: 301 V--ACGEYHTCAVTRSGDLYTWG---DGTYNSG-LLGHGSKVSCW--------------- 339
           +  A G YH   +T+ G +Y++G   DG    G ++GH S+                   
Sbjct: 352 IDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDS 411

Query: 340 ----------------------IPRKVS--GNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
                                 +P KV    N  G     I+ G WH+A++TS+G L+TF
Sbjct: 412 YKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTF 471

Query: 376 GDGSFGALGHGDHISTSIP 394
           G G    LG+       +P
Sbjct: 472 GLGDNFRLGNNCQEDQDMP 490


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 47/409 (11%)

Query: 198  DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
            D++G +F WG+    G +G          S++     PK +       V ++ACG +H+V
Sbjct: 1497 DAVGVMFSWGQN-TEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSV 1555

Query: 258  LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
             +T  G + +WG+ S  +LG G ++  S P    I +  N++ V+CG  HT A+   G +
Sbjct: 1556 AITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQV 1615

Query: 318  YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            ++WG+G    GLLGHG++  C  P+ +   L G+++ +I CG  H+ V+T    ++++G 
Sbjct: 1616 FSWGNGE--GGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQVYSWGR 1672

Query: 378  GSFGALGHGDHIST------SIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
               G LG    + T      + P+ V+  L G+   +++ G  H+ A+ +          
Sbjct: 1673 NEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALN--------- 1723

Query: 431  GSTSCGKLFTWGDGDKGRLGHG---DKEPRLFPECVAPL--IDENICQVACGHDLSVALT 485
                 G+++ WG    G++G G   D  P   P+ +  L  I++  C   CG + S  L 
Sbjct: 1724 -----GQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFC---CGLNDSNQLG 1775

Query: 486  TSGHVYTMGSAAYGQLGV--------PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL- 536
                   + S     L           V D  +P ++D    +  V  V+CG  H  AL 
Sbjct: 1776 LEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDC-FHQIPVLHVSCGHNHSLALV 1834

Query: 537  ---TSTSKVYTWGKGANGQLGHGDK-DNRNSPTLVDFLKDKQVKRVVCG 581
               T    ++ WG   +GQLG G+   N + P  + +L+D     + CG
Sbjct: 1835 VADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACG 1883



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 35/365 (9%)

Query: 183  SVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
            ++V+S + G  H       G V  WG+  ++  LG GE         ++ + +P      
Sbjct: 1542 TIVTSVACGYQHSVAITYAGTVLAWGDN-SHSQLGLGE---------KSPSSVPFPTPIP 1591

Query: 242  MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
               ++ +++CG+ H + +   G++FSWG   GG LGHG E     P++IE L G+NV+ +
Sbjct: 1592 ALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFI 1651

Query: 302  ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV----SCWI--PRKVSGNLDGIHLSY 355
             CG  H+  +T++  +Y+WG      G LG   K+     C++  P++V GNL+G+ +  
Sbjct: 1652 VCGGLHSLVLTKNRQVYSWGRNE--GGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQ 1709

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR--VSCGVW 413
            I+ G  H+  +   G ++ +G    G +G G    T    E + +  L        CG+ 
Sbjct: 1710 IAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLN 1769

Query: 414  HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
             +  + +  +    +   ST+   L  +   D+ R       P+   +C   +    +  
Sbjct: 1770 DSNQLGLEKEPIKIT---STTNNILDQYKPQDQKRAVTDVFIPKKM-DCFHQI---PVLH 1822

Query: 474  VACGHDLSVALTTSGHVYTM----GSAAYGQLGVPVA--DGLVPTRVDGEIAESFVEEVA 527
            V+CGH+ S+AL  +   + M    G   +GQLG+     +  VP R    + +     +A
Sbjct: 1823 VSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVP-RPITYLQDVTTYSMA 1881

Query: 528  CGAYH 532
            CG+YH
Sbjct: 1882 CGSYH 1886



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 15/176 (8%)

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG--HGDKEPRL-------FPECVAPLID 468
            +V   +   S+ S   + G +F+WG   +G++G  +  K+  L       FP+ + PL D
Sbjct: 1482 IVQILEKDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKD 1541

Query: 469  ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEE 525
              +  VACG+  SVA+T +G V   G  ++ QLG+     +    PT +    A + ++ 
Sbjct: 1542 TIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIP---ALTNIQS 1598

Query: 526  VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            V+CG+ H  AL    +V++WG G  G LGHG++D   SP +++ LK   V  +VCG
Sbjct: 1599 VSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG 1654


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 161/346 (46%), Gaps = 31/346 (8%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           ++ WG  +     LGG E         +   + P+ ++ + A +V   ACG  H +L+TK
Sbjct: 3   LYCWGSTVHGELGLGGIE---------EEQVMTPREMDWSQAANVQQAACGGSHTLLLTK 53

Query: 262 QGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            G++++ G    G+LGH         PQ I  L    V  V+CG  H+ A+T  G L++W
Sbjct: 54  DGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G     +G LGH   +  +   ++  ++    +  ISCG  H   +T++G LF +G   +
Sbjct: 114 GSNA--TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEY 171

Query: 381 GALGHGDHISTSIPRE--VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           G LG G      +P    V++L G+    ++CG  H+ AV              +  G +
Sbjct: 172 GQLGLGT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAV--------------SKSGAI 216

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F WG    G+LG  D + R +P  +  L    +  ++CG D SV LT  G V+T G   +
Sbjct: 217 FGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTF 276

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVY 543
           GQLG       +  R+  E+  S + ++ACG  H  A   S  KVY
Sbjct: 277 GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 158/323 (48%), Gaps = 24/323 (7%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG    G LG G   E  V  P+ ++     NV+  ACG  HT  +T+ G LYT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 323 GTYNSGLLGHGSK-VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              + G LGH +  +    P+ +S  L+   ++ +SCGL H+  +T+ G LF++G  + G
Sbjct: 63  N--DHGQLGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 382 ALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LGH  D +S   PR ++++      ++SCG  H  A+              T+ G+LF 
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLAL--------------TNSGELFA 165

Query: 441 WGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           WG  + G+LG G    ++     V  L    I  +ACG + S A++ SG ++  G   +G
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 500 QLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           QLG+   D    PT++   +    V  ++CG      LT    V+T G G  GQLGHG  
Sbjct: 226 QLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
            N   P +V  L   ++ ++ CG
Sbjct: 285 GNEILPRMVFELMGSKITQIACG 307



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 18/275 (6%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LY WG   +    LG   +     PR++  +    ++   +CG  HT ++T  G L+T G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWS-QAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 377 DGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           +   G LGH  +++    P+ +  L     T+VSCG+ H+ A+              T+ 
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL--------------TNW 107

Query: 436 GKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF+WG    G+LGH  D      P  +  +  + + Q++CGH   +ALT SG ++  G
Sbjct: 108 GQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167

Query: 495 SAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           +  YGQLG+      VPT  +   +A   +  +ACG  H  A++ +  ++ WGK   GQL
Sbjct: 168 ANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D D+R  PT +  L+   V+ + CG +F+  +
Sbjct: 228 GLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFL 262


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 162/375 (43%), Gaps = 75/375 (20%)

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           +++ P+L++ L  +N E V+ G      V  SG+LY W  G  + G LG G +    +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMW--GANSEGQLGTGDRRDASVPR 177

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTS--------- 392
            V   L G  +  ++C   HT      G  + +G    G LG HG  I +S         
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 393 ---------------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
                           PR +E+L G     V+CG +H+A + +     +S          
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTS---------- 286

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LFT G G  GRLGHGD+E R  P  V  L + NI  +ACG   +  +T++G +YT G AA
Sbjct: 287 LFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAA 346

Query: 498 YGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ--- 552
           +G+LG+    G  L+P  V G +    V  VA G+ H A +T+  ++YTWG+G  G    
Sbjct: 347 FGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTR 406

Query: 553 -------------------------------LGHGDKD-NRNSPTLVDFLKDKQVKRVVC 580
                                          LGHGD +   N P  +  L  K V ++ C
Sbjct: 407 FFRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSC 466

Query: 581 GLNFTAIICLHKWVS 595
              FT   C  + VS
Sbjct: 467 ASTFTVAFCDPQRVS 481



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 166/408 (40%), Gaps = 93/408 (22%)

Query: 143 ANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGD 202
           A T    +S SFS SP    F + S + +S      +   +    S+ G         G+
Sbjct: 94  AATPLGGESSSFSASPALAVFAETSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGE 153

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +++WG   + G LG G+ R         DA +P+ V++     V  +AC   H V     
Sbjct: 154 LYMWGAN-SEGQLGTGDRR---------DASVPRLVKALHGKVVKAVACSQEHTVCCLDD 203

Query: 263 GEIFSWGEESGGRLG-HG------------------------READVSHPQLIEILSGVN 297
           G  ++WG    GRLG HG                            V  P+++E L G  
Sbjct: 204 GSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYF 263

Query: 298 VELVACGEYHTCAV----TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +  VACG YH+  +         L+T G G   +G LGHG +    +P  V   L+ +++
Sbjct: 264 IADVACGPYHSAFLGIYEQDRTSLFTCGLGL--NGRLGHGDEEDRHLPTAVHA-LENVNI 320

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVE-TLRGLRTTRVSCG 411
           + I+CG  HTA VTSAG L+T+G  +FG LG G    S  +P+ V   LR      V+ G
Sbjct: 321 TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALG 380

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----------------------- 448
             H+A V              T+ G+L+TWG G +G                        
Sbjct: 381 SQHSACV--------------TTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFAE 426

Query: 449 -----------LGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVAL 484
                      LGHGD E P   P C+  L  + + Q++C    +VA 
Sbjct: 427 TPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 166/342 (48%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  + T   ++F +G  + G+LG G +A V+ P  I+ L    V+ VACG  HT
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             +T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 126 LVLTGGGKVYATGGN--NEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTE 183

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P +V    G   + +SCG +H+A V          
Sbjct: 184 DGELFMWGDNSEGQIGLQNITNMCVPHQVTV--GKPISWISCGYYHSAFV---------- 231

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-----PECVAPLIDENICQVACGHDLSVA 483
               T+ G+L+T+G+ + G+LG     P+L      P+ V P I E + QVACG   +V 
Sbjct: 232 ----TTEGELYTFGEPESGKLG---LPPKLLVNHKVPQLV-PGISEKVIQVACGGGHTVV 283

Query: 484 LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           LT    VYT G   +GQLG+          +V   + +  +  V CG  H A +T +  +
Sbjct: 284 LTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLL 342

Query: 543 YTWGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
           YT+G G +G+LG G ++  N+  PTL  +FLK   V  V CG
Sbjct: 343 YTFGDGRHGKLGLGMENFANQFLPTLCSNFLK-YIVHLVACG 383



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT   T +  L+ +G  + N G LG GSK +   P  +   L    + +++CG 
Sbjct: 66  LSCGDEHTAITTGNNKLFMFG--SNNWGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGR 122

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V+T  G ++  G  + G LG GD                R+       + +   + 
Sbjct: 123 NHTLVLTGGGKVYATGGNNEGQLGLGD-------------TDERSAFHLISFFTSQHKIK 169

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P  V   + + I  ++CG+  
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVT--VGKPISWISCGYYH 227

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +YT G    G+LG+P   + +  VP  V G I+E  ++ VACG  H   LT
Sbjct: 228 SAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQ-VACGGGHTVVLT 285

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ +KDK++  V CG N TA+I
Sbjct: 286 EKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 336



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  +++     V  +ACG  H +++T  G++++ G  + G+LG G   + S   LI   +
Sbjct: 104 PTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFT 163

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P +V+    G  +
Sbjct: 164 SQHKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLQNITNMCVPHQVTV---GKPI 218

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG      ++  +P+ V  +   +  +V+CG
Sbjct: 219 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGI-SEKVIQVACG 277

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPL 466
             HT   VV T+ +            ++T+G G  G+LG G       EP++    +  +
Sbjct: 278 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGTFTFETSEPKV----IESV 318

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ I  V CG + +  +T SG +YT G   +G+LG+ +   A+  +PT       +  V
Sbjct: 319 KDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSN-FLKYIV 377

Query: 524 EEVACGAYHVAALTS 538
             VACG  H+    +
Sbjct: 378 HLVACGGCHMLVFAT 392



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 18/188 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P  V  T+   +  I+CG  H+  VT
Sbjct: 185 GELFMWGDN--------SEGQIG--LQNITNMCVPHQV--TVGKPISWISCGYYHSAFVT 232

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG   +  V+H  PQL+  +S   ++ VACG  HT  +T    +Y
Sbjct: 233 TEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGGHTVVLTEKA-VY 290

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+        KV  ++    +S++ CG  HTA++T +G L+TFGDG
Sbjct: 291 TFGLGQF--GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLLYTFGDG 348

Query: 379 SFGALGHG 386
             G LG G
Sbjct: 349 RHGKLGLG 356



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 27/224 (12%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +  +G +FTFG   F         + +IP +    + +  + +SCG  HTA         
Sbjct: 34  IEDSGAVFTFGKTKF---------AENIPSKFWFKKDIPIS-LSCGDEHTAI-------- 75

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                 +T   KLF +G  + G+LG G K     P C+  L  E +  VACG + ++ LT
Sbjct: 76  ------TTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLVLT 129

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G VY  G    GQLG+   D       +    ++  +++++ G+   AALT   +++ 
Sbjct: 130 GGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFM 189

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           WG  + GQ+G  +  N   P  V     K +  + CG   +A +
Sbjct: 190 WGDNSEGQIGLQNITNMCVPHQVTV--GKPISWISCGYYHSAFV 231


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 188/395 (47%), Gaps = 41/395 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-----------PKAVESTMALDVHNIAC 251
           +F WG G A+G LGGG   +    S   + LL           P  +++  +     I+C
Sbjct: 50  LFSWGRG-ASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H+ L T  G+++ WG+  GGRLG G+E  V  P L  +    ++  +A G  H+ A+
Sbjct: 109 GLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T  GD++TWG G +  G LGH       +PR V G+ D   +S I+    HTA +T +G 
Sbjct: 168 THQGDVFTWGYGGF--GALGHKVYTRELVPRCVDGSWD-CKISAIATSGTHTAAITESGE 224

Query: 372 LFTFG-------DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           L+ +G        G     G  +    S+P +V+ L  +    VSCG + T A+      
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMAL------ 277

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T  G+L+ WG      LG GD      P  V  L    I Q+ACG   S+AL
Sbjct: 278 --------TKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLAL 329

Query: 485 TTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T  G V + G   +GQLG   + +  +PT ++  +A+  +  +ACG    AA+T   +++
Sbjct: 330 TKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIE-ALADKKIVFIACGGSSSAAITDGGELW 388

Query: 544 TWGKGANGQLG-HGDKDNRNSPTLVDFLKDKQVKR 577
            WG   + QLG  G  + + +P  V+FL ++  ++
Sbjct: 389 MWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQ 423



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 175/407 (42%), Gaps = 44/407 (10%)

Query: 150 DSVSFSPSPLTNAFPDNSNDRSSAAETFRISL--SSVVSSSSHGSAHEDFDSLGDVFIWG 207
           + +   PSP+ N    +    S A    RI    SS     S G  H      GD++IWG
Sbjct: 66  EEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISCGLFHSGLTIDGDLWIWG 125

Query: 208 EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFS 267
           +G   G LG         F ++    +P          +  IA G  H+V +T QG++F+
Sbjct: 126 KG-DGGRLG---------FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFT 175

Query: 268 WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG------ 321
           WG    G LGH        P+ ++      +  +A    HT A+T SG+LY WG      
Sbjct: 176 WGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGDG 235

Query: 322 -DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             G         G  +S  +P KV      + ++ +SCG + T  +T  G L+ +G  S 
Sbjct: 236 RLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSN 291

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
             LG GD++    P  V +L  +R T+++CG +H+ A+              T  GK+ +
Sbjct: 292 YELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLAL--------------TKEGKVLS 337

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG G  G+LG+     +  P  +  L D+ I  +ACG   S A+T  G ++  G+A   Q
Sbjct: 338 WGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQ 397

Query: 501 LGVPVADGLVPTRV-------DGEIAESFVEEVACGAYHVAALTSTS 540
           LGVP    +  T V       + E     V  V+ GA H   L S S
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHALCLVSRS 444



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 164/361 (45%), Gaps = 64/361 (17%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQ--------------LIEILSGVNVEL------VAC 303
           ++FSWG  + G+LG G E    +P               L +    ++ E       ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY----ISCG 359
           G +H+  +T  GDL+ WG G  + G LG G + S ++P     NL+ +   +    I+ G
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-----NLNPLFEEHSIRCIALG 160

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +T  G +FT+G G FGALGH  +    +PR V+     + + ++    HTAA+ 
Sbjct: 161 GLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAI- 219

Query: 420 VATDSSSSSPSGSTSCGKLFTWG--DGDKGRL---------GHGDKEPRLFPECVAPLID 468
                        T  G+L+ WG  +GD             G G   P        P   
Sbjct: 220 -------------TESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP--- 263

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVA 527
             +  V+CG   ++ALT  G ++  G+ +  +LG      G  P  V   +    + ++A
Sbjct: 264 --VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVP-SLDSVRITQIA 320

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CG YH  ALT   KV +WG G +GQLG+    N+  PT ++ L DK++  + CG + +A 
Sbjct: 321 CGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAA 380

Query: 588 I 588
           I
Sbjct: 381 I 381


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 162/375 (43%), Gaps = 75/375 (20%)

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           +++ P+L++ L  +N E V+ G      V  SG+LY W  G  + G LG G +    +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMW--GANSEGQLGTGDRRDASVPR 177

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTS--------- 392
            V   L G  +  ++C   HT      G  + +G    G LG HG  I +S         
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 393 ---------------IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
                           PR +E+L G     V+CG +H+A + +     +S          
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTS---------- 286

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           LFT G G  GRLGHGD+E R  P  V  L + NI  +ACG   +  +T++G +YT G AA
Sbjct: 287 LFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAA 346

Query: 498 YGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ--- 552
           +G+LG+    G  L+P  V G +    V  VA G+ H A +T+  ++YTWG+G  G    
Sbjct: 347 FGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTR 406

Query: 553 -------------------------------LGHGDKD-NRNSPTLVDFLKDKQVKRVVC 580
                                          LGHGD +   N P  +  L  K V ++ C
Sbjct: 407 FFRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSC 466

Query: 581 GLNFTAIICLHKWVS 595
              FT   C  + VS
Sbjct: 467 ASTFTVAFCDPQRVS 481



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 166/408 (40%), Gaps = 93/408 (22%)

Query: 143 ANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGD 202
           A T    +S SFS SP    F + S + +S      +   +    S+ G         G+
Sbjct: 94  AATPLGGESSSFSASPALAVFAETSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGE 153

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +++WG   + G LG G+ R         DA +P+ V++     V  +AC   H V     
Sbjct: 154 LYMWGAN-SEGQLGTGDRR---------DASVPRLVKALHGKVVKAVACSQEHTVCCLDD 203

Query: 263 GEIFSWGEESGGRLG-HG------------------------READVSHPQLIEILSGVN 297
           G  ++WG    GRLG HG                            V  P+++E L G  
Sbjct: 204 GSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYF 263

Query: 298 VELVACGEYHTCAV----TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +  VACG YH+  +         L+T G G   +G LGHG +    +P  V   L+ +++
Sbjct: 264 IADVACGPYHSAFLGIYEQDRTSLFTCGLGL--NGRLGHGDEEDRHLPTAVHA-LENVNI 320

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVE-TLRGLRTTRVSCG 411
           + I+CG  HTA VTSAG L+T+G  +FG LG G    S  +P+ V   LR      V+ G
Sbjct: 321 TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALG 380

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR----------------------- 448
             H+A V              T+ G+L+TWG G +G                        
Sbjct: 381 SQHSACV--------------TTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFAE 426

Query: 449 -----------LGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVAL 484
                      LGHGD E P   P C+  L  + + Q++C    +VA 
Sbjct: 427 TPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 176/371 (47%), Gaps = 33/371 (8%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMALDVHNIACGARHAVLVTK 261
           +F WG    NG LG G          + D +L PK         +  ++CG +H V V  
Sbjct: 1   MFCWGAA-RNGELGLG--------GIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLA 51

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +G +++ G    G+LG  ++     P +I  L   +++ V+CG+YH   V     +++WG
Sbjct: 52  EGTVYTCGSNDYGQLG--QDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109

Query: 322 DGTYNSGLLGHGSKV---SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
               + G LGH  +    +   PR V   L  + +  ++CG  H+  +++ G +F++G+ 
Sbjct: 110 YD--DCGQLGHTLEAGGNNSRRPRMVK-ELSSLQIVQVACGGKHSLALSNDGRIFSWGNN 166

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           S G LG G   +   P+E+ +L G+   ++  G  H+  +              +  G +
Sbjct: 167 SHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVL--------------SKSGAV 212

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           F +G    G+LG GD   R +P  V  L    +  ++CG + +  LT  G V T G+ +Y
Sbjct: 213 FGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSY 272

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG    +     R   E+    V ++ACG  H +A + S+ ++Y++G G NGQLG   
Sbjct: 273 GQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKG 332

Query: 558 KDNRNSPTLVD 568
             N N+P  VD
Sbjct: 333 TTNCNTPITVD 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 146/325 (44%), Gaps = 30/325 (9%)

Query: 265 IFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +F WG    G LG G   E  +  P+     +   +  V+CG  HT  V   G +YT G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 323 GTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             Y  G LG   G K    I       LD   +  +SCG +H  VV     +F++G    
Sbjct: 61  NDY--GQLGQDKGHKRPTVITA-----LDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDC 113

Query: 381 GALGHGDHI---STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G LGH       ++  PR V+ L  L+  +V+CG  H+ A+              ++ G+
Sbjct: 114 GQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLAL--------------SNDGR 159

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F+WG+   G+LG G  + +  P+ +  L     CQ+  G   S  L+ SG V+  G   
Sbjct: 160 IFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNT 219

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           +GQLG+    D   PT V   +    V  ++CG  H A LT    V T+G G+ GQLGH 
Sbjct: 220 FGQLGLGDTGDRKYPTHVK-SLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHN 278

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++   P  V  L   +V ++ CG
Sbjct: 279 SNNHEALPRKVFELMGLEVTQLACG 303



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 25/241 (10%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +SCG  HT  V + G ++T G   +G LG         P  +  L      +VSCG +H 
Sbjct: 39  VSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDK--GHKRPTVITALDTQSIQQVSCGDYHN 96

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH-----GDKEPRLFPECVAPLIDEN 470
              +V  D             ++F+WG  D G+LGH     G+   R  P  V  L    
Sbjct: 97  ---LVVNDKY-----------QVFSWGYDDCGQLGHTLEAGGNNSRR--PRMVKELSSLQ 140

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACG 529
           I QVACG   S+AL+  G +++ G+ ++GQLG+    +   P  +       F + VA G
Sbjct: 141 IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGG 200

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           + H   L+ +  V+ +G+   GQLG GD  +R  PT V  L+  +V  + CG   TA++ 
Sbjct: 201 S-HSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLT 259

Query: 590 L 590
           L
Sbjct: 260 L 260



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D   P  V+S  +L V +I+CG  H  ++T  G + ++G  S G+LGH      + P+ +
Sbjct: 230 DRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKV 289

Query: 291 EILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
             L G+ V  +ACG  HT A V  SG +Y++G G   +G LG     +C  P  V G
Sbjct: 290 FELMGLEVTQLACGRMHTMAYVESSGRIYSFGLG--GNGQLGSKGTTNCNTPITVDG 344


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 135/261 (51%), Gaps = 26/261 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IACG  H +++ +  +++S+G    G LG+    DV  PQ + +     V+ VACG  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKF-VQ-VACGATHS 83

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T SG +++WG      G LGHG++  C  P++V  N   I   YI CG  H+A V+ 
Sbjct: 84  LALTISGIIFSWGKNL--RGQLGHGNQNDCLKPKEVIQN--DIIAEYIDCGDQHSAFVSK 139

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
              L+T+G+G +  LGHG      IP++V  L     T VSCG+ HT  V          
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIV---------- 189

Query: 429 PSGSTSCGKLFTWGDGDKGRLG-HGDKEPRLFPECVAPLI-----DENICQVACGHDLSV 482
               T  G ++ WGDG  G+LG   D + +  P  V  +      ++   QVA G   S+
Sbjct: 190 ----TGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSL 245

Query: 483 ALTTSGHVYTMGSAAYGQLGV 503
           AL+T+G ++T GS+  G LG+
Sbjct: 246 ALSTNGQIFTWGSSKSGNLGI 266



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 29/273 (10%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +ACG +HT  +  +  LY++G G   +GLLG+       IP++++     +    ++CG 
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGK--TGLLGNEHLEDVKIPQQLNLKQKFVQ---VACGA 80

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  +T +G +F++G    G LGHG+      P+EV     +    + CG  H+A V  
Sbjct: 81  THSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQHSAFV-- 137

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       +   +L+TWG+G   RLGHG     L P+ V  L D  +  V+CG + 
Sbjct: 138 ------------SKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNH 185

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVE-----EVACGAYHV 533
           ++ +T  G VY  G   YG+LGV        +PTRV G I + F +     +VA G+ H 
Sbjct: 186 TLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRV-GMICKKFRKNKMYYQVAAGSMHS 244

Query: 534 AALTSTSKVYTWGKGANGQLGHG-DKDNRNSPT 565
            AL++  +++TWG   +G LG G +KD ++  T
Sbjct: 245 LALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYT 277



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 34/254 (13%)

Query: 205 IWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGE 264
           ++  G+    L G EH       +Q + L  K V+         +ACGA H++ +T  G 
Sbjct: 42  LYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKFVQ---------VACGATHSLALTISGI 91

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           IFSWG+   G+LGHG + D   P+ + I + +  E + CG+ H+  V+++ +LYTWG+G 
Sbjct: 92  IFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQHSAFVSKNKELYTWGNGQ 150

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
           Y    LGHG      IP+KV   L+  +++++SCG+ HT +VT  G ++ +GDG +G LG
Sbjct: 151 YYR--LGHGVTTDELIPKKVVV-LEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLG 207

Query: 385 HGDHIST-SIPREVETL-RGLRTTR----VSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +   T ++P  V  + +  R  +    V+ G  H+ A+              ++ G++
Sbjct: 208 VSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL--------------STNGQI 253

Query: 439 FTWGDGDKGRLGHG 452
           FTWG    G LG G
Sbjct: 254 FTWGSSKSGNLGIG 267



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 18/191 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F WG+ +  G LG G          Q D L PK V     +  + I CG +H+  V+
Sbjct: 90  GIIFSWGKNLR-GQLGHG---------NQNDCLKPKEVIQNDIIAEY-IDCGDQHSAFVS 138

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K  E+++WG     RLGHG   D   P+ + +L    V  V+CG  HT  VT  G +Y W
Sbjct: 139 KNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAW 198

Query: 321 GDGTYNSGLLGHGSKVSCW-IPRKVS---GNLDGIHLSY-ISCGLWHTAVVTSAGHLFTF 375
           GDG Y  G LG         +P +V           + Y ++ G  H+  +++ G +FT+
Sbjct: 199 GDGMY--GKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTW 256

Query: 376 GDGSFGALGHG 386
           G    G LG G
Sbjct: 257 GSSKSGNLGIG 267



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           +E+E L+      ++CG  HT  +    D ++          +L+++G G  G LG+   
Sbjct: 14  QELE-LQDKEIIYIACGHHHTLII----DENN----------QLYSFGMGKTGLLGNEHL 58

Query: 455 EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTR 513
           E    P+ +   + +   QVACG   S+ALT SG +++ G    GQLG     D L P  
Sbjct: 59  EDVKIPQQLN--LKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKE 116

Query: 514 VDGEIAESFVEE-VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           V   I    + E + CG  H A ++   ++YTWG G   +LGHG   +   P  V  L+D
Sbjct: 117 V---IQNDIIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLED 173

Query: 573 KQVKRVVCGLNFTAII 588
             V  V CG+N T I+
Sbjct: 174 YYVTHVSCGMNHTLIV 189



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 69/342 (20%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-----VSHPQLIEILSGVNVELVAC 303
            ACG+    +   Q  I S   +   +  +  E D      + P  I+      +  ++C
Sbjct: 376 FACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYISC 435

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
              H  A+++ G  Y WG   Y    +G+    + +IP+K+ G L+   +   +C    +
Sbjct: 436 SYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYN-YIPQKLQGILETKTIIMSACSDKFS 494

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T  G ++TFG    G LGH +     +P         +   ++CG            
Sbjct: 495 ALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACG------------ 542

Query: 424 SSSSSPSGSTSCG----KLFTWGDGDKGRLG-----------------HGDKE--PRLFP 460
                P G  S      +L+ WG+   G+LG                 +G ++   ++ P
Sbjct: 543 -----PQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKP 597

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY-GQLGV-------PVADGLVPT 512
           E V       I  V  G   SVA+  +G +Y+ G   Y GQ  V        + D  +  
Sbjct: 598 EEVQ------IKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILI 651

Query: 513 RVDGEIAESFVEEVACGAYHVAALT--------STSKVYTWG 546
           R +    + F+ +V+C  YH  AL+        +   VY WG
Sbjct: 652 RTNELQNQQFI-QVSCSEYHTLALSIQEQGEEQAQQYVYAWG 692



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 92/439 (20%), Positives = 175/439 (39%), Gaps = 52/439 (11%)

Query: 191 GSAHEDFDSLG-DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           G  H  F S   +++ WG         G  +R+G+  +  TD L+PK V       V ++
Sbjct: 130 GDQHSAFVSKNKELYTWG--------NGQYYRLGHGVT--TDELIPKKVVVLEDYYVTHV 179

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV-SHPQLIEIL-----SGVNVELVAC 303
           +CG  H ++VT +G +++WG+   G+LG   +    + P  + ++            VA 
Sbjct: 180 SCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAA 239

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLD-GIHLSYISCGL 360
           G  H+ A++ +G ++TWG     +  +G+   +  +   P+K+S  L+   +L + S   
Sbjct: 240 GSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFFSLQY 299

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVV 419
           +   +                     D+I       ++  L  +    +  G     + +
Sbjct: 300 YQAELNNKLTKAKNNNKNQINLNDSLDNIEVIQFKIDMYPLYIIDKQLIQRG---PPSNI 356

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKG-RLGHG-------------------DKEPRLF 459
           +   +S ++     + G++F  G   KG +L                      D +   F
Sbjct: 357 IFCQASQNNSFFLANNGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDF 416

Query: 460 --PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA--DGLVPTRVD 515
             P  +    +  I  ++C +  ++A++  G  Y  G   Y QLGV  +     +P ++ 
Sbjct: 417 NRPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQ 476

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR--NSPTLVDFLKDK 573
           G +    +   AC     A LT   +V+T+G    G LGH +K+      P +V+ +   
Sbjct: 477 GILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDI--P 534

Query: 574 QVKRVVCGLNFTAIICLHK 592
           Q+  + CG      I  HK
Sbjct: 535 QMIYIACGPQGMVSISAHK 553



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/400 (20%), Positives = 154/400 (38%), Gaps = 87/400 (21%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIE-ILSGVNVELVAC 303
           +  I+C   HA+ ++++G+ + WG+    +LG G   + ++ PQ ++ IL    + + AC
Sbjct: 430 IRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSAC 489

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            +  +  +T  G+++T+  GT + G+LGH  K    +P     N D   + YI+CG    
Sbjct: 490 SDKFSALLTDKGEVWTF--GTSDCGVLGHQEKNYYVVPEPKMVN-DIPQMIYIACG--PQ 544

Query: 364 AVVTSAGH---LFTFGDGSFGALG-----------HGDHISTSIPREVETLR--GLRTTR 407
            +V+ + H   L+ +G+  +G LG             D       +  E ++   ++   
Sbjct: 545 GMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKS 604

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECVAPL 466
           V  G++H+ A+         +     SCG     G  +   +      + +        L
Sbjct: 605 VDMGMFHSVAI--------DNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIRTNEL 656

Query: 467 IDENICQVACGHDLSVALTT--------SGHVYTMGSAAYGQL----------------- 501
            ++   QV+C    ++AL+           +VY  G    G L                 
Sbjct: 657 QNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQDIVKYYQQLKQ 716

Query: 502 ----------------------GVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAA 535
                                  + +    + T  D EI   F    ++ V+ G +H  A
Sbjct: 717 KPQKSQDLNKYISQKQILLPPTNISLIQKFILTNPDREIINEFYKKSIKYVSAGIFHNIA 776

Query: 536 LTSTSKVYTWGKGANGQLG----HGDKDNRNSPTLVDFLK 571
           + S  K + WG   NG+LG      +   +N PT V  ++
Sbjct: 777 IGSDGKCFVWGSFQNGKLGLVVNKQNSKTQNCPTYVPIIQ 816



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 5/128 (3%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVE 524
           L D+ I  +ACGH  ++ +  +  +Y+ G    G LG   + D  +P +++  + + FV 
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN--LKQKFV- 74

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           +VACGA H  ALT +  +++WGK   GQLGHG++++   P  V    D   + + CG   
Sbjct: 75  QVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQH 133

Query: 585 TAIICLHK 592
           +A +  +K
Sbjct: 134 SAFVSKNK 141



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 23/167 (13%)

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P +++  +      +SC   H  A+              +  G+ + WG     +LG G 
Sbjct: 419 PFQIQYFKNNIIRYISCSYLHAIAI--------------SQKGQAYVWGKNIYYQLGVGY 464

Query: 454 K-EPRLFPECVAPLID-ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV- 510
                  P+ +  +++ + I   AC    S  LT  G V+T G++  G LG    +  V 
Sbjct: 465 SCNYNYIPQKLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVV 524

Query: 511 --PTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLG 554
             P  V+ +I +     +ACG   + ++++  + +Y WG    GQLG
Sbjct: 525 PEPKMVN-DIPQMIY--IACGPQGMVSISAHKRQLYAWGNNIYGQLG 568


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 41/346 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H  +VT  G+++ +G  + G+LG G +  VS P  ++ L     +L  CG  HT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G++Y  G  +   G LG G          +S   +   +  ++ G + +A VT 
Sbjct: 95  LVYTEKGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTE 152

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D    S+P +V+   G   + +SCG +H+A +          
Sbjct: 153 DGQLFVWGDNSEGQIGLADEACVSVPCQVDV--GKPVSSISCGYYHSALI---------- 200

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV--------APLIDENICQVACGHDL 480
               T  G+L+T+G+ + G+LG       L PE +         P I E + +VACG + 
Sbjct: 201 ----TGDGELYTFGEPENGKLG-------LLPEQLKNNRVPQPVPGIMEKVNKVACGGEH 249

Query: 481 SVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           +V LT +  VYT G   YGQL  G  + +  VP  V   +    +  + CG  H A +  
Sbjct: 250 TVVLTET-DVYTFGLGQYGQLGHGTFIFETSVPKSVK-HLRRHKICNITCGENHTAVVAE 307

Query: 539 TSKVYTWGKGANGQLGHGDKD--NRNSPTL-VDFLKDKQVKRVVCG 581
              ++T+G G +G+LG G+++  N+  PTL  +FL+   V  V CG
Sbjct: 308 NGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLR-FTVLLVACG 352



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 140/294 (47%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           L++CG+ HT  VT +G LY +  G+ N G LG GSK +   P  V   L         CG
Sbjct: 34  LISCGDEHTAIVTGNGKLYMF--GSNNWGQLGLGSKNTVSKPTCVKA-LKPEKTKLAVCG 90

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAV 418
             HT V T  G+++  G  S G LG GD    S    +       +  +++ G + +AAV
Sbjct: 91  RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAV 150

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G+LF WGD  +G++G  D+     P  V   + + +  ++CG+
Sbjct: 151 --------------TEDGQLFVWGDNSEGQIGLADEACVSVPCQVD--VGKPVSSISCGY 194

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +T  G +YT G    G+LG+    + +  VP  V G + +  V +VACG  H   
Sbjct: 195 YHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVV 252

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           LT T  VYT+G G  GQLGHG      S P  V  L+  ++  + CG N TA++
Sbjct: 253 LTETD-VYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVV 305



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 22/219 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G +     +A +    +  +   V +I+CG  H+ L+T
Sbjct: 154 GQLFVWGDN--------SEGQIGLA----DEACVSVPCQVDVGKPVSSISCGYYHSALIT 201

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  + + ++ + + G+   V  VACG  HT  +T + D+Y
Sbjct: 202 GDGELYTFGEPENGKLGLLPE-QLKNNRVPQPVPGIMEKVNKVACGGEHTVVLTET-DVY 259

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           T+G G Y  G LGHG+ +    +P+ V  +L    +  I+CG  HTAVV   G +FTFGD
Sbjct: 260 TFGLGQY--GQLGHGTFIFETSVPKSVK-HLRRHKICNITCGENHTAVVAENGLMFTFGD 316

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTT--RVSCGVWH 414
           G  G LG G+   T+          LR T   V+CG  H
Sbjct: 317 GRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 219/515 (42%), Gaps = 98/515 (19%)

Query: 179  ISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
            I L + + S + G+ H    ++ G V+ WG G A G LG G      S + + + +  K 
Sbjct: 1123 IGLRNAIVSIACGANHTLVTTVDGCVYSWGMG-AYGVLGTG------SVANRYNPV--KV 1173

Query: 238  VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
            V  +  + +     G+RH++ + K+G ++SWG    GRLG G   +   P LI I     
Sbjct: 1174 VFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYE 1233

Query: 298  VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
            V  ++CG+ H+  + R G +YTW  G    G LG G  VS  +   V  +L G H+  I+
Sbjct: 1234 VFQISCGDSHSACLDRFGTVYTW--GCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIA 1291

Query: 358  CGLWHTAVVTSAGHLFT------FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            CG  +T  ++++G ++       F   S G + + D++   +P       G +   ++ G
Sbjct: 1292 CGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPDT-----GFKNVFIAAG 1346

Query: 412  VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----- 466
             +  AA+ +               G L TWG G   RLGHGD +  + P+ V+ L     
Sbjct: 1347 PYSCAAINI--------------FGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIY 1392

Query: 467  ID---------------------------ENICQVACGHDLSVALTTSGHVYTMG---SA 496
            ID                           + I Q+A G    V LT +G VYT G     
Sbjct: 1393 IDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGT 1452

Query: 497  AYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
             Y      +     P   +     S + ++ACG+ H  A+T    ++TWG   NGQLG G
Sbjct: 1453 GYNSTKDQIESYSEPMLFNH--FSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQG 1510

Query: 557  DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHS--VCSSCHNPFGFRRK 614
            D  +R  P  V ++++                C++ + + VD+S  +CSS H  F     
Sbjct: 1511 DLRSRVIPDHVPYIEN----------------CINVF-AGVDNSGCICSSNHEDF----- 1548

Query: 615  RHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
              + Y    VF  +   +  L  AL  ++  P  +
Sbjct: 1549 MKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREI 1583



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 166/373 (44%), Gaps = 54/373 (14%)

Query: 235  PKAVESTMALDVHNIACGARH-AVLVT--KQ----GEIFSWGEESGGRLGHGRE--ADV- 284
            PK +       +  +ACG  H AVLV+  KQ    G +F++G  + GRLG+  +  +DV 
Sbjct: 1038 PKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVL 1097

Query: 285  ---------------SH-PQLIEILSGVNVELV--ACGEYHTCAVTRSGDLYTWGDGTYN 326
                           +H PQ + +  G+   +V  ACG  HT   T  G +Y+WG G Y 
Sbjct: 1098 SQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWGMGAY- 1156

Query: 327  SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
             G+LG GS  + + P KV    D I +S    G  H+  +   G+++++G G  G LG G
Sbjct: 1157 -GVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLG 1215

Query: 387  DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
               +   P  +         ++SCG  H+A +                 G ++TWG    
Sbjct: 1216 STRNYYTPNLIRIFDTYEVFQISCGDSHSACL--------------DRFGTVYTWGCCRG 1261

Query: 447  GRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY----TMGSAAYGQL 501
            G+LG G      L P  V  L   +I Q+ACG   ++AL+ SG +Y    T+G     + 
Sbjct: 1262 GKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCTLGFNKQSE- 1320

Query: 502  GVPVADGLVPTRV-DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            G+      VP  V D      F+   A G Y  AA+     + TWG G   +LGHGD  +
Sbjct: 1321 GLISNIDYVPQPVPDTGFKNVFI---AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKD 1377

Query: 561  RNSPTLVDFLKDK 573
              +P  V  L+ +
Sbjct: 1378 HVAPKFVSHLRTR 1390



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 51/326 (15%)

Query: 252  GARHAVLVTKQGEIFSWGEESGGRLGHGREADVS-HPQLIEILSGVNVELVACGEYHTCA 310
            GA+H V       ++SWG+     LG G +   S +P++I   SG  +  VACG+YH+  
Sbjct: 1005 GAKHTV---SHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAV 1061

Query: 311  VTRS-------GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY-------- 355
            +  S       G ++T+G G  NSG LG+    +  +  +  G  D    S+        
Sbjct: 1062 LVSSSKQHPNAGTVFTFGLG--NSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPV 1119

Query: 356  ------------ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP-REVETLRG 402
                        I+CG  HT V T  G ++++G G++G LG G   +   P + V     
Sbjct: 1120 GLSIGLRNAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDN 1179

Query: 403  LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
            +  ++   G  H+ A+                 G +++WG G  GRLG G       P  
Sbjct: 1180 IFISKCCAGSRHSMAL--------------DKEGNVWSWGYGGNGRLGLGSTRNYYTPNL 1225

Query: 463  VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAE 520
            +       + Q++CG   S  L   G VYT G    G+LG+   V+D L P  V+  +  
Sbjct: 1226 IRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVES-LKG 1284

Query: 521  SFVEEVACGAYHVAALTSTSKVYTWG 546
            + + ++ACG  +  AL+++ K+Y WG
Sbjct: 1285 THIIQIACGTGNTLALSASGKIYQWG 1310



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 32/246 (13%)

Query: 371  HLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            +++++G   F  LG G  +STS  P+ +    G +  +V+CG +H+A +V    SS   P
Sbjct: 1014 NVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLV---SSSKQHP 1070

Query: 430  SGSTSCGKLFTWGDGDKGRLGH---------------GDK-EPRLFPECVAPL-----ID 468
            +     G +FT+G G+ GRLG+                DK EP        P+     + 
Sbjct: 1071 NA----GTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLR 1126

Query: 469  ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVA 527
              I  +ACG + ++  T  G VY+ G  AYG LG   VA+   P +V       F+ +  
Sbjct: 1127 NAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCC 1186

Query: 528  CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
             G+ H  AL     V++WG G NG+LG G   N  +P L+      +V ++ CG + +A 
Sbjct: 1187 AGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSA- 1245

Query: 588  ICLHKW 593
             CL ++
Sbjct: 1246 -CLDRF 1250



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 187/468 (39%), Gaps = 129/468 (27%)

Query: 200  LGDVFIWGEGIANGF-LGGGEHR-------VGYSFSR-QTDALLPKAVESTMALD----- 245
             GD+  WG G   G+ LG G+ +       V +  +R   D LL    E+ M L      
Sbjct: 1356 FGDLLTWGLG--TGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKA 1413

Query: 246  ----------VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD----VSHPQLIE 291
                      +  IA G  H VL+T  G +++WG  +G   G+    D     S P L  
Sbjct: 1414 GATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGT--GYNSTKDQIESYSEPMLFN 1471

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
              S   +  +ACG  H+ A+T +G L+TW  G  ++G LG G   S  IP  V    + I
Sbjct: 1472 HFSS-KISKIACGSNHSLAITVNGLLFTW--GCNDNGQLGQGDLRSRVIPDHVPYIENCI 1528

Query: 352  HLSYISCGLWHTAVVTSAGH----------LFTFGDGSFGALGHGDHISTSI--PREVET 399
            +   +  G+ ++  + S+ H          L+ FG  S G LG G+ +++++  PRE+ T
Sbjct: 1529 N---VFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITT 1585

Query: 400  LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK----- 454
            + G+   +++ G  H+  +              T  G L++ G G  GRLG GD      
Sbjct: 1586 VTGVY--KLALGTMHSVVL--------------THEGSLYSAGAGTGGRLGTGDTSNYFV 1629

Query: 455  ----------------------------------------------EPRLFPECVAPLID 468
                                                          EP L     +P  +
Sbjct: 1630 FTPVKTEVKFVDVCAGSSHSLAISVDNELYGWGEGKYICSDEKHVLEPTLMEVIPSPTGE 1689

Query: 469  ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-----ADGLV--PTRVDGEIAES 521
              +       + S+ LT SG+V   G+  YGQLGV +     A+  +  P+ V+    ++
Sbjct: 1690 AKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVN---LDA 1746

Query: 522  FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR--NSPTLV 567
             V  +A   Y  +  T     Y+WG  ++ +LG G  +N+   +PT +
Sbjct: 1747 NVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNKVVYAPTTI 1794


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++DV  P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             +T  G++Y  G    N G LG G         ++S      ++  +S G   +A ++ 
Sbjct: 100 LILTVVGNVYAAGGN--NEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D IS  +P +V    G   + +SCG +H+A V          
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVNI--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
               T  G+L+T+G+ + G+LG   KE  +    P+ VA  I E + QVACG   +V LT
Sbjct: 206 ----TMDGELYTFGEPESGKLGL-PKELLINHRTPQLVAG-IPEKVIQVACGGGHTVVLT 259

Query: 486 TSGHVYTMGSAAYGQLGVPV--ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
               VYT G   +GQLG+     + L P  ++ +I    +  ++CG  H A ++    +Y
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFCFETLEPKVIE-QIKNQKITYISCGENHTALISDIGLMY 317

Query: 544 TWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           T+G G +G+LG G ++  N+  P L        V+ V CG
Sbjct: 318 TFGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACG 357



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 145/293 (49%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +  LY +G  + N G LG GSK     P  V   L    + + +CG 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSDVKKPTCVKA-LKPEKVQFAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT ++T  G+++  G  + G LG GD        E  T       R+S   + T+   +
Sbjct: 97  NHTLILTVVGNVYAAGGNNEGQLGLGDT------EERNTFH-----RIS---FFTSEHNI 142

Query: 421 ATDSSSSSPSGSTS-CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
              S+ S+ S + S  G+LF WGD  +G++G  D      P  V   I + I  ++CG+ 
Sbjct: 143 KQLSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVN--IGKPISWISCGYY 200

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +T  G +YT G    G+LG+P   + +   P  V G I E  ++ VACG  H   L
Sbjct: 201 HSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAG-IPEKVIQ-VACGGGHTVVL 258

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRN-SPTLVDFLKDKQVKRVVCGLNFTAII 588
           T  + VYT+G G  GQLG G        P +++ +K++++  + CG N TA+I
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALI 310



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 155/317 (48%), Gaps = 45/317 (14%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSH 286
           ++D   P  V++     V   ACG  H +++T  G +++ G  + G+LG G   E +  H
Sbjct: 72  KSDVKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFH 131

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
            ++    S  N++ ++ G   + A++  G L+ WGD +   G +G    +S  +P +V+ 
Sbjct: 132 -RISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDNS--EGQIGLNDVISVCVPHQVN- 187

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV-------ET 399
              G  +S+ISCG +H+A VT  G L+TFG+   G LG        +P+E+       + 
Sbjct: 188 --IGKPISWISCGYYHSAFVTMDGELYTFGEPESGKLG--------LPKELLINHRTPQL 237

Query: 400 LRGL--RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EP 456
           + G+  +  +V+CG  HT   VV T+ +            ++T+G G  G+LG G     
Sbjct: 238 VAGIPEKVIQVACGGGHT---VVLTEKA------------VYTFGLGQFGQLGLGTFCFE 282

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTR 513
            L P+ +  + ++ I  ++CG + +  ++  G +YT G   +G+LG+ +   ++   P  
Sbjct: 283 TLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPIL 342

Query: 514 VDGEIAESFVEEVACGA 530
              E     V+ VACG 
Sbjct: 343 C-SEFLRFTVQLVACGG 358


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 166/315 (52%), Gaps = 26/315 (8%)

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
           T  +++   A G  H++L+     ++S G+ S G+LG  R+     P+ I+ L+ ++V+L
Sbjct: 19  TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDL 78

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCG 359
           V+CG+ H+ AV   G ++ WG G+   G LG G  K   ++P K+   L GI +  +SCG
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGS--EGQLGIGEFKEISFMPTKIKA-LAGIKIIQVSCG 135

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAV 418
            +H+  ++  GH+F++G  S G LG G +  S +IP++V++L G+   +V+ G  H+ A+
Sbjct: 136 HYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL 195

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVA 475
            +               G  F WG    G+L   G+  KE    P  +  L + ++  ++
Sbjct: 196 SLT--------------GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-V 533
           CG++ +  LT  G V+T G  + GQL   P +    P  ++G      V ++ C +YH +
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTI 299

Query: 534 AALTSTSKVYTWGKG 548
           A + +T +V + G+G
Sbjct: 300 AYVYTTGQVVSLGRG 314



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 22/280 (7%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           SG+ +   A GE+H+  +  +  +Y+ GD ++  G LG     S   P  +   L+ +H+
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSW--GQLGQRRDQSTERPEPIQA-LNDLHV 76

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGV 412
             +SCG  H+  V   G +F +G GS G LG G+    S +P +++ L G++  +VSCG 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENI 471
           +H+ A+              +  G +F+WG   +G+LG G +   +  P+ V  L    +
Sbjct: 137 YHSLAL--------------SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAESFVEEVAC 528
            QVA G   S AL+ +G  +  GS   GQL   G  V + +      G +    V  ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
           G  H A LT   +V+T+G  ++GQL    +  +  P L++
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIE 282



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 21/254 (8%)

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           PR++     GI L   + G  H+ ++ S   +++ GD S+G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLF 459
             L    VSCG  H+ AV                 GK+F WG G +G+LG G+ KE    
Sbjct: 72  NDLHVDLVSCGKEHSVAV--------------CHKGKVFAWGAGSEGQLGIGEFKEISFM 117

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGE 517
           P  +  L    I QV+CGH  S+AL+  GHV++ G  + GQLG+        +P +V   
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS- 176

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQ 574
           +    + +VA G  H  AL+ T   + WG   +GQL   G+  K+    P  +  LK+  
Sbjct: 177 LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS 236

Query: 575 VKRVVCGLNFTAII 588
           V  + CG   TA++
Sbjct: 237 VIYISCGYEHTAVL 250


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 197/421 (46%), Gaps = 48/421 (11%)

Query: 176 TFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG--EHRVGYSFSRQTDAL 233
           +F   +S+ VS+     A  D  +   +  WG G A+G LGGG  E R+ Y     T  L
Sbjct: 10  SFMRRMSTSVSAPLLWKAENDAVTTVQLLSWGRG-ASGQLGGGIEEMRL-YPSPVATLHL 67

Query: 234 LP-------------KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
            P              +VE+   L    I+CG  H+ LV   G+++ WG+  GGRLG G+
Sbjct: 68  PPSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVV-DGKLWIWGKGDGGRLGFGQ 126

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
           E     P L   L   ++   A G  H+ A++  G ++TWG G +  G LGH       +
Sbjct: 127 EYPAFLPTLNPNLD--SIRSTALGGVHSVALSSLGQVFTWGYGGF--GALGHSVYHRELL 182

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG-DGSFGALGHGDHIST------SI 393
           PR V G+ +   + +I+    HTA +T +G L+T+G D   G LG G +         SI
Sbjct: 183 PRMVEGSWNA-KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSI 241

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P +V+ L  +    VSCG + T  +              T  G+L+ WG      LG GD
Sbjct: 242 PSKVKALP-VPVAAVSCGGFFTMVL--------------TQEGQLWNWGANSNYELGRGD 286

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPT 512
           K     P+ +  L D  I Q+A G   S+ALT  G V + G   +GQLG   + +  +PT
Sbjct: 287 KVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPT 346

Query: 513 RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG-HGDKDNRNSPTLVDFLK 571
            ++  +A+  V  +ACG    AA+T   K+Y WG   + QLG  G  + +  P  V FL 
Sbjct: 347 VIE-ALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLM 405

Query: 572 D 572
           +
Sbjct: 406 E 406



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 175/383 (45%), Gaps = 51/383 (13%)

Query: 178 RISLSSVVSSS-------SHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQT 230
           R+ L SV ++S       S G  H      G ++IWG+G           R+G  F ++ 
Sbjct: 79  RLCLPSVENASGLTEVGISCGLFHSSLVVDGKLWIWGKGDGG--------RLG--FGQEY 128

Query: 231 DALLPKAVESTMALD-VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            A LP    +   LD + + A G  H+V ++  G++F+WG    G LGH        P++
Sbjct: 129 PAFLPTLNPN---LDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRM 185

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS------CWIPRK 343
           +E      +  +A    HT A+T SG+LYTWG      G LG G            IP K
Sbjct: 186 VEGSWNAKIRHIATAGTHTAAITESGELYTWGR-DQGDGRLGLGPNCGPNEGGGLSIPSK 244

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           V      + ++ +SCG + T V+T  G L+ +G  S   LG GD +    P+ + +L+ +
Sbjct: 245 VKA--LPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDV 302

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
           R  +++ G +H+ A+              T  GK+ +WG G  G+LGH   E +  P  +
Sbjct: 303 RIIQIASGGYHSLAL--------------TDDGKVLSWGYGQHGQLGHSSIENQKIPTVI 348

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRV-------DG 516
             L DE++  +ACG   S A+T +G +Y  G+A   QLGVP      P  V       D 
Sbjct: 349 EALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDD 408

Query: 517 EIAESFVEEVACGAYHVAALTST 539
            +    V  VA GA H   L S+
Sbjct: 409 RLGPHNVLSVAVGASHAMCLVSS 431



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 170/371 (45%), Gaps = 59/371 (15%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEIL-----------------------SGVNVEL 300
           ++ SWG  + G+LG G E    +P  +  L                       SG+    
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG +H+  V   G L+ WG G  + G LG G +   ++P  ++ NLD I  +  + G 
Sbjct: 96  ISCGLFHSSLVV-DGKLWIWGKG--DGGRLGFGQEYPAFLP-TLNPNLDSIRST--ALGG 149

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  ++S G +FT+G G FGALGH  +    +PR VE     +   ++    HTAA+  
Sbjct: 150 VHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAI-- 207

Query: 421 ATDSSSSSPSGSTSCGKLFTWG-DGDKGRLGHGDKEPRLFPECVAPL--------IDENI 471
                       T  G+L+TWG D   GRLG G   P   P     L        +   +
Sbjct: 208 ------------TESGELYTWGRDQGDGRLGLG---PNCGPNEGGGLSIPSKVKALPVPV 252

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAY 531
             V+CG   ++ LT  G ++  G+ +  +LG     G    +    + +  + ++A G Y
Sbjct: 253 AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGY 312

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC-- 589
           H  ALT   KV +WG G +GQLGH   +N+  PT+++ L D+ V  + CG + +A I   
Sbjct: 313 HSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDN 372

Query: 590 --LHKWVSSVD 598
             L+ W ++ D
Sbjct: 373 GKLYMWGNAKD 383


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 150/294 (51%), Gaps = 22/294 (7%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG----EYHTCAVTRSGDLYTWG 321
           FSWG  + G LG G    V  P  I  L G+ V  VACG    E H+ AVT  G +YTWG
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G   SG LGHG   +  +PR + G L    +  ++CG  HT VV+ AG +F +G G FG
Sbjct: 61  SG--KSGQLGHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LG G   +++ P +V +L G++  +V+CG  HTA V              T  G ++TW
Sbjct: 118 QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVV--------------TESGHVYTW 163

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAAYGQ 500
           G G  G+LGHGD   +  P  V  L    +  +ACG   +V ++     V++ G   YGQ
Sbjct: 164 GWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQ 223

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           LG    D     +         ++++ACG+ +  AL+S   VY +G G +GQLG
Sbjct: 224 LGHGGWDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 24/242 (9%)

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           F++G  + GALG G   +   P  +  L+GL    V+CG            S     +  
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACG----------GGSEEQHSAAV 50

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T  G+++TWG G  G+LGHGD +  + P  +  L    I +VACG   +V ++ +G V+ 
Sbjct: 51  TEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFA 110

Query: 493 MGSAAYGQLGVPVA----DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            G   +GQLGV       D +  T +DG      V +VACG+ H A +T +  VYTWG G
Sbjct: 111 WGWGHFGQLGVGSTHNSNDPVQVTSLDGVK----VCKVACGSAHTAVVTESGHVYTWGWG 166

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNP 608
            NGQLGHGD  +++ P  V  L    V  + CGL  T +      VS VD +V S   + 
Sbjct: 167 VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVV------VSEVDRAVFSWGWDE 220

Query: 609 FG 610
           +G
Sbjct: 221 YG 222



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 139/274 (50%), Gaps = 36/274 (13%)

Query: 184 VVSSSSHGSAHEDFDSL----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           VVS +  G + E   +     G V+ WG G  +G LG G+ +         + +LP+ + 
Sbjct: 33  VVSVACGGGSEEQHSAAVTEQGQVYTWGSG-KSGQLGHGDSQ---------NLVLPRLIV 82

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
              +  +  +ACG+ H V+V+K G +F+WG    G+LG G   + + P  +  L GV V 
Sbjct: 83  GLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVC 142

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            VACG  HT  VT SG +YTWG G   +G LGHG   S   P  V   L GI++S ++CG
Sbjct: 143 KVACGSAHTAVVTESGHVYTWGWGV--NGQLGHGDDASQSRPMYVK-KLHGIYVSTLACG 199

Query: 360 LWHTAVVTSAGH-LFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           L HT VV+     +F++G   +G LGHG  D    +  R    ++ L+  +++CG  +T 
Sbjct: 200 LAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQ--QIACGSSYTL 257

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
           A+              +S G ++ +G G  G+LG
Sbjct: 258 AL--------------SSRGDVYAFGWGKDGQLG 277



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 132/279 (47%), Gaps = 34/279 (12%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG----LWHTAVVTSAGHLF 373
           ++WG    N G LG G+  +   P  +   L G+ +  ++CG      H+A VT  G ++
Sbjct: 1   FSWG--FNNDGALGLGTTDAVGSPCPII-ALQGLLVVSVACGGGSEEQHSAAVTEQGQVY 57

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T+G G  G LGHGD  +  +PR +  L+      V+CG  HT  V              +
Sbjct: 58  TWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVV--------------S 103

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G +F WG G  G+LG G       P  V  L    +C+VACG   +  +T SGHVYT 
Sbjct: 104 KAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTW 163

Query: 494 GSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGKGANG 551
           G    GQLG    A    P  V  ++   +V  +ACG  H   ++   + V++WG    G
Sbjct: 164 GWGVNGQLGHGDDASQSRPMYVK-KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYG 222

Query: 552 QLGHGDKD----NRN-SPTLVDFLKDKQVKRVVCGLNFT 585
           QLGHG  D    N+N SP  +     K ++++ CG ++T
Sbjct: 223 QLGHGGWDIFGGNKNRSPRPI-----KDLQQIACGSSYT 256


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 39/337 (11%)

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           V++T+ G ++ +G    G+LG G    V+ P  ++ L    V  +ACG  HT A+T+   
Sbjct: 43  VVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRH 102

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           L+++G G    G LG G       PR +   L+      +SCG  H+A +T++G L+ +G
Sbjct: 103 LHSFGAG--GEGQLGVGDSKQYEAPRMIE-ELEEQDYLLLSCGTDHSAALTASGTLYMWG 159

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
            GS G LGHG+     IPRE+    G+    VSCG +HTA +              T   
Sbjct: 160 GGSEGQLGHGEDTEVQIPRELSM--GVPVRMVSCGYYHTALL--------------TEDK 203

Query: 437 KLFTW-------GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           KL+T+           +  LG G  EP+           E +  V+CG+  + A+T  GH
Sbjct: 204 KLYTFGEGEGGKLGLGEAHLG-GVNEPQH-----VSFFTEPVDSVSCGNAHTAAITEKGH 257

Query: 490 VYTMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           VYT G+ A GQLG    D L   +P RV   +  +  + V+CG  H A +T+   +YT+G
Sbjct: 258 VYTFGNGASGQLGH-GPDHLETNIPKRV-ARLEWTRCKWVSCGDCHTAIVTAKGCLYTFG 315

Query: 547 KGANGQLGHGDKDNRN--SPTLVDFLKDKQVKRVVCG 581
            G +G+LG G++   N  +P+ V       V+ V CG
Sbjct: 316 DGRHGKLGQGEESFSNVFTPSKVHRFNGFLVEEVSCG 352



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 127/271 (46%), Gaps = 67/271 (24%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P +V+      V  IACG  H + +TK   + S+G    G+LG G       P++IE L 
Sbjct: 73  PSSVKGLKHAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELE 132

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS--------- 345
             +  L++CG  H+ A+T SG LY WG G+   G LGHG      IPR++S         
Sbjct: 133 EQDYLLLSCGTDHSAALTASGTLYMWGGGS--EGQLGHGEDTEVQIPRELSMGVPVRMVS 190

Query: 346 ------------------------------GNLDGI----HLSY-------ISCGLWHTA 364
                                          +L G+    H+S+       +SCG  HTA
Sbjct: 191 CGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSCGNAHTA 250

Query: 365 VVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            +T  GH++TFG+G+ G LGHG DH+ T+IP+ V  L   R   VSCG  HTA V     
Sbjct: 251 AITEKGHVYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIV----- 305

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
                    T+ G L+T+GDG  G+LG G++
Sbjct: 306 ---------TAKGCLYTFGDGRHGKLGQGEE 327



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 59/256 (23%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
           F  GGE ++G   S+Q +A  P+ +E     D   ++CG  H+  +T  G ++ WG  S 
Sbjct: 106 FGAGGEGQLGVGDSKQYEA--PRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSE 163

Query: 274 GRLGHGREADVSHPQLIEI----------------------------------------L 293
           G+LGHG + +V  P+ + +                                        L
Sbjct: 164 GQLGHGEDTEVQIPRELSMGVPVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHL 223

Query: 294 SGVN-----------VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK-VSCWIP 341
            GVN           V+ V+CG  HT A+T  G +YT+G+G   SG LGHG   +   IP
Sbjct: 224 GGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGA--SGQLGHGPDHLETNIP 281

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PREVET 399
           ++V+  L+     ++SCG  HTA+VT+ G L+TFGDG  G LG G+   +++  P +V  
Sbjct: 282 KRVA-RLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVHR 340

Query: 400 LRGLRTTRVSCGVWHT 415
             G     VSCG  HT
Sbjct: 341 FNGFLVEEVSCGGCHT 356



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T  G+L+ +G  D G+LG G ++    P  V  L    + ++ACG   ++ALT   H+++
Sbjct: 46  TENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHLHS 105

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G+   GQLGV  +      R+  E+ E     ++CG  H AALT++  +Y WG G+ GQ
Sbjct: 106 FGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQ 165

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           LGHG+      P  +       V+ V CG   TA++   K
Sbjct: 166 LGHGEDTEVQIPRELSM--GVPVRMVSCGYYHTALLTEDK 203



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)

Query: 181 LSSVVSSSSHGSAH-EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
            +  V S S G+AH       G V+ +G G A+G LG G   +        +  +PK V 
Sbjct: 235 FTEPVDSVSCGNAHTAAITEKGHVYTFGNG-ASGQLGHGPDHL--------ETNIPKRVA 285

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA--DVSHPQLIEILSGVN 297
                    ++CG  H  +VT +G ++++G+   G+LG G E+  +V  P  +   +G  
Sbjct: 286 RLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVHRFNGFL 345

Query: 298 VELVACGEYHTCAVTR 313
           VE V+CG  HT    R
Sbjct: 346 VEEVSCGGCHTLVRAR 361


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 26/319 (8%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           +I+CG  H+ ++T+ G ++++G    G+LG G     + P  ++ L    V LVACG  H
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T   T++G LY++G G+   G LG G       P+ +  NL       +S G  H+A +T
Sbjct: 100 TIVCTKAGRLYSFGAGS--DGQLGTGDAQCATSPQLI--NLPEQKYKLLSAGTDHSAALT 155

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           + G L+ +G GS G LG G+  S   P+E++    +  + VSCG +HTA V         
Sbjct: 156 TDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSV--SWVSCGYYHTAIV--------- 204

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALT 485
                T  GKL+T+G+ + G+LG  +   E    P+ V   I E I  VACG   +  ++
Sbjct: 205 -----TDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVES-ITEKIKLVACGGAHTAVIS 258

Query: 486 TSGHVYTMGSAAYGQLG-VPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
             G++YT G   +GQLG  P    L +P +V   ++E   + V+CG  H A +T    +Y
Sbjct: 259 DVGNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCKYVSCGDNHTAVITEKGAMY 317

Query: 544 TWGKGANGQLGHGDKDNRN 562
           T+G G +G+LG  ++D  N
Sbjct: 318 TFGDGRHGKLGISEEDFCN 336



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 28/278 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+S     V+ +ACG  H ++ TK G ++S+G  S G+LG G     + PQLI  L 
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LP 137

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH-- 352
               +L++ G  H+ A+T  G LY WG G+   G LG G+  S   P+++       H  
Sbjct: 138 EQKYKLLSAGTDHSAALTTDGTLYMWGSGS--EGQLGLGNTDSVETPKELK-----FHSS 190

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIS-TSIPREVETLRGLRTTRVSC 410
           +S++SCG +HTA+VT  G L+TFG+  FG LG   D +  T+ P+ VE++   +   V+C
Sbjct: 191 VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESIT-EKIKLVAC 249

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDE 469
           G  HTA +              +  G L+T+GDG  G+LG+G    +L  P+ VA L + 
Sbjct: 250 GGAHTAVI--------------SDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEH 295

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD 507
               V+CG + +  +T  G +YT G   +G+LG+   D
Sbjct: 296 KCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEED 333



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 149/295 (50%), Gaps = 32/295 (10%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH---GSKVSCWIPRKVSGNLDGIHLSYIS 357
           ++CG+ H+  +T SG LYT+G   +    LGH    +K  C    K  G      ++ ++
Sbjct: 41  ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEG------VNLVA 94

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG  HT V T AG L++FG GS G LG GD    + P+ +  L   +   +S G  H+AA
Sbjct: 95  CGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAA 153

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +              T+ G L+ WG G +G+LG G+ +    P+ +      ++  V+CG
Sbjct: 154 L--------------TTDGTLYMWGSGSEGQLGLGNTDSVETPKELK--FHSSVSWVSCG 197

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           +  +  +T  G +YT G   +G+LG+    + D   P  V+  I E  ++ VACG  H A
Sbjct: 198 YYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVE-SITEK-IKLVACGGAHTA 255

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
            ++    +YT+G G +GQLG+G    + S P  V  L + + K V CG N TA+I
Sbjct: 256 VISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVI 310



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 29/226 (12%)

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A +   G +FTFG   F         + ++P +   +R  +   +SCG  H+A +     
Sbjct: 7   ADIPETGAIFTFGKSRF---------ADNLPSKF-WIRNDKAMHISCGDEHSAII----- 51

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T  G+L+T+G  D G+LG G  +P   P CV  L  E +  VACG   ++ 
Sbjct: 52  ---------TESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIV 102

Query: 484 LTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            T +G +Y+ G+ + GQLG   A     P  ++  + E   + ++ G  H AALT+   +
Sbjct: 103 CTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN--LPEQKYKLLSAGTDHSAALTTDGTL 160

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           Y WG G+ GQLG G+ D+  +P  + F     V  V CG   TAI+
Sbjct: 161 YMWGSGSEGQLGLGNTDSVETPKELKF--HSSVSWVSCGYYHTAIV 204



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 25/183 (13%)

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           +ATD  +  P      G +FT+G   K R    D  P  F      + ++    ++CG +
Sbjct: 1   MATDDDADIPE----TGAIFTFG---KSRFA--DNLPSKFW-----IRNDKAMHISCGDE 46

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG---EIAESFVEEVACGAYHVAAL 536
            S  +T SG +YT GS  +GQLG+     + PT   G    + +  V  VACG  H    
Sbjct: 47  HSAIITESGRLYTFGSNDWGQLGL---GHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVC 103

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHK 592
           T   ++Y++G G++GQLG GD     SP L++ L +++ K +  G + +A +     L+ 
Sbjct: 104 TKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYM 162

Query: 593 WVS 595
           W S
Sbjct: 163 WGS 165



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           ++G +  +  D   PK VES +   +  +ACG  H  +++  G ++++G+   G+LG+G 
Sbjct: 220 KLGLTEDQLEDTTTPKHVES-ITEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGP 278

Query: 281 EA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW 339
               +S PQ +  LS    + V+CG+ HT  +T  G +YT+GDG +  G LG   +  C 
Sbjct: 279 SLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRH--GKLGISEEDFCN 336

Query: 340 I--PRKVS 345
           I  P KVS
Sbjct: 337 IFKPCKVS 344


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 169/377 (44%), Gaps = 28/377 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V NI+    HA  VT+ GE+F+ G+ S    GHG     +  P  I+ L G++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              T  +T  G +YT G  T+  G LGHG  +    P+ V        +  ++ G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTF 274

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVAT 422
            VT  G +++FG  +   LGHGD      PR +++   R +   RVS G  H  A+    
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 330

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G ++TWG G  G LGHGD+  +  PE ++ L  +   QV      + 
Sbjct: 331 ----------DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTF 380

Query: 483 ALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            LT  G V+  G   +G LG P    +D ++  RV   + + +V +++ G YH  A+T+ 
Sbjct: 381 VLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNR 440

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
             V+ +G     QLG         PT + F   K ++ +V      A     ++  +V  
Sbjct: 441 GIVFGFGDNERAQLGQEYIRGCLKPTEIMF--QKSMEEIV----IAAPSGRQRFPGTVIK 494

Query: 600 SVCSSCHNPFGFRRKRH 616
             C   H P G  ++ H
Sbjct: 495 KRCCGWHQPLGNHKQYH 511



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 164/357 (45%), Gaps = 34/357 (9%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           SLS VV+ S+  +       LG+VF  G+   N  L  G   VG +  R      P  ++
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGD---NSSLCCGHGEVGRTIFR------PTEIK 203

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN-V 298
           +   +    +A G    V++T  G++++ G  + G+LGHG   D + P+++E+  G+  V
Sbjct: 204 ALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPV 263

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYIS 357
             VA G  +T AVT  G +Y++G  T  +  LGHG +     PR + S     IH+  +S
Sbjct: 264 VQVAAGASYTFAVTDDGTVYSFGSCT--NFCLGHGDQHDELRPRAIQSFKRRNIHVVRVS 321

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  H   + + G+++T+G G  GALGHGD    + P  + +L+     +V         
Sbjct: 322 AGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCA---RKRK 378

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK---EPRLFPECVAPLIDENICQV 474
             V TD            G +F +G    G LG  D+   +  + P  +  L D  + Q+
Sbjct: 379 TFVLTDE-----------GSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQI 427

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGA 530
           + G   +VA+T  G V+  G     QLG     G L PT +   + +  +EE+   A
Sbjct: 428 STGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEIVIAA 481



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ++F+     VV  S+        D+LG V+ WG G   G LG G+         +
Sbjct: 303 RPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYC-GALGHGD---------E 352

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D   P+ + S  +     +    R   ++T +G +F++G    G LG    G    V  
Sbjct: 353 NDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMR 412

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           P++++ L    V  ++ G YHT AVT  G ++ +GD
Sbjct: 413 PRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGD 448


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 174/345 (50%), Gaps = 32/345 (9%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RHA+L+     + + G+ SGG+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 35  ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSL 94

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           AV   G ++ WG G+   G LG G  +  C+IP+K+   L GI +  ISCG +H+  ++ 
Sbjct: 95  AVCHKGKVFAWGVGS--DGQLGTGKFEEICFIPQKIKA-LTGIKIIQISCGYYHSLALSK 151

Query: 369 AGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ ++      
Sbjct: 152 DGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS------ 205

Query: 428 SPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   G  F WG+   G+L   G+        P  V  L +  +  ++CG++ +  L
Sbjct: 206 --------GTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVL 257

Query: 485 TTSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKV 542
           T +  V+T G  ++GQLG   V+    P  V+G      V ++ CG+YH +A + +T +V
Sbjct: 258 TQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQV 315

Query: 543 YTWGK----GANGQLGHGDKDNRNSPTLV--DFLKDKQVKRVVCG 581
            ++G+     +N        +N +   L+  D L+D Q+K +  G
Sbjct: 316 VSFGREPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAG 360



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 124/224 (55%), Gaps = 13/224 (5%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG G ++G LG G+         +    +P+ +++   + +  I+CG  H++ ++
Sbjct: 100 GKVFAWGVG-SDGQLGTGKF--------EEICFIPQKIKALTGIKIIQISCGYYHSLALS 150

Query: 261 KQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           K G++FSWG+ S G+LG G+E    + PQ +  L G+ +  VA G  H+ A++ SG  + 
Sbjct: 151 KDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG 210

Query: 320 WGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           WG+ +       G+   V  + PR V G L  + + YISCG  HTAV+T    +FTFGD 
Sbjct: 211 WGNNSAGQLAFSGNNVLVQSYKPRSV-GALKNLGVVYISCGYEHTAVLTQNDQVFTFGDN 269

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           SFG LGH     T+ P+ VE + G   +++ CG +HT A V  T
Sbjct: 270 SFGQLGHNGVSQTTGPQLVEGIGG-PVSQIDCGSYHTLAYVYTT 312



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 24/266 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ +++ + L V  ++CG  H++ V  +G++F+WG  S G+LG G+  ++   PQ I+ L
Sbjct: 72  PEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL 131

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  ++CG YH+ A+++ G +++WG  ++  G LG G +       +   +L+GI L
Sbjct: 132 TGIKIIQISCGYYHSLALSKDGQVFSWGKNSH--GQLGLGQEFPSQASPQRVRSLEGIPL 189

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G+ S G L   G+   + +  PR V  L+ L    +SC
Sbjct: 190 AQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISC 249

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T   ++FT+GD   G+LGH        P+ V   I   
Sbjct: 250 GYEHTAVL--------------TQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEG-IGGP 294

Query: 471 ICQVACG--HDLSVALTTSGHVYTMG 494
           + Q+ CG  H L+   TT G V + G
Sbjct: 295 VSQIDCGSYHTLAYVYTT-GQVVSFG 319



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 106/241 (43%), Gaps = 26/241 (10%)

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           GD S G LG     S   P  ++ L  L    VSCG  H+ AV                 
Sbjct: 54  GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHK-------------- 99

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           GK+F WG G  G+LG G  E   F P+ +  L    I Q++CG+  S+AL+  G V++ G
Sbjct: 100 GKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWG 159

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGAN 550
             ++GQLG+       P++   +   S     + +VA G  H  AL+ +   + WG  + 
Sbjct: 160 KNSHGQLGLGQE---FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSA 216

Query: 551 GQLGHGDKD---NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV-DHSVCSSCH 606
           GQL     +       P  V  LK+  V  + CG   TA++  +  V +  D+S     H
Sbjct: 217 GQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGH 276

Query: 607 N 607
           N
Sbjct: 277 N 277



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 21/199 (10%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A      G + +  S+        P++V
Sbjct: 187 IPLAQVAAGGAHSFA---LSLSGTSFGWGNNSAGQLAFSGNNVLVQSYK-------PRSV 236

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+  ++F++G+ S G+LGH   +  + PQL+E + G  V
Sbjct: 237 GALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIGG-PV 295

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGH------GSKVSCWIPRKVSGNLDGI 351
             + CG YHT A V  +G + ++G    ++    H       S +SC I    + +L  I
Sbjct: 296 SQIDCGSYHTLAYVYTTGQVVSFGREPSHTSNPTHPETPSENSDISCLIS---ADDLRDI 352

Query: 352 HLSYISCGLWHTAVVTSAG 370
            + +I  G +   V T  G
Sbjct: 353 QIKHIFAGTYADFVTTHQG 371


>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 774

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 145/316 (45%), Gaps = 43/316 (13%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS---CWIPRKVSGNLDG 350
           S   V  V+ G     AVT++G L+ W      +  L  G+  S    ++PR + G   G
Sbjct: 332 SDTQVTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQ-SG 390

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           +++  ++CG   TA +T  G L TFG G +G LGHG++   +  + VE L G    +VSC
Sbjct: 391 VNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSC 450

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE------PRLFPECVA 464
           G  H  AV              T+  ++F+WG GD GRLG GD+E      P + PE + 
Sbjct: 451 GASHVLAV--------------TNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLR 496

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV--ADGLVPTRVDG------ 516
           P        V CG D S+ LT    +   GS  Y +L + V   DG     VD       
Sbjct: 497 P------SSVHCGVDCSMILTLDNKLLCCGSNRYNKLALDVIATDGTCMKLVDEIHTFVQ 550

Query: 517 ----EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
                I    V+ VA G  H AA+T   + YT+G    GQLG+   +N   P  V   + 
Sbjct: 551 TASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGN-QTNNSRQPQEVKIAQT 609

Query: 573 KQVKRVVCGLNFTAII 588
           ++V  V CG  FT I+
Sbjct: 610 QKVAMVACGDTFTVIV 625



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 166/381 (43%), Gaps = 37/381 (9%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           +L  VF WG G++                  +   LP     T    V  ++ G      
Sbjct: 310 ALSSVFFWGIGVS------------------SPVKLPLPSSDT---QVTQVSTGRTQKAA 348

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSH-----PQLIEILSGVNVELVACGEYHTCAVTR 313
           VTK G +F W   + G       A  SH     P+ +E  SGVN++ VACG+  T  +T 
Sbjct: 349 VTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQQVACGDLFTACLTD 408

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G L T+G G Y  G LGHG+        K+  +L G  +  +SCG  H   VT+   +F
Sbjct: 409 RGILMTFGSGVY--GCLGHGNYNDV-AQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVF 465

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           ++G G  G LG GD  S S PR V     LR + V CGV    ++++  D+      GS 
Sbjct: 466 SWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGV--DCSMILTLDNKLLC-CGSN 522

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLIDENICQVACGHDLSVALTTSGHVYT 492
              KL        G       E   F +  + P+ +  +  VA G   + A+T  G  YT
Sbjct: 523 RYNKLALDVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYT 582

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKGANG 551
            G+  +GQLG    +   P  V  +IA++  V  VACG      +    +VY++G  + G
Sbjct: 583 FGTNQFGQLGNQTNNSRQPQEV--KIAQTQKVAMVACGDTFTVIVADEGEVYSFGNQSRG 640

Query: 552 QLGHGDKDNRNSPTLVDFLKD 572
           +LG  ++D    P  V F+ +
Sbjct: 641 RLGRPEEDP-TEPGKVPFMGE 660



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 152/354 (42%), Gaps = 36/354 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+W          G +  +  +    T   +P+ +E    +++  +ACG      +T
Sbjct: 353 GRLFVWESSNV-----GTDTLIPGATESHTLTYVPRYLEGQSGVNIQQVACGDLFTACLT 407

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +G + ++G    G LGHG   DV+  +++E L G  V  V+CG  H  AVT   ++++W
Sbjct: 408 DRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVFSW 467

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G G  ++G LG G + S   PR V    + +  S + CG+  + ++T    L   G   +
Sbjct: 468 GRG--DNGRLGLGDQESHSSPRPVVIP-EPLRPSSVHCGVDCSMILTLDNKLLCCGSNRY 524

Query: 381 GALGHG------------DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             L               D I T +      +  L    V+ G  HTAAV V        
Sbjct: 525 NKLALDVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVE------- 577

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                  G+ +T+G    G+LG+     R  P+ V     + +  VACG   +V +   G
Sbjct: 578 -------GQCYTFGTNQFGQLGNQTNNSRQ-PQEVKIAQTQKVAMVACGDTFTVIVADEG 629

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            VY+ G+ + G+LG P  D   P +V     + FV  V+    H   L +T +V
Sbjct: 630 EVYSFGNQSRGRLGRPEEDPTEPGKVPFMGEDPFV-VVSLSCSHGNTLLATRRV 682



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR--LGHGDKEPRLF-- 459
           + T+VS G    AAV              T  G+LF W   + G   L  G  E      
Sbjct: 335 QVTQVSTGRTQKAAV--------------TKNGRLFVWESSNVGTDTLIPGATESHTLTY 380

Query: 460 -PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI 518
            P  +      NI QVACG   +  LT  G + T GS  YG LG    + +   ++  ++
Sbjct: 381 VPRYLEGQSGVNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDL 440

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
               V +V+CGA HV A+T+  +V++WG+G NG+LG GD+++ +SP  V   +  +   V
Sbjct: 441 LGYEVVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSV 500

Query: 579 VCGLNFTAIICL 590
            CG++ + I+ L
Sbjct: 501 HCGVDCSMILTL 512


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 166/315 (52%), Gaps = 26/315 (8%)

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
           T  +++   A G  H++L+     ++S G+ S G+LG  R+     P+ I+ L+ ++V+L
Sbjct: 19  TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDL 78

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCG 359
           V+CG+ H+ AV   G ++ WG G+   G LG G  K   ++P K+   L GI +  +SCG
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGS--EGQLGIGEFKEISFMPTKIKA-LAGIKIIQVSCG 135

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAV 418
            +H+  ++  GH+F++G  S G LG G +  S +IP++V++L G+   +V+ G  H+ A+
Sbjct: 136 HYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL 195

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLFPECVAPLIDENICQVA 475
            +               G  F WG    G+L   G+  KE    P  +  L + ++  ++
Sbjct: 196 SLT--------------GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-V 533
           CG++ +  LT  G V+T G  + GQL   P +    P  ++G      V ++ C +YH +
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTI 299

Query: 534 AALTSTSKVYTWGKG 548
           A + +T +V + G+G
Sbjct: 300 AYVYTTGQVVSLGRG 314



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 22/280 (7%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           SG+ +   A GE+H+  +  +  +Y+ GD ++  G LG     S   P  +   L+ +H+
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSW--GQLGQRRDQSTERPEPIQA-LNDLHV 76

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGV 412
             +SCG  H+  V   G +F +G GS G LG G+    S +P +++ L G++  +VSCG 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENI 471
           +H+ A+              +  G +F+WG   +G+LG G +   +  P+ V  L    +
Sbjct: 137 YHSLAL--------------SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAESFVEEVAC 528
            QVA G   S AL+ +G  +  GS   GQL   G  V + +      G +    V  ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
           G  H A LT   +V+T+G  ++GQL    +  +  P L++
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIE 282



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 21/254 (8%)

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           PR++     GI L   + G  H+ ++ S   +++ GD S+G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLF 459
             L    VSCG  H+ AV                 GK+F WG G +G+LG G+ KE    
Sbjct: 72  NDLHVDLVSCGKEHSVAV--------------CHKGKVFAWGAGSEGQLGIGEFKEISFM 117

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGE 517
           P  +  L    I QV+CGH  S+AL+  GHV++ G  + GQLG+        +P +V   
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS- 176

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQ 574
           +    + +VA G  H  AL+ T   + WG   +GQL   G+  K+    P  +  LK+  
Sbjct: 177 LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS 236

Query: 575 VKRVVCGLNFTAII 588
           V  + CG   TA++
Sbjct: 237 VIYISCGYEHTAVL 250


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 173/355 (48%), Gaps = 34/355 (9%)

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-D 283
           SFSR T   L + V+ + +   HN      HA  + + GE+F+ G+ S    GH   +  
Sbjct: 153 SFSRITFPSLARVVQVSAS---HN------HAAYILESGEVFTCGDNSSFCCGHQDTSRP 203

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
           +  P+ +E L GV  + VA G   T  +TR+G +Y+ G  T+  G LGHG  +    P K
Sbjct: 204 IFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTH--GQLGHGDTLDRPTP-K 260

Query: 344 VSGNLDGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR- 401
           +  + +GI  ++ I+ G  +   VT +G +++FG GS   LGHG+  +   PR ++T R 
Sbjct: 261 IIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRR 320

Query: 402 -GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
             L   RVS G  H    VVA DSS          G ++TWG G  G LGHGD+  +  P
Sbjct: 321 KNLHVVRVSAGDEH----VVALDSS----------GFVYTWGKGYCGALGHGDEIDKTLP 366

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGE 517
           E +  L      QV      +  L   G V+  G   +G LG P   V+D ++  R+   
Sbjct: 367 EPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDS 426

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           +    V +++ G YH  A+TS  +V+ +G     QLGH        PT + FL++
Sbjct: 427 LRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEI-FLQE 480



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 129/287 (44%), Gaps = 31/287 (10%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +  G YHT  ++ S  +Y+ G      G+LGHG + +  +            +  +S   
Sbjct: 116 ITTGRYHTLLISNS-SVYSCGSSL--CGVLGHGPETTQCVSFSRITFPSLARVVQVSASH 172

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAV 418
            H A +  +G +FT GD S    GH D  S  I  PR VE L+G+   +V+ G+  T  +
Sbjct: 173 NHAAYILESGEVFTCGDNSSFCCGHQD-TSRPIFRPRFVEALKGVPCKQVAAGLNFTVFL 231

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID-ENICQVACG 477
                         T  G +++ G    G+LGHGD   R  P+ +       ++ Q+A G
Sbjct: 232 --------------TRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAG 277

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF------VEEVACGAY 531
               +A+T SG VY+ GS +   LG     G           ++F      V  V+ G  
Sbjct: 278 PSYVLAVTDSGVVYSFGSGSNFCLG----HGEQHNEFHPRAIQTFRRKNLHVVRVSAGDE 333

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
           HV AL S+  VYTWGKG  G LGHGD+ ++  P  ++ LK     +V
Sbjct: 334 HVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQV 380



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 15/175 (8%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A +TFR     VV  S+        DS G V+ WG+G   G LG G+         + D 
Sbjct: 314 AIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYC-GALGHGD---------EIDK 363

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSHPQL 289
            LP+ + S  +     +    R   ++   G +F +G    G LG    G    V  P++
Sbjct: 364 TLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRI 423

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           ++ L    V  ++ G YHT AVT  G ++ +GD       LGH +   C  P ++
Sbjct: 424 LDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDN--ERAQLGHDTLRGCLEPTEI 476


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 15/349 (4%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           + ++P  + +T  +    I   + H++ +T +GE  +WG     RLGHG  +    P+ I
Sbjct: 197 NKMVPTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTI 256

Query: 291 EILS-GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NL 348
           E LS    V  +ACG  HT A+  SG+LY WG+G+  +G LG G       P + +G ++
Sbjct: 257 EFLSLKGRVRDLACGLGHTLALIESGELYAWGNGS--NGRLGLGDTNDRSSPTRSNGASI 314

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             +   +I CG  H+  ++  G  + +G  + G  GHG        +E+E+ R       
Sbjct: 315 APVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEE 374

Query: 409 SCGVWHTAAVVVAT-DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
              V + A     T   ++S    S  CG   +   G    LGHGD + RL P  V  L 
Sbjct: 375 EEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALD 434

Query: 468 D--ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRV---DGEIAES 521
           D  E + +VACG D S+A+T +G VYT GS A G+LG    +   +PT V   DG+    
Sbjct: 435 DTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKK--- 491

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            V++   G  H   LT   +++T G+G +G+LGHGD   R  PT ++  
Sbjct: 492 -VKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 165/357 (46%), Gaps = 48/357 (13%)

Query: 263 GEIFSWGEESGGRLGHGREADVSH-----------PQLIEILSGVNVELVACGEYHTCAV 311
           G + S+G+   G+LGHG+ + VS            P +I     V    +     H+ A+
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIHLSYISCGLWHTAVVTSAG 370
           T  G+   WG+G  +   LGHGS    + PR +   +L G  +  ++CGL HT  +  +G
Sbjct: 226 TAKGEAMAWGNG--DKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALIESG 282

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVE--TLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            L+ +G+GS G LG GD    S P      ++  +R   + CG  H+             
Sbjct: 283 ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSL------------ 330

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGD-------KEPRLFPECVAPLIDENICQVACGHDLS 481
             G +  G+ + WG  ++G+ GHG        +E   F +      +E +   A G + +
Sbjct: 331 --GLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHT 388

Query: 482 VALTTSGHVYTMGSAAYG--QLGVPVADG-------LVPTRVDG-EIAESFVEEVACGAY 531
           +  T SG VY+ G       + G+P   G       L PT V   +     V +VACG  
Sbjct: 389 LFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWD 448

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H  A+T+  +VYTWG GANG+LGHGD+++ + PTLV  +  K+VK    G   T  +
Sbjct: 449 HSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFL 505



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 48/348 (13%)

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
           A T  +    + S S+H  A     + G+   WG G         ++R+G+  S  +   
Sbjct: 205 AATRDVLFRKIDSLSTHSIA---ITAKGEAMAWGNG--------DKYRLGHGSS--SKEY 251

Query: 234 LPKAVES-TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE- 291
            P+ +E  ++   V ++ACG  H + + + GE+++WG  S GRLG G   D S P     
Sbjct: 252 TPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSPTRSNG 311

Query: 292 -ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD- 349
             ++ V    + CG  H+  ++  G  Y WG    N G  GHG     W  +++    D 
Sbjct: 312 ASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKN--NQGQCGHGHTNDQWTIQEIESFRDT 369

Query: 350 -----GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA--------LGHGDHISTSIPRE 396
                   + Y + G  HT   T++G +++ G G   +        LGHGD      P  
Sbjct: 370 EEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTS 429

Query: 397 VETLRGL--RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           V+ L        +V+CG  H+ AV              T+ G+++TWG G  G+LGHGD+
Sbjct: 430 VQALDDTHEEVVKVACGWDHSLAV--------------TANGRVYTWGSGANGKLGHGDE 475

Query: 455 EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           E    P  V  +  + +     G + +V LT    ++T G    G+LG
Sbjct: 476 ESFDIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLG 523



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG G ANG LG G+     SF       +P  V       V +   G  H V +T
Sbjct: 457 GRVYTWGSG-ANGKLGHGDEE---SFD------IPTLVRCMDGKKVKDAKAGCEHTVFLT 506

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
              E+++ G+   GRLGHG       P  IE+ 
Sbjct: 507 YDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG G   S   P  + G LD   + +++CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 29/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   +L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFENVLQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G   S   P  +E L   +   V+CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 110/210 (52%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G      +P LIE L    VE VACG  H+  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      +P  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E + +P  +  L ++ +  V
Sbjct: 203 SMALSMS--------------GNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFV 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+    V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 36/229 (15%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H  +++S G  F +           D+ S    R    L+  +  +++CG +H+ A+
Sbjct: 105 GAEHMLILSSDGKPFEY-----------DNYSMKHLRFENVLQEKKIIQITCGDYHSLAL 153

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----Q 473
                         +  G+LF WG    G+LG G K    FP    P I E++      Q
Sbjct: 154 --------------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQ 195

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYH 532
           ++ G   S+AL+ SG++Y+ G   +GQLG+   +    P+ ++G +    VE VACG  H
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSH 254

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 255 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 20/275 (7%)

Query: 151 SVSFSPSPLTNAFPDNSNDRS-SAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEG 209
           SV F P P  +   +  N       ET R+SL S     S    H      G VF WG G
Sbjct: 20  SVDFMP-PSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHR-----GRVFAWGAG 73

Query: 210 IANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWG 269
            + G LG GE + G +F+       PK +++   + +  ++CG  H++ +++ G++FSWG
Sbjct: 74  -SEGQLGTGEVK-GINFT-------PKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWG 124

Query: 270 EESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS- 327
           + S G+LG G+E      PQ +  L G+ +  VA G  H+ A++ SG  + WG+ +    
Sbjct: 125 KNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQL 184

Query: 328 GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD 387
            L G+   V  + PR + G L  + + YISCG  HTAV+T  G +FTFGD S G LGH  
Sbjct: 185 ALSGNNVPVQSYKPRSI-GALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSP 243

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
                 P+ VE + GL  +++ CG +HT A V  T
Sbjct: 244 SAQDRGPQLVERIDGL-VSQIDCGSYHTLAYVYTT 277



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 32/276 (11%)

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIP 341
           +  +P+ I  L  + V LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + P
Sbjct: 33  ETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGS--EGQLGTGEVKGINFTP 90

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETL 400
           +K+   L GI +  +SCG +H+  ++  G +F++G  S G LG G    S   P+ V +L
Sbjct: 91  KKIK-TLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL 149

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--R 457
            G+   +V+ G  H+ A+ V+              G  F WG+   G+L   G+  P   
Sbjct: 150 EGIPLAQVAAGGAHSFALSVS--------------GTSFGWGNNSAGQLALSGNNVPVQS 195

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPT---R 513
             P  +  L +  +  ++CG++ +  LT +G V+T G  + GQLG  P A    P    R
Sbjct: 196 YKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVER 255

Query: 514 VDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKG 548
           +DG      V ++ CG+YH +A + +T +V ++G+G
Sbjct: 256 IDG-----LVSQIDCGSYHTLAYVYTTGQVVSFGRG 286



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 24/241 (9%)

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTT 406
           L+ + +S +SCG  H+  V   G +F +G GS G LG G+    +  P++++TL G++  
Sbjct: 43  LETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKII 102

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAP 465
           +VSCG +H+ A+              +  G++F+WG   +G+LG G + P +  P+ V  
Sbjct: 103 QVSCGDYHSLAL--------------SEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRS 148

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRVDGEIAE 520
           L    + QVA G   S AL+ SG  +  G+ + GQL      VPV       R  G +  
Sbjct: 149 LEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQS--YKPRSIGALRN 206

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H A LT   KV+T+G  + GQLGH        P LV+ + D  V ++ C
Sbjct: 207 LGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERI-DGLVSQIDC 265

Query: 581 G 581
           G
Sbjct: 266 G 266



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 12/146 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A      G +    S+        P+++
Sbjct: 152 IPLAQVAAGGAHSFA---LSVSGTSFGWGNNSAGQLALSGNNVPVQSYK-------PRSI 201

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+ G++F++G+ S G+LGH   A    PQL+E + G+ V
Sbjct: 202 GALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGL-V 260

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDG 323
             + CG YHT A V  +G + ++G G
Sbjct: 261 SQIDCGSYHTLAYVYTTGQVVSFGRG 286



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL--VPTRVDGE 517
           PE +  L    +  V+CG + S+A+   G V+  G+ + GQLG     G+   P ++   
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK-DNRNSPTLVDFLKDKQVK 576
                + +V+CG YH  AL+   +V++WGK + GQLG G +  +++SP  V  L+   + 
Sbjct: 97  TGIKII-QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLA 155

Query: 577 RVVCG 581
           +V  G
Sbjct: 156 QVAAG 160


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSDPKVIENIRDQTISYISCGESHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACG 357



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAVSKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG + TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALI 310



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVTNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSDPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG   +  +T  G +YT G   +G+LG+ +    +  +PT      +  
Sbjct: 291 NIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FSRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAEDNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVTNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L    S   V+LVACG  H
Sbjct: 305 SHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCH 360


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 179/390 (45%), Gaps = 39/390 (10%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           G  H    S   V+  G G+  G LG G E     +F+R     L + V  + + +    
Sbjct: 119 GKYHTLLISNSSVYSCGSGLC-GVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN---- 173

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYH 307
                HA  V + GE+F+ G+ S    GH R+    +  P+L+E L G+  + VA G   
Sbjct: 174 -----HAAFVMQSGEVFTCGDNSSSCCGH-RDTTRPIFRPRLVESLKGIPCKQVAAGLNF 227

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  +TR G +YT G  T+  G LGHG       P+ +      +    I+ G  +   VT
Sbjct: 228 TVFLTRKGHVYTCGTNTH--GQLGHGDTQDRPTPKMIEVLSSVVQ---IAAGPSYILSVT 282

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSS 425
             G +++FG G+   LGHG+      PR ++  R  G+   RVS G  H     VA DS+
Sbjct: 283 ENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHA----VALDSN 338

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G ++TWG G  G LGHGD+  +  PE +  L ++ + QV      +  L 
Sbjct: 339 ----------GYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLV 388

Query: 486 TSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            SG VY  GS  +G LG     V+D ++  R+   +    V +++ G YH   +TS  ++
Sbjct: 389 DSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQI 448

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           + +G     QLGH    +   PT + F+KD
Sbjct: 449 FGFGDNERAQLGHDTLRSCLEPTEI-FIKD 477



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 24/294 (8%)

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           Q++E  SG N+++   G+YHT  ++ S  +Y+ G G    G+LG GS+ +  +       
Sbjct: 105 QMVETSSG-NMQITT-GKYHTLLISNS-SVYSCGSGL--CGVLGQGSETTQCVAFTRIDF 159

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTT 406
                + ++S    H A V  +G +FT GD S    GH D       PR VE+L+G+   
Sbjct: 160 PPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCK 219

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +V+ G+  T  +              T  G ++T G    G+LGHGD + R  P+ +  L
Sbjct: 220 QVAAGLNFTVFL--------------TRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VE 524
              ++ Q+A G    +++T +G VY+ GS A   LG     D L P  +     +   + 
Sbjct: 266 --SSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIV 323

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            V+ G  H  AL S   VYTWGKG  G LGHGD+  + +P L+  LK++ V +V
Sbjct: 324 RVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)

Query: 173 AAETFR---ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           A + FR   I +  V +   H  A    DS G V+ WG+G   G LG G+         +
Sbjct: 311 AIQKFRRKGIHIVRVSAGDEHAVA---LDSNGYVYTWGKGYC-GALGHGD---------E 357

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH--GREAD-VSH 286
            +   P+ + S     V  +    R   ++   G ++ +G    G LG    R +D V  
Sbjct: 358 IEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLK 417

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P++++ L   +V  ++ G YHT  +T  G ++ +GD       LGH +  SC  P ++
Sbjct: 418 PRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDN--ERAQLGHDTLRSCLEPTEI 473


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 175/373 (46%), Gaps = 38/373 (10%)

Query: 188 SSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH 247
           S HG++   F S  +V++WG   ++    G   ++          L+PK   S  +    
Sbjct: 354 SFHGNS---FASNEEVYVWGSNSSHQLAEGSMDKI----------LVPKLATSFGS--AQ 398

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI----EILSGVNVELVAC 303
            I  G     ++   G + + G+ S GRLG G   + +  + +    E L          
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKG- 457

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            + HT A+T  G +Y+WGDG Y  G LGHG+  +  IP+ V G L    +  I+ G  H+
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDY--GKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHS 515

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A VT  G L+T+G+G +G LGHGD+ S ++P +V+ +      +V+CG  HT  V     
Sbjct: 516 AAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVA--NVGQVACGSAHTVCV----- 568

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
               S  G T    ++++G GD G+LGH D      P+ +  L    I +V CG   S+A
Sbjct: 569 ----SQDGQT----VWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLA 620

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           LT++G VY  G       G   A    P  +    + S V +++ G  H  ALT  + VY
Sbjct: 621 LTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHSVV-DISVGDSHCVALTQDNNVY 679

Query: 544 TWGKGANGQLGHG 556
            WG  + GQ G G
Sbjct: 680 AWGNNSMGQCGQG 692



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 31/325 (9%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E++ WG  S  +L  G    +  P+L    S  + + +  G+Y T  +   G ++  G G
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLAT--SFGSAQQIEAGQYCTFVIFPDGFVHACGKG 422

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW----HTAVVTSAGHLFTFGDGS 379
           +Y  G LG G   +    +++  N D   L            HT  +T  G ++++GDG 
Sbjct: 423 SY--GRLGLGDSTNQTQLKRL--NFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGD 478

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTR-VSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           +G LGHG+  +  IP+ VE   G +    ++ G  H+AAV              T  G+L
Sbjct: 479 YGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAV--------------TEDGEL 524

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAA 497
           +TWG+GD GRLGHGD   R  P  V  +   N+ QVACG   +V ++  G  V++ GS  
Sbjct: 525 YTWGEGDYGRLGHGDNNSRNVPVQVKDV--ANVGQVACGSAHTVCVSQDGQTVWSFGSGD 582

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            G+LG    + +   +V   +    + +V CG+    ALTST +VY WG G +  LG G 
Sbjct: 583 NGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS--LGTGS 640

Query: 558 KDNRN-SPTLVDFLKDKQVKRVVCG 581
            D  + +P L+  L+   V  +  G
Sbjct: 641 VDATSATPKLLLALQSHSVVDISVG 665



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 16/162 (9%)

Query: 436 GKLFTWGDGDKGRLGHGD-------KEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
           G +   G G  GRLG GD       K      EC+   +  +       H L  ALT  G
Sbjct: 414 GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDG--HTL--ALTLDG 469

Query: 489 HVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            VY+ G   YG+LG   +    +P  V+G +    V  +A G  H AA+T   ++YTWG+
Sbjct: 470 KVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGE 529

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKD-KQVKRVVCGLNFTAII 588
           G  G+LGHGD ++RN P  V   KD   V +V CG   T  +
Sbjct: 530 GDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGSAHTVCV 568



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)

Query: 191 GSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           GSAH    S     +W  G   NG LG  +    Y          PK +E+   + +  +
Sbjct: 561 GSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYK---------PKVIEALQGMVIRKV 611

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHT 308
            CG++ ++ +T  G+++ WG   G  LG G  +A  + P+L+  L   +V  ++ G+ H 
Sbjct: 612 CCGSQCSLALTSTGQVYVWG--CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 669

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T+  ++Y WG+ +      GH +      P+KV G LDG+ +  IS G  HT   T+
Sbjct: 670 VALTQDNNVYAWGNNSMGQCGQGHCT-TPITKPKKVLG-LDGVAVHQISAGTSHTVAWTA 727


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 214/461 (46%), Gaps = 78/461 (16%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           +++   A G RH++L+   G++ S G+   G+LG       +  + I  L  ++V+LV+C
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           G+ H+ AV   G ++ WG G+   G LG G  K +  IP K+   L+ I +  +SCG +H
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGS--EGQLGTGEFKETNLIPMKIK-TLNDIKIKQVSCGHYH 139

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           +  ++  G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+   
Sbjct: 140 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL--- 196

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRL--------GHGDKEPRLFPECVAPLIDENICQ 473
                 S SG++     F WG  + G+L        G   K     P  ++ L +  +  
Sbjct: 197 ------SLSGTS-----FGWGRNNAGQLALHKNNVSGQSYK-----PYSISALKNLGVIY 240

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           ++CG++ +V LT +G V+T G   YGQLG  P A+   P  V+G   +  V ++ CG+YH
Sbjct: 241 ISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYH 298

Query: 533 -VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL-------VDF--------LKDKQVK 576
            +A + +T KV ++G+         +   ++SPT        VDF        L D QVK
Sbjct: 299 TLAYVYTTGKVVSFGR---------EPTCKSSPTHPEALTENVDFTCLISADDLVDFQVK 349

Query: 577 RVVCGLNFTAIICLHKWVSSVD---------HSVCSSCHNPFGFRRKRHNCY----NCGL 623
            +  G  +   +  ++  SS D           +  S    +   +KR  C        +
Sbjct: 350 HIFAG-TYANFVTTYQNTSSTDVPRKILPGISQINESLTEKWIAAKKRTECEVAKSEIAM 408

Query: 624 VF----CKACSSRKSLKAALAPSINKPYRVCDDCFTKLKKT 660
           +F    C   S  K  ++A   SI+   +   D F KL +T
Sbjct: 409 IFSSPACLTASFLKKRESAETTSIDVDLKKARDTFKKLTET 449



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 137/257 (53%), Gaps = 22/257 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ET  + L S     S    H+     G VF WG G + G LG GE +       +
Sbjct: 68  RIRALETLHVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGTGEFK-------E 114

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQ 288
           T+ L+P  +++   + +  ++CG  H++ +++ G++FSWG  S G+LG G++    + PQ
Sbjct: 115 TN-LIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQ 173

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-HGSKVS--CWIPRKVS 345
            +  L G+ +  VA G  H+ A++ SG  + WG    N+G L  H + VS   + P  +S
Sbjct: 174 RVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRN--NAGQLALHKNNVSGQSYKPYSIS 231

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L  + + YISCG  HT V+T  G +FTFGD ++G LGH      S P+ VE + GL  
Sbjct: 232 A-LKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL-V 289

Query: 406 TRVSCGVWHTAAVVVAT 422
           +++ CG +HT A V  T
Sbjct: 290 SQIDCGSYHTLAYVYTT 306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 37/301 (12%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH-GSKVSCWIPRKVSGNLDGI 351
           L GV +   A GE H+  +  +G +++ GD     G LG  G+  S  + R  +  L+ +
Sbjct: 20  LGGVELRQAASGERHSLLLLSNGQVHSCGDN--GRGQLGQRGAPCSAQLKRIRA--LETL 75

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSC 410
           H+  +SCG  H+  V   G +F +G GS G LG G+   T+ IP +++TL  ++  +VSC
Sbjct: 76  HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 135

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDE 469
           G +H+ A+              +  G++F+WG    G+LG G K P +  P+ V  L   
Sbjct: 136 GHYHSLAL--------------SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI 181

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF------- 522
            + QVA G   S AL+ SG  +  G    GQL       L    V G+  + +       
Sbjct: 182 PLAQVAAGGAHSFALSLSGTSFGWGRNNAGQL------ALHKNNVSGQSYKPYSISALKN 235

Query: 523 --VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V  ++CG  H   LT   KV+T+G    GQLGH     ++ P LV+ + D  V ++ C
Sbjct: 236 LGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDC 294

Query: 581 G 581
           G
Sbjct: 295 G 295



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 133/265 (50%), Gaps = 24/265 (9%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILS 294
           K + +   L V  ++CG  H++ V  +G +F+WG  S G+LG G   + +  P  I+ L+
Sbjct: 67  KRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 126

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            + ++ V+CG YH+ A++  G +++WG  +   G LG G K       +   +LDGI L+
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNS--DGQLGLGKKFPSQASPQRVRSLDGIPLA 184

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIS--TSIPREVETLRGLRTTRVSCG 411
            ++ G  H+  ++ +G  F +G  + G L  H +++S  +  P  +  L+ L    +SCG
Sbjct: 185 QVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCG 244

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             HT  +              T  GK+FT+GD   G+LGH     +  P+ V   ID  +
Sbjct: 245 YEHTVVL--------------TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG-IDGLV 289

Query: 472 CQVACG--HDLSVALTTSGHVYTMG 494
            Q+ CG  H L+   TT G V + G
Sbjct: 290 SQIDCGSYHTLAYVYTT-GKVVSFG 313



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A        +  G S+        P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLSGTSFGWGRNNAGQLALHKNNVSGQSYK-------PYSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H V++T+ G++F++G+ + G+LGH   A+ S PQL+E + G+ V
Sbjct: 231 SALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWG 321
             + CG YHT A V  +G + ++G
Sbjct: 290 SQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 163/348 (46%), Gaps = 40/348 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH I+CG  H  +VT  G+++ +G    G+LG G +  V  P  ++ L     +L  CG 
Sbjct: 42  VH-ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGR 100

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G  +   G LG G          +S   +   +  ++ G + +A 
Sbjct: 101 NHTLVYTEKGNVYAAGGNS--EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 158

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           VT  G LF +GD S G +G  D    S+P +V+   G   + +SCG +H+A +       
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHSAFI------- 209

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV------APL--IDENICQVACG 477
                  T  G+L+T+G+ + G+LG       L PE +       P+  I E + +VACG
Sbjct: 210 -------TGDGELYTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVACG 255

Query: 478 HDLSVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
            + +V LT +G VYT G   YGQL  G  +    VP  V   +    +  V CG  H A 
Sbjct: 256 GEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAV 313

Query: 536 LTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +     ++T+G G +G+LG G+++  N+  P L        V  V CG
Sbjct: 314 IAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G   +  G LG GSK +   P  V   L         CG 
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDW--GQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGR 100

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAVV 419
            HT V T  G+++  G  S G LG GD    +    +       +  +++ G + +AAV 
Sbjct: 101 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV- 159

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        T  G+LF WGD  +G++G  DK     P C    + + +  ++CG+ 
Sbjct: 160 -------------TEDGQLFVWGDNSEGQIGLADKTCVSVP-CQVD-VGKPVSSISCGYY 204

Query: 480 LSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +T  G +YT G    G+LG+    + +  VP  V G I E  V +VACG  H   L
Sbjct: 205 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLG-IMEK-VNKVACGGEHTVVL 262

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T T  VYT+G G  GQLGHG    + S P  V  L+  ++  V CG + TA+I
Sbjct: 263 TETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 314



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 24/193 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+  + G +G  + +   S   Q D   P          V +I+CG  H+  +T
Sbjct: 163 GQLFVWGDN-SEGQIGLAD-KTCVSVPCQVDVGKP----------VSSISCGYYHSAFIT 210

Query: 261 KQGEIFSWGEESGGRLG----HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             GE++++GE   G+LG      + + V  P ++ I+  VN   VACG  HT  +T +G 
Sbjct: 211 GDGELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEKVNK--VACGGEHTVVLTETG- 266

Query: 317 LYTWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +YT+G G Y  G LGHG+ +    +P+ V  +L    +  ++CG  HTAV+   G +FTF
Sbjct: 267 VYTFGLGQY--GQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIAENGLMFTF 323

Query: 376 GDGSFGALGHGDH 388
           GDG  G LG G+ 
Sbjct: 324 GDGRHGKLGLGEE 336



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQLIE 291
           +PK+V+   +  +HN+ CG  H  ++ + G +F++G+   G+LG G E  A+   P L  
Sbjct: 289 VPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCS 348

Query: 292 ILSGVNVELVACGEYH 307
                 V LVACG  H
Sbjct: 349 NFLSFTVLLVACGGCH 364


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 142/316 (44%), Gaps = 35/316 (11%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE+ + + +  VA G  H   V     +YTWG+G+   G LGHG  +    P  V   L 
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGS--KGQLGHGDLLGRSKPEMVEA-LK 691

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  +    CG   +  V+  G + T GDGS G LGHGD +S S PR +E L  +    +S
Sbjct: 692 GKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAIS 751

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H  AV               S G++F WG G  G LG GD+E    P+ V      
Sbjct: 752 CGPHHVVAV--------------GSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPV 797

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL------------VPTRVDGE 517
            I +V CG D ++ LT  G V   G+    +LG+    G             VP R    
Sbjct: 798 FIREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPT 857

Query: 518 IAESFVE----EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL--K 571
           +  +       ++A G +H + L    KVYT+G+   GQLG G    R++P  V  L   
Sbjct: 858 VVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSIS 917

Query: 572 DKQVKRVVCGLNFTAI 587
           DK V  + CG  FTA+
Sbjct: 918 DKTVTMLACGDMFTAV 933



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 145/336 (43%), Gaps = 36/336 (10%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           T A+    +E    + +  +A G  H V+V  +  +++WGE S G+LGHG     S P++
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEM 686

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +E L G ++    CG+  +  V+ +G + T GDG+  +G LGHG  +S   PR +   L 
Sbjct: 687 VEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGS--NGCLGHGDWMSASRPRLIEPLLS 744

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            + +  ISCG  H   V S G +F +G G  G LG GD      P+EV+    +    V 
Sbjct: 745 -VDVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVK 803

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-------------- 455
           CGV  T  +              T  G +   G+ +  +LG   ++              
Sbjct: 804 CGVDGTMFL--------------TDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVE 849

Query: 456 --PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP-VADGLVPT 512
              R  P  V  L +     +A G   +  L   G VYT G    GQLG         P 
Sbjct: 850 VPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPM 909

Query: 513 RV-DGEIAESFVEEVACG-AYHVAALTSTSKVYTWG 546
            V D  I++  V  +ACG  +    + S + ++ WG
Sbjct: 910 EVKDLSISDKTVTMLACGDMFTAVGINSENALFFWG 945



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 45/293 (15%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WGEG + G LG G+  +G S         P+ VE+     +    CG   +V V+  
Sbjct: 662 VYTWGEG-SKGQLGHGD-LLGRS--------KPEMVEALKGKSIVRACCGDGFSVFVSDN 711

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G + + G+ S G LGHG     S P+LIE L  V+V  ++CG +H  AV   G+++ WG 
Sbjct: 712 GIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAVGSDGEVFAWGR 771

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           G +  G LG G +   + P++V  + + + +  + CG+  T  +T  G +   G+     
Sbjct: 772 GKH--GCLGLGDEEDHFSPQEVQIS-EPVFIREVKCGVDGTMFLTDMGSVLACGNNENNK 828

Query: 383 LGHG----------------DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           LG                  +     +P  V  L   R   ++ G  HT+ +V       
Sbjct: 829 LGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVEP----- 883

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL--IDENICQVACG 477
                    GK++T+G   +G+LG G  +PR  P  V  L   D+ +  +ACG
Sbjct: 884 ---------GKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACG 927



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 14/192 (7%)

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           +E    ++  +V+ G+ H   VVVA + +            ++TWG+G KG+LGHGD   
Sbjct: 635 IELPAKIKIRQVAVGLEHM--VVVAMERA------------VYTWGEGSKGQLGHGDLLG 680

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG 516
           R  PE V  L  ++I +  CG   SV ++ +G V T G  + G LG          R+  
Sbjct: 681 RSKPEMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIE 740

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            +    V  ++CG +HV A+ S  +V+ WG+G +G LG GD+++  SP  V   +   ++
Sbjct: 741 PLLSVDVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIR 800

Query: 577 RVVCGLNFTAII 588
            V CG++ T  +
Sbjct: 801 EVKCGVDGTMFL 812


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + V +IACG+ H+  +T  G + +WG+   GRLGHG   D   P+L+E L G     +AC
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 304 --GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
             G+  T  +T   ++++WGDG Y  G LG G    C +P K+  +L G+ +  + CG  
Sbjct: 61  GSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQ 117

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +  +T +G ++T+G G F  LGHG  DH+    P++V  L+G +   ++ G  H  A  
Sbjct: 118 FSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVA-- 173

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
             +DS           G+++TWGD D+G+LG G       P  VA L  ++I +V CG  
Sbjct: 174 -CSDS-----------GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 221

Query: 480 LSVALTTS 487
            ++AL+TS
Sbjct: 222 HTLALSTS 229



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 35/300 (11%)

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           ++V  +ACG  H+ A+T SG + TWG G Y  G LGHG       P+ V   L G     
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GYRAID 57

Query: 356 ISCGLW--HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           I+CG     T  +T   +++++GDG +G LG G      +P ++E+L GL   +V CG  
Sbjct: 58  IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQ 117

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
            + A+              T  G ++TWG GD  RLGHG  +    P+ VA L  + I  
Sbjct: 118 FSVAL--------------TKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 163

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           +A G    VA + SG VYT G    GQLG      +   R+   +    + +V CG+ H 
Sbjct: 164 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHT 223

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK----RVVCGLNFTAIIC 589
            AL+++            QL    +   N P   D ++D   +    R++   +F+ ++C
Sbjct: 224 LALSTS------------QLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVC 271



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 18/253 (7%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S++ +   S+H +A     + G V  WG+G   G LG G+           D L PK V
Sbjct: 1   MSVADIACGSAHSAA---ITASGHVLTWGKG-RYGRLGHGD---------SEDQLRPKLV 47

Query: 239 ESTMALDVHNIACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
           E+ +     +IACG+  A  + +T    ++SWG+   G+LG G       P  IE L+G+
Sbjct: 48  EALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGL 107

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            V  V CG   + A+T+SG +YTWG G ++   LGHGS      P+KV+  L G  +  I
Sbjct: 108 GVVKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHGSVDHVRRPKKVAA-LQGKKIISI 164

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           + G  H    + +G ++T+GD   G LG G   +   PR V  L+G    +V+CG  HT 
Sbjct: 165 ATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTL 224

Query: 417 AVVVATDSSSSSP 429
           A+  +  S    P
Sbjct: 225 ALSTSQLSERLRP 237



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           V ++ACG+ H AA+T++  V TWGKG  G+LGHGD +++  P LV+ L   +   + CG 
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 583 NFTAIICL 590
                +C+
Sbjct: 63  GDAQTLCI 70


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 168/339 (49%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H  +VT   +++ +G  + G+LG G E+ VS P  I+ L    V+ VACG  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G  +   G LG G         ++        +  +S G   +A +T 
Sbjct: 100 IVATEGGKVYATGGNS--EGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P +V    G   + VSCG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTI--GKPISWVSCGYYHSAFI---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG   K       P+ V P I E + QVACG   +V LT 
Sbjct: 206 ----TTEGELYTFGEPESGKLGLPSKLLINHRIPQLV-PGIPEKVIQVACGGGHTVVLTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           +  VYT G   +GQLG+   + +   PT ++  I +  +  ++CG  H A +T T  +YT
Sbjct: 261 NA-VYTFGLGQFGQLGLGTFIFETSEPTVIE-HIKDQKISYISCGENHTALITDTGLIYT 318

Query: 545 WGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G ++  N+  PTL    +   V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACG 357



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +ACG+ HT  VT +  LY +G  + N G LG GS+     P  +   L    + +++CG 
Sbjct: 40  LACGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSESPVSKPTCIKA-LKPEKVKFVACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G ++  G  S G LG GD                R T      + +   + 
Sbjct: 97  THTIVATEGGKVYATGGNSEGQLGLGDDED-------------RNTFHRIKFFTSQHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + SSS +  T  G+LF WGD  +G++G  + +    P  V   I + I  V+CG+  
Sbjct: 144 QLSAGSSSSAALTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVT--IGKPISWVSCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +YT G    G+LG+P   + +  +P  V G I E  ++ VACG  H   LT
Sbjct: 202 SAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPG-IPEKVIQ-VACGGGHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S PT+++ +KD+++  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALI 310



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 159/314 (50%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  +++     V  +ACG  H ++ T+ G++++ G  S G+LG G + D +    I+  +
Sbjct: 78  PTCIKALKPEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P +V+    G  +
Sbjct: 138 SQHKIKQLSAGSSSSAALTEDGELFMWGDNS--EGQIGLKNIDNVCVPHQVT---IGKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S++SCG +H+A +T+ G L+TFG+   G LG      I+  IP+ V  +   +  +V+CG
Sbjct: 193 SWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+++            ++T+G G  G+LG G     +F    P  +  + 
Sbjct: 252 GGHT---VVLTENA------------VYTFGLGQFGQLGLGT---FIFETSEPTVIEHIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D+ I  ++CG + +  +T +G +YT G   +G+LG+ +    +  VPT          V+
Sbjct: 294 DQKISYISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCSS-RRFIVQ 352

Query: 525 EVACGAYHVAALTS 538
            VACG  H+    +
Sbjct: 353 LVACGGCHMLVFAT 366


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 52/431 (12%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL--SGVNVELVACGEY 306
           IACG  H   VT   E+++WG+E GGR  + +  +   P  +E L   G+ V  VACGE+
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGRKDNVQ--NTCLPMRMENLHNQGIQVVSVACGEF 507

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           HT A+   G +Y+WG   Y  G LG G   + + P  ++ ++    +  + CG +HT  +
Sbjct: 508 HTIALCEEG-VYSWGSNEY--GQLGVGDTRTRYRPVLIT-HISSKQIVSVVCGAYHTLAI 563

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           TS   ++++G G  G LG     +   P++++ L   +  + + G  H+A +        
Sbjct: 564 TSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVL-------- 615

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 TS   ++T+G    G+LG G    ++ P+ V  L  ++I  ++CG   ++A++ 
Sbjct: 616 ------TSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISE 669

Query: 487 SGHVYTMG-------------SAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACG 529
              ++  G             S+ YG+        L     P  +  ++    + ++ CG
Sbjct: 670 DQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHP-ITQIFCG 728

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            +H   LTS ++VYTWG    GQLGH +K ++++P LV  L  + +  V  G  F+    
Sbjct: 729 NWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF- 787

Query: 590 LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRV 649
                   D ++ +   N  G +    N  N G     + S+R+S+   LAP++      
Sbjct: 788 ------DADDNIMAWGRNDEG-KIGIENEGNLG----NSSSARQSIYCVLAPTLVHGLPS 836

Query: 650 CDDCFTKLKKT 660
            DD F   K +
Sbjct: 837 IDDSFNSSKSS 847



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 14/334 (4%)

Query: 234 LPKAVES--TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           LP  +E+     + V ++ACG  H + + ++G ++SWG    G+LG G       P LI 
Sbjct: 485 LPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLIT 543

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            +S   +  V CG YHT A+T    +Y+WG G +  G LG  S  +   P+++   LD  
Sbjct: 544 HISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVH--GQLGLKSVENQLTPKQIDL-LDSH 600

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +   + G  H+AV+TS  +++TFG   +G LG G H    IP+ V++L       +SCG
Sbjct: 601 KVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCG 660

Query: 412 VWHTAAVVVATDSS----SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
            + T A  ++ D +      +      C K  +   G K      D   R +PE +   +
Sbjct: 661 PFETIA--ISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQL 718

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEV 526
              I Q+ CG+   + LT+   VYT G    GQLG     D   P  V   I  + +  V
Sbjct: 719 QHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAII-GV 777

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           A GA    A  +   +  WG+   G++G  ++ N
Sbjct: 778 AVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGN 811



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 132/318 (41%), Gaps = 45/318 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V+ WG     G LG G+ R  Y          P  +    +  + ++ CGA H + +T  
Sbjct: 517 VYSWGSN-EYGQLGVGDTRTRYR---------PVLITHISSKQIVSVVCGAYHTLAITSD 566

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            +++SWG    G+LG     +   P+ I++L    V   A G  H+  +T    +YT+G 
Sbjct: 567 YKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGA 626

Query: 323 GTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD---- 377
             Y  G LG GS     IP+ V S  LD I+L  ISCG + T  ++    +F +G     
Sbjct: 627 DLY--GQLGIGSHYKQVIPQLVDSLTLDSIYL--ISCGPFETIAISEDQTIFCWGRNYHQ 682

Query: 378 ------------GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
                       G   A    D      P  ++       T++ CG WH   +       
Sbjct: 683 FYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIIL------- 735

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  TS  +++TWG  D G+LGH +K  +  P  V  LI   I  VA G + SVA  
Sbjct: 736 -------TSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFD 788

Query: 486 TSGHVYTMGSAAYGQLGV 503
              ++   G    G++G+
Sbjct: 789 ADDNIMAWGRNDEGKIGI 806



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-VEEVACGAY 531
           ++ACG +    +T +  +YT G    G+    V +  +P R++    +   V  VACG +
Sbjct: 449 RIACGRNHIAFVTNNKELYTWGKECGGRKD-NVQNTCLPMRMENLHNQGIQVVSVACGEF 507

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H  AL     VY+WG    GQLG GD   R  P L+  +  KQ+  VVCG   T  I
Sbjct: 508 HTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAI 563


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+   G+LG GR  A  S P+++E LSGV +  ++ 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE H+ A++ SG++Y+WG    + G LG G   +   P  +   LD   + +++CG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 269

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T +G +FTFGDG +G LGH    +   PR V  L G R T+++CG  HT A V  T 
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT- 328

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                       GK+F++G G +G+LG+G    +L P
Sbjct: 329 ------------GKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  G  H ++++  G+ F +            +  + H +   IL 
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 150

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  + CG+YH+ A+++ G+L+ WG      G LG G   +     ++  NL G+ L 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWGQNL--DGQLGVGRIFASTSTPEIVENLSGVPLV 208

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   +   P  +E L   +   ++CG  H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 268

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+GDG  G+LGH   +  L P  V  L+   + Q+
Sbjct: 269 TALL--------------TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 314

Query: 475 ACGHDLSVA-LTTSGHVYTMGSAAYGQLG 502
           ACG   ++A ++ +G V++ GS   GQLG
Sbjct: 315 ACGRQHTLAYVSDTGKVFSFGSGKEGQLG 343



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 18/208 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+  +    P+ VE+   + +  I+
Sbjct: 161 DYHSLALSKGGELFAWGQNL-DGQLG-----VGRIFASTST---PEIVENLSGVPLVQIS 211

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G   +   P  IE L    VE +ACG  HT  
Sbjct: 212 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 271

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+SG ++T+GDG Y  G LGH S  +   PR V+G L G  ++ I+CG  HT A V+  
Sbjct: 272 LTKSGLVFTFGDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDT 328

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREV 397
           G +F+FG G  G LG+G   +  IPR +
Sbjct: 329 GKVFSFGSGKEGQLGNGGTRNQLIPRPM 356



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    STS P  VE L G+   ++S G  H
Sbjct: 157 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 216

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G    +  P C+  L D+ +  +
Sbjct: 217 SMALSMS--------------GNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFL 262

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT SG V+T G   YGQLG     + L P  V G +    V ++ACG  H 
Sbjct: 263 ACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR-VTQIACGRQHT 321

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S T KV+++G G  GQLG+G   N+  P
Sbjct: 322 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 25/185 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G    R+F     P 
Sbjct: 156 QITCGDYHSLAL--------------SKGGELFAWGQNLDGQLGVG----RIFASTSTPE 197

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAE 520
           I EN+      Q++ G   S+AL+ SG+VY+ G    GQLG+    +   P+ ++  + +
Sbjct: 198 IVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDD 256

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT +  V+T+G G  GQLGH    N   P LV  L   +V ++ C
Sbjct: 257 QKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 316

Query: 581 GLNFT 585
           G   T
Sbjct: 317 GRQHT 321



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 9/132 (6%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
           +C+  L ++NI Q+ CG   S+AL+  G ++  G    GQLGV     +  +    EI E
Sbjct: 146 QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV---GRIFASTSTPEIVE 200

Query: 521 SF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           +     + +++ G  H  AL+ +  VY+WG+   GQLG G   N+ SP+ ++ L D++V+
Sbjct: 201 NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVE 260

Query: 577 RVVCGLNFTAII 588
            + CG   TA++
Sbjct: 261 FLACGGCHTALL 272


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAVSKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVIFAA 366



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 154/322 (47%), Gaps = 33/322 (10%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE---ILSGVNVELVACGEY 306
           ACG  H V +T++G ++SWG  +G  LGHG       P+ ++   I S  ++  +ACGE+
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSITTIACGEF 62

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           HT AV + G L+TWG   Y  G LGHG   +  +PR+V      I +   + G  H+ V+
Sbjct: 63  HTLAVGQDGTLWTWGRNQY--GQLGHGDCKTHKLPRRVEALEKKICIK-AAAGGQHSLVL 119

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           T A  ++ FG   FG LG    +  S  P  V  LR      ++CG  H+ A++ +    
Sbjct: 120 TEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSE--- 176

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                      +L++WG  D G+LG G       PE +       + Q++CG+D ++A  
Sbjct: 177 -----------QLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFV 225

Query: 486 TS---------GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           +            VYT G    GQLG   +    VP  V   +A   +  VA G +  AA
Sbjct: 226 SEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARG-IRAVAAGGFSSAA 284

Query: 536 LTSTSKVYTWGKGANGQLGHGD 557
           +    ++YTWG    GQLGHGD
Sbjct: 285 IDEAKQLYTWGCSREGQLGHGD 306



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 146/305 (47%), Gaps = 41/305 (13%)

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL--DGIHLSYISCG 359
           ACG+ HT A+T  G +Y+WG     +G LGHG+  S  +P+ +   L      ++ I+CG
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCA---NGALGHGNSKSQLLPKALDRPLIYSMPSITTIACG 60

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +HT  V   G L+T+G   +G LGHGD  +  +PR VE L      + + G  H+  + 
Sbjct: 61  EFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVL- 119

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECVAPLIDENICQVACGH 478
                        T   K++ +G    G+LG   K +    P+ V+ L    +C + CG+
Sbjct: 120 -------------TEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGY 166

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGV------PVADGLVPTRVDGEIAESFVEEVACGAYH 532
             S+AL  S  +Y+ G    GQLG+      PV + L   +      +S V++++CG  H
Sbjct: 167 SHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFK------KSQVQQISCGYDH 220

Query: 533 VAALTS---------TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
             A  S           KVYTWG+G  GQLGH +  +R  P +V  L  + ++ V  G  
Sbjct: 221 NIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGF 280

Query: 584 FTAII 588
            +A I
Sbjct: 281 SSAAI 285



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 142/305 (46%), Gaps = 21/305 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD---VHNIACGARHAV 257
           G V+ WG   ANG LG G  +           LLPKA++  +      +  IACG  H +
Sbjct: 17  GRVYSWG--CANGALGHGNSK---------SQLLPKALDRPLIYSMPSITTIACGEFHTL 65

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
            V + G +++WG    G+LGHG       P+ +E L        A G  H+  +T +  +
Sbjct: 66  AVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKV 125

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y +G   +  G LG  SKV       +   L    + +I+CG  H+  +  +  L+++G 
Sbjct: 126 YAFGSNVF--GQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGR 183

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
              G LG G + S+ +P  +   +  +  ++SCG  H  A V     S  +  G     K
Sbjct: 184 NDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFV-----SEYAGPGVPPLEK 238

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           ++TWG G++G+LGH +   R  P+ V  L+   I  VA G   S A+  +  +YT G + 
Sbjct: 239 VYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSR 298

Query: 498 YGQLG 502
            GQLG
Sbjct: 299 EGQLG 303



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 12/164 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V       V +I CG  H++ + K  +++SWG    G+LG G       P+ + +  
Sbjct: 148 PDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFK 207

Query: 295 GVNVELVACG---------EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
              V+ ++CG         EY    V     +YTWG G    G LGH    S  +P KV 
Sbjct: 208 KSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRG--EEGQLGHDELYSRCVP-KVV 264

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
             L    +  ++ G + +A +  A  L+T+G    G LGHGD I
Sbjct: 265 QTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLGHGDDI 308


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+   G+LG GR  A  S P+++E LSGV +  ++ 
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE H+ A++ SG++Y+WG    + G LG G   +   P  +   LD   + +++CG  HT
Sbjct: 208 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 264

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T +G +FTFGDG +G LGH    +   PR V  L G R T+++CG  HT A V  T 
Sbjct: 265 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT- 323

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                       GK+F++G G +G+LG+G    +L P
Sbjct: 324 ------------GKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  G  H ++++  G+ F +            +  + H +   IL 
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 145

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  + CG+YH+ A+++ G+L+ WG      G LG G   +     ++  NL G+ L 
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWGQNL--DGQLGVGRIFASTSTPEIVENLSGVPLV 203

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   +   P  +E L   +   ++CG  H
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 263

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+GDG  G+LGH   +  L P  V  L+   + Q+
Sbjct: 264 TALL--------------TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 309

Query: 475 ACGHDLSVA-LTTSGHVYTMGSAAYGQLG 502
           ACG   ++A ++ +G V++ GS   GQLG
Sbjct: 310 ACGRQHTLAYVSDTGKVFSFGSGKEGQLG 338



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 18/208 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+  +    P+ VE+   + +  I+
Sbjct: 156 DYHSLALSKGGELFAWGQNL-DGQLG-----VGRIFASTST---PEIVENLSGVPLVQIS 206

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G   +   P  IE L    VE +ACG  HT  
Sbjct: 207 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 266

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+SG ++T+GDG Y  G LGH S  +   PR V+G L G  ++ I+CG  HT A V+  
Sbjct: 267 LTKSGLVFTFGDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDT 323

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREV 397
           G +F+FG G  G LG+G   +  IPR +
Sbjct: 324 GKVFSFGSGKEGQLGNGGTRNQLIPRPM 351



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    STS P  VE L G+   ++S G  H
Sbjct: 152 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 211

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G    +  P C+  L D+ +  +
Sbjct: 212 SMALSMS--------------GNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFL 257

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT SG V+T G   YGQLG     + L P  V G +    V ++ACG  H 
Sbjct: 258 ACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR-VTQIACGRQHT 316

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S T KV+++G G  GQLG+G   N+  P
Sbjct: 317 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 25/185 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G    R+F     P 
Sbjct: 151 QITCGDYHSLAL--------------SKGGELFAWGQNLDGQLGVG----RIFASTSTPE 192

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAE 520
           I EN+      Q++ G   S+AL+ SG+VY+ G    GQLG+    +   P+ ++  + +
Sbjct: 193 IVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDD 251

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT +  V+T+G G  GQLGH    N   P LV  L   +V ++ C
Sbjct: 252 QKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 311

Query: 581 GLNFT 585
           G   T
Sbjct: 312 GRQHT 316



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 9/132 (6%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
           +C+  L ++NI Q+ CG   S+AL+  G ++  G    GQLGV     +  +    EI E
Sbjct: 141 QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV---GRIFASTSTPEIVE 195

Query: 521 SF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           +     + +++ G  H  AL+ +  VY+WG+   GQLG G   N+ SP+ ++ L D++V+
Sbjct: 196 NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVE 255

Query: 577 RVVCGLNFTAII 588
            + CG   TA++
Sbjct: 256 FLACGGCHTALL 267


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 171/343 (49%), Gaps = 30/343 (8%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G  H++L+   G + S G+ S G+LG         P+ I  L  +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           AV   G ++ WG  +   G LG G  K + +IP+K+   L GI +  ++CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 369 AGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 428 SPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHDLSVAL 484
           S SG++     F WG    G+L   G+  P  R  P  +  L    +  ++CG+  +  L
Sbjct: 197 SLSGTS-----FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKV 542
           T  G V+T G  +YGQLG  P A+   P  V  E  E  V ++ CG+ H +A + +T +V
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV--ERIEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 543 YTWGKGAN--GQLGHGDKDNRNSPTLVDF--LKDKQVKRVVCG 581
            ++G+G     +  H   ++ +   LV    L D QVK +  G
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAG 352



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 18/256 (7%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +R  A ET  ++L S     S    H+     G VF WG   + G LG GE +       
Sbjct: 67  ERIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLGIGEFK------- 113

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHP 287
                +PK +++   + +  +ACG  H+V +++ G++FSWG  S G+LG G+E    + P
Sbjct: 114 -ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASP 172

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSG 346
           Q +  L G+ +  VA G +H+ A++ SG  + WG  +     L G+ + V  + P  + G
Sbjct: 173 QRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-G 231

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L  + +  ISCG  HTAV+T  G +FTFGD S+G LGH        P+ VE + GL  +
Sbjct: 232 ALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VS 290

Query: 407 RVSCGVWHTAAVVVAT 422
           ++ CG  HT A +  T
Sbjct: 291 QIDCGSDHTLAYIYTT 306



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 22/265 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ + +   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   + +  P+ I+ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  VACG YH+ A++  G +++W  GT + G LG G +       +   +L+GI L
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSW--GTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  S G L   G+   +    P  +  L+ L    +SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LGH     +  P+ V   I+  
Sbjct: 244 GYKHTAVL--------------TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGL 288

Query: 471 ICQVACGHDLSVA-LTTSGHVYTMG 494
           + Q+ CG D ++A + T+G V + G
Sbjct: 289 VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 26/264 (9%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H+ ++ S G + + GD S G LG         P  +  L  L    VSCG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACG 477
                            G++F WG   +G+LG G+ KE    P+ +  L    I QVACG
Sbjct: 91  CHK--------------GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACG 136

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHV 533
           H  SVAL+  G V++ G+ ++GQLG+       P++   +   S     + +VA G +H 
Sbjct: 137 HYHSVALSEDGQVFSWGTNSHGQLGLGKE---FPSQASPQRVRSLEGIPLAQVAAGGHHS 193

Query: 534 AALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            AL+ +   + WG  + GQL   G+     R  P  +  LK   V  + CG   TA++  
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 591 HKWVSSV-DHSVCSSCHNPFGFRR 613
              V +  D+S     H+P   +R
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKR 277



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +   L V +I+CG +H  ++T+ G++F++G+ S G+LGH   A+   PQL+E + 
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGH----GSKVSCWIPRKVSGNLD 349
           G+ V  + CG  HT A +  +G + ++G G   +    H     S +SC +  K   +L 
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAK---DLA 342

Query: 350 GIHLSYISCGLWHTAV 365
            + + +I  G +   V
Sbjct: 343 DVQVKHIFAGTYANFV 358


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 171/343 (49%), Gaps = 30/343 (8%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G  H++L+   G + S G+ S G+LG         P+ I  L  +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           AV   G ++ WG  +   G LG G  K + +IP+K+   L GI +  ++CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 369 AGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 428 SPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHDLSVAL 484
           S SG++     F WG    G+L   G+  P  R  P  +  L    +  ++CG+  +  L
Sbjct: 197 SLSGTS-----FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKV 542
           T  G V+T G  +YGQLG  P A+   P  V  E  E  V ++ CG+ H +A + +T +V
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV--ERIEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 543 YTWGKGAN--GQLGHGDKDNRNSPTLVDF--LKDKQVKRVVCG 581
            ++G+G     +  H   ++ +   LV    L D QVK +  G
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAG 352



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 18/256 (7%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +R  A ET  ++L S     S    H+     G VF WG   + G LG GE +       
Sbjct: 67  ERIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLGIGEFK------- 113

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHP 287
                +PK +++   + +  +ACG  H+V +++ G++FSWG  S G+LG G+E    + P
Sbjct: 114 -ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASP 172

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSG 346
           Q +  L G+ +  VA G +H+ A++ SG  + WG  +     L G+ + V  + P  + G
Sbjct: 173 QRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-G 231

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L  + +  ISCG  HTAV+T  G +FTFGD S+G LGH        P+ VE + GL  +
Sbjct: 232 ALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VS 290

Query: 407 RVSCGVWHTAAVVVAT 422
           ++ CG  HT A +  T
Sbjct: 291 QIDCGSDHTLAYIYTT 306



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 22/265 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ + +   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   + +  P+ I+ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  VACG YH+ A++  G +++W  GT + G LG G +       +   +L+GI L
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSW--GTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  S G L   G+   +    P  +  L+ L    +SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LGH     +  P+ V   I+  
Sbjct: 244 GYKHTAVL--------------TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGL 288

Query: 471 ICQVACGHDLSVA-LTTSGHVYTMG 494
           + Q+ CG D ++A + T+G V + G
Sbjct: 289 VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 26/264 (9%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H+ ++ S G + + GD S G LG         P  +  L  L    VSCG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACG 477
                            G++F WG   +G+LG G+ KE    P+ +  L    I QVACG
Sbjct: 91  CHK--------------GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACG 136

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHV 533
           H  SVAL+  G V++ G+ ++GQLG+       P++   +   S     + +VA G +H 
Sbjct: 137 HYHSVALSEDGQVFSWGTNSHGQLGLGKE---FPSQASPQRVRSLEGIPLAQVAAGGHHS 193

Query: 534 AALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            AL+ +   + WG  + GQL   G+     R  P  +  LK   V  + CG   TA++  
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 591 HKWVSSV-DHSVCSSCHNPFGFRR 613
              V +  D+S     H+P   +R
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKR 277



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +   L V +I+CG +H  ++T+ G++F++G+ S G+LGH   A+   PQL+E + 
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGH----GSKVSCWIPRKVSGNLD 349
           G+ V  + CG  HT A +  +G + ++G G   +    H     S +SC +  K   +L 
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAK---DLA 342

Query: 350 GIHLSYISCGLWHTAV 365
            + + +I  G +   V
Sbjct: 343 DVQVKHIFAGTYANFV 358


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  L+T   +++ +G  + G+LG G +  V+ P  ++ L    V++ ACG  HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G  +   G LG G        + VS       +  +S G   +A +T 
Sbjct: 100 LVYTEEGKVYAAGGNS--EGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P EV    G   + +SCG +H+A V          
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEVTI--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG   ++ +    P+ V   I   + QVACG   +VALT 
Sbjct: 206 ----TTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLG-IPGKVNQVACGGGHTVALTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +   P +V   +    ++ +ACG  H A ++ T  +YT
Sbjct: 261 E-EVYTFGLGQFGQLGLGTFIFETSEP-KVVKHLQNQKIQYIACGENHTALISDTGHMYT 318

Query: 545 WGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
           +G G +G+LG G ++  N+  PTL  +FLK   V+ V CG
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLK-FIVRLVACG 357



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 35/309 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T++G++++ G  S G+LG G   + +  QL+   +
Sbjct: 78  PTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G   + +  +P +V+    G  +
Sbjct: 138 AQHKIKQLSAGSNTSAALTEDGVLFMWGDNS--EGQIGLAEEANVCVPSEVT---IGKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG       +  IP+ V  + G +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPG-KVNQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT A+                  +++T+G G  G+LG G     +F    P+ V  L 
Sbjct: 252 GGHTVALTEE---------------EVYTFGLGQFGQLGLG---TFIFETSEPKVVKHLQ 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVE 524
           ++ I  +ACG + +  ++ +GH+YT G   +G+LG+      +  VPT       +  V 
Sbjct: 294 NQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSN-FLKFIVR 352

Query: 525 EVACGAYHV 533
            VACG  H+
Sbjct: 353 LVACGGCHM 361



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 139/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  +T +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHTALITGNSKLYMFG--SNNWGQLGLGSKTTVNKPTCVKA-LKPEKVKIAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G ++  G  S G LG GD                RTT      +     + 
Sbjct: 97  NHTLVYTEEGKVYAAGGNSEGQLGLGDTEE-------------RTTFQLVSFFTAQHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G LF WGD  +G++G  ++     P  V   I + I  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVT--IGKPISWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +YT G    G+LG+    + +  +P  V G      V +VACG  H  ALT
Sbjct: 202 SAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLG--IPGKVNQVACGGGHTVALT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
              +VYT+G G  GQLG G      S P +V  L++++++ + CG N TA+I
Sbjct: 260 E-EEVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 20/224 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+  + G +G          + + +  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GVLFMWGDN-SEGQIG---------LAEEANVCVPSEV--TIGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG   E   +H  PQL+  + G  V  VACG  HT A+T   ++Y
Sbjct: 207 TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALTEE-EVY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  +L    + YI+CG  HTA+++  GH++TFGDG
Sbjct: 265 TFGLGQF--GQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDG 322

Query: 379 SFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVV 420
             G LG G    T+  +P             V+CG  H     +
Sbjct: 323 RHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVFAI 366


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 57/371 (15%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IACG  H + +   G+++S G    G+LGH +    S P+ ++ L    +  +ACGE H+
Sbjct: 129 IACGRAHTLFLV-DGQVYSCGSNDQGQLGHKKHR--SKPERVDALEPYTITQIACGETHS 185

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-------------NLDGIHLSY 355
            A+T +G ++ WGD    +  LG     S   P   S               LD   L+Y
Sbjct: 186 LALTSNGQVFAWGDN--KASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAY 243

Query: 356 --------------------ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
                               I CG   + V++  G +F +GD + G L   +  +  +P 
Sbjct: 244 MDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPT 303

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
            V+ L G+   +++ G  HT A+              T  G++++WG+   G+LG GD  
Sbjct: 304 LVKELYGIPIRQLAAGGRHTLAL--------------TFNGQVYSWGNNQFGQLGVGDTA 349

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD 515
           P   P  +  L  +    +ACG D SV LT +G VY+ G+   GQLG       +  R+ 
Sbjct: 350 PHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMI 409

Query: 516 GEIAESFVEEVACGAYH-VAALTSTSKVYTWGKGANGQLGHG----DKDNRNSPTLVDFL 570
            E+      +V CG  H +     T+K+Y +G G NGQLG G     + +  +P LV  L
Sbjct: 410 FELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVL 469

Query: 571 KDKQVKRVVCG 581
               + R+  G
Sbjct: 470 DATPILRIATG 480



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 20/271 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ V +     +  I CGA  +++++++G++F+WG+ + G+L       V  P L++ L 
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELY 309

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G+ +  +A G  HT A+T +G +Y+WG+  +  G LG G      IP ++   L+    +
Sbjct: 310 GIPIRQLAAGGRHTLALTFNGQVYSWGNNQF--GQLGVGDTAPHTIPSRLK-TLEHQFCA 366

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           +I+CG  H+ V+T  G +++FG G  G LGHG   +   PR +  L G   ++V CG  H
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRH 426

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPR---LFPECVAPLIDEN 470
           T      T+             K++ +G G  G+LG G   EP+   L P  V  L    
Sbjct: 427 TIVFFPKTN-------------KIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATP 473

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           I ++A G   S      G+   +G+A   QL
Sbjct: 474 ILRIATGASASHCFAVVGNRNHVGAAESAQL 504



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 110/270 (40%), Gaps = 53/270 (19%)

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           S I+CG  HT  +   G +++ G    G LGH  H S   P  V+ L     T+++CG  
Sbjct: 127 SAIACGRAHTLFLVD-GQVYSCGSNDQGQLGHKKHRSK--PERVDALEPYTITQIACGET 183

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE-----------PRLF--- 459
           H+ A+              TS G++F WGD    +LG    E           P+     
Sbjct: 184 HSLAL--------------TSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAAS 229

Query: 460 --------------------PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
                               P  V  L    I Q+ CG + S+ L+  G V+  G    G
Sbjct: 230 IDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG 289

Query: 500 QLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           QL +     + VPT V  E+    + ++A G  H  ALT   +VY+WG    GQLG GD 
Sbjct: 290 QLCLRELKTVPVPTLVK-ELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDT 348

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                P+ +  L+ +    + CG + + ++
Sbjct: 349 APHTIPSRLKTLEHQFCAHIACGEDHSVVL 378



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTMALDVHNIACGARHAVLV 259
           GDVF WG+  +           G    R+   + +P  V+    + +  +A G RH + +
Sbjct: 278 GDVFAWGDNTS-----------GQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLAL 326

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T  G+++SWG    G+LG G  A  + P  ++ L       +ACGE H+  +T +G +Y+
Sbjct: 327 TFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYS 386

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV-VTSAGHLFTFGDG 378
           +G G    G LGHG+  +   PR +   L G   S + CG  HT V       ++ FG G
Sbjct: 387 FGAG--GQGQLGHGTLQNEINPRMIF-ELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLG 443

Query: 379 SFGALGHG------DHISTSIPREVETLRGLRTTRVSCG--VWHTAAVV 419
             G LG G       H+ T  P  V  L      R++ G    H  AVV
Sbjct: 444 GNGQLGTGVGVEPQQHVLT--PMLVRVLDATPILRIATGASASHCFAVV 490


>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
          Length = 660

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 40/380 (10%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG--H 278
            + +S ++Q     P+  ++   + +  I+    H+  V+  G+++  G    G+LG  +
Sbjct: 70  ELSFSQTKQQFYSKPENPKNLEKIYIKQISTSQNHSSCVSSNGDLYVCGSALHGKLGLEN 129

Query: 279 GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
              A+++  Q++  L G+ V  VACG+YHT A+T +  +Y WG GT    +   G K   
Sbjct: 130 LTMANINKFQILTALKGIKVLQVACGDYHTLALTENDQVYAWG-GTLYKKVGQRGGK--- 185

Query: 339 WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG----SFGALGHGDHISTSIP 394
             P  +   L    ++YI CG +H+  +T+ G ++T+G G    + G LG G      IP
Sbjct: 186 --PGPIH-QLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIP 242

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
            +++  +  +  +VSCG +HT A++                 +L+ WG G+ G LG G  
Sbjct: 243 EQIQFFKNKKVIKVSCGQFHTMALI--------------DDNQLYGWGAGELGELGSGKV 288

Query: 455 EPRLFPECVAPLI-------------DENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
              L+   +  L              D  I  + CG   ++ L   G+VY+ G  +YGQL
Sbjct: 289 LYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQL 348

Query: 502 GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
           G+   +     ++   + +  + ++A G  H   LT T+ V++ G  A GQLG GD+++R
Sbjct: 349 GLKTTNNHCEFQLVWTLTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESR 408

Query: 562 NSPTLVDFLKDKQVKRVVCG 581
              T +  L  K V  +  G
Sbjct: 409 TLFTHISALAGKNVVEISAG 428



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 152/344 (44%), Gaps = 40/344 (11%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           +++WG+   G L     ++   S P+  + L  + ++ ++  + H+  V+ +GDLY  G 
Sbjct: 60  VYAWGKNEYGELSFSQTKQQFYSKPENPKNLEKIYIKQISTSQNHSSCVSSNGDLYVCGS 119

Query: 323 GTYNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
             +  G LG  +     I + ++   L GI +  ++CG +HT  +T    ++ +G   + 
Sbjct: 120 ALH--GKLGLENLTMANINKFQILTALKGIKVLQVACGDYHTLALTENDQVYAWGGTLYK 177

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            +G         P  +  L     T + CG +H+ A+              T+ G ++TW
Sbjct: 178 KVGQ----RGGKPGPIHQLTNKGVTYIDCGDFHSVAI--------------TNQGDIYTW 219

Query: 442 GDG----DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           G G    +KG+LG G  +    PE +    ++ + +V+CG   ++AL     +Y  G+  
Sbjct: 220 GGGGQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGE 279

Query: 498 YGQLG-------------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            G+LG             + +   +   + +    +  + ++ CG +H   L +   VY+
Sbjct: 280 LGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYS 339

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G G+ GQLG    +N     LV  L  K++ ++  G N + ++
Sbjct: 340 TGYGSYGQLGLKTTNNHCEFQLVWTLTKKKIIKIAAGWNHSLVL 383



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 32/266 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGE----ESGGRLGHGREADVSHPQLI 290
           P  +       V  I CG  H+V +T QG+I++WG     ++ G+LG G   D+  P+ I
Sbjct: 186 PGPIHQLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQI 245

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS------------KVSC 338
           +      V  V+CG++HT A+     LY WG G    G LG G                 
Sbjct: 246 QFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGEL--GELGSGKVLYFLYLLIILILKKY 303

Query: 339 WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE 398
               K +       +S I CG  HT ++ + G++++ G GS+G LG     +    + V 
Sbjct: 304 ITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTNNHCEFQLVW 363

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL 458
           TL   +  +++ G W+ + V+  T+              +F+ G    G+LG GD+E R 
Sbjct: 364 TLTKKKIIKIAAG-WNHSLVLTDTND-------------VFSCGYNAWGQLGLGDEESRT 409

Query: 459 FPECVAPLIDENICQVACGHDLSVAL 484
               ++ L  +N+ +++ G   S A+
Sbjct: 410 LFTHISALAGKNVVEISAGGSHSWAI 435


>gi|302820496|ref|XP_002991915.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
 gi|300140301|gb|EFJ07026.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
          Length = 253

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 85/111 (76%), Gaps = 3/111 (2%)

Query: 2   LIWYSGKEERQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY-NDRSLDLICKDKD 60
           LIWYSGKEE+ L+L+ ++RI+PGQRTA FQRYPR EKEYQSFSLIY NDRSLDLICKDKD
Sbjct: 43  LIWYSGKEEKSLRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGNDRSLDLICKDKD 102

Query: 61  EAEVWLVGLKALITRGTHSKWKLGTIN-CSTSSDS-PRARIRKTSPTVTPF 109
           EAEVW VGLKAL++ G  S+ +  + + C   SDS   A   + SP  +PF
Sbjct: 103 EAEVWFVGLKALVSGGQLSRLRFDSRSECGPPSDSNSPATWSRISPASSPF 153


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR    +  PQL+E LSGV +  ++ G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A++ SG++Y+WG    + G LG G       P  +   LD   + +++CG  HTA
Sbjct: 439 KAHSMALSMSGNIYSWGRN--DLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTA 495

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G +FTFG G +G LGH    +   PR V  L G R T+V+CG WHT A V     
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYV----- 550

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 551 --------SDLGKVFSFGSGKEGQLGNGGTHNQLIP 578



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP--REVETLRGLRTTRVSCGVW 413
           I+CG +H+  ++  G LF +G    G LG G  + TSIP  + VE L G+   ++S G  
Sbjct: 382 ITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RLFTSIPTPQLVEHLSGVPLVQISAGKA 440

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           H+ A+ ++              G +++WG  D G+LG G      FP  +  L ++ +  
Sbjct: 441 HSMALSMS--------------GNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEF 486

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           +ACG   +  LT  G V+T G+  YGQLG       +  R+  E+A + V +VACG +H 
Sbjct: 487 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHT 546

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G  GQLG+G   N+  P  +    ++++K
Sbjct: 547 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 590



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 29/260 (11%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + +H++  GA H ++++  G+ F +               + H +   IL   ++  + C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 384

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+YH+ A+++ G+L+ WG   +  G LG G   +     ++  +L G+ L  IS G  H+
Sbjct: 385 GDYHSLALSKGGELFAWGQNLH--GQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHS 442

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             ++ +G+++++G    G LG G       P  +E L   +   ++CG  HTA +     
Sbjct: 443 MALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALL----- 497

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T  G +FT+G G  G+LGH   +  L P  V  L    + QVACG   ++A
Sbjct: 498 ---------TKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLA 548

Query: 484 LTTS-GHVYTMGSAAYGQLG 502
             +  G V++ GS   GQLG
Sbjct: 549 YVSDLGKVFSFGSGKEGQLG 568



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 386 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRLF---TSIPTPQLVEHLSGVPLVQIS 436

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG    G+LG G       P LIE L    VE +ACG  HT  
Sbjct: 437 AGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTAL 496

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G ++T+G G Y  G LGH S  +   PR V+  L G  ++ ++CG WHT A V+  
Sbjct: 497 LTKDGLVFTFGAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQVACGRWHTLAYVSDL 553

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 554 GKVFSFGSGKEGQLGNGGTHNQLIP 578



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 25/181 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-----PE 461
           +++CG +H+ A+              +  G+LF WG    G+LG G    RLF     P+
Sbjct: 381 QITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG----RLFTSIPTPQ 422

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
            V  L    + Q++ G   S+AL+ SG++Y+ G    GQLG+   +G   P+ ++  +  
Sbjct: 423 LVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDN 481

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT    V+T+G G  GQLGH    N   P LV  L   +V +V C
Sbjct: 482 QKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVAC 541

Query: 581 G 581
           G
Sbjct: 542 G 542



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIA 519
           +C+  L +++I Q+ CG   S+AL+  G ++  G   +GQLGV      +PT ++   ++
Sbjct: 371 QCI--LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLS 428

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + +++ G  H  AL+ +  +Y+WG+   GQLG G  +  + P+L++ L +++V+ + 
Sbjct: 429 GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLA 488

Query: 580 CGLNFTAII 588
           CG + TA++
Sbjct: 489 CGGSHTALL 497


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 45/368 (12%)

Query: 213 GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
           GFL G +  +      +T  ++  A  S   + V  IA G RH + +   G+++S G   
Sbjct: 42  GFLNGDDGNI-----VKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCGSNE 96

Query: 273 GGRLGHG--READVS-HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGL 329
            G LG G  +E   + +P L+    GVN+  +A G  H  AV   G L+ WG  ++  G 
Sbjct: 97  NGELGRGGCQEGSFTIYPVLLS--GGVNIVQIAAGRAHNMAVADDGRLFAWGSNSH--GQ 152

Query: 330 LGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH 388
           L   S + S  IP++V    + +    ++CG  HT  +  +G +F +G    G + +   
Sbjct: 153 LALPSNITSTDIPKRVVSLTETVQ---VACGTDHTIAIVESGRIFVWGLQPDGRVLYA-- 207

Query: 389 ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
                P+E+E    L   +V+ G  +  A+ V+              G +F WG  + G+
Sbjct: 208 -----PKEIEFFMALPVVQVNAGSDYYVALTVS--------------GAMFVWGSNEYGQ 248

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VP 504
           LG  D + R  P  V  L   N+  VACGH  +VALT  G ++  GS + GQLG    VP
Sbjct: 249 LGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLGSGRKVP 308

Query: 505 VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
             + ++      E+  + V  VACG  H  AL    K+Y +G  ++GQLG G+  ++ +P
Sbjct: 309 SQNTMLAVT---EMLGTHVTRVACGRCHTLALAG-GKMYAFGLNSSGQLGSGNVRSQVTP 364

Query: 565 TLVDFLKD 572
             +D L D
Sbjct: 365 RPIDALTD 372



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 109/267 (40%), Gaps = 29/267 (10%)

Query: 321 GDGTY-NSGLLGHGSKVSCWIPRKVSG---NLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           GDG   N G L          P+ V G   + DG+ +  I+ G  HT  +   G +++ G
Sbjct: 34  GDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCG 93

Query: 377 DGSFGALGHGDHISTSIPREVETLRG-LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
               G LG G     S       L G +   +++ G  H  AV  A D            
Sbjct: 94  SNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAV--ADD------------ 139

Query: 436 GKLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+LF WG    G+L    +      P+ V  L +    QVACG D ++A+  SG ++  G
Sbjct: 140 GRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTET--VQVACGTDHTIAIVESGRIFVWG 197

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               G++         P  ++  +A   V+  A   Y+VA LT +  ++ WG    GQLG
Sbjct: 198 LQPDGRVLY------APKEIEFFMALPVVQVNAGSDYYVA-LTVSGAMFVWGSNEYGQLG 250

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             D   R +P  V  L    V  V CG
Sbjct: 251 TSDNKERTTPAEVTTLHSLNVVHVACG 277


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAVSKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 177/377 (46%), Gaps = 49/377 (12%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F WG+  +     G + +  Y+         P+  ++   + +  I+    H+  ++  
Sbjct: 545 IFAWGKNESGELSFGNQKQPFYN--------KPENPKNLDRIYIKQISTSQNHSACISAN 596

Query: 263 GEIFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           GE++  G    G+LG      A+++  Q+I I  G+ V  VACG+YHT A+T +  +Y+W
Sbjct: 597 GELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSW 656

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---- 376
           G GT +  +     K     P  +   L+   +  + CG +H+A +T  G ++T+G    
Sbjct: 657 G-GTLHKKVGQRSGK-----PAPIQ-QLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQ 709

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           D + G LG G       P +++   G +  +VSCG +HT A+              TS  
Sbjct: 710 DYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMAL--------------TSEN 755

Query: 437 KLFTWGDGDKGRLGHGDKEP------------RLFPECVAPLIDENICQVACGHDLSVAL 484
           +LF WG G+ G LG    E              +  E +  L + +I  + CG   ++ L
Sbjct: 756 ELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENI--LFENSIQNIKCGGHHTLLL 813

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T +G++Y+ G    GQLG+  ++     ++   + +  + ++A G  H  AL+  + ++ 
Sbjct: 814 TNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLALSDQNDIFA 873

Query: 545 WGKGANGQLGHGDKDNR 561
            G GA GQLG GD+++R
Sbjct: 874 CGHGARGQLGLGDEESR 890



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 177/395 (44%), Gaps = 46/395 (11%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGE-------IF 266
            LG  +H      S+  D L    ++    L  +NI+      V V  +G+       IF
Sbjct: 487 LLGSYDHEDQLFQSQGDDKLKQSHLKDERNLSPNNISSMKSSNVNVQNEGQGNSIKCYIF 546

Query: 267 SWGEESGGRL--GHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +WG+   G L  G+ ++   + P+  + L  + ++ ++  + H+  ++ +G+LY  G   
Sbjct: 547 AWGKNESGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGSAL 606

Query: 325 YNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +  G LG        I + ++     GI +  ++CG +HT  +T    ++++G      +
Sbjct: 607 H--GKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHKKV 664

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG- 442
           G      +  P  ++ L      +V CG +H+AA+              T  G ++TWG 
Sbjct: 665 GQ----RSGKPAPIQQLNKKGVIQVDCGDYHSAAI--------------TQNGDIYTWGG 706

Query: 443 ---DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
              D +KG+LG G  +    PE +     + I +V+CG   ++ALT+   ++  G+  +G
Sbjct: 707 GGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEFG 766

Query: 500 QLGVPVADGLVPTRV-----------DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           +LG    +   P RV           +  + E+ ++ + CG +H   LT+   +Y+ G G
Sbjct: 767 ELGTSKHE-YTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYG 825

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
             GQLG  + +N+    LV  L  K++ ++  G N
Sbjct: 826 RQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWN 860



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 33/265 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWG----EESGGRLGHGREADVSHPQLI 290
           P  ++      V  + CG  H+  +T+ G+I++WG    + + G+LG G   D+ +P+ +
Sbjct: 671 PAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKL 730

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           +   G  +  V+CG++HT A+T   +L+ WG G +  G LG       + P +V  N + 
Sbjct: 731 KFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEF--GELGTSKHE--YTPIRVKVNFNQ 786

Query: 351 IHLSY-----------ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
            ++ Y           I CG  HT ++T+ G++++ G G  G LG  +  +    + V T
Sbjct: 787 YNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWT 846

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L   +  +++ G  H+ A+    D              +F  G G +G+LG GD+E R  
Sbjct: 847 LTKKKIIKIAAGWNHSLALSDQND--------------IFACGHGARGQLGLGDEESRTI 892

Query: 460 PECVAPLIDENICQVACGHDLSVAL 484
              V  L  +N   ++ G D S A+
Sbjct: 893 FTHVVSLGGKNTATISAGGDHSWAV 917


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 171/343 (49%), Gaps = 30/343 (8%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G  H++L+   G + S G+ S G+LG         P+ I  L  +NV LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           AV   G ++ WG  +   G LG G  K + +IP+K+   L GI +  ++CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 369 AGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 428 SPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHDLSVAL 484
           S SG++     F WG    G+L   G+  P  R  P  +  L    +  ++CG+  +  L
Sbjct: 197 SLSGTS-----FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKV 542
           T  G V+T G  +YGQLG  P A+   P  V  E  E  V ++ CG+ H +A + +T +V
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV--ERIEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 543 YTWGKGAN--GQLGHGDKDNRNSPTLVDF--LKDKQVKRVVCG 581
            ++G+G     +  H   ++ +   LV    L D QVK +  G
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAG 352



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 18/256 (7%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +R  A ET  ++L S     S    H+     G VF WG   + G LG GE +       
Sbjct: 67  ERIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLGIGEFK------- 113

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHP 287
                +PK +++   + +  +ACG  H+V +++ G++FSWG  S G+LG G+E    + P
Sbjct: 114 -ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASP 172

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSG 346
           Q +  L G+ +  VA G +H+ A++ SG  + WG  +     L G+ + V  + P  + G
Sbjct: 173 QRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-G 231

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L  + +  ISCG  HTAV+T  G +FTFGD S+G LGH        P+ VE + GL  +
Sbjct: 232 ALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VS 290

Query: 407 RVSCGVWHTAAVVVAT 422
           ++ CG  HT A +  T
Sbjct: 291 QIDCGSDHTLAYIYTT 306



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 22/265 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ + +   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   + +  P+ I+ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  VACG YH+ A++  G +++W  GT + G LG G +       +   +L+GI L
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSW--GTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  S G L   G+   +    P  +  L+ L    +SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LGH     +  P+ V   I+  
Sbjct: 244 GYKHTAVL--------------TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGL 288

Query: 471 ICQVACGHDLSVA-LTTSGHVYTMG 494
           + Q+ CG D ++A + T+G V + G
Sbjct: 289 VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 26/264 (9%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H+ ++ S G + + GD S G LG         P  +  L  L    VSCG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACG 477
                            G++F WG   +G+LG G+ KE    P+ +  L    I QVACG
Sbjct: 91  CHK--------------GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACG 136

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHV 533
           H  SVAL+  G V++ G+ ++GQLG+       P++   +   S     + +VA G +H 
Sbjct: 137 HYHSVALSEDGQVFSWGTNSHGQLGLGKE---FPSQASPQRVRSLEGIPLAQVAAGGHHS 193

Query: 534 AALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            AL+ +   + WG  + GQL   G+     R  P  +  LK   V  + CG   TA++  
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 591 HKWVSSV-DHSVCSSCHNPFGFRR 613
              V +  D+S     H+P   +R
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKR 277



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +   L V +I+CG +H  ++T+ G++F++G+ S G+LGH   A+   PQL+E + 
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGH----GSKVSCWIPRKVSGNLD 349
           G+ V  + CG  HT A +  +G + ++G G   +    H     S +SC +  K   +L 
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAK---DLA 342

Query: 350 GIHLSYISCGLWHTAV 365
            + + +I  G +   V
Sbjct: 343 DVQVKHIFAGTYANFV 358


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+   G+LG GR  A  S P+++E LSGV +  ++ 
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE H+ A++ SG++Y+WG    + G LG G   +   P  +   LD   + +++CG  HT
Sbjct: 183 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKDSPSCIE-TLDDQKVEFLACGGCHT 239

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T +G +FTFGDG +G LGH    +   PR V  L G R T+++CG  HT A V  T 
Sbjct: 240 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT- 298

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                       GK+F++G G +G+LG+G    +L P
Sbjct: 299 ------------GKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  G  H ++++  G+ F +            +  + H +   IL 
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 120

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  + CG+YH+ A+++ G+L+ WG      G LG G   +     ++  NL G+ L 
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWGQNL--DGQLGVGRIFASTSTPEIVENLSGVPLV 178

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   +   P  +ETL   +   ++CG  H
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCH 238

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+GDG  G+LGH   +  L P  V  L+   + Q+
Sbjct: 239 TALL--------------TKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQI 284

Query: 475 ACGHDLSVA-LTTSGHVYTMGSAAYGQLG 502
           ACG   ++A ++ +G V++ GS   GQLG
Sbjct: 285 ACGRQHTLAYVSDTGKVFSFGSGKEGQLG 313



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 18/208 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+  +    P+ VE+   + +  I+
Sbjct: 131 DYHSLALSKGGELFAWGQNL-DGQLG-----VGRIFASTST---PEIVENLSGVPLVQIS 181

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G   +   P  IE L    VE +ACG  HT  
Sbjct: 182 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTAL 241

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+SG ++T+GDG Y  G LGH S  +   PR V+G L G  ++ I+CG  HT A V+  
Sbjct: 242 LTKSGLVFTFGDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDT 298

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREV 397
           G +F+FG G  G LG+G   +  IPR +
Sbjct: 299 GKVFSFGSGKEGQLGNGGTRNQLIPRPM 326



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    STS P  VE L G+   ++S G  H
Sbjct: 127 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 186

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G    +  P C+  L D+ +  +
Sbjct: 187 SMALSMS--------------GNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFL 232

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT SG V+T G   YGQLG     + L P  V G +    V ++ACG  H 
Sbjct: 233 ACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR-VTQIACGRQHT 291

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S T KV+++G G  GQLG+G   N+  P
Sbjct: 292 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 9/132 (6%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
           +C+  L ++NI Q+ CG   S+AL+  G ++  G    GQLGV     +  +    EI E
Sbjct: 116 QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV---GRIFASTSTPEIVE 170

Query: 521 SF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           +     + +++ G  H  AL+ +  VY+WG+   GQLG G   N++SP+ ++ L D++V+
Sbjct: 171 NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVE 230

Query: 577 RVVCGLNFTAII 588
            + CG   TA++
Sbjct: 231 FLACGGCHTALL 242


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 176/356 (49%), Gaps = 39/356 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  ++ G +H++ + K G + S G+   G+LG  R+ + S  + I  L    +  V+CG 
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLG--RKGNNSRIEQISSLEAQTIVDVSCGT 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ A+   G++Y+WGDG+   G LG G   S  + P++++G L+   +  ISCG +H+ 
Sbjct: 94  NHSVAMCDEGNIYSWGDGS--EGQLGTGKFSSKNFTPKRITGLLNR-KIIQISCGNFHSV 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            +   G +F++G    G LG G   I+ + P+ V++L+G+   +V+ G   T A+ ++  
Sbjct: 151 ALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDENICQVACGHDLS 481
                       G +F WG  + G+LG  +  K+    P  V  L D  +  ++CG + +
Sbjct: 209 ------------GTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHT 256

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTST- 539
             L   G VYT G   YGQLG    +   VP +++    +  V +VACG YH      T 
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ--VSQVACGRYHTLLYVFTC 314

Query: 540 SKVYTWGKGANGQLGHGDKDNRNS----PTLVDF--------LKDKQVKRVVCGLN 583
           +++ ++GKG+  Q G+ +  ++      P+  D         LKD  VK +  G N
Sbjct: 315 NRIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNN 370



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 137/256 (53%), Gaps = 29/256 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG+G + G LG G+      FS +     PK +   +   +  I+CG  H+V + 
Sbjct: 103 GNIYSWGDG-SEGQLGTGK------FSSKN--FTPKRITGLLNRKIIQISCGNFHSVALA 153

Query: 261 KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G +FSWG+   G+LG G +  + + PQL++ L G+ +  V  G   T A++ SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFA 213

Query: 320 WGDGTYNSGLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           WG    N+G LG  + +K   + P  V  +L  + ++YISCG  HTAV+   G ++TFGD
Sbjct: 214 WGRN--NAGQLGFKNDAKKGTFKPYAVD-SLRDLGVAYISCGEEHTAVLNKDGIVYTFGD 270

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
            ++G LG      TS+P+++E     + ++V+CG +HT   V              +C +
Sbjct: 271 DTYGQLGQQSGNQTSVPQKIEE-YSRQVSQVACGRYHTLLYVF-------------TCNR 316

Query: 438 LFTWGDGDKGRLGHGD 453
           + ++G G + + G+ +
Sbjct: 317 IVSFGKGSQRQQGNDE 332



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 23/272 (8%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILS 294
           + + S  A  + +++CG  H+V +  +G I+SWG+ S G+LG G+ +  +  P+ I  L 
Sbjct: 76  EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLL 135

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  ++CG +H+ A+   G +++WG      G LG GS++      ++  +L GI L 
Sbjct: 136 NRKIIQISCGNFHSVALAEDGRVFSWGQN--KCGQLGLGSQIINQATPQLVKSLKGIPLV 193

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGV 412
            ++ G   T  ++ +G +F +G  + G LG  +     T  P  V++LR L    +SCG 
Sbjct: 194 QVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGE 253

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            HTA  V+  D            G ++T+GD   G+LG         P+ +       + 
Sbjct: 254 EHTA--VLNKD------------GIVYTFGDDTYGQLGQQSGNQTSVPQKIEEY-SRQVS 298

Query: 473 QVACG--HDLSVALTTSGHVYTMGSAAYGQLG 502
           QVACG  H L + + T   + + G  +  Q G
Sbjct: 299 QVACGRYHTL-LYVFTCNRIVSFGKGSQRQQG 329



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 25/278 (8%)

Query: 317 LYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +Y WGD  +    +L    +V  +         + +    +S G  H+  +   G L + 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQ--KVSIGEKHSLYLLKDGTLLSC 58

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   +G LG   +   S   ++ +L       VSCG  H+ A+                 
Sbjct: 59  GQNPYGQLGRKGN--NSRIEQISSLEAQTIVDVSCGTNHSVAM--------------CDE 102

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G +++WGDG +G+LG G    + F P+ +  L++  I Q++CG+  SVAL   G V++ G
Sbjct: 103 GNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWG 162

Query: 495 SAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
               GQLG+   + +   P  V        V+ V  G     AL+ +  V+ WG+   GQ
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQ-VTAGGSQTFALSMSGTVFAWGRNNAGQ 221

Query: 553 LGHGDKDNRNS--PTLVDFLKDKQVKRVVCGLNFTAII 588
           LG  +   + +  P  VD L+D  V  + CG   TA++
Sbjct: 222 LGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 27/343 (7%)

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
           F    D+  P+ +     L++   A G RH++L+     ++S G+ S G+LG  RE +  
Sbjct: 3   FHWAADSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE 62

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKV 344
            P+ I+ L  ++++LV+CG+ H+ AV   G ++ WG G+   G LG G  K    +P ++
Sbjct: 63  QPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGS--EGQLGIGEFKEINLMPMRI 120

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGL 403
              L GI +  +SCG +H+  ++  G +F++G  S G LG G   S+   P++V +L G+
Sbjct: 121 K-TLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI 179

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              +V+ G  H+ A+ +   + +S   GS S G+L   G+    ++          P  +
Sbjct: 180 PLAQVAAGGSHSFALSL---TGTSYGWGSNSVGQLALSGENSTVQISK--------PHSI 228

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL-GVPVADGLVPTRVDGEIAESF 522
             L +  +  ++CG++ +  LT  G V+T G  + GQL   P      P  V+G   +  
Sbjct: 229 DALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQ-- 286

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
           V ++ CG+YH  A       Y +  G    LGHG +   N PT
Sbjct: 287 VSKIECGSYHTIA-------YVYTTGQVVSLGHGPRPTSN-PT 321



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 25/306 (8%)

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
           AD   P+ +    G+ +   A GE H+  +  +  +Y+ GD +   G LG   + +   P
Sbjct: 7   ADSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSL--GQLGQKREQNTEQP 64

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETL 400
             +   L  + +  +SCG  H+  V   G +F +G GS G LG G+    ++ P  ++TL
Sbjct: 65  EPIQA-LGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL 123

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLF 459
            G++  +VSCG +H+ A+              +  G++F+WG   +G+LG G     +  
Sbjct: 124 GGIKIIQVSCGHYHSLAL--------------SEDGQVFSWGKNSQGQLGLGMQSSSQAS 169

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVD 515
           P+ V  L    + QVA G   S AL+ +G  Y  GS + GQL +   +  V    P  +D
Sbjct: 170 PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSID 229

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
             +    V  ++CG  H A LT   +V+T+G  ++GQL +  +  R  P LV+ +K  QV
Sbjct: 230 A-LKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKG-QV 287

Query: 576 KRVVCG 581
            ++ CG
Sbjct: 288 SKIECG 293



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 23/280 (8%)

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           PR+++G  DG+ L   + G  H+ ++ S   +++ GD S G LG     +T  P  ++ L
Sbjct: 12  PRRLNGR-DGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQAL 70

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLF 459
             L    VSCG  H+ AV                 G++F WG G +G+LG G+ KE  L 
Sbjct: 71  GTLDIDLVSCGKEHSIAVCHK--------------GRVFAWGAGSEGQLGIGEFKEINLM 116

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV--ADGLVPTRVDGE 517
           P  +  L    I QV+CGH  S+AL+  G V++ G  + GQLG+ +  +    P +V   
Sbjct: 117 PMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTS- 175

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQ 574
           +    + +VA G  H  AL+ T   Y WG  + GQL   G       + P  +D LK+  
Sbjct: 176 LEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLG 235

Query: 575 VKRVVCGLNFTAIICLHKWVSSV-DHSVCSSCHNPFGFRR 613
           V  + CG   TA++     V +  D+S     +NP G RR
Sbjct: 236 VIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRR 275


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++   G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDLGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG+     L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTF--LFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLG---TFLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|403361228|gb|EJY80312.1| hypothetical protein OXYTRI_22298 [Oxytricha trifallax]
          Length = 855

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 175/389 (44%), Gaps = 72/389 (18%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVN----VELVAC 303
           +  G  H +L+ ++GE+FS+GE   G++G G++   +  P  + + SG      ++ ++ 
Sbjct: 91  VEAGLSHTLLLNRRGEVFSFGEGLQGQVGIGQKTIHLQKPTQLYLESGAKECQKIKKISA 150

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLG------------------------HGSKVSCW 339
             +++ A +++G L+ WG GT   G LG                        +G +    
Sbjct: 151 SGFNSAAFSKTGRLWVWG-GT-QRGKLGLSQMIRDQLEPLNVEFEVQNKEKENGIETQLE 208

Query: 340 IPRKVSGNLDGIHLSYI------SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
           +    + N   I+  YI      S G+ H  ++     +F+ G   +G LGHGD    + 
Sbjct: 209 VFLDENKNHKKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHGDERDRTK 268

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG- 452
           P  ++ L G +   + CG+ H+ AV              +  G +++WG G+ GRLG G 
Sbjct: 269 PFMIKELEGKKIVYIQCGMHHSMAV--------------SQDGDVYSWGLGNGGRLGQGY 314

Query: 453 DKEPR-----LFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           + E R     L P+ +    D+N I  V+CG  +S     +G +YT G   + +   P  
Sbjct: 315 NDESRSNPNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGTLYTWGKGEHEK---PKF 371

Query: 507 DGLV------PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           D  +      P   D +I       V+CGA HV AL    +++ WG+G  G LGHGD   
Sbjct: 372 DDFIEYSSPFPMIEDKQIVY-----VSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKK 426

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           R S   + F ++K+   V CG  FT +I 
Sbjct: 427 RLSVCPISFFENKRCIDVACGDKFTVVIA 455



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 26/256 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           K + +    +   ++ G  H +L+ K+  +FS G    GRLGHG E D + P +I+ L G
Sbjct: 218 KKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHGDERDRTKPFMIKELEG 277

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG------SKVSCWIPRKVSGNLD 349
             +  + CG +H+ AV++ GD+Y+WG G  N G LG G      S  +  +P+K+    D
Sbjct: 278 KKIVYIQCGMHHSMAVSQDGDVYSWGLG--NGGRLGQGYNDESRSNPNQLLPKKIEFTFD 335

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
              +  +SCG   + V   AG L+T+G G        D I  S P     +   +   VS
Sbjct: 336 DNQIMNVSCGSTISCVAVKAGTLYTWGKGEHEKPKFDDFIEYSSP--FPMIEDKQIVYVS 393

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  H    V+A D +          G+LF WG G++G LGHGD + RL   C     + 
Sbjct: 394 CGASH----VMALDRN----------GRLFGWGQGNEGCLGHGDCKKRL-SVCPISFFEN 438

Query: 470 NIC-QVACGHDLSVAL 484
             C  VACG   +V +
Sbjct: 439 KRCIDVACGDKFTVVI 454



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 22/222 (9%)

Query: 205 IWGEGIAN-GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
           ++  G A  G LG G+ R         D   P  ++      +  I CG  H++ V++ G
Sbjct: 247 VFSTGFAKYGRLGHGDER---------DRTKPFMIKELEGKKIVYIQCGMHHSMAVSQDG 297

Query: 264 EIFSWGEESGGRLGHGREADVSH------PQLIEILSGVN-VELVACGEYHTCAVTRSGD 316
           +++SWG  +GGRLG G   +         P+ IE     N +  V+CG   +C   ++G 
Sbjct: 298 DVYSWGLGNGGRLGQGYNDESRSNPNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGT 357

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           LYTWG G +         + S   P      ++   + Y+SCG  H   +   G LF +G
Sbjct: 358 LYTWGKGEHEKPKFDDFIEYSSPFPM-----IEDKQIVYVSCGASHVMALDRNGRLFGWG 412

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            G+ G LGHGD         +      R   V+CG   T  +
Sbjct: 413 QGNEGCLGHGDCKKRLSVCPISFFENKRCIDVACGDKFTVVI 454


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 161/301 (53%), Gaps = 30/301 (9%)

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILS--GVNVELVACG---EYHTCAVTRSGDL 317
           G + + G+ S G+LG G   D S  Q +  L+    N++ ++     + HT A+T++G +
Sbjct: 387 GSLHACGKGSHGKLGLG---DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVV 443

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y+WGDG +  G LGHG+  +  +P+ + G      +++IS G  H+A +T  G L+T+G+
Sbjct: 444 YSWGDGEF--GKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGE 501

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G  G LGHGD     +P  V ++     ++V+ G  HT  VV++ D  +           
Sbjct: 502 GEHGRLGHGDSSIQRVPTLVRSIDA--ASQVAAGCSHT--VVLSKDEMT----------- 546

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           ++T+G GD G+LGHG+ +   +P+ V  L    I ++A G   S+ALT +G +Y  G   
Sbjct: 547 VWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGP 606

Query: 498 YGQLGVPVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              LGV  AD   L+P  V+  + +  + +++ G  H  AL++  +VY+WG    GQ G 
Sbjct: 607 C--LGVGAADAVHLLPKIVES-LRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGL 663

Query: 556 G 556
           G
Sbjct: 664 G 664



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 162/366 (44%), Gaps = 40/366 (10%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E ++WG  S  +L  G +  +  P+  +      ++L A G+Y T A+   G L+  G G
Sbjct: 338 EAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNA-IQLEA-GQYCTFALFDDGSLHACGKG 395

Query: 324 TYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           ++    LG  S   C     + + N+D I  S  S    HT  +T  G ++++GDG FG 
Sbjct: 396 SHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDS--HTLALTKNGVVYSWGDGEFGK 453

Query: 383 LGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LGHG+  +  +P+ +    +    T +S G  H+AA+              T  G L+TW
Sbjct: 454 LGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAI--------------TKDGDLYTW 499

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH-VYTMGSAAYGQ 500
           G+G+ GRLGHGD   +  P  V  +  +   QVA G   +V L+     V+T G+   G+
Sbjct: 500 GEGEHGRLGHGDSSIQRVPTLVRSI--DAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGK 557

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           LG          ++   +    ++++A G     ALT T  +Y WG G    +G  D  +
Sbjct: 558 LGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVH 617

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYN 620
              P +V+ L+D  +  +  G       C H    S DH V S  +N  G          
Sbjct: 618 L-LPKIVESLRDVHIVDISLG------DC-HCLALSADHEVYSWGNNNMG---------Q 660

Query: 621 CGLVFC 626
           CGL  C
Sbjct: 661 CGLGHC 666



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 19/182 (10%)

Query: 186 SSSSHGSAHEDFDSLGDVFIWGEGIA-NGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           S  + G +H    S  ++ +W  G   NG LG G  ++ Y          PK V++   +
Sbjct: 528 SQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEY---------YPKIVDALKGI 578

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVA 302
            +  IA G + ++ +T  G I+ WG   G  LG G  AD  H  P+++E L  V++  ++
Sbjct: 579 RIKKIAAGTQCSIALTWTGFIYVWG--CGPCLGVG-AADAVHLLPKIVESLRDVHIVDIS 635

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLW 361
            G+ H  A++   ++Y+WG+       LGH  + VS  +P KV   LDGI +  IS G  
Sbjct: 636 LGDCHCLALSADHEVYSWGNNNMGQCGLGHCFTPVS--LPTKVLA-LDGIKIEQISTGTS 692

Query: 362 HT 363
           H+
Sbjct: 693 HS 694


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GNPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I   +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGNPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGNPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V       V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GNPVSWISCGYYHSAFV 205



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++ + VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGNPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 174/331 (52%), Gaps = 27/331 (8%)

Query: 226 FSRQTDALLPKAVES-TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           FS    +  P+ +++ T  +++   A G  H++L+     ++S G+ S G+LG  R+   
Sbjct: 3   FSWAAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQST 62

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRK 343
             P+ I+ L+ ++V+LV+CG+ H+ AV   G ++ WG G+   G LG G  K   ++P K
Sbjct: 63  ERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGS--EGQLGIGEFKEISFMPTK 120

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRG 402
           +   L GI +  +SCG +H+  ++  GH+F++G  S G LG G +  S +IP++V++L G
Sbjct: 121 IKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEG 179

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL---GHGDKEPRLF 459
           +   +V+ G  H+ A+ +               G  F WG    G+L   G+  KE    
Sbjct: 180 IPLAQVAAGGTHSFALSLT--------------GTSFGWGSNRSGQLALSGNKVKEQIYK 225

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEI 518
           P  +  L + ++  ++CG++ +  LT  G V+T G  + GQL   P +    P  ++G  
Sbjct: 226 PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIG 285

Query: 519 AESFVEEVACGAYH-VAALTSTSKVYTWGKG 548
               V ++ C +YH +A + +T +V + G+G
Sbjct: 286 GR--VSQIECASYHTIAYVYTTGQVVSLGRG 314



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 23/292 (7%)

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           SG+ +   A GE+H+  +  +  +Y+ GD ++  G LG     S   P  +   L+ +H+
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSW--GQLGQRRDQSTERPEPIQA-LNDLHV 76

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGV 412
             +SCG  H+  V   G +F +G GS G LG G+    S +P +++ L G++  +VSCG 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENI 471
           +H+ A+              +  G +F+WG   +G+LG G +   +  P+ V  L    +
Sbjct: 137 YHSLAL--------------SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQL---GVPVADGLVPTRVDGEIAESFVEEVAC 528
            QVA G   S AL+ +G  +  GS   GQL   G  V + +      G +    V  ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
           G  H A LT   +V+T+G  ++GQL    +  +  P L++ +  + V ++ C
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIEC 293



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 21/254 (8%)

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           PR++     GI L   + G  H+ ++ S   +++ GD S+G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLF 459
             L    VSCG  H+ AV                 GK+F WG G +G+LG G+ KE    
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHK--------------GKVFAWGAGSEGQLGIGEFKEISFM 117

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGE 517
           P  +  L    I QV+CGH  S+AL+  GHV++ G  + GQLG+        +P +V   
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-S 176

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQ 574
           +    + +VA G  H  AL+ T   + WG   +GQL   G+  K+    P  +  LK+  
Sbjct: 177 LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS 236

Query: 575 VKRVVCGLNFTAII 588
           V  + CG   TA++
Sbjct: 237 VIYISCGYEHTAVL 250


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 161/331 (48%), Gaps = 34/331 (10%)

Query: 238 VESTM-ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS-- 294
           VEST   L +  IACG  H+V++   G +FS G     +LGH  +     P L E L   
Sbjct: 45  VESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH--DGIKRKPNLYENLHWY 102

Query: 295 --------GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVS 345
                   G++V  VACG+ H  A+T  G L++WG   Y   G+           PR   
Sbjct: 103 IDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQE 162

Query: 346 GNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            NL  I    I+CG  H+ A+ ++ G L  +G    G LG G   S   P  V  L G+ 
Sbjct: 163 INLANI--VQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIP 220

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
             +++ G  H+  +         +PSG+     +F WG    G++G  ++   L+P  V 
Sbjct: 221 ICQLAAGASHSLVL---------TPSGT-----VFGWGKNMFGQIGQNEQRDILYPSLVK 266

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFV 523
            L  + + ++ACG D SVA+T +G ++T G+  YGQLG    +  L P +V  E+  S V
Sbjct: 267 LLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQV-MELMGSVV 325

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
            +VACG  H  A+T  +K+Y +G   +GQLG
Sbjct: 326 LDVACGRCHTLAITE-NKLYAFGLNTSGQLG 355



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 39/342 (11%)

Query: 258 LVTKQGEIFSWGEESGGRLGHG--READVSHPQLIE-ILSGVNVELVACGEYHTCAVTRS 314
           L+ K   +   G  S G+LG G   E +V    L+E   + + +  +ACG +H+  +   
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRK------------VSGNLDGIHLSYISCGLWH 362
           G +++ G+  +    LGH       I RK            V  +  GIH+  ++CG  H
Sbjct: 71  GSVFSCGNNDFYQ--LGHDG-----IKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAH 123

Query: 363 TAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
              +T+ GHLF++G   +G LG    + ++ +    ++ +      +++CG  H+ A+  
Sbjct: 124 CVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL-- 181

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       ++ G L  WG  D G+LG G +E  + P  V  L+   ICQ+A G   
Sbjct: 182 -----------ESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASH 230

Query: 481 SVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           S+ LT SG V+  G   +GQ+G     D L P+ V     +  +  +ACG     A+T+T
Sbjct: 231 SLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIR-LACGEDFSVAVTAT 289

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             ++T+G G  GQLGHG++++   P  V  L    V  V CG
Sbjct: 290 GGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACG 331



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V   M + +  +A GA H++++T  G +F WG+   G++G   + D+ +P L+++L 
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLR 269

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V  +ACGE  + AVT +G L+T+G GTY  G LGHG++ S   P++V   +  + L 
Sbjct: 270 TQKVIRLACGEDFSVAVTATGGLFTFGAGTY--GQLGHGNQNSELFPKQVMELMGSVVLD 327

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPRE 396
            ++CG  HT  +T    L+ FG  + G LG     H   I   IP E
Sbjct: 328 -VACGRCHTLAITE-NKLYAFGLNTSGQLGLLNVKHTTSIPLPIPIE 372



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 120/249 (48%), Gaps = 35/249 (14%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR----------GLRT 405
           I+CG  H+ ++   G +F+ G+  F  LGH D I    P   E L           G+  
Sbjct: 57  IACGRHHSVMLLDDGSVFSCGNNDFYQLGH-DGIKRK-PNLYENLHWYIDVKQSFVGIHV 114

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+CG  H  A+              T+ G LF+WG    G+LG   +   +  +   P
Sbjct: 115 ISVACGDAHCVAL--------------TNDGHLFSWGSNVYGQLG--VERMNVVAKARYP 158

Query: 466 LIDE----NICQVACGHDLSVAL-TTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIA 519
            I E    NI Q+ACG + S+AL +T G ++  G   +GQLG+   +  + PT V+  + 
Sbjct: 159 RIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMG 218

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + ++A GA H   LT +  V+ WGK   GQ+G  ++ +   P+LV  L+ ++V R+ 
Sbjct: 219 IP-ICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLA 277

Query: 580 CGLNFTAII 588
           CG +F+  +
Sbjct: 278 CGEDFSVAV 286



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 27/251 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV-LV 259
           G +F WG  +  G LG     V         A  P+  E  +A ++  IACG+ H++ L 
Sbjct: 131 GHLFSWGSNVY-GQLGVERMNV------VAKARYPRIQEINLA-NIVQIACGSNHSLALE 182

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           +  G + +WG    G+LG G       P  +  L G+ +  +A G  H+  +T SG ++ 
Sbjct: 183 STDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFG 242

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG   +  G +G   +     P  V   L    +  ++CG   +  VT+ G LFTFG G+
Sbjct: 243 WGKNMF--GQIGQNEQRDILYPSLVKL-LRTQKVIRLACGEDFSVAVTATGGLFTFGAGT 299

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LGHG+  S   P++V  L G     V+CG  HT A+               +  KL+
Sbjct: 300 YGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAI---------------TENKLY 344

Query: 440 TWGDGDKGRLG 450
            +G    G+LG
Sbjct: 345 AFGLNTSGQLG 355


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG      G LG G   S   P  + G LD   + +++CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKN--ECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 29/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   S   P  +E L   +   V+CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G       P LIE L    VE VACG  H+  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      +P  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  V
Sbjct: 203 SMALSMS--------------GNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFV 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+    V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 42/232 (18%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL 153

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----Q 473
                         +  G+LF WG    G+LG G K    FP    P I E++      Q
Sbjct: 154 --------------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQ 195

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACG 529
           ++ G   S+AL+ SG++Y+ G    GQLG+    G   ++ D  + E      VE VACG
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGL----GHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             H A LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG      G LG G   S   P  + G LD   + +++CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKN--ECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 29/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   S   P  +E L   +   V+CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G       P LIE L    VE VACG  H+  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      +P  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  V
Sbjct: 203 SMALSMS--------------GNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFV 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+    V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 42/232 (18%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL 153

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----Q 473
                         +  G+LF WG    G+LG G K    FP    P I E++      Q
Sbjct: 154 --------------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQ 195

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACG 529
           ++ G   S+AL+ SG++Y+ G    GQLG+    G   ++ D  + E      VE VACG
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGL----GHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             H A LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG      G LG G   S   P  + G LD   + +++CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKN--ECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 29/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   S   P  +E L   +   V+CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G       P LIE L    VE VACG  H+  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      +P  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  V
Sbjct: 203 SMALSMS--------------GNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFV 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+    V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 42/232 (18%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL 153

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----Q 473
                         +  G+LF WG    G+LG G K    FP    P I E++      Q
Sbjct: 154 --------------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQ 195

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACG 529
           ++ G   S+AL+ SG++Y+ G    GQLG+    G   ++ D  + E      VE VACG
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGL----GHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             H A LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG      G LG G   S   P  + G LD   + +++CG  H+A
Sbjct: 200 EAHSTALSMSGNIYSWGKN--ECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 29/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   S   P  +E L   +   V+CG  H
Sbjct: 195 QISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H+  ++  G I+SWG+   G+LG G       P LIE L    VE VACG  H+  
Sbjct: 198 AGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      +P  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  V
Sbjct: 203 STALSMS--------------GNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFV 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+    V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 42/232 (18%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+
Sbjct: 105 GAEHMLILSSDGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL 153

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----Q 473
                         +  G+LF WG    G+LG G K    FP    P I E++      Q
Sbjct: 154 --------------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQ 195

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACG 529
           ++ G   S AL+ SG++Y+ G    GQLG+    G   ++ D  + E      VE VACG
Sbjct: 196 ISAGEAHSTALSMSGNIYSWGKNECGQLGL----GHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             H A LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG
Sbjct: 192 PLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
          Length = 1128

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 183/402 (45%), Gaps = 43/402 (10%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           + F WG     G LG G+        R+    LPK++  +  + +  ++CG+ H   ++K
Sbjct: 7   EFFSWGNDEM-GQLGHGQE----GPDRKKIFNLPKSL--SFEVLIQQVSCGSAHTSFISK 59

Query: 262 QGEIFSWGEESGGRLGHGREADV--SHPQLIEILSGV--NVELVACGEYHTCAVTRSGDL 317
           QG +FS+G  S G+LG    A    S P LI  L  +  N   ++CG +HT  +T  GD+
Sbjct: 60  QGYVFSFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTSVGDV 119

Query: 318 YTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           Y WG      G  G     + ++  P K+  +        + CG  HTAVV+S G L+TF
Sbjct: 120 YIWGRNL--QGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTF 177

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           GD S G LG G     ++ R    + G+   T +VSCG  HT  +              T
Sbjct: 178 GDNSEGQLGIGVEFKNTVDRAA-LVTGISEETIQVSCGYKHTLVL--------------T 222

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           + G +F  G   +  L  G  +    P  +   ID    +       SVA+T+   +   
Sbjct: 223 NHGTVFGMGTNKRYELASGTLQKSSQPIRIQT-IDMFAVEKIIAGGFSVAITSQNELLVW 281

Query: 494 GSAAYGQLGVPVADGLVPTR-VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           GS  +G    P    +   R VD  +++S+    + GA    A+     VYTWG+   GQ
Sbjct: 282 GSGDFGVFQSPQKIFMEDVRFVDVSLSKSYD---SFGA----AIDDQGFVYTWGQNQFGQ 334

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
           LG GD   R  PT +  L+ K+V+++V G +F  I+ L K +
Sbjct: 335 LGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSF--IVALGKDI 374



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 36/289 (12%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAV 257
           S+GDV+IWG  +        + + G S +       P  + +  A      + CG +H  
Sbjct: 115 SVGDVYIWGRNL--------QGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTA 166

Query: 258 LVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
           +V+  GE++++G+ S G+LG G E    V    L+  +S   ++ V+CG  HT  +T  G
Sbjct: 167 VVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAALVTGISEETIQ-VSCGYKHTLVLTNHG 225

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            ++  G GT     L  G+      P ++   +D   +  I  G +  A +TS   L  +
Sbjct: 226 TVF--GMGTNKRYELASGTLQKSSQPIRIQ-TIDMFAVEKIIAGGFSVA-ITSQNELLVW 281

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G G FG            P+++  +  +R   VS    + +      D            
Sbjct: 282 GSGDFGVF--------QSPQKI-FMEDVRFVDVSLSKSYDSFGAAIDDQ----------- 321

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
           G ++TWG    G+LG GD   R  P  +  L  + + Q+  G    VAL
Sbjct: 322 GFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSFIVAL 370


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 136/254 (53%), Gaps = 24/254 (9%)

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC---WIPRKVSG-NLDGIHLSY 355
            ++ACG+ H  A+  +GD+YTWG    + G LG G  +S      P +V   ++ GIH+  
Sbjct: 776  VLACGQDHA-AIVANGDVYTWGRA--HEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRA 832

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            ++CG  HT  VT  G L+++G  S+G LG GD    S P  VE L G R   V+CG  HT
Sbjct: 833  VACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHT 892

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
              +V+  D             +L+++G G  G+LGHGD E ++ P+ V  L    I  ++
Sbjct: 893  --LVLTQDQ------------RLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGIS 938

Query: 476  CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
             G+  S ALT  G V+  GS+++GQLG   +    VP R+   ++   V  + CG Y   
Sbjct: 939  AGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKA-LSSHHVSILTCGYYSNI 997

Query: 535  ALTST-SKVYTWGK 547
            A+TS   KVYTWGK
Sbjct: 998  AITSNPQKVYTWGK 1011



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 174/376 (46%), Gaps = 55/376 (14%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---SHPQLIEIL--SGVNVELVAC 303
            +ACG  HA +V   G++++WG    GRLG G    +   + P  +E L   G++V  VAC
Sbjct: 777  LACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835

Query: 304  GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            G+ HT AVT+ G LY+WG  +Y  G LG G +     P  V   L G     ++CG  HT
Sbjct: 836  GKEHTMAVTQEGKLYSWGSSSY--GQLGVGDRNVHSRPVAVEA-LSGQRCLSVACGQLHT 892

Query: 364  AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             V+T    L++FG G  G LGHGD     +P+ V  L       +S G  H+ A+     
Sbjct: 893  LVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGAL----- 947

Query: 424  SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                     T+ G+++ +G    G+LG G       P  +  L   ++  + CG+  ++A
Sbjct: 948  ---------TNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIA 998

Query: 484  LTTSGH-VYTMGSAAYG-----QLG------------------------VPVADG-LVPT 512
            +T++   VYT G +        QL                         +P+ +  L+P+
Sbjct: 999  ITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPS 1058

Query: 513  RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
             V   I ++ ++++     H   LT+   +Y+WG    GQLG G++ +++ P L++  +D
Sbjct: 1059 LVPTNI-QAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRD 1117

Query: 573  KQVKRVVCGLNFTAII 588
             Q   V  G  F+  +
Sbjct: 1118 DQFVAVAAGSRFSLAV 1133



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 149/345 (43%), Gaps = 56/345 (16%)

Query: 191  GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM---ALDVH 247
            G  H    + GDV+ WG           E R+G       D   P     T+    + V 
Sbjct: 780  GQDHAAIVANGDVYTWGRA--------HEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVR 831

Query: 248  NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
             +ACG  H + VT++G+++SWG  S G+LG G     S P  +E LSG     VACG+ H
Sbjct: 832  AVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLH 891

Query: 308  TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            T  +T+   L+++G G +  G LGHG      +P+ V+  L    +  IS G  H+  +T
Sbjct: 892  TLVLTQDQRLWSFGWGVH--GQLGHGDVEDQILPKLVN-QLSKCAIVGISAGYAHSGALT 948

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            + G ++ FG  SFG LG G    +++P  ++ L     + ++CG +   A+       +S
Sbjct: 949  NDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAI-------TS 1001

Query: 428  SPSGSTSCGKLFTWGDG---------------DKGRLGHGD--------------KEPRL 458
            +P       K++TWG                    R  + D              +   L
Sbjct: 1002 NPQ------KVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHL 1055

Query: 459  FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
             P  V   I   I ++    +  + LTT G +Y+ GS   GQLG+
Sbjct: 1056 LPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGM 1100



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 37/87 (42%)

Query: 225  SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
            S   +   LLP  V + +   +  +     H +++T  G+++SWG    G+LG G     
Sbjct: 1047 SLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQ 1106

Query: 285  SHPQLIEILSGVNVELVACGEYHTCAV 311
            S P LI          VA G   + AV
Sbjct: 1107 SVPVLINRSRDDQFVAVAAGSRFSLAV 1133


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 128/250 (51%), Gaps = 24/250 (9%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H + VT QGE++SWG  S  +LG  R+   + P  I  L G  V  V  G +H+ AV+++
Sbjct: 96  HVLAVTLQGEVYSWGSNSYKQLG--RDGVNNRPMKITALEGEEVVQVCAGGHHSAAVSKA 153

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL--WHTAVVTSAGHL 372
           G+LYTWG G Y  G LGHG+     +P +V+   +GI + +++CGL   H+  VT  GH+
Sbjct: 154 GNLYTWGRGGY--GRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHI 211

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           ++FGDG FG LGHG +     P  ++        +V CG   +AA+ ++           
Sbjct: 212 YSFGDGDFGKLGHGTNDRRRQPERID----FDIVKVVCGSSTSAAISLS----------- 256

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
              G L+ WG G + RLG G +     P     L    +   A   +  VA+T  G V+ 
Sbjct: 257 ---GALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFV 313

Query: 493 MGSAAYGQLG 502
            G+  +GQLG
Sbjct: 314 WGANDHGQLG 323



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 42/350 (12%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGR------LGHGREADVSHPQLIEILSGVN 297
           L+  +IA G R   ++  +G ++S G  +  +      LGH   +       + ++ G+ 
Sbjct: 32  LNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQNDVKSFLGHAESS-------LALVEGLE 84

Query: 298 VE--LVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            E  +      H  AVT  G++Y+WG  +Y   G  G  ++     P K++  L+G  + 
Sbjct: 85  SERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR-----PMKITA-LEGEEVV 138

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVW 413
            +  G  H+A V+ AG+L+T+G G +G LGHG     ++P  V     G+R   V+CG+ 
Sbjct: 139 QVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLG 198

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
              ++ V  D            G ++++GDGD G+LGHG  + R  PE     ID +I +
Sbjct: 199 DAHSMCVTED------------GHIYSFGDGDFGKLGHGTNDRRRQPE----RIDFDIVK 242

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           V CG   S A++ SG +Y  G     +LG      +   R    +    V + A  + H 
Sbjct: 243 VVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHG 302

Query: 534 AALTSTSKVYTWGKGANGQLG--HGDKDNRNSPTLVDFLKD-KQVKRVVC 580
            A+T   +V+ WG   +GQLG   G +    +P ++    +   V RV C
Sbjct: 303 VAVTDRGEVFVWGANDHGQLGADAGSEKTIIAPRVIKLPGEFPAVNRVHC 352



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 24/219 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  + +    +V  +  G  H+  V+K G +++WG    GRLGHG   DV+ P  +    
Sbjct: 126 PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFP 185

Query: 294 SGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            G+ V  VAC  G+ H+  VT  G +Y++GDG +  G LGHG+      P ++       
Sbjct: 186 EGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDF--GKLGHGTNDRRRQPERID-----F 238

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +  + CG   +A ++ +G L+ +G G    LG G       PR    L   +    +  
Sbjct: 239 DIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALS 298

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
             H  AV              T  G++F WG  D G+LG
Sbjct: 299 SEHGVAV--------------TDRGEVFVWGANDHGQLG 323



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 85/170 (50%), Gaps = 9/170 (5%)

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
           S++S     T  G++++WG     +LG      R  P  +  L  E + QV  G   S A
Sbjct: 92  SATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR--PMKITALEGEEVVQVCAGGHHSAA 149

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGA--YHVAALTSTS 540
           ++ +G++YT G   YG+LG   +D + VPTRV        V  VACG    H   +T   
Sbjct: 150 VSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDG 209

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            +Y++G G  G+LGHG  D R  P  +DF     + +VVCG + +A I L
Sbjct: 210 HIYSFGDGDFGKLGHGTNDRRRQPERIDF----DIVKVVCGSSTSAAISL 255



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV-ACGHDLSVALTTSGHVYT 492
           SCG      +  K  LGH +    L    V  L  E   QV A  H L+V L   G VY+
Sbjct: 55  SCGSHTRPQNDVKSFLGHAESSLAL----VEGLESERFIQVSATSHVLAVTL--QGEVYS 108

Query: 493 MGSAAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
            GS +Y QLG    DG+   P ++     E  V+ V  G +H AA++    +YTWG+G  
Sbjct: 109 WGSNSYKQLG---RDGVNNRPMKITALEGEEVVQ-VCAGGHHSAAVSKAGNLYTWGRGGY 164

Query: 551 GQLGHGDKDNRNSPTLV-DFLKDKQVKRVVCGLNFTAIICL 590
           G+LGHG  D+ N PT V  F +  +V  V CGL     +C+
Sbjct: 165 GRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCV 205


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 167/338 (49%), Gaps = 25/338 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IACG  H  L+TK G +F +G  + G+LG G +  V+ P  ++ L    V LVACG  HT
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +++ G  +     LG   + + +       +L  + +  ++ G   +A +T 
Sbjct: 101 LICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKM--LAAGSNTSAALTE 158

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G LF +GD + G +G         P+EV+   G   + VSCG +H+A V          
Sbjct: 159 SGKLFMWGDNTEGQIGLAKESHAPSPQEVDV--GGPISWVSCGYYHSAFV---------- 206

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKE-PRLFPECVAPLIDENICQVACGHDLSVALTTS 487
               T+ G L+T+G+ D G+LG   ++ PR     +   I E + QVACG   +VALT  
Sbjct: 207 ----TADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTEE 262

Query: 488 GHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
             ++T G   +GQL  G  + +  +P  V+    +  V +VACG  H A +T    +YT+
Sbjct: 263 -RLFTFGLGQFGQLGHGTFIFESRLPRPVE-HFKKGRVCQVACGENHTAVITDGGLLYTF 320

Query: 546 GKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           G G +G+LG G+++  N+  PT+        V+   CG
Sbjct: 321 GDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCG 358



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 155/314 (49%), Gaps = 39/314 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V  +ACG  H ++ T QG++FS G  S G+LG G   + +  Q I    
Sbjct: 79  PTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFD 138

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            +  V+++A G   + A+T SG L+ WGD T   G +G   +     P++V     G  +
Sbjct: 139 SLGPVKMLAAGSNTSAALTESGKLFMWGDNT--EGQIGLAKESHAPSPQEVD---VGGPI 193

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETLRGLRTTR 407
           S++SCG +H+A VT+ G L+TFG+   G LG    ++T       +P+ V++++    T+
Sbjct: 194 SWVSCGYYHSAFVTADGALYTFGECDSGKLG----LTTEQLPRHRVPQMVKSIK-EPVTQ 248

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAP 465
           V+CG  HT A+                  +LFT+G G  G+LGHG    E RL P  V  
Sbjct: 249 VACGGGHTVALTEE---------------RLFTFGLGQFGQLGHGTFIFESRL-PRPVEH 292

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESF 522
                +CQVACG + +  +T  G +YT G   +G+LG+      +   PT V     +  
Sbjct: 293 FKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPT-VCSRFLKYG 351

Query: 523 VEEVACGAYHVAAL 536
           V+   CG  H+  L
Sbjct: 352 VQAATCGGCHMVVL 365



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +ACG+ HT  +T++G L+ +G  + N G LG GSK +   P  V   L    +  ++CG 
Sbjct: 41  IACGDEHTALITKNGRLFMFG--SNNWGQLGLGSKRTVNKPTCVKA-LKTEKVLLVACGR 97

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T+ G +F+ G  S G LG GD                RTT      + +   V 
Sbjct: 98  NHTLICTAQGKVFSSGGNSEGQLGLGDCEE-------------RTTFQRIHAFDSLGPVK 144

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  GKLF WGD  +G++G   +     P+ V   +   I  V+CG+  
Sbjct: 145 MLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD--VGGPISWVSCGYYH 202

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF---VEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+      +P     ++ +S    V +VACG  H  ALT
Sbjct: 203 SAFVTADGALYTFGECDSGKLGLTTEQ--LPRHRVPQMVKSIKEPVTQVACGGGHTVALT 260

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
              +++T+G G  GQLGHG     +  P  V+  K  +V +V CG N TA+I
Sbjct: 261 E-ERLFTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVI 311



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           ++ACG  H A +T   +++ +G    GQLG G K   N PT V  LK ++V  V CG N 
Sbjct: 40  KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNH 99

Query: 585 TAIIC 589
           T +IC
Sbjct: 100 T-LIC 103



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAY 531
           ++ACG + +  +T +G ++  GS  +GQLG+     +  PT V     E  V  VACG  
Sbjct: 40  KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEK-VLLVACGRN 98

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD-FLKDKQVKRVVCGLNFTAII 588
           H    T+  KV++ G  + GQLG GD + R +   +  F     VK +  G N +A +
Sbjct: 99  HTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAAL 156



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 6/95 (6%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQ 288
           ++ LP+ VE      V  +ACG  H  ++T  G ++++G+   G+LG G E   +   P 
Sbjct: 283 ESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +        V+   CG  H   + R  D    GDG
Sbjct: 343 VCSRFLKYGVQAATCGGCHMVVLARPRD----GDG 373


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 163/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ V+ P  ++ L    V+  ACG  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y    G  N G LG G          +S       +  +S G   +A +T 
Sbjct: 110 LVSTEGGKVY--ASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTE 167

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 168 DGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 215

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF------PECVAPLIDENICQVACGHDLSV 482
               T+ G+L+T+G+ + G+LG     P+        P+ V P I E + QVACG   +V
Sbjct: 216 ----TTEGELYTFGEPESGKLGL----PKQLLVNHRMPQSV-PGIPEKVVQVACGGGHTV 266

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSK 541
            LT    VYT G   +GQLG+       P  +V   I +  +  + CG  H A +T    
Sbjct: 267 VLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGL 325

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+ +PTL        V+ V CG
Sbjct: 326 MYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + + +CG
Sbjct: 49  FLSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKSTVNKPTCVKA-LKPEKVKFAACG 105

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR-VSCGVWHTAAV 418
             HT V T  G ++  G  + G LG GD    +    +      R  + +S G   +AA+
Sbjct: 106 RNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAAL 165

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+
Sbjct: 166 --------------TEDGELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWISCGY 209

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +TT G +YT G    G+LG+P   + +  +P  V G I E  V+ VACG  H   
Sbjct: 210 YHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVV 267

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           LT  + VYT+G G  GQLG G        P +++ +KD ++  + CG N TA+I
Sbjct: 268 LTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 320



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + +   LI    
Sbjct: 88  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFT 147

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 148 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLKNITNVCVPQQVTV---GKPI 202

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG      ++  +P+ V  +   +  +V+CG
Sbjct: 203 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPE-KVVQVACG 261

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 262 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETPVPKVIEHIK 303

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D  I  + CG + +  +T  G +YT G   +G+LG+ +    +   PT          V+
Sbjct: 304 DLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSN-FLRFIVQ 362

Query: 525 EVACGAYHVAALTS 538
            VACG  H     +
Sbjct: 363 LVACGGCHTLVFAT 376



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 169 GELFMWGDN--------SEGQIG--LKNITNVCVPQQV--TVGKPISWISCGYYHSAFVT 216

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG  ++  V+H ++ + + G+   V  VACG  HT  +T    +Y
Sbjct: 217 TEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTEKA-VY 274

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  ++  + +S I CG  HTA++T  G ++TFGDG
Sbjct: 275 TFGLGQF--GQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDG 332

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             V+CG  HT  +V AT
Sbjct: 333 RHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHT--LVFAT 376


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 183/402 (45%), Gaps = 79/402 (19%)

Query: 262 QGEIFSWGEESGGRLGHG-------REA-DVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           Q  +++WG  + G+LGHG       R A +   P+L E L G  +  V  G  H+ A+  
Sbjct: 68  QSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDE 127

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G LY WG   Y+   LG  S++   +PR+V   L GI +  +SCG + TA V   G ++
Sbjct: 128 EGKLYVWGSNEYSKLGLGESSEMET-LPREVEA-LKGIKIVDVSCGDYFTAAVDEDGKMY 185

Query: 374 TFGDGS-----FGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATDSSS 426
           ++G G       G LGH        PR + TL  +G+    V CG +HT A+        
Sbjct: 186 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVAL-------- 237

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 T  G+++ WG+G+ GRLG+G+ +    PE +     +N+  +A G D S ALT 
Sbjct: 238 ------TKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD 291

Query: 487 SGHVYTMGSAAYGQLGV--------------PVA----DGLVPTRV------------DG 516
            G +Y+ G  +  QLG+              PV     +GL+  ++            DG
Sbjct: 292 KGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDG 351

Query: 517 EI----AESFVE-------------EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
            +    A+ ++E             +VACG  +   LT   KV+T+GKG++  LGHGD+ 
Sbjct: 352 RLYMWGAKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRK 411

Query: 560 NRNSPTLVDFLKDKQVKRVVCG-LNFTAIICLHKWVSSVDHS 600
           N+  P  +  L    +  V CG  +  AI   H   +  D S
Sbjct: 412 NQLQPVKIQALAGVNITSVSCGDYHMGAIATPHAEAADRDFS 453



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 175/373 (46%), Gaps = 55/373 (14%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +++ V   +SH +A    D  G +++WG   +N +      ++G   S + + L P+ VE
Sbjct: 111 AITHVEFGASHSAA---IDEEGKLYVWG---SNEY-----SKLGLGESSEMETL-PREVE 158

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWG-----EESGGRLGHGREADVSHPQLIEIL- 293
           +   + + +++CG      V + G+++SWG      +  G LGH    D   P+L+  L 
Sbjct: 159 ALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLV 218

Query: 294 -SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             GV +  V CGE+HT A+T+ G+++ WG+G Y  G LG+G   +C +P  +       +
Sbjct: 219 DQGVPIATVECGEFHTVALTKDGEIWAWGNGEY--GRLGNGESDTCEVPEPIE-FFSKDN 275

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST------SIPREVETLRGLRTT 406
           +  I+ G   +  +T  G L+++G  S   LG G  ++       SIP  VE   GL   
Sbjct: 276 VVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVK 335

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++ G  H AAV              T  G+L+ WG            +  + P  +  +
Sbjct: 336 QIAAGYDHAAAV--------------TEDGRLYMWG-----------AKIWIEPHEMTAV 370

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEE 525
            +  + QVACG   +V LT  G V+T G  +   LG     + L P ++   +A   +  
Sbjct: 371 NEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQA-LAGVNITS 429

Query: 526 VACGAYHVAALTS 538
           V+CG YH+ A+ +
Sbjct: 430 VSCGDYHMGAIAT 442



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 106/254 (41%), Gaps = 40/254 (15%)

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSI--------PREVETLRGLRTTRVSCGVWH 414
           TA   +   ++T+G+G+ G LGHG  I + I        P+  E L G   T V  G  H
Sbjct: 62  TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-EPRLFPECVAPLIDENICQ 473
           +AA+                 GKL+ WG  +  +LG G+  E    P  V  L    I  
Sbjct: 122 SAAI--------------DEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVD 167

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG----------LVPTRVDGEIAESFV 523
           V+CG   + A+   G +Y+ G       G                L+ T VD  +  + V
Sbjct: 168 VSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATV 227

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           E   CG +H  ALT   +++ WG G  G+LG+G+ D    P  ++F     V  +  G +
Sbjct: 228 E---CGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRD 284

Query: 584 FTAIIC----LHKW 593
           F+  +     L+ W
Sbjct: 285 FSFALTDKGELYSW 298


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H   VT   +++  G  + G+LG G +  V+ P  ++ L    V+  ACG  HT
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G++Y  G  +   G LG G         ++S       +  +S G   +A +T 
Sbjct: 186 LVCTEGGNVYAAGGNS--DGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTE 243

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G L+ +GD S G +G     +  +P  V  + G   + VSCG +H+A V          
Sbjct: 244 DGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALV---------- 291

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG   ++ +    P+ V P I   + QVACG   +VALT 
Sbjct: 292 ----TTDGELYTFGEPENGKLGLSSEQLKNHRIPQLV-PGISGKVNQVACGGGHTVALTE 346

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  V+  + +  +  VACG  H A ++ T  +YT
Sbjct: 347 ED-VYTFGLGEFGQLGLGTCIFETSVPKVVE-HLRKQKIHYVACGENHTALISDTGLMYT 404

Query: 545 WGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G+++  N+  PTL        V  V CG
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACG 443



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 141/292 (48%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +  LY  G  + N G LG GSK +   P  V   L    + + +CG 
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLG--SNNWGQLGLGSKTTVNKPTCVKA-LKPEKVKFAACGR 182

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  S G LG GD                RTT      + +   + 
Sbjct: 183 NHTLVCTEGGNVYAAGGNSDGQLGLGDTEE-------------RTTFHQISFFTSRYKIK 229

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+L+ WGD  +G++G   +     P  V  +I + +  V+CG+  
Sbjct: 230 QLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYH 287

Query: 481 SVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +YT G    G+LG+    + +  +P  V G   +  V +VACG  H  ALT
Sbjct: 288 SALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGK--VNQVACGGGHTVALT 345

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
               VYT+G G  GQLG G      S P +V+ L+ +++  V CG N TA+I
Sbjct: 346 E-EDVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALI 396



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 35/312 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEIL 293
           P  V++     V   ACG  H ++ T+ G +++ G  S G+LG G  E   +  Q+    
Sbjct: 164 PTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFT 223

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+LY WGD +   G +G  S+ +  +P +V   + G  +
Sbjct: 224 SRYKIKQLSAGSNTSAALTEDGELYMWGDNS--EGQIGLASESNVCVPCRV---VIGKPV 278

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S++SCG +H+A+VT+ G L+TFG+   G LG       +  IP+ V  + G +  +V+CG
Sbjct: 279 SWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISG-KVNQVACG 337

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT A+                   ++T+G G+ G+LG G     +F    P+ V  L 
Sbjct: 338 GGHTVALTEE---------------DVYTFGLGEFGQLGLGTC---IFETSVPKVVEHLR 379

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVE 524
            + I  VACG + +  ++ +G +YT G   +G+LG+      +  +PT     +  S V 
Sbjct: 380 KQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFS-VH 438

Query: 525 EVACGAYHVAAL 536
            VACG  H+   
Sbjct: 439 LVACGGCHMLVF 450



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 15/171 (8%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVE 524
           L ++ + Q++CG + +  +T +  +Y +GS  +GQLG+     +  PT V     E  V+
Sbjct: 118 LRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEK-VK 176

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK-QVKRVVCGLN 583
             ACG  H    T    VY  G  ++GQLG GD + R +   + F   + ++K++  G N
Sbjct: 177 FAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSN 236

Query: 584 FTAIIC----LHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACS 630
            +A +     L+ W  + +  +        G   + + C  C +V  K  S
Sbjct: 237 TSAALTEDGELYMWGDNSEGQI--------GLASESNVCVPCRVVIGKPVS 279



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 11/103 (10%)

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           SG V+T G + + +         +P++    +    + +++CG  H A +T  SK+Y  G
Sbjct: 97  SGAVFTFGKSKFAEN--------IPSKF--WLRNDTLAQLSCGDEHTAFVTGNSKLYMLG 146

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
               GQLG G K   N PT V  LK ++VK   CG N T ++C
Sbjct: 147 SNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT-LVC 188



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIE 291
           +PK VE      +H +ACG  H  L++  G ++++G+   G+LG G E   +   P L  
Sbjct: 371 VPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCS 430

Query: 292 ILSGVNVELVACGEYH 307
                +V LVACG  H
Sbjct: 431 NFLRFSVHLVACGGCH 446


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 188/410 (45%), Gaps = 81/410 (19%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHG-------REA-DVSHPQLIEILSGVNVELVACGE 305
           +HA   + Q  +++WG  + G+LGHG       R A +   P+L+E   G  +  V  G 
Sbjct: 35  QHAF--STQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGA 92

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+   G LY WG   Y+   LG  S++   +PR+V   L G+ +  +SCG + TA 
Sbjct: 93  SHSAAIDEDGKLYVWGSNEYSKLGLGESSEMET-LPREVEA-LKGVKIVDVSCGDYFTAA 150

Query: 366 VTSAGHLFTFGDGS-----FGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAV 418
           V + G ++++G G       G LGH        PR + TL  +G+    V CG +HT A+
Sbjct: 151 VDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVAL 210

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         +  G+++ WG+G+ GRLG+G+ +    PE +     +N+  +A G 
Sbjct: 211 --------------SKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGV--------------PVA----DGLVPTRV------ 514
           D S ALT +G +Y+ G  +  QLG+              PV     +GL   ++      
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 515 ------DGE-----------------IAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
                 DG                  + E  + +VACG  +  AL+   +V+T+GKG++ 
Sbjct: 317 AAAVTDDGRLYMWGSKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSN 376

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG-LNFTAIICLHKWVSSVDHS 600
            LGHGD+ N+  P  ++ L D  +  + CG  +  AI   H   +  D S
Sbjct: 377 CLGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAIATPHAEAADKDFS 426



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 30/236 (12%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           +  + CG  H V ++K GEI++WG    GRLG+G       P+ IE  S  NV  +A G 
Sbjct: 197 ILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW----IPRKVSGNLDGIHLSYISCGLW 361
             + A+T +G+LY+WG  + N   +G G  +  +    IP  V    +G+ +  I+ G  
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEA-FNGLSVKQIAAGYD 315

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H A VT  G L+ +G   +             P E+  +   +  +V+CG  +T A+   
Sbjct: 316 HAAAVTDDGRLYMWGSKIW-----------IEPHEMTAVNEYKMVQVACGRQYTVAL--- 361

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
                      +  G++FT+G G    LGHGD++ +L P  +  L D NI  ++CG
Sbjct: 362 -----------SENGEVFTFGKGSSNCLGHGDRKNQLQPVQIEALADVNITSISCG 406



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 30/224 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G   G LG GE              +P+ +E     +V +IA G   +  +T
Sbjct: 214 GEIWAWGNG-EYGRLGNGESDT---------CEVPEPIEFFSKDNVVSIAAGRDFSFALT 263

Query: 261 KQGEIFSWGEESGGRLG--HGREADV----SHPQLIEILSGVNVELVACGEYHTCAVTRS 314
             GE++SWG  S  +LG   G   DV    S P L+E  +G++V+ +A G  H  AVT  
Sbjct: 264 DNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDD 323

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G LY WG            SK+  WI       ++   +  ++CG  +T  ++  G +FT
Sbjct: 324 GRLYMWG------------SKI--WIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFT 369

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           FG GS   LGHGD  +   P ++E L  +  T +SCG +H  A+
Sbjct: 370 FGKGSSNCLGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAI 413


>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Acyrthosiphon pisum]
          Length = 505

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 166/342 (48%), Gaps = 49/342 (14%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF +G+  + G LG G     Y          P  V+S     V +IACG  H ++ T
Sbjct: 53  GRVFCFGKN-SFGQLGLGHTENVYK---------PNCVKSLKPDKVKHIACGRSHTIVST 102

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQL-IEI--LSGVNVELVACGEYHTCAVTRSGDL 317
           +   ++ +G+ S G+LG    ADV+H  + IE+   +  N+  ++ G YHT A+  +GD+
Sbjct: 103 ENNIVYGFGDNSDGQLGQSV-ADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDV 161

Query: 318 YTWGDGTYNSGLLGHGS----KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           Y WG  +     LG  S     V+  +P  V   L    + Y+SCG  HTA VT  G L+
Sbjct: 162 YVWGSNSDRQ--LGLNSMDDDSVNVSVPTIVPIALP---VLYVSCGHTHTAFVTRIGDLY 216

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T GD  +G LGHG     S+ R V+T    +  +VSCG  HT A+               
Sbjct: 217 TCGDREYGKLGHG---LWSLSR-VDTTE--KIVKVSCGANHTIAL--------------N 256

Query: 434 SCGKLFTWGDGDKGRLG--HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             GK+F  G+ D G++G  +   +  L+P    P+ +E I Q+ CG   S  +T SG ++
Sbjct: 257 DAGKVFVCGNNDCGQIGLRNVTSQGHLYP---CPITNEPIVQIVCGQSHSAFITASGKLF 313

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESF-VEEVACGAYH 532
             G   YG+LG+ V     PT V   + ++  V+ V+CG  H
Sbjct: 314 MCGDGKYGKLGIDVNQITTPTLVLAFVDKNLNVQMVSCGGNH 355



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 169/355 (47%), Gaps = 45/355 (12%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  I+CG  H+ +V K G +F +G+ S G+LG G   +V  P  ++ L    V+ +ACG 
Sbjct: 36  VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGR 95

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGH--GSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            HT   T +  +Y +GD +   G LG          +P +V+   +  ++  +S G +HT
Sbjct: 96  SHTIVSTENNIVYGFGDNS--DGQLGQSVADVTHSDVPIEVT-RFNDKNIIQLSAGSYHT 152

Query: 364 AVVTSAGHLFTFGDGSFGALG----HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           A +   G ++ +G  S   LG      D ++ S+P  V     L    VSCG  HTA V 
Sbjct: 153 AALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPI--ALPVLYVSCGHTHTAFV- 209

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID--ENICQVACG 477
                        T  G L+T GD + G+LGHG     L+       +D  E I +V+CG
Sbjct: 210 -------------TRIGDLYTCGDREYGKLGHG-----LWS---LSRVDTTEKIVKVSCG 248

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLG---VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            + ++AL  +G V+  G+   GQ+G   V     L P  +  E     + ++ CG  H A
Sbjct: 249 ANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQGHLYPCPITNEP----IVQIVCGQSHSA 304

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK--QVKRVVCGLNFTAI 587
            +T++ K++  G G  G+LG  D +   +PTLV    DK   V+ V CG N T I
Sbjct: 305 FITASGKLFMCGDGKYGKLGI-DVNQITTPTLVLAFVDKNLNVQMVSCGGNHTLI 358



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 37/225 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL---LPKAVESTMALDVHNIACGARHAV 257
           GDV++WG           + ++G + S   D++   +P  V   +AL V  ++CG  H  
Sbjct: 159 GDVYVWG--------SNSDRQLGLN-SMDDDSVNVSVPTIV--PIALPVLYVSCGHTHTA 207

Query: 258 LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
            VT+ G++++ G+   G+LGHG  +      L  + +   +  V+CG  HT A+  +G +
Sbjct: 208 FVTRIGDLYTCGDREYGKLGHGLWS------LSRVDTTEKIVKVSCGANHTIALNDAGKV 261

Query: 318 YTWGDGTYNSGLLG------HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           +  G+   + G +G       G    C I  +         +  I CG  H+A +T++G 
Sbjct: 262 FVCGNN--DCGQIGLRNVTSQGHLYPCPITNE--------PIVQIVCGQSHSAFITASGK 311

Query: 372 LFTFGDGSFGALG-HGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           LF  GDG +G LG   + I+T         + L    VSCG  HT
Sbjct: 312 LFMCGDGKYGKLGIDVNQITTPTLVLAFVDKNLNVQMVSCGGNHT 356



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 16/172 (9%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G +FT+G     +    D  P  F     P+I     +++CG + S  +  +G V+  G 
Sbjct: 11  GAVFTYG-----KSSFADNIPSHFFIRNDPVI-----EISCGEEHSGIVCKNGRVFCFGK 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            ++GQLG+   + +        +    V+ +ACG  H    T  + VY +G  ++GQLG 
Sbjct: 61  NSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQLGQ 120

Query: 556 --GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKWVSSVDHSV 601
              D  + + P  V    DK + ++  G   TA +     ++ W S+ D  +
Sbjct: 121 SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQL 172


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG  R      P+ I+ L  
Sbjct: 15  RRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +NV+LV+CG+ H+ AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQ 132

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           +SCG +H+  ++    +F++G  S G LG G  + S + P+ V +L G+   +V+ G  H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENI 471
           + A+ +              CG  F WG    G+L    +   +    P  +  L +  +
Sbjct: 193 SFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGV 238

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVA 527
             ++CG + +  L   G V+T G  + GQLG  P  +   P    R+DG      V ++ 
Sbjct: 239 IYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQID 293

Query: 528 CGAYH-VAALTSTSKVYTWGKG-------ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           CG+YH +A + +T +V ++G G        + +   G+ D R   +  D L D QVK + 
Sbjct: 294 CGSYHTLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNFDIRCLISAED-LVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-TYANFVTTHQDTSS 368



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +V      +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA ++                GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTAVLI--------------QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVISFG 313



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+      V
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEV 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  +  LK+  V  + CG   TA++
Sbjct: 227 PLSIGALKNLGVIYISCGDEHTAVL 251



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++ + G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  ++    H        P  ++GN D      I 
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTH--------PEALTGNFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +    +V     H+F     +F    H D  STS P
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANF-VTTHQDTSSTSAP 372


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG  R      P+ I+ L  
Sbjct: 15  RRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +NV+LV+CG+ H+ AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQ 132

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           +SCG +H+  ++    +F++G  S G LG G  + S + P+ V +L G+   +V+ G  H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENI 471
           + A+ +              CG  F WG    G+L    +   +    P  +  L +  +
Sbjct: 193 SFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGV 238

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVA 527
             ++CG + +  L   G V+T G  + GQLG  P  +   P    R+DG      V ++ 
Sbjct: 239 IYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQID 293

Query: 528 CGAYH-VAALTSTSKVYTWGKG-------ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           CG+YH +A + +T +V ++G G        + +   G+ D R   +  D L D QVK + 
Sbjct: 294 CGSYHTLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNFDIRCLISAED-LVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-TYANFVTTHQDTSS 368



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +V      +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA ++                GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTAVLI--------------QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVISFG 313



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+      V
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEV 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  +  LK+  V  + CG   TA++
Sbjct: 227 PLSIGALKNLGVIYISCGDEHTAVL 251



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++ + G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  ++    H        P  ++GN D      I 
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTH--------PEALTGNFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +    +V     H+F     +F    H D  ST  P
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANF-VTTHQDTSSTGAP 372


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 181/378 (47%), Gaps = 50/378 (13%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ +S P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS--------KVSCWIPRKVSGNLDGIHLSYISCGL 360
              T +G +Y  G    N G LG G         ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T  G LF +GD S G +G  +  +  IP EV    G   + +SCG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV-- 243

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVAC 476
                       T+ G+L+T+G+ + G+LG  +   +L     +P     I + + QVAC
Sbjct: 244 ------------TTDGELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPDKVIQVAC 288

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           G   +V LT    VY  G   +GQLG+   + +   P  +D  I +  +  ++CG  H A
Sbjct: 289 GGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIID-RIKDQKISHISCGENHTA 346

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCGLNFTAIICLH 591
            +T    +YT+G G +G+LG G ++  N+  PTL  +FLK   V+ + CG     +    
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLK-FTVQLIACGGCHMLVFATP 405

Query: 592 KWVSSVDHSVCSSCHNPF 609
           + + ++D +     + P+
Sbjct: 406 R-LGTIDETEFEEVYEPY 422



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   D      I   +
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +K +  IP +V+    G  +
Sbjct: 176 PSDIIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLKNKSNVCIPHEVTV---GKPI 230

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  + +  +  R  + + G+  +  +V+CG
Sbjct: 231 SWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACG 289

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+              ++ +G G  G+LG G     LF    P+ +  + 
Sbjct: 290 GGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIDRIK 331

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V+
Sbjct: 332 DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFT-VQ 390

Query: 525 EVACGAYHVAALTS 538
            +ACG  H+    +
Sbjct: 391 LIACGGCHMLVFAT 404



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   +  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLTEKV-VY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    +S+ISCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH--MLVFAT 404



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 27/226 (11%)

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++V   G +FTFG   F         + +IP +    +      +SCG  HTA V     
Sbjct: 44  SLVPDTGAVFTFGKTKF---------AENIPSKF-WFKNDVPICLSCGDEHTAIV----- 88

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P C+  L  E +   ACG + ++ 
Sbjct: 89  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLV 139

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES-FVEEVACGAYHVAALTSTSKV 542
            T +G VY  G    GQLG+   D        G    S  +++++ GA   AALT   K+
Sbjct: 140 STDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKL 199

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + WG  + GQ+G  +K N   P  V     K +  + CG   +A +
Sbjct: 200 FMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV 243


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG  R      P+ I+ L  
Sbjct: 15  RRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +NV+LV+CG+ H+ AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQ 132

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           +SCG +H+  ++    +F++G  S G LG G  + S + P+ V +L G+   +V+ G  H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENI 471
           + A+ +              CG  F WG    G+L    +   +    P  +  L +  +
Sbjct: 193 SFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGV 238

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVA 527
             ++CG + +  L   G V+T G  + GQLG  P  +   P    R+DG      V ++ 
Sbjct: 239 IYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQID 293

Query: 528 CGAYH-VAALTSTSKVYTWGKG-------ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           CG+YH +A + +T +V ++G G        + +   G+ D R   +  D L D QVK + 
Sbjct: 294 CGSYHTLAYVHTTGQVISFGHGPSDKSKPTHPEALTGNFDIRCLISAED-LVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-TYANFVTTHQDTSS 368



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +V      +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA ++                GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTAVLI--------------QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVISFG 313



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+      V
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEV 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  +  LK+  V  + CG   TA++
Sbjct: 227 PLSIGALKNLGVIYISCGDEHTAVL 251



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++ + G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  +     H        P  ++GN D      I 
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTH--------PEALTGNFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +    +V     H+F     +F    H D  STS P
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANF-VTTHQDTSSTSAP 372


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 183/411 (44%), Gaps = 39/411 (9%)

Query: 181 LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           L S V++ + G  H       G V  WG   +      G+   G +F R T    P AV 
Sbjct: 255 LPSGVTAIAAGGVHTCALTGSGGVRCWGANYS------GQLGNGLTFGRST----PGAV- 303

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S +   V  IA G  H   +T  G ++ WG    G+LG G     S P  +  L    VE
Sbjct: 304 SGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLP-SGVE 362

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G+YHTCA+  SG +  WG    + G LG G+  +   P  VSG   G+  + I+ G
Sbjct: 363 TIAAGDYHTCALMSSGGVRCWGH--NDRGQLGDGTTTARSTPVAVSGLPSGV--TAIAAG 418

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAV 418
             HT   TS+G ++ +GD S G LG G    +S P  V  L  G+ T  ++ G WHT A+
Sbjct: 419 RLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVET--IAAGGWHTCAL 476

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G ++ WG  + G+LG G     + P  V+ L    +  +A G 
Sbjct: 477 --------------TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL-PSGVTAIAAGG 521

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             + ALT SG V+  G    GQLG     D   P  V G    S V  +A G  H  ALT
Sbjct: 522 VHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGL--PSGVTAIAAGDIHTCALT 579

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +  V+ WG    GQLG G   NR++P  V  L    V  +  GL +T  +
Sbjct: 580 GSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG-VTAIAAGLRYTCAL 629



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 153/337 (45%), Gaps = 24/337 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P AV S +   V  IA G  H    T  G ++ WG+ S G+LG G   D S P  +  L+
Sbjct: 402 PVAV-SGLPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLA 460

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              VE +A G +HTCA+T SG ++ WG    NSG LG GS +    P  VSG   G+  +
Sbjct: 461 -SGVETIAAGGWHTCALTGSGGVWCWGR--NNSGQLGDGSTIYHITPVAVSGLPSGV--T 515

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            I+ G  HT  +T +G ++ +G    G LG G     S P  V  L     T ++ G  H
Sbjct: 516 AIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLP-SGVTAIAAGDIH 574

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           T A+              T  G ++ WG  D G+LG G    R  P  V+ L    +  +
Sbjct: 575 TCAL--------------TGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGL-PSGVTAI 619

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           A G   + ALT SG V+  G    GQL         P  V G    S V  +A G ++  
Sbjct: 620 AAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGL--PSGVTAIAAGGWYTC 677

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           A TS+  V  WG   +GQLG G    R++P  V  L 
Sbjct: 678 ARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLP 714



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 173/391 (44%), Gaps = 37/391 (9%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V+ WG          G +R        TD   P AV S +  +V  IA G  H   
Sbjct: 172 SSGGVWCWG----------GNYRGQLGDGTTTDRSTPVAV-SGLPSEVTAIAAGDAHTCA 220

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
               GE++ WG  + G+LG G   D S P  +  L    V  +A G  HTCA+T SG + 
Sbjct: 221 RMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVR 279

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG     SG LG+G       P  VSG   G+  + I+ G +HT  +T +G ++ +G  
Sbjct: 280 CWG--ANYSGQLGNGLTFGRSTPGAVSGLPSGV--TAIAAGDYHTCALTGSGGVWCWGGN 335

Query: 379 SFGALGHGDHISTSIPREVETL-RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
             G LG G   + S P  V  L  G+ T  ++ G +HT A++              S G 
Sbjct: 336 YSGQLGDGTTTARSTPVAVSGLPSGVET--IAAGDYHTCALM--------------SSGG 379

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +  WG  D+G+LG G    R  P  V+ L    +  +A G   + A T+SG V+  G  +
Sbjct: 380 VRCWGHNDRGQLGDGTTTARSTPVAVSGL-PSGVTAIAAGRLHTCARTSSGGVWCWGDNS 438

Query: 498 YGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            GQLG     D   P  V G    S VE +A G +H  ALT +  V+ WG+  +GQLG G
Sbjct: 439 DGQLGDGSFTDSSTPVAVSGL--ASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDG 496

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
                 +P  V  L          G++  A+
Sbjct: 497 STIYHITPVAVSGLPSGVTAIAAGGVHTCAL 527



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 148/327 (45%), Gaps = 24/327 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  IA G  H    T  G ++ WG    GRLG G   D S P  +  L    V  +A G 
Sbjct: 55  VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLP-SGVTAIAAGG 113

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HTCA+T SG+++ WG   Y  G LG GS  +   P  VSG   G+  + I+ G WHT  
Sbjct: 114 AHTCALTSSGEVWCWGSNFY--GQLGDGSYTTRSTPVAVSGLPSGV--TAIAAGGWHTCA 169

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            TS+G ++ +G    G LG G     S P  V  L     T ++ G  HT A +      
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLP-SEVTAIAAGDAHTCARM------ 222

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                   S G+++ WG  + G+LG G       P  V+ L    +  +A G   + ALT
Sbjct: 223 --------SSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGL-PSGVTAIAAGGVHTCALT 273

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            SG V   G+   GQLG  +  G   P  V G    S V  +A G YH  ALT +  V+ 
Sbjct: 274 GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL--PSGVTAIAAGDYHTCALTGSGGVWC 331

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLK 571
           WG   +GQLG G    R++P  V  L 
Sbjct: 332 WGGNYSGQLGDGTTTARSTPVAVSGLP 358



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 167/378 (44%), Gaps = 43/378 (11%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V+ WG G   G LG G +         TD+  P AV S +   V  IA G  H   
Sbjct: 70  SSGGVWCWG-GNDFGRLGDGSY---------TDSSTPVAV-SGLPSGVTAIAAGGAHTCA 118

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T  GE++ WG    G+LG G     S P  +  L    V  +A G +HTCA T SG ++
Sbjct: 119 LTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLP-SGVTAIAAGGWHTCARTSSGGVW 177

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG G Y  G LG G+      P  VSG      ++ I+ G  HT    S+G ++ +G  
Sbjct: 178 CWG-GNYR-GQLGDGTTTDRSTPVAVSGLPS--EVTAIAAGDAHTCARMSSGEVWCWGGN 233

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           ++G LG G +  +S P  V  L    T   + GV HT A+              T  G +
Sbjct: 234 NYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGV-HTCAL--------------TGSGGV 278

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
             WG    G+LG+G    R  P  V+ L    +  +A G   + ALT SG V+  G    
Sbjct: 279 RCWGANYSGQLGNGLTFGRSTPGAVSGL-PSGVTAIAAGDYHTCALTGSGGVWCWGGNYS 337

Query: 499 GQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           GQLG    DG       P  V G    S VE +A G YH  AL S+  V  WG    GQL
Sbjct: 338 GQLG----DGTTTARSTPVAVSGL--PSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQL 391

Query: 554 GHGDKDNRNSPTLVDFLK 571
           G G    R++P  V  L 
Sbjct: 392 GDGTTTARSTPVAVSGLP 409



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 18/220 (8%)

Query: 181 LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           L S V++ + G  H       G V+ WG    N F   G+   G + +R T    P AV 
Sbjct: 561 LPSGVTAIAAGDIHTCALTGSGGVWCWG---GNDF---GQLGDGTTTNRST----PVAV- 609

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S +   V  IA G R+   +T  G ++ WG    G+L  G  +  +   +  + SGV   
Sbjct: 610 SGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGLPSGVTA- 668

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G ++TCA T SG +  WG     SG LG G+      P  VSG   G+  + I+ G
Sbjct: 669 -IAAGGWYTCARTSSGGVRCWG--ANGSGQLGDGTTTKRSTPVAVSGLPSGV--TAIAAG 723

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
             HT  + S+G ++ +G    G LG G  +  + P +V T
Sbjct: 724 GEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDVVT 763



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
           RL     +PL  + +  +A G   + A T+SG V+  G   +G+LG     D   P  V 
Sbjct: 43  RLHTSSFSPL--QGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVS 100

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           G    S V  +A G  H  ALTS+ +V+ WG    GQLG G    R++P  V  L 
Sbjct: 101 GL--PSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLP 154


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 166/340 (48%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  +P++V    G   + +SCG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK---EPRLFPECVAPLIDENICQVACGHDLSVALT 485
               T+ G+L+T+G+ + G+LG  ++     R+ P+ V P I E + QVACG   +V LT
Sbjct: 206 ----TTEGELYTFGEPESGKLGLPNQLLCNHRM-PQPV-PGIPEKVVQVACGGGHTVVLT 259

Query: 486 TSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
               VYT G   +GQLG+   + +  VP  ++  + +  +  ++CG  H A +T    +Y
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFLFETSVPKVIE-HVKDQKISSISCGENHTALITDIGLMY 317

Query: 544 TWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           T+G G  G+LG G ++  N+  PTL         + V CG
Sbjct: 318 TFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCG 357



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 25/293 (8%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           +++CG+ HT  VT +  LY +  G+ N G LG GSK +   P  V   L    + + +CG
Sbjct: 39  VLSCGDEHTAVVTGNKKLYMF--GSNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT V T  G ++  G  + G LG GD                R T      + +   +
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEE-------------RNTFHLISFFTSQHKI 142

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               + S++ +  T  G+LF WGD  +G++G  D      P+ V   + + I  ++CG+ 
Sbjct: 143 KQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVT--VGKPISWISCGYY 200

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +TT G +YT G    G+LG+P   + +  +P  V G I E  V +VACG  H   L
Sbjct: 201 HSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPG-IPEKVV-QVACGGGHTVVL 258

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T  + VYT+G G  GQLG G      S P +++ +KD+++  + CG N TA+I
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALI 310



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 155/312 (49%), Gaps = 35/312 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + +   LI   +
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G+L+ WGD +   G +G     +  +P++V+    G  +
Sbjct: 138 SQHKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLKDVTNVCVPQQVTV---GKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI--STSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  + +  +  +P+ V  +   +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE-KVVQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 252 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETSVPKVIEHVK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D+ I  ++CG + +  +T  G +YT G   YG+LG+ +    +  +PT           +
Sbjct: 294 DQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLC-SHFLRFIAQ 352

Query: 525 EVACGAYHVAAL 536
            V+CG  H+   
Sbjct: 353 LVSCGGCHMLVF 364



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 20/224 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LKDVTNVCVPQQV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG   +   +H ++ + + G+   V  VACG  HT  +T    +Y
Sbjct: 207 TEGELYTFGEPESGKLGLPNQLLCNH-RMPQPVPGIPEKVVQVACGGGHTVVLTEKA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  ++    +S ISCG  HTA++T  G ++TFGDG
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            +G LG G  +  +  +P             VSCG  H     V
Sbjct: 323 RYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFAV 366



 Score = 42.7 bits (99), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIE 291
           +PK +E      + +I+CG  H  L+T  G ++++G+   G+LG G E   +   P L  
Sbjct: 285 VPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLCS 344

Query: 292 ILSGVNVELVACGEYHTC--AVTRSG 315
                  +LV+CG  H    AV R G
Sbjct: 345 HFLRFIAQLVSCGGCHMLVFAVPRLG 370


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 17/214 (7%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEY 306
            I CG  H++ ++K GE+F+WG+   G+LG GR  A +  PQL+E LSGV +  ++ G+ 
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKA 110

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H+ A++ SG++Y+WG    + G LG G       P  V   LD   + +++CG  HTA++
Sbjct: 111 HSMALSMSGNIYSWGRN--DLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGGSHTALL 167

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T  G +FTFG G  G LGH    +   PR V  L G+R T+V+CG  HT A V       
Sbjct: 168 TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV------- 220

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                 +  GK+F++G G +G+LG+G    +L P
Sbjct: 221 ------SDLGKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 29/260 (11%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + +H++  GA H ++++  G+ F +               + H +   IL   ++  + C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 54

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+YH+ A+++ G+L+ WG   +  G LG G   +     ++  +L G+ L  IS G  H+
Sbjct: 55  GDYHSLALSKGGELFAWGQNLH--GQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHS 112

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             ++ +G+++++G    G LG G       P  VE L   +   ++CG  HTA +     
Sbjct: 113 MALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALL----- 167

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T  G++FT+G G  G+LGH   +  L P  V  L    + QVACG   ++A
Sbjct: 168 ---------TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLA 218

Query: 484 LTTS-GHVYTMGSAAYGQLG 502
             +  G V++ GS   GQLG
Sbjct: 219 YVSDLGKVFSFGSGKEGQLG 238



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 16/223 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    S   P+ VE L G+   ++S G  H
Sbjct: 52  ITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAH 111

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G  +   FP  V  L  + +  +
Sbjct: 112 SMALSMS--------------GNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFL 157

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACG   +  LT  G V+T G+  +GQLG       +  R+  E+    V +VACG  H  
Sbjct: 158 ACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTL 217

Query: 535 ALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           A  S   KV+++G G  GQLG+G   N+  P  +    ++ +K
Sbjct: 218 AYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLK 260



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     +G  F+       P+ VE    + +  I+
Sbjct: 56  DYHSLALSKGGELFAWGQNL-HGQLG-----IGRLFASIPT---PQLVEHLSGVPLVQIS 106

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG    G+LG G       P L+E L    VE +ACG  HT  
Sbjct: 107 AGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTAL 166

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T  G ++T+G G +  G LGH S  +   PR V+  L GI ++ ++CG  HT A V+  
Sbjct: 167 LTEDGQVFTFGAGKH--GQLGHNSTQNELRPRLVT-ELTGIRVTQVACGRRHTLAYVSDL 223

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 224 GKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 25/181 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-----PE 461
           +++CG +H+ A+              +  G+LF WG    G+LG G    RLF     P+
Sbjct: 51  QITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGIG----RLFASIPTPQ 92

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
            V  L    + Q++ G   S+AL+ SG++Y+ G    GQLG+   DG   P+ V+   ++
Sbjct: 93  LVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQ 152

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT   +V+T+G G +GQLGH    N   P LV  L   +V +V C
Sbjct: 153 K-VEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVAC 211

Query: 581 G 581
           G
Sbjct: 212 G 212



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 3/129 (2%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIA 519
           +C+  L +++I Q+ CG   S+AL+  G ++  G   +GQLG+      +PT ++   ++
Sbjct: 41  QCI--LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLS 98

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + +++ G  H  AL+ +  +Y+WG+   GQLG G  D    P+LV+ L  ++V+ + 
Sbjct: 99  GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLA 158

Query: 580 CGLNFTAII 588
           CG + TA++
Sbjct: 159 CGGSHTALL 167


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 154/339 (45%), Gaps = 30/339 (8%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           ++ACG  H  LVT+ G +F++G    G+LG       + P  ++ L    V++VACG  H
Sbjct: 40  SVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIH 99

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T   T SG LYT+  G    G LG     S   P KV    +      ++ G  H+  +T
Sbjct: 100 TIVATESGCLYTF--GANGDGQLGVEDIPSSNCPVKV--ECEPRQYKALAAGADHSVALT 155

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G L+ +G GS G LG GD    S P  + T    +   V+CG +HTA V         
Sbjct: 156 DDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVISVACGYYHTAFV--------- 204

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL---IDENICQVACGHDLSVAL 484
                T  G++FT+G+GD G+LG G      + + VAP    I E    VACG   +V L
Sbjct: 205 -----TDVGEVFTFGEGDGGKLGQGTD----YGKAVAPKKVNIPEKAKSVACGGSHTVVL 255

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           T  G VYT G    GQLG         T V        V ++A G  H A +T   ++YT
Sbjct: 256 TECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHK-VTQIAAGENHTALVTEKGQLYT 314

Query: 545 WGKGANGQLG--HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +G G + +LG  H    N+  P          V +V CG
Sbjct: 315 FGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCG 353



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 165/354 (46%), Gaps = 48/354 (13%)

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVS---CWIPRKVSGNL 348
           + G   + VACG+ HT  VT SG L+T+G   +  G LG    KVS   C + +     L
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDW--GQLGIDEVKVSTRPCCVKK-----L 85

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
               +  ++CG  HT V T +G L+TFG    G LG  D  S++ P +VE          
Sbjct: 86  KPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVE---------- 135

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
            C      A+    D S +     T  G+L+ WG G +G+LG GD + +  P  ++   D
Sbjct: 136 -CEPRQYKALAAGADHSVA----LTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLS--TD 188

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEV 526
             +  VACG+  +  +T  G V+T G    G+L  G      + P +V+  I E   + V
Sbjct: 189 NKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVN--IPEK-AKSV 245

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR-NSPTLVDFLKDKQVKRVVCGLNFT 585
           ACG  H   LT   KVYT+G+G NGQLGH +K     +P  ++F    +V ++  G N T
Sbjct: 246 ACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNF--KHKVTQIAAGENHT 303

Query: 586 AIICLHKWVSS----------VDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKAC 629
           A++     + +          +DH   S+ +  F  R KR + +    V C  C
Sbjct: 304 ALVTEKGQLYTFGDGRHAKLGLDHECYSNQY--FPQRSKRFSKFIVTQVSCGGC 355



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 34/309 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+      V  +ACG  H ++ T+ G ++++G    G+LG       + P  +E   
Sbjct: 79  PCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVEC-E 137

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
               + +A G  H+ A+T  G+LY WG G+   G LG G       P  +S +   I   
Sbjct: 138 PRQYKALAAGADHSVALTDDGELYVWGGGS--EGQLGLGDIDDKSTPTLLSTDNKVIS-- 193

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVW 413
            ++CG +HTA VT  G +FTFG+G  G LG G D+     P++V      ++  V+CG  
Sbjct: 194 -VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKS--VACGGS 250

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL---IDEN 470
           HT  +              T CGK++T+G+G  G+LGH +K    +  C  P+       
Sbjct: 251 HTVVL--------------TECGKVYTFGEGGNGQLGHKNK----YFYCETPVWLNFKHK 292

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVA 527
           + Q+A G + +  +T  G +YT G   + +LG+     ++   P R     ++  V +V+
Sbjct: 293 VTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSK-RFSKFIVTQVS 351

Query: 528 CGAYHVAAL 536
           CG  H+  L
Sbjct: 352 CGGCHMIVL 360



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 112/224 (50%), Gaps = 29/224 (12%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +  +G +FTFG   F     GD++          +RG +   V+CG  HTA V       
Sbjct: 9   IPESGAIFTFGKSRF-----GDNLPNKF-----WVRGDKAKSVACGDEHTALV------- 51

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G+LFT+G  D G+LG  + +    P CV  L  E +  VACG   ++  T
Sbjct: 52  -------TESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVAT 104

Query: 486 TSGHVYTMGSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            SG +YT G+   GQLGV  +     P +V+ E  +   + +A GA H  ALT   ++Y 
Sbjct: 105 ESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQ--YKALAAGADHSVALTDDGELYV 162

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           WG G+ GQLG GD D++++PTL+    D +V  V CG   TA +
Sbjct: 163 WGGGSEGQLGLGDIDDKSTPTLLS--TDNKVISVACGYYHTAFV 204



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 29/221 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD--VHNIACGARHAVL 258
           G++++WG G + G LG G+             +  K+  + ++ D  V ++ACG  H   
Sbjct: 158 GELYVWGGG-SEGQLGLGD-------------IDDKSTPTLLSTDNKVISVACGYYHTAF 203

Query: 259 VTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           VT  GE+F++GE  GG+LG G +      P+ + I      + VACG  HT  +T  G +
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKV 261

Query: 318 YTWGDGTYNSGLLGHGSK-VSCWIPRKVSGNLDGIH-LSYISCGLWHTAVVTSAGHLFTF 375
           YT+G+G   +G LGH +K   C  P      L+  H ++ I+ G  HTA+VT  G L+TF
Sbjct: 262 YTFGEG--GNGQLGHKNKYFYCETPVW----LNFKHKVTQIAAGENHTALVTEKGQLYTF 315

Query: 376 GDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWH 414
           GDG    LG  H  + +   P+  +       T+VSCG  H
Sbjct: 316 GDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCH 356



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 20/131 (15%)

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR--VDGEIAESFVEEVACGAY 531
           +A G D  +    SG ++T G + +G       D L P +  V G+ A+S    VACG  
Sbjct: 1   MAAGDDSEIP--ESGAIFTFGKSRFG-------DNL-PNKFWVRGDKAKS----VACGDE 46

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII--- 588
           H A +T + +++T+G    GQLG  +      P  V  LK ++VK V CG   T +    
Sbjct: 47  HTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATES 106

Query: 589 -CLHKWVSSVD 598
            CL+ + ++ D
Sbjct: 107 GCLYTFGANGD 117


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG  R      P+ I+ L  
Sbjct: 15  RRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           +NV+LV+CG+ H+ AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQ 132

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           +SCG +H+  ++    +F++G  S G LG G  + S + P+ V +L G+   +V+ G  H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENI 471
           + A+ +              CG  F WG    G+L    +   +    P  +  L +  +
Sbjct: 193 SFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGV 238

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVA 527
             ++CG + +  L   G V+T G  + GQLG  P  +   P    R+DG      V ++ 
Sbjct: 239 IYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQID 293

Query: 528 CGAYH-VAALTSTSKVYTWGKG-------ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           CG+YH +A + +T +V ++G G        + +   G+ D R   +  D L D QVK + 
Sbjct: 294 CGSYHTLAYVHTTGQVISFGHGPSDKSKPTHPEALTGNFDIRCLISAED-LVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-TYANFVTTHQDTSS 368



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +V      +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA ++                GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTAVLI--------------QDGKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVISFG 313



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+      V
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEV 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  +  LK+  V  + CG   TA++
Sbjct: 227 PLSIGALKNLGVIYISCGDEHTAVL 251



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++ + G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  +     H        P  ++GN D      I 
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTH--------PEALTGNFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +    +V     H+F     +F    H D  STS P
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANF-VTTHQDTSSTSAP 372


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 26/306 (8%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G  H++L+   G + S G+ S G+LG         P+ I  L  ++V LV+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           AV   G ++ WG  +   G LG G  K + +IP+K+   L GI +  ++CG +H+  ++ 
Sbjct: 89  AVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145

Query: 369 AGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            G +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+         
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196

Query: 428 SPSGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHDLSVAL 484
           S SG++     F WG  + G+L   G+  P  R  P  +  L    +  ++CG+  +  L
Sbjct: 197 SLSGTS-----FGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKV 542
           T  G V+T G  +YGQLG  P A+   P  V  E  E  V ++ CG+ H +A + +T +V
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV--ERIEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 543 YTWGKG 548
            ++G+G
Sbjct: 310 VSFGRG 315



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 22/258 (8%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +R  A ET  ++L S     S    H+     G VF WG   + G LG GE +       
Sbjct: 67  ERIPALETLHVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLGIGEFK------- 113

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHP 287
                +PK +++   + +  +ACG  H+V +++ G++FSWG  S G+LG G+E    + P
Sbjct: 114 -ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASP 172

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL---GHGSKVSCWIPRKV 344
           Q +  L G+ +  VA G +H+ A++ SG  + WG    N+G L   G+ + V  + P  +
Sbjct: 173 QRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSN--NAGQLALSGNNAPVQRYKPVSI 230

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            G L  + +  ISCG  HTAV+T  G +FTFGD S+G LGH        P+ VE + GL 
Sbjct: 231 -GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL- 288

Query: 405 TTRVSCGVWHTAAVVVAT 422
            +++ CG  HT A +  T
Sbjct: 289 VSQIDCGSDHTLAYIYTT 306



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 22/265 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ + +   L V  ++CG  H++ V  +G +F+WG  S G+LG G   + +  P+ I+ L
Sbjct: 66  PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  VACG YH+ A++  G +++W  GT + G LG G +       +   +L+GI L
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSW--GTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVSC 410
           + ++ G  H+  ++ +G  F +G  + G L   G+   +    P  +  L+ L    +SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  GK+FT+GD   G+LGH     +  P+ V   I+  
Sbjct: 244 GYKHTAVL--------------TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGL 288

Query: 471 ICQVACGHDLSVA-LTTSGHVYTMG 494
           + Q+ CG D ++A + T+G V + G
Sbjct: 289 VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 26/302 (8%)

Query: 291 EILSGVNVEL-VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           ++ +G N  L  A GE+H+  +   G + + GD +   G LG         P ++   L+
Sbjct: 17  QVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNS--RGQLGRKGTPRGEQPERIPA-LE 73

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRV 408
            +H++ +SCG  H+  V   G +F +G  S G LG G+   T+ IP++++TL G++  +V
Sbjct: 74  TLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQV 133

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLI 467
           +CG +H+ A+              +  G++F+WG    G+LG G + P +  P+ V  L 
Sbjct: 134 ACGHYHSVAL--------------SEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFV 523
              + QVA G   S AL+ SG  +  GS   GQL +   +  V    P  + G +    V
Sbjct: 180 GIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSI-GALKTLGV 238

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
             ++CG  H A LT   KV+T+G  + GQLGH     +  P LV+ + +  V ++ CG +
Sbjct: 239 VSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSD 297

Query: 584 FT 585
            T
Sbjct: 298 HT 299



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  H+ ++ S G + + GD S G LG         P  +  L  L    VSCG  H+ AV
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 90

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACG 477
                            G++F WG   +G+LG G+ KE    P+ +  L    I QVACG
Sbjct: 91  CHK--------------GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACG 136

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHV 533
           H  SVAL+  G V++ G+ ++GQLG+       P++   +   S     + +VA G +H 
Sbjct: 137 HYHSVALSEDGQVFSWGTNSHGQLGLGKE---FPSQASPQRVRSLEGIPLAQVAAGGHHS 193

Query: 534 AALTSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
            AL+ +   + WG    GQL   G+     R  P  +  LK   V  + CG   TA++  
Sbjct: 194 FALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253

Query: 591 HKWVSSV-DHSVCSSCHNPFGFRR 613
              V +  D+S     H+P   +R
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKR 277



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 27/169 (15%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +   L V +I+CG +H  ++T+ G++F++G+ S G+LGH   A+   PQL+E + 
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDG------TYNSGLLGHGSKVSCWIPRKVSGN 347
           G+ V  + CG  HT A +  +G + ++G G      + + G L   S +SC +  K   +
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGALAESSDISCLVSAK---D 342

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           L  + + +I  G +   V TS                  D  STS+PR+
Sbjct: 343 LADVQVKHIFAGTYANFVTTS----------------QKDTSSTSVPRK 375


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 167/357 (46%), Gaps = 33/357 (9%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC- 303
           + +IA G     +V K G +F+ G    G+ G+G  E  V     +  LSG+ + +VA  
Sbjct: 504 IRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAA 563

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGL 360
            G  H  AV   G +Y+WG   YN  G LG GS +S    PR +    +  H++  +   
Sbjct: 564 NGCEHMLAVASDGAVYSWG---YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSY 620

Query: 361 WHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            H+AVV+S G L  FG    G LG  H  H  T  P+ V++L     T V+CG++HT A+
Sbjct: 621 HHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHT--PQLVDSLSSQVITEVACGLYHTIAI 678

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI---DENICQVA 475
                         TS G+++++G  D G+LG G       P  V   +   DE I  V+
Sbjct: 679 --------------TSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVS 724

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CG+  +V ++  G + T G   YGQLG+   D     +       S ++  +CG YH   
Sbjct: 725 CGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLI 784

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS----PTLVDFLKDKQVKRVVCGLNFTAII 588
           L S  +V  +G+   GQLG G +   ++    P   + L + +V R+  G   + I+
Sbjct: 785 LMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 841



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 160/333 (48%), Gaps = 25/333 (7%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+FS G+ + G L  G     S  + +   S   +  +A G      V + G ++T G  
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCG-- 527

Query: 324 TYNSGLLGHGS---KVSCWIP-RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
              SG  G+G+   +V    P R +SG +  I++   + G  H   V S G ++++G   
Sbjct: 528 LNKSGQCGNGTFEERVIIATPVRALSGIV--INMVAAANGCEHMLAVASDGAVYSWGYND 585

Query: 380 FGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G  IS S  PR +++LR       +   +H +AVV             +S G+L
Sbjct: 586 RGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVV-------------SSNGEL 632

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
             +G  D G+LG    + +  P+ V  L  + I +VACG   ++A+T+ G VY+ G   Y
Sbjct: 633 LMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDY 692

Query: 499 GQLGVPVADGL-VPTRVDGEIAES--FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
           GQLG+  A  + VPT V   + ES   +  V+CG YH   ++   K+ TWG+   GQLG 
Sbjct: 693 GQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGI 752

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G KD++NS   V      ++K   CG   T I+
Sbjct: 753 GSKDHKNSAQYVPLPLSSKIKTASCGCYHTLIL 785



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 28/326 (8%)

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           +F  +     P    S + +++   A G  H + V   G ++SWG    G+LG G     
Sbjct: 538 TFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISK 597

Query: 285 SH-PQLIEIL-SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           SH P++I+ L    ++   A   +H+  V+ +G+L  +G    + G LG         P+
Sbjct: 598 SHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG--MNDCGQLGLDHTQHQHTPQ 655

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
            V  +L    ++ ++CGL+HT  +TS G +++FG   +G LG G   +  +P  V+T  G
Sbjct: 656 LVD-SLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLG 714

Query: 403 L---RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
               +   VSCG +HT  +              +  GKL TWG  D G+LG G K+ +  
Sbjct: 715 ESDEKIVAVSCGYYHTVTI--------------SEKGKLITWGRNDYGQLGIGSKDHKNS 760

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRV 514
            + V   +   I   +CG   ++ L ++G V   G    GQLG     +P AD  +P   
Sbjct: 761 AQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPS 820

Query: 515 DGEIAESFVEEVACGAYHVAALTSTS 540
           +  +A   V  +A G Y    LT  S
Sbjct: 821 N-SLANDEVVRIAAGFYSSYILTGRS 845



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 130/296 (43%), Gaps = 40/296 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG     G LG G         R  D+L  K   +T A+  H       H+ +V+
Sbjct: 576 GAVYSWGYN-DRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH-------HSAVVS 627

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             GE+  +G    G+LG         PQL++ LS   +  VACG YHT A+T  G++Y++
Sbjct: 628 SNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSF 687

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G   Y    LGH   +      K S       +  +SCG +HT  ++  G L T+G   +
Sbjct: 688 GKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDY 747

Query: 381 GALGHG--DHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LG G  DH +++  +P  + +    +    SCG +HT  ++              S G
Sbjct: 748 GQLGIGSKDHKNSAQYVPLPLSS----KIKTASCGCYHTLILM--------------SNG 789

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAP-------LIDENICQVACGHDLSVALT 485
           ++  +G  +KG+LG G    R  P    P       L ++ + ++A G   S  LT
Sbjct: 790 RVMVFGRNNKGQLGAGS---RTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H VLVT  G+++ +G  + G+LG    + +S P  ++ L    V L ACG +HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G LY+ G  +   G LG G        +++S       +  +S G   +A +T 
Sbjct: 102 LVYTEQGKLYSSGGNS--EGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTV 159

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G LG         P++V+T  G     +SCG +H+A V          
Sbjct: 160 DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDT--GKPIAWISCGYYHSAFV---------- 207

Query: 429 PSGSTSCGKLFTWGDGDKGRLG-HGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T  G+L+T+G+ + G+LG   DK +    P+ V  L  + +  V+CG + ++A+T 
Sbjct: 208 ----TQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAVTE 262

Query: 487 SGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQL  G  + +  +P  VD  + +  +  V CG  H A +T    +YT
Sbjct: 263 K-EVYTFGLGQFGQLGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITEKGLLYT 320

Query: 545 WGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
           +G G +G+LG G+++  N+  P L  +FLK   V+ V CG
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLK-FTVQSVACG 359



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 148/309 (47%), Gaps = 35/309 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T+QG+++S G  S G+LG G  A  +  Q I   +
Sbjct: 80  PTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFT 139

Query: 295 G-VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               ++ ++ G   + A+T  G L+ WGD +   G LG         P+KV     G  +
Sbjct: 140 AQYKIKQLSAGSNMSAALTVDGKLFMWGDNS--EGQLGLEKGTIYCTPQKVD---TGKPI 194

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIST-SIPREVETLRGLRTTRVSCG 411
           ++ISCG +H+A VT  G L+TFG+   G LG   D I     P+ V  L G + T VSCG
Sbjct: 195 AWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSG-KVTMVSCG 253

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT AV                  +++T+G G  G+LGHG     +F    P+ V  L 
Sbjct: 254 GEHTIAVTEK---------------EVYTFGLGQFGQLGHGT---FIFETHIPKAVDALT 295

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVE 524
            + I  V CG + +  +T  G +YT G   +G+LG+      +  VP      +  + V+
Sbjct: 296 KKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFT-VQ 354

Query: 525 EVACGAYHV 533
            VACG  H+
Sbjct: 355 SVACGGCHM 363



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G  + N G LG  +  +   P  V   L    +   +CG 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFG--SNNWGQLGVEAGSAISKPTCVKA-LKSEKVVLAACGR 98

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG-LRTTRVSCGVWHTAAVV 419
            HT V T  G L++ G  S G LG GD    +  +E+       +  ++S G   +AA+ 
Sbjct: 99  HHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALT 158

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
           V               GKLF WGD  +G+LG         P+ V     + I  ++CG+ 
Sbjct: 159 VD--------------GKLFMWGDNSEGQLGLEKGTIYCTPQKVD--TGKPIAWISCGYY 202

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +T  G +YT G    G+LG+P   +     P RV G   +  V  V+CG  H  A+
Sbjct: 203 HSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGK--VTMVSCGGEHTIAV 260

Query: 537 TSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           T   +VYT+G G  GQLGHG      + P  VD L  K+++ V CG N TAII
Sbjct: 261 TE-KEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAII 312



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 3/127 (2%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVE 524
           L ++   +++CG + +V +T +G +Y  GS  +GQLGV     +  PT V    +E  V 
Sbjct: 34  LKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVV- 92

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK-QVKRVVCGLN 583
             ACG +H    T   K+Y+ G  + GQLG GD   R S   + F   + ++K++  G N
Sbjct: 93  LAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSN 152

Query: 584 FTAIICL 590
            +A + +
Sbjct: 153 MSAALTV 159



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 11/131 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           + LS  V+  S G  H    +  +V+ +G G   G LG G      +F  +T   +PKAV
Sbjct: 241 LGLSGKVTMVSCGGEHTIAVTEKEVYTFGLG-QFGQLGHG------TFIFETH--IPKAV 291

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGV 296
           ++     +  + CG  H  ++T++G ++++G+   G+LG G E   +   P L       
Sbjct: 292 DALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKF 351

Query: 297 NVELVACGEYH 307
            V+ VACG  H
Sbjct: 352 TVQSVACGGCH 362


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 184/397 (46%), Gaps = 44/397 (11%)

Query: 181 LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           L S V++ + G AH     S G V+ WG G  +G LG G +         TD   P AV 
Sbjct: 313 LPSGVTAIAAGGAHTCALTSSGGVWCWG-GNDSGQLGDGSY---------TDRSTPGAV- 361

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S +   V  IA G  H    T  G ++ WG    G+LG G   D S P  +  L    V 
Sbjct: 362 SGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLP-SGVT 420

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G YHTCA+T S  ++ WGD  Y  G LG G+  +   P  VSG   G+  + I+ G
Sbjct: 421 AIAAGNYHTCALTGSDGVWCWGDNFY--GQLGDGTTTNRSTPGAVSGLPSGV--TAIAAG 476

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +HT  +TS+G ++ +G    G LG G   + S P  V  L     T ++ G +HT A++
Sbjct: 477 NYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGDYHTCALM 535

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                         S G ++ WG  ++G+LG G       P  V  L    +  +A G+ 
Sbjct: 536 --------------SSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGL-PSGVMAIAAGNY 580

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVA 534
            + ALT S  V+  G+ + GQLG    DG       P  V G    S V  +A G YH  
Sbjct: 581 HTCALTGSDGVWCWGTNSDGQLG----DGTTTNRSTPVAVSGL--PSGVTAIAAGNYHTC 634

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           ALTS+  V+ WG   +GQLG G   NR++P  V  L 
Sbjct: 635 ALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP 671



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 172/383 (44%), Gaps = 49/383 (12%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
             S G V+ WG    +G LG G      SF+ ++    P AV   +   V  IA G  H 
Sbjct: 279 LTSSGGVWCWGR-NDSGQLGDG------SFTNRS---TPGAVGG-LPSGVTAIAAGGAHT 327

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
             +T  G ++ WG    G+LG G   D S P  +  L    V  +A G  HTCA T SG 
Sbjct: 328 CALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCARTSSGG 386

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   Y  G LG G+      P  VSG   G+  + I+ G +HT  +T +  ++ +G
Sbjct: 387 VWCWGGNFY--GQLGDGTTTDRSTPGAVSGLPSGV--TAIAAGNYHTCALTGSDGVWCWG 442

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           D  +G LG G   + S P  V  L     T ++ G +HT A+              TS G
Sbjct: 443 DNFYGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGNYHTCAL--------------TSSG 487

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            ++ WG  D G+LG G    R  P  V  L    +  +A G   + AL +SG V+  G  
Sbjct: 488 GVWCWGRNDSGQLGDGTTTNRSTPGAVGGL-PSGVTAIAAGDYHTCALMSSGGVWCWGLN 546

Query: 497 AYGQLG--------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
             GQLG         PVA G +P         S V  +A G YH  ALT +  V+ WG  
Sbjct: 547 NRGQLGDGSYTDSSTPVAVGGLP---------SGVMAIAAGNYHTCALTGSDGVWCWGTN 597

Query: 549 ANGQLGHGDKDNRNSPTLVDFLK 571
           ++GQLG G   NR++P  V  L 
Sbjct: 598 SDGQLGDGTTTNRSTPVAVSGLP 620



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 182/395 (46%), Gaps = 40/395 (10%)

Query: 181 LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           L S V++ + G AH     S G V+ WG  + +G LG G              + P AV 
Sbjct: 160 LPSGVTAIAAGGAHTCALMSSGGVWCWGYNL-SGQLGDGS---------TIYHITPVAV- 208

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S +  +V  IA G  H   +T  G ++ WG+   G+LG G   D S P  +  L    V 
Sbjct: 209 SGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLP-SGVT 267

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +A G  +TCA+T SG ++ WG    +SG LG GS  +   P  V G   G+  + I+ G
Sbjct: 268 AIAAGGRYTCALTSSGGVWCWGR--NDSGQLGDGSFTNRSTPGAVGGLPSGV--TAIAAG 323

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT  +TS+G ++ +G    G LG G +   S P  V  L     T ++ G  HT A  
Sbjct: 324 GAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCA-- 380

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        TS G ++ WG    G+LG G    R  P  V+ L    +  +A G+ 
Sbjct: 381 ------------RTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGL-PSGVTAIAAGNY 427

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIA--ESFVEEVACGAYHVAAL 536
            + ALT S  V+  G   YGQLG    DG    R   G ++   S V  +A G YH  AL
Sbjct: 428 HTCALTGSDGVWCWGDNFYGQLG----DGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCAL 483

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           TS+  V+ WG+  +GQLG G   NR++P  V  L 
Sbjct: 484 TSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP 518



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 179/403 (44%), Gaps = 44/403 (10%)

Query: 167 SNDRSS--AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           + DRS+  A       ++++ + + H  A    D    V+ WG+         G+   G 
Sbjct: 403 TTDRSTPGAVSGLPSGVTAIAAGNYHTCALTGSDG---VWCWGDNFY------GQLGDGT 453

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           + +R T    P AV S +   V  IA G  H   +T  G ++ WG    G+LG G   + 
Sbjct: 454 TTNRST----PGAV-SGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNR 508

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           S P  +  L    V  +A G+YHTCA+  SG ++ WG    N G LG GS      P  V
Sbjct: 509 STPGAVGGLP-SGVTAIAAGDYHTCALMSSGGVWCWG--LNNRGQLGDGSYTDSSTPVAV 565

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            G   G+    I+ G +HT  +T +  ++ +G  S G LG G   + S P  V  L    
Sbjct: 566 GGLPSGVMA--IAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLP-SG 622

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
            T ++ G +HT A+              TS G ++ WG    G+LG G    R  P  V+
Sbjct: 623 VTAIAAGNYHTCAL--------------TSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVS 668

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIA--ES 521
            L    +  +A G + + ALT SG V+  G   YGQLG    DG    R   G ++   S
Sbjct: 669 GL-PSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLG----DGTTTNRSTPGAVSGLPS 723

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
            V  +A G YH  ALT +  V  WG   +GQLG G    R +P
Sbjct: 724 GVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 766



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 147/329 (44%), Gaps = 28/329 (8%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  IA G+ H   +T  GE++ WG    G+LG G   D S P  +  L    V  +A G 
Sbjct: 62  VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP-SGVTAIAAGG 120

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HTCA+T SG +  WG   +  G LG GS      P  VSG   G+  + I+ G  HT  
Sbjct: 121 AHTCALTSSGGVMCWGGNYF--GQLGDGSYTDRSTPVAVSGLPSGV--TAIAAGGAHTCA 176

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           + S+G ++ +G    G LG G  I    P  V  L     T ++ G  HT A+       
Sbjct: 177 LMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLP-SEVTAIAAGYAHTCAL------- 228

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G ++ WGD   G+LG G       P  V  L    +  +A G   + ALT
Sbjct: 229 -------TGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGL-PSGVTAIAAGGRYTCALT 280

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIA--ESFVEEVACGAYHVAALTSTSKV 542
           +SG V+  G    GQLG    DG    R   G +    S V  +A G  H  ALTS+  V
Sbjct: 281 SSGGVWCWGRNDSGQLG----DGSFTNRSTPGAVGGLPSGVTAIAAGGAHTCALTSSGGV 336

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           + WG   +GQLG G   +R++P  V  L 
Sbjct: 337 WCWGGNDSGQLGDGSYTDRSTPGAVSGLP 365



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 134/277 (48%), Gaps = 25/277 (9%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
            V  +A G +HTCA+T SG+++ WG   YN SG LG GS      P  VSG   G+  + 
Sbjct: 61  GVTAIAAGSWHTCALTGSGEVWCWG---YNWSGQLGDGSYTDRSTPVAVSGLPSGV--TA 115

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I+ G  HT  +TS+G +  +G   FG LG G +   S P  V  L     T ++ G  HT
Sbjct: 116 IAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLP-SGVTAIAAGGAHT 174

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A++              S G ++ WG    G+LG G     + P  V+ L  E +  +A
Sbjct: 175 CALM--------------SSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE-VTAIA 219

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            G+  + ALT SG V+  G   +GQLG     D   P  V G    S V  +A G  +  
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGL--PSGVTAIAAGGRYTC 277

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           ALTS+  V+ WG+  +GQLG G   NR++P  V  L 
Sbjct: 278 ALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLP 314



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P AV S +   V  IA G  H   +T  G ++ WG    G+LG G   + S P  +  L 
Sbjct: 613 PVAV-SGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP 671

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              V  +A G+ HTCA+T SG ++ WGD  Y  G LG G+  +   P  VSG   G+  +
Sbjct: 672 -SGVTAIAAGDEHTCALTGSGGVWCWGDNYY--GQLGDGTTTNRSTPGAVSGLPSGV--T 726

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
            I+ G++HT  +T +G +  +G+   G LG G  +  + P +V T
Sbjct: 727 AIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDVVT 771



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 19/184 (10%)

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
           T ++ G WHT A+              T  G+++ WG    G+LG G    R  P  V+ 
Sbjct: 63  TAIAAGSWHTCAL--------------TGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSG 108

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVE 524
           L    +  +A G   + ALT+SG V   G   +GQLG     D   P  V G    S V 
Sbjct: 109 L-PSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGL--PSGVT 165

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            +A G  H  AL S+  V+ WG   +GQLG G      +P  V  L   +V  +  G   
Sbjct: 166 AIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLP-SEVTAIAAGYAH 224

Query: 585 TAII 588
           T  +
Sbjct: 225 TCAL 228



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
           RL     +PL  + +  +A G   + ALT SG V+  G    GQLG     D   P  V 
Sbjct: 50  RLHTSSFSPL--QGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVS 107

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
           G    S V  +A G  H  ALTS+  V  WG    GQLG G   +R++P  V  L     
Sbjct: 108 GL--PSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVT 165

Query: 576 KRVVCGLNFTAII 588
                G +  A++
Sbjct: 166 AIAAGGAHTCALM 178


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG G   S   P  +   LD   + +++CG  H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDYPSLIEA-LDNQEVEFLACGGSHSA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKDGQLGNGGTRDQLIP 339



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 34/335 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G   S   P  +E L       ++CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 255 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYH 532
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V    +E    E       
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKE 360

Query: 533 VAALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTL 566
           +  +   ++ +  W K  N  +       R  PTL
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL----KRTIPTL 391



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 110/210 (52%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 147 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 197

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G      +P LIE L    VE +ACG  H+  
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSAL 257

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 258 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDL 314

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G      IP  V+ 
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLIPLPVKV 344



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E + +P  +  L ++ +  +
Sbjct: 203 SMALSMS--------------GNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFL 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+  + V ++ACG +H 
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELK 351



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 36/226 (15%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+   
Sbjct: 108 HMLILSSDGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL--- 153

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVAC 476
                      +  G+LF WG    G+LG G K    FP    P I E++      Q++ 
Sbjct: 154 -----------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQISA 198

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAA 535
           G   S+AL+ SG++Y+ G   +GQLG+   +    P+ ++  +    VE +ACG  H A 
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEA-LDNQEVEFLACGGSHSAL 257

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LT    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 303



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ + CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACG 251

Query: 582 LNFTAII 588
            + +A++
Sbjct: 252 GSHSALL 258


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 184/401 (45%), Gaps = 44/401 (10%)

Query: 195 EDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGAR 254
           +D   LG VF +G+   +  L G       +F  + DA++             ++ACG +
Sbjct: 13  QDIPELGAVFTFGKSKFSDNLPG-------TFWVKNDAVI-------------SVACGDQ 52

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H+V +T  G  FS+G    G+LGHG    + +P+ ++ L      LVACG  HT   T  
Sbjct: 53  HSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDD 112

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
             +Y +G  + +   LG  S  +     ++   L+G+ +  ++ G  H+  +++ G ++ 
Sbjct: 113 KKVYAFGINSEHQ--LGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYL 170

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G    G LG G      +P +++T    +   +S G +H+A   V TD           
Sbjct: 171 WGSSEHGQLGLGRKKQRKLPVQLKTEG--KAIAISAGAYHSA--YVNTD----------- 215

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G L+T+G+ + G+LG      +       P I   +  VACG   +VALT  G  Y+ G
Sbjct: 216 -GVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFG 274

Query: 495 SAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
             + GQLG+   V     P  +           V+ G  H A L+   ++YT G+G +G+
Sbjct: 275 DGSQGQLGLGQRVTHAGRPHLIQMPTGVKMA-RVSAGQSHTAFLSEGRQMYTCGEGRHGK 333

Query: 553 LGHGDKD---NRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           L   D +   N+ SP LVD L   QV++V CG   T ++ +
Sbjct: 334 LALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLVV 374



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 2/137 (1%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEIL 293
           P  V     L V ++ACG  H V +T  G  +S+G+ S G+LG G R      P LI++ 
Sbjct: 241 PSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMP 299

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +GV +  V+ G+ HT  ++    +YT G+G +    L  G   S      +   L    +
Sbjct: 300 TGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQV 359

Query: 354 SYISCGLWHTAVVTSAG 370
             +SCG  HT V+   G
Sbjct: 360 QQVSCGGCHTLVLVVPG 376


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 149/295 (50%), Gaps = 19/295 (6%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE-YHTCAVTRS 314
           A+ VTK  E+F++G      LG G       P+ IE L    +  +A G   H  A T +
Sbjct: 38  AIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATEN 97

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G++Y+WG   Y    LG+G+     +P +++GNL    +S I+CG  H+ V+T  G +F 
Sbjct: 98  GEIYSWGHNGYCQ--LGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFA 155

Query: 375 FGDGSFGALGHGDHISTSIPREV-ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +G  + G +G G   + S PR+V   L G R   ++CG   + AVV   DS         
Sbjct: 156 WGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVV---DS--------- 203

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G+++ WG    G+LG G+   +  P  V+ L    I Q ACG+  S+AL+  G++YT 
Sbjct: 204 --GEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTW 261

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHV-AALTSTSKVYTWGK 547
           G+ +YGQLG      L      GE    F++  A    H+ AA+T T KVY WG+
Sbjct: 262 GANSYGQLGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ 316



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 27/288 (9%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA-RHAVLVTKQGEIFSWGEES 272
           F  G  H           +L P+ +E      +  +A G+  H V  T+ GEI+SWG   
Sbjct: 48  FAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNG 107

Query: 273 GGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG 331
             +LG+G       P  I   L    +  +ACG +H+  +T  G+++ WG    N G +G
Sbjct: 108 YCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYN--NCGQVG 165

Query: 332 HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
            G+  +   PRKV   L G  +  I+CG   +  V  +G ++ +G    G LG G++++ 
Sbjct: 166 SGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQ 225

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
             P +V +L GL  ++ +CG  H+ A+              +  G ++TWG    G+LG 
Sbjct: 226 PSPCKVSSLNGLIISQAACGYAHSMAL--------------SDEGNIYTWGANSYGQLGT 271

Query: 452 GDKEPRLFPECVAPLIDENI---CQVACGH--DLSVALTTSGHVYTMG 494
           G+K       C A  I E+I     +A  H   +S A+T +G VY  G
Sbjct: 272 GNKANL----CGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 19/220 (8%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATD 423
           VT    +F FG+     LG GD +S+  PR++E L  +G+       G      VV AT+
Sbjct: 41  VTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSG----PHVVAATE 96

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSV 482
           +           G++++WG     +LG+G     L P  +   L    I Q+ACG   S+
Sbjct: 97  N-----------GEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSL 145

Query: 483 ALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            LT  G V+  G    GQ+G    A+   P +V   +    V  +ACG     A+  + +
Sbjct: 146 VLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGE 205

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           VY WG   NGQLG G+  N+ SP  V  L    + +  CG
Sbjct: 206 VYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACG 245



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           VT+  +++ +G+   ++  LG G  +S   PRK+ G       +       H    T  G
Sbjct: 41  VTKDDEVFAFGNN--HNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENG 98

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            ++++G   +  LG+G      +P  +   L   + ++++CG  H+   +V TD      
Sbjct: 99  EIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHS---LVLTDR----- 150

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVALTTSG 488
                 G++F WG  + G++G G       P + V+ L  + +  +ACG   S+A+  SG
Sbjct: 151 ------GEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204

Query: 489 HVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            VY  G    GQLG+    +   P +V   +    + + ACG  H  AL+    +YTWG 
Sbjct: 205 EVYGWGYNGNGQLGLGNNVNQPSPCKVS-SLNGLIISQAACGYAHSMALSDEGNIYTWGA 263

Query: 548 GANGQLGHGDKDN 560
            + GQLG G+K N
Sbjct: 264 NSYGQLGTGNKAN 276



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 25/183 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAVLV 259
           G+VF WG     G +G G            +   P+ V S +    V +IACG   ++ V
Sbjct: 151 GEVFAWGYNNC-GQVGSGA---------TANISTPRKVVSVLGGKRVVSIACGQTSSLAV 200

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              GE++ WG    G+LG G   +   P  +  L+G+ +   ACG  H+ A++  G++YT
Sbjct: 201 VDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYT 260

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSG------NLDGIHLSYISCGLWHTAVVTSAGHLF 373
           WG  +Y  G LG G+K +     K+        ++   H ++IS      A +T  G ++
Sbjct: 261 WGANSY--GQLGTGNKANLCGAAKIGESIGRFIDIAATHYAHIS------AAMTQTGKVY 312

Query: 374 TFG 376
            +G
Sbjct: 313 MWG 315


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 175/379 (46%), Gaps = 41/379 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H+ +VT   +++ +G  + G+LG G +A V+ P  I+ L    V+  ACG  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G++Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 IISTEGGNVYATGGN--NEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  +P +V    G   + +SCG +H+A V +        
Sbjct: 158 DGQLFMWGDNSEGQIGLKDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTID------- 208

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                  G+L+T+G+ + G+LG   +       P+ V+ + D+ + QVACG   ++ LT 
Sbjct: 209 -------GELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDK-VIQVACGGGHTLVLTE 260

Query: 487 SGHVYTMGSAAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
              VY  G   +GQLG+       ++  V   V GE   S    ++CG  H A +T T  
Sbjct: 261 ES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIIS----ISCGENHTAMITDTGG 315

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK------- 592
           +YT+G G +G+LG G ++  NR  PT         V+ V CG     +    +       
Sbjct: 316 IYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFATPQAGMAEEL 375

Query: 593 -WVSSVDHSVCSSCHNPFG 610
            + +++D  + +    PFG
Sbjct: 376 EFEATIDSGLPAPAFRPFG 394



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 39/316 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T+ G +++ G  + G+LG G   E D  H  LI  
Sbjct: 78  PTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFH--LISF 135

Query: 293 LSGVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            +  + ++ ++ G   + A+T  G L+ WGD +   G +G     +  +P +V+    G 
Sbjct: 136 FTSQHKIKQLSAGSNTSAALTEDGQLFMWGDNS--EGQIGLKDVTNVCVPHQVT---IGK 190

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVS 409
            +S+ISCG +H+A VT  G L+TFG+   G LG    + T+  IP+ V ++   +  +V+
Sbjct: 191 PISWISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD-KVIQVA 249

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAP 465
           CG  HT   +V T+ S            ++ +G G  G+LG G     +F    P+ +  
Sbjct: 250 CGGGHT---LVLTEES------------VYAFGLGQFGQLGLGT---FIFETSEPKVLEY 291

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESF 522
           +  E I  ++CG + +  +T +G +YT G   +G+LG+ +    +   PT       +  
Sbjct: 292 VKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCS-VFLKFM 350

Query: 523 VEEVACGAYHVAALTS 538
           V+ VACG  H+    +
Sbjct: 351 VQLVACGGCHMLVFAT 366



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G      T+  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GQLFMWGDN--------SEGQIG--LKDVTNVCVPHQV--TIGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   +   +H  PQL+  +    ++ VACG  HT  +T    +Y
Sbjct: 207 IDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGGHTLVLTEE-SVY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      KV   + G  +  ISCG  HTA++T  G ++TFGDG
Sbjct: 265 AFGLGQF--GQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             V+CG  H   +V AT
Sbjct: 323 RHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCH--MLVFAT 366


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 198/462 (42%), Gaps = 72/462 (15%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++ G  H++++T    +++WG+ + G+LG G       P   + L   +V  V+ GE H+
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHS 132

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T  G ++ WG    +SG LG G+      P +V G      +  ++ G  H+  +TS
Sbjct: 133 LALTDDGRVFAWG--LNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS 190

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G +F +G  S G LG+   + +SIP +V+ L     T V+ G  H+ A+          
Sbjct: 191 DGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA-NVTAVAAGGNHSLAL---------- 239

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-IDENICQVACGHDLSVALTTS 487
               TS G+++ WG    G+LG G       P  VA L        V+ G D S+AL   
Sbjct: 240 ----TSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD 295

Query: 488 GHVYTMGSAAYGQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           G VY  G  +YGQLG    +G      +P +V G    + V  V+ G     ALTS   V
Sbjct: 296 GTVYAWGGNSYGQLG----NGTTTASEMPVQVTG---LANVTAVSAGGSDSLALTSDGYV 348

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVC 602
           Y WG  ++GQLG G   NRN+P            RV   L+  A++         D  + 
Sbjct: 349 YAWGLNSSGQLGDGTTSNRNTPV-----------RVFSVLSTGALLT--------DLQLS 389

Query: 603 SSCHNPF----GFRRKRHNC-------YNCGLVFCKACSSRKSL--------KAALAPSI 643
               NP     GF     +         N  L++ K  +S  ++          +LA  +
Sbjct: 390 DGSSNPIALSPGFTSTVMDYTATVGAGVNQVLLYAKPAASGVTMTLTVNSQSPVSLAAGV 449

Query: 644 NKPYRVCDDCFTKLKKTDTKLKRTSGYTSVVQSPRNRTGNVN 685
            +   +  D    LK T  +    S YT +V   R ++ N N
Sbjct: 450 KQSVALSSDPTNTLKITVIQGSVISTYTIIVN--RAKSSNAN 489



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 10/129 (7%)

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
           L+P   A L +     V+ G   S+ LT+   V+  G    GQLG    DG    R    
Sbjct: 62  LYPASAAVLGE---AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLG----DGTTTGRQTPT 114

Query: 518 IAESF--VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK-DKQ 574
            A+    V +V+ G  H  ALT   +V+ WG  ++GQLG G   +  +P  V  L  D  
Sbjct: 115 PAQGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST 174

Query: 575 VKRVVCGLN 583
           +K V  G N
Sbjct: 175 IKVVAAGGN 183


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 180/362 (49%), Gaps = 35/362 (9%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           ACG RH++L+   G ++S G  S G+LG  R      P  I+ L   ++  V+CG+ H+ 
Sbjct: 43  ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSL 102

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A+ + G +++WG G+     +    K+S  IP+K+   L    +  +SCG +H+  +   
Sbjct: 103 AICKEGRVFSWGSGSDGQLGIREFKKLSS-IPKKID-ELSSFKIIQVSCGHYHSIALAQD 160

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G +F++G  + G LG G+++ S + P+ V++L G+   +V+ G  H+ A+         S
Sbjct: 161 GRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL---------S 211

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHDLSVAL 484
            SG++     + WG  + G+L    K    E    P  +  L    +  ++CG + +  L
Sbjct: 212 FSGTS-----YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVL 266

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALT-STSKV 542
           T  G V+T GS   GQLG  +  G+  P  VD  ++ S   ++ACG+YH  A + +T +V
Sbjct: 267 TQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVSFS---QIACGSYHTLAYSCTTGQV 323

Query: 543 YTWGKGAN----GQLGHGDK-DNRNSPTLV---DFLKDKQVKRVVCGLNFTAIICLHKWV 594
            ++G G+     G L  GD   N N   L+   DF  D QVK +  G N   +  L    
Sbjct: 324 ISFGCGSQRDPIGPLQPGDAVQNFNISNLISSNDF-TDFQVKDIFAGANANFVTTLQDTS 382

Query: 595 SS 596
           SS
Sbjct: 383 SS 384



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 135/273 (49%), Gaps = 38/273 (13%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P  +++    D+ +++CG  H++ + K+G +FSWG  S G+LG      +S  P+ I+ L
Sbjct: 80  PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   +  V+CG YH+ A+ + G +++WG    N G LG G  V      +   +LDGI L
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKN--NHGQLGLGENVPSQASPQWVKSLDGIPL 197

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG------HGDHISTSIPREVETLRGLRTTR 407
           + ++ G  H+  ++ +G  + +G  + G L         + IS   P  +  L+ L+ T 
Sbjct: 198 AQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISK--PFSIGELKRLQVTY 255

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH----GDKEPRLFPECV 463
           +SCG  HTA +              T  GK+FT+G  D G+LG     G K P++    V
Sbjct: 256 ISCGDEHTAVL--------------TQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAV 301

Query: 464 APLIDENICQVACG--HDLSVALTTSGHVYTMG 494
           +        Q+ACG  H L+ + TT G V + G
Sbjct: 302 S------FSQIACGSYHTLAYSCTT-GQVISFG 327



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 45/322 (13%)

Query: 266 FSWGEESGGRLGHG-------------READVSHPQLIEILSGVNVELVACGEYHTCAVT 312
           + WG+ S G+LG               R A + +  L++          ACGE H+  + 
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQ---------AACGERHSLLLL 53

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
             G +  W  G  + G LG         P ++   L+   +  +SCG  H+  +   G +
Sbjct: 54  SDGTV--WSCGNNSCGQLGRKRCQKHGRPAQIQA-LETQDIVSVSCGKEHSLAICKEGRV 110

Query: 373 FTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           F++G GS G LG  +    +SIP++++ L   +  +VSCG +H+ A  +A D        
Sbjct: 111 FSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIA--LAQD-------- 160

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
               G++F+WG  + G+LG G+  P +  P+ V  L    + QVA G   S AL+ SG  
Sbjct: 161 ----GRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTS 216

Query: 491 YTMGSAAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           Y  G    GQL +      A+ +      GE+    V  ++CG  H A LT   KV+T+G
Sbjct: 217 YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFG 276

Query: 547 KGANGQLGHGDKDNRNSPTLVD 568
              +GQLG         P +VD
Sbjct: 277 SNDSGQLGRQLISGMKGPQVVD 298



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 17/236 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG G ++G LG  E +   S        +PK ++   +  +  ++CG  H++ + 
Sbjct: 108 GRVFSWGSG-SDGQLGIREFKKLSS--------IPKKIDELSSFKIIQVSCGHYHSIALA 158

Query: 261 KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G +FSWG+ + G+LG G      + PQ ++ L G+ +  VA G  H+ A++ SG  Y 
Sbjct: 159 QDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYG 218

Query: 320 WGDGTYNSGLLG-HGSKVSC-WIPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           WG    N+G L   G K S   I +  S G L  + ++YISCG  HTAV+T  G +FTFG
Sbjct: 219 WGRN--NAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFG 276

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
               G LG         P+ V++   +  ++++CG +HT A    T    S   GS
Sbjct: 277 SNDSGQLGRQLISGMKGPQVVDS--AVSFSQIACGSYHTLAYSCTTGQVISFGCGS 330



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECV-----APLIDENICQVACGHDLSVALTTSGHVYTM 493
           + WGD   G+LG     PR     V     A L ++ + Q ACG   S+ L + G V++ 
Sbjct: 3   YCWGDNSSGQLGI-PAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61

Query: 494 GSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G+ + GQLG         P ++     +  V  V+CG  H  A+    +V++WG G++GQ
Sbjct: 62  GNNSCGQLGRKRCQKHGRPAQIQALETQDIV-SVSCGKEHSLAICKEGRVFSWGSGSDGQ 120

Query: 553 LGHGDKDNRNS-PTLVDFLKDKQVKRVVCG 581
           LG  +    +S P  +D L   ++ +V CG
Sbjct: 121 LGIREFKKLSSIPKKIDELSSFKIIQVSCG 150



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 491 YTMGSAAYGQLGVPVADGL----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           Y  G  + GQLG+P         V  R    +    + + ACG  H   L S   V++ G
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
             + GQLG         P  +  L+ + +  V CG   +  IC
Sbjct: 63  NNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAIC 105


>gi|118383694|ref|XP_001025001.1| regulator of chromosome condensation protein [Tetrahymena
           thermophila]
 gi|89306768|gb|EAS04756.1| regulator of chromosome condensation protein [Tetrahymena
           thermophila SB210]
          Length = 1447

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 175/398 (43%), Gaps = 53/398 (13%)

Query: 213 GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
           G LG G    G ++      L+PK    +  L +  I+CG  H   VT            
Sbjct: 48  GQLGLGHKYTGKNY------LVPKIC--SYNLVIKQISCGEEHTAFVT--------SSNL 91

Query: 273 GGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL 330
            GRLG  + +    S P L+E L  +    +ACG  HT AV  +G+ Y+WG+G    G+L
Sbjct: 92  KGRLGIDNKQITQSSSPCLVEDLQKLVCCKIACGSNHTVAVMENGEAYSWGNGDL--GVL 149

Query: 331 GHGSKVSCWIPRKVSGNLDGIHLSYI--SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH 388
           G GS+   W P KV G        YI  SCG  HT ++   G +F  G    G L   + 
Sbjct: 150 GIGSQEHTWAPVKVLGQ----KQKYIDVSCGARHTMLLNQYGEVFACGSNEEGQLCLPNS 205

Query: 389 ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
                P +V   + +      CG + T  +              T  G++++ G  + G+
Sbjct: 206 SGELYPSKVRIEKAIEAV---CGHYFTLIL--------------TQLGEIYSCGANNFGQ 248

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG 508
           LG G K      + V  L D+ I +VA GH  S AL   G ++  G+  +G       D 
Sbjct: 249 LGIGHKTSTKELQKVQNLEDQTIIKVAAGHH-SAALNRRGELFIWGTGVFG-------DY 300

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
             PT+   +I   F  +++ G +  +++ +   V+TWG   NG+LG GD++ R +P  V 
Sbjct: 301 PFPTKF-CKIDSPF-NDISVGGFSGSSVDANGVVWTWGSNQNGELGVGDQEPRLNPFPVA 358

Query: 569 FLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCH 606
            LK ++V +V CG+N+   +   K          SS H
Sbjct: 359 ALKGRKVIKVACGINYMVALSAPKSKDLQKQKHQSSAH 396


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 194/435 (44%), Gaps = 85/435 (19%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAV 257
           +  G +  WG   ++G LG   H  G       + L P A+ES  ++ V  +A G  H++
Sbjct: 564 EQTGLILSWGAN-SDGVLG---HTGG------IEQLWPLAIESLSSVQVKMVAAGEFHSL 613

Query: 258 LVTKQGEIFSWGEESGGRLGH--------GREADVSHPQLIEI---LSGVNVELVACGEY 306
            +T+ GE+ S+G    G+ G            A V+ P+ I +   L    V  +A G Y
Sbjct: 614 CLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGY 673

Query: 307 HTCAVTRSGDLYTWG-DGTYNSG-----LLGHG----------SKVSCWIPRKVS-GNLD 349
           H+  VT  G+LYT+G  G +  G      LG G          ++ S + P+      L+
Sbjct: 674 HSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALN 733

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTTRV 408
           G  +  ++CG +H+A VT  G L+T+G G+ G LGHGD    + P+ VE  ++     +V
Sbjct: 734 GQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKV 793

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-------------- 454
           +CG  H+AAV               S G ++T G  + G+LG GD+              
Sbjct: 794 ACGENHSAAV--------------DSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSG 839

Query: 455 ---EPRLFPECVAPLIDENI--CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
              + R+ P  ++ L   ++    +ACGH    A+T  G +YT G      LG P  D  
Sbjct: 840 WSCQERI-PTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG-PSGDVS 897

Query: 510 VPTR---VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN--RNSP 564
            PT    +DG ++      VACG  H AALT   ++Y WG    G+LG G        +P
Sbjct: 898 EPTHLSSIDGVVS------VACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTP 951

Query: 565 TLVDFLKDKQVKRVV 579
            LV    D    R +
Sbjct: 952 KLVPAFADIHQARCL 966



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 146/349 (41%), Gaps = 73/349 (20%)

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           E +A  EY+     ++G + +WG  +   G+LGH   +    P  +  +L  + +  ++ 
Sbjct: 553 EFIA--EYYKNIKEQTGLILSWGANS--DGVLGHTGGIEQLWPLAIE-SLSSVQVKMVAA 607

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGH--------GDHISTSIPREV---ETLRGLRTTR 407
           G +H+  +T  G + +FG    G  G          D  + + PR +   + LR      
Sbjct: 608 GEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVS 667

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH---------------- 451
           ++ G +H+A V              T+ G+L+T+G G + +LGH                
Sbjct: 668 IAAGGYHSALV--------------TADGELYTFGRGGEFQLGHDTVMALGEGGNALHYR 713

Query: 452 -GDKEPRLF---PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVA 506
               +   F   P  ++ L  + + QVACG   S  +T  G +YT G  A GQLG   + 
Sbjct: 714 SNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMT 773

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK-------- 558
           D   P RV+  I +  + +VACG  H AA+ S   +YT G   +GQLG GD+        
Sbjct: 774 DQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGE 833

Query: 559 --------DNRNSPTLVDFLKDKQVKRV--VCGLNFTAII----CLHKW 593
                        PT +  L  + V+ V   CG  F A I     L+ W
Sbjct: 834 GCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTW 882



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 19/117 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+G A G    G            D   P  + S     V ++ACG  HA  +T
Sbjct: 877 GLLYTWGKGTALGLGPSG------------DVSEPTHLSSIDG--VVSVACGDIHAAALT 922

Query: 261 KQGEIFSWGEESGGRLGHGR--EADVSHPQLIEILSGVNVEL---VACGEYHTCAVT 312
            +G+++ WG    GRLG GR  E     P+L+   + ++      V+ G  H  A++
Sbjct: 923 DKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCLGVSIGPRHALAIS 979


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 22/258 (8%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSR 228
           +R  A ET  ++L S     S    H+     G VF WG   + G LG GE +       
Sbjct: 39  ERIPALETLHVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLGIGELK------- 85

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHP 287
                +PK +++   + +  +ACG  H++ +++ G++FSWG+ S G+LG G+E    + P
Sbjct: 86  -ETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASP 144

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL---GHGSKVSCWIPRKV 344
           Q +  L G+ +  VA G  H+ A++ SG  + WG    N+G L   G+ + V  + P  V
Sbjct: 145 QRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN--NAGQLALSGNNAPVQRYKPVLV 202

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
            G L  + + +ISCG  HTAV+T  G +FTFGD S+G LGH        P+ VE + GL 
Sbjct: 203 -GALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGL- 260

Query: 405 TTRVSCGVWHTAAVVVAT 422
            +++ CG +HT A V  T
Sbjct: 261 VSQIDCGSYHTLAYVYTT 278



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 158/304 (51%), Gaps = 26/304 (8%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H++L+   G + S G+ S G+LG         P+ I  L  ++V LV+CG+ H+ AV
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 312 TRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
              G ++ WG  +   G LG G  K + +IP+K+   L  I +  ++CG +H+  ++  G
Sbjct: 63  CHKGRVFAWGAAS--EGQLGIGELKETTFIPKKIK-TLADIKIIQVACGHYHSLALSEDG 119

Query: 371 HLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+         S 
Sbjct: 120 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---------SL 170

Query: 430 SGSTSCGKLFTWGDGDKGRLG-HGDKEP--RLFPECVAPLIDENICQVACGHDLSVALTT 486
           SG++     F WG  + G+L   G+  P  R  P  V  L   ++  ++CG++ +  LT 
Sbjct: 171 SGTS-----FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQ 225

Query: 487 SGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYT 544
            G V+T G  +YGQLG    A+   P  V  E  E  V ++ CG+YH +A + +T +V +
Sbjct: 226 DGKVFTFGDNSYGQLGHDSTAEKRGPQLV--ERIEGLVSQIDCGSYHTLAYVYTTGQVVS 283

Query: 545 WGKG 548
           +G+G
Sbjct: 284 FGRG 287



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 25/284 (8%)

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE+H+  +   G + + GD +   G LG         P ++   L+ +H++ +SCG  H+
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNS--RGQLGRKGTPRGEQPERIPA-LETLHVALVSCGKEHS 59

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             V   G +F +G  S G LG G+   T+ IP++++TL  ++  +V+CG +H+ A+    
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLAL---- 115

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLS 481
                     +  G++F+WG    G+LG G + P +  P+ V  L    + QVA G   S
Sbjct: 116 ----------SEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 165

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAALT 537
            AL+ SG  +  GS   GQL +   +  V    P  V G +    V  ++CG  H A LT
Sbjct: 166 FALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLV-GALKTLSVVFISCGYEHTAVLT 224

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
              KV+T+G  + GQLGH     +  P LV+ + +  V ++ CG
Sbjct: 225 QDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERI-EGLVSQIDCG 267



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 25/235 (10%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H+ ++ S G + + GD S G LG         P  +  L  L    VSCG  H+ AV   
Sbjct: 6   HSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVC-- 63

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDL 480
                         G++F WG   +G+LG G+ KE    P+ +  L D  I QVACGH  
Sbjct: 64  ------------HKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYH 111

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAAL 536
           S+AL+  G V++ G  ++GQLG+       P++   +   S     + +VA G  H  AL
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKE---FPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 168

Query: 537 TSTSKVYTWGKGANGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + +   + WG    GQL   G+     R  P LV  LK   V  + CG   TA++
Sbjct: 169 SLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 11/140 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V +   L V  I+CG  H  ++T+ G++F++G+ S G+LGH   A+   PQL+E + 
Sbjct: 199 PVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIE 258

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDG------TYNSGLLGHGSKVSCWIPRKVSGN 347
           G+ V  + CG YHT A V  +G + ++G G      + +   L   S VSC I    + +
Sbjct: 259 GL-VSQIDCGSYHTLAYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLIS---AND 314

Query: 348 LDGIHLSYISCGLWHTAVVT 367
           L+ + + +I  G +   V T
Sbjct: 315 LEDVQVKHIFAGTYANFVTT 334


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 46/346 (13%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+  WG      +G    A+V  P     L+ + V  +AC E     ++RSG +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYT---Q 476

Query: 324 TYNSGLLGHGSKVSCWIPR---KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
            Y+S  L     V   + R   K++ + DG H  Y++        + + G ++++G G  
Sbjct: 477 AYSSDALAP-QLVQGLVSRNIVKIAAHSDGHH--YLA--------LAATGEVYSWGCGDG 525

Query: 381 GALGHGDHISTSIPREVETL----RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           G LGHGD +    P+ +        G R   ++CG  ++AA+              T+ G
Sbjct: 526 GRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAI--------------TAEG 571

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD--LSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHG  E    P  VA L    +  VACG     ++A+T +G V++ G
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              YG+LG   +DG    ++  ++ +  V +V CG+    ALT   +VY+WGKG N +LG
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKWVSS 596
           HG +++   P L++ L+ K+V  V  G    L  T    +H W S+
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 147/306 (48%), Gaps = 29/306 (9%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +++ S G  +    + G+V+ WG G   G LG G+     +   +   L+          
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCG-DGGRLGHGD-----TVPLEEPKLISAFCGKQAGQ 552

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC- 303
            V +IACG+ ++  +T +GE+++WG  + GRLGHG   D + P L+  L G+ V  VAC 
Sbjct: 553 RVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G+  T AVT +G +++WGDG Y  G LG G    C  P+ V   L  + +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDVVKVRCGSQF 669

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +  +T  G ++++G G    LGHG       P+ +E L+G +   V+ G  H  A+    
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL---- 725

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLID-ENICQVACGHDL 480
                     T   ++ +WG  D+ +  H D      PE  A P +D ++I  +ACG   
Sbjct: 726 ----------TEDSEVHSWGSNDQCQ--HFDTLHATKPEPAALPGLDTKHIVGIACGPAQ 773

Query: 481 SVALTT 486
           S A ++
Sbjct: 774 SFAWSS 779


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG  ++       P+ V P I   + QVACG   +V LT 
Sbjct: 206 ----TTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPV-PGIPGKVVQVACGGGHTVVLTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  ++  I +  +  +ACG  H A +T    +YT
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYT 318

Query: 545 WGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G +++ N   PTL        V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVTV---GKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  +   ++  +P+ V  + G +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 252 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETSVPKAIEHIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVE 524
           D+ I  +ACG + +  +T  G +YT G   +G+LG+ + +     +PT          V+
Sbjct: 294 DQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSN-FLRFIVQ 352

Query: 525 EVACGAYHVAALTS 538
            V+CG  H     +
Sbjct: 353 LVSCGGCHTLVFAT 366



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + + +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR-VSCGVWHTAAV 418
             HT V T  G ++  G  + G LG GD    S    +      R  + +S G   +AA+
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+
Sbjct: 156 --------------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGY 199

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +TT G +YT G    G+LG+P   + +  +P  V G   +  V +VACG  H   
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVV 257

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           LT  + VYT+G G  GQLG G      S P  ++ +KD+++  + CG N TA+I
Sbjct: 258 LTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 24/227 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +G+++++GE   G+LG   +  V+H  PQ +  + G  V+ VACG  HT  +T    +Y
Sbjct: 207 TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEKA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           T+G G +  G LG G+ +    +P+ +  ++    +S+I+CG  HTA++T  G ++TFGD
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFGD 321

Query: 378 GSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           G  G LG G   ST+  IP             VSCG  HT  +V AT
Sbjct: 322 GRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT--LVFAT 366


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ V+ P  ++ L    V+  ACG  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y    G  N G LG G          +S       +  +S G   +A +T 
Sbjct: 90  LVSTEGGKVYA--SGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTE 147

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 148 DGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 195

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG   +       P+ V P I E + QVACG   +V LT 
Sbjct: 196 ----TTEGELYTFGEPESGKLGLPKQLLVNHRMPQSV-PGIPEKVVQVACGGGHTVVLTE 250

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  ++  I +  +  + CG  H A +T    +YT
Sbjct: 251 KA-VYTFGLGQFGQLGLGTFLFETPVPKVIE-HIKDLKISSIFCGENHTALITDLGLMYT 308

Query: 545 WGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G ++  N+ +PTL        V+ V CG
Sbjct: 309 FGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 25/293 (8%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + + +CG
Sbjct: 29  FLSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKSTVNKPTCVKA-LKPEKVKFAACG 85

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT V T  G ++  G  + G LG GD                R +      + +   +
Sbjct: 86  RNHTLVSTEGGKVYASGGNNEGQLGLGDTDE-------------RNSFHLISFFTSQRKI 132

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               + S++ +  T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+ 
Sbjct: 133 KQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVT--VGKPISWISCGYY 190

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +TT G +YT G    G+LG+P   + +  +P  V G I E  V+ VACG  H   L
Sbjct: 191 HSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVVL 248

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T  + VYT+G G  GQLG G        P +++ +KD ++  + CG N TA+I
Sbjct: 249 TEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 300



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + +   LI    
Sbjct: 68  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFT 127

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 128 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLKNITNVCVPQQVT---VGKPI 182

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG      ++  +P+ V  +   +  +V+CG
Sbjct: 183 SWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPE-KVVQVACG 241

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 242 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETPVPKVIEHIK 283

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D  I  + CG + +  +T  G +YT G   +G+LG+ +    +   PT          V+
Sbjct: 284 DLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSN-FLRFIVQ 342

Query: 525 EVACGAYHVAALTS 538
            VACG  H     +
Sbjct: 343 LVACGGCHTLVFAT 356



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 149 GELFMWGDN--------SEGQIG--LKNITNVCVPQQV--TVGKPISWISCGYYHSAFVT 196

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG  ++  V+H ++ + + G+   V  VACG  HT  +T    +Y
Sbjct: 197 TEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTEKA-VY 254

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  ++  + +S I CG  HTA++T  G ++TFGDG
Sbjct: 255 TFGLGQF--GQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDG 312

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             V+CG  HT  +V AT
Sbjct: 313 RHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHT--LVFAT 356


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 136/280 (48%), Gaps = 25/280 (8%)

Query: 318 YTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +T G G  NSG LG G        +PR +   L+GI +  I+ G  HT V+TS G + + 
Sbjct: 17  WTLGFGNTNSGELGLGGIEDHIVRVPRSIP-QLEGIRVRQIATGAHHTLVLTSHGRVLSC 75

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G      LG    +ST+ P  V  L+ LR  +V CG  H+ A+              T  
Sbjct: 76  GSNDHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMAL--------------TEA 119

Query: 436 GKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
           G+++ WG   KG+LG+G+ +E RL P  V  L    + Q+ACG +  +AL  +G +Y  G
Sbjct: 120 GQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWG 179

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF---VEEVACGAYHVAALTSTSKVYTWGKGANG 551
               GQLG+       P RV  E+       + ++ACGA H   L+ +  ++ WG    G
Sbjct: 180 DNGNGQLGIGTVGE--PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFG 237

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           QLG  D  +R  PTL+  L+ + VK +  G   +A +  H
Sbjct: 238 QLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAH 277



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 40/321 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P+ V +   L +  + CG +H++ +T+ G+++ WG  S G+LG+G  +E+ +S P+ ++ 
Sbjct: 92  PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLS-PRFVKT 150

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGD---GTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           L+   V  +ACG  H  A+  +G LY WGD   G    G +G   +V    P +V+ NL 
Sbjct: 151 LAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRV----PVEVT-NLL 205

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G+ LS I+CG  H+ V++ +G +F +G   FG LG  D+   + P  ++TLR      ++
Sbjct: 206 GLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIA 265

Query: 410 CGVWHTAA-------------------VVVATDSSSSSPSGSTSCGKLFTWGD------- 443
            G  H+AA                   V ++   + S+P  S    KLF+  +       
Sbjct: 266 AGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQ-SALARKLFSLIEREFCRHS 324

Query: 444 -GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT-TSGHVYTMGSAAYGQL 501
            G  G+LGHG K  +L P  +  L+   I Q+A G   +V    T G V+T G    GQL
Sbjct: 325 YGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQL 384

Query: 502 GVPVADGLVPTRVDGEIAESF 522
           G  V+    PT + G   +S 
Sbjct: 385 GSSVSMVSTPTPLAGNWGKSL 405



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 155/364 (42%), Gaps = 62/364 (17%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +P+++     + V  IA GA H +++T  G + S G     +LG  +E   + P+ +  L
Sbjct: 41  VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLG--QEVSTTKPEPVTAL 98

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + +  V CG+ H+ A+T +G +Y WG  +   G LG+G      +  +    L    +
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWGSNS--KGQLGNGEGQESRLSPRFVKTLAPFTV 156

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGV 412
             I+CG  H   + + G L+ +GD   G LG G       +P EV  L GL  ++++CG 
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGA 216

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+  +              +  G +F WG    G+LG  D + R FP  +  L  +++ 
Sbjct: 217 NHSMVL--------------SKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVK 262

Query: 473 QVACGHDLSVALTTSGHVYTMG-------------------------------------- 494
            +A G   S ALT  G V+T G                                      
Sbjct: 263 FIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCR 322

Query: 495 --SAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVYTWGKGAN 550
               +YGQLG     D L P ++  E+  + + ++A G  H      T  KV+T+G G N
Sbjct: 323 HSYGSYGQLGHGSKNDQLTPMKIQ-ELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGN 381

Query: 551 GQLG 554
           GQLG
Sbjct: 382 GQLG 385



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 72/294 (24%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V++WG   + G LG GE         Q   L P+ V++     V  IACG+ H + + 
Sbjct: 120 GQVYMWGSN-SKGQLGNGEG--------QESRLSPRFVKTLAPFTVVQIACGSNHCLALL 170

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEI----LSGVNVELVACGEYHTCAVTRSGD 316
             G +++WG+   G+LG G    V  PQ + +    L G+ +  +ACG  H+  +++SG 
Sbjct: 171 NNGALYAWGDNGNGQLGIG---TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGV 227

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           ++ WG   +  G LG         P  +   L   H+ +I+ G  H+A +T+ G +FTFG
Sbjct: 228 IFVWGSNRF--GQLGLSDNKDRAFPTLLK-TLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284

Query: 377 ----------------------------------------DGSFGALGHGDHISTSIPRE 396
                                                    GS+G LGHG       P +
Sbjct: 285 WSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMK 344

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
           ++ L G   T+++ G  HT                + + GK+FT+G G  G+LG
Sbjct: 345 IQELMGTTITQIALGRCHTVCY-------------APTVGKVFTFGLGGNGQLG 385


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 161/345 (46%), Gaps = 39/345 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H  ++T   +++ +G  + G+LG G  + VS P  ++ L    V+  ACG  HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             +T  G +Y  G    N G LG G          +        L  +S G   +A +T 
Sbjct: 145 LVLTEEGKVYAAGGN--NEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTV 202

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G+LF +GD S G +G  +  +  +P +V    G     +SCG +H+A V +        
Sbjct: 203 DGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTME------- 253

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF------PECVAPLIDENICQVACGHDLSV 482
                  G+L+T+G+ + G+LG     PR        P+ V P I E + QVACG   +V
Sbjct: 254 -------GELYTFGETECGKLGL----PRQLLMNHKVPQLV-PGIPEKVIQVACGGGHTV 301

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE----VACGAYHVAALTS 538
            LT    VYT G   +GQLG+      +    + +I E   ++    ++CG  H A +T 
Sbjct: 302 VLTEKA-VYTFGLGQFGQLGLGT---FIFETAEPKILEPIKDQKIIYISCGENHTALITD 357

Query: 539 TSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
              +YT+G G +G+LG G ++  N+  PTL        V+ V CG
Sbjct: 358 VGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACG 402



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS--HPQLIEI 292
           P  V++     V   ACG  H +++T++G++++ G  + G+LG G   D +  HP +   
Sbjct: 123 PTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHP-ICFF 181

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P +V+    G  
Sbjct: 182 TSQHQLKQLSAGSNTSAALTVDGNLFMWGDNS--EGQIGLKNVPNVCVPHQVTV---GKP 236

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI--STSIPREVETLRGLRTTRVSC 410
           +++ISCG +H+A VT  G L+TFG+   G LG    +  +  +P+ V  +   +  +V+C
Sbjct: 237 IAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPE-KVIQVAC 295

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+ +            ++T+G G  G+LG G     +F    P+ + P+
Sbjct: 296 GGGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FIFETAEPKILEPI 337

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT          V
Sbjct: 338 KDQKIIYISCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSN-FLRFMV 396

Query: 524 EEVACGAYHVAALTS 538
           E VACG  H+    +
Sbjct: 397 ELVACGGCHMIVFAT 411



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +ACG+ HT  +T +  LY +G  + N G LG GS+ +   P  V   L    + + +CG 
Sbjct: 85  LACGDEHTAIITGNNKLYMFG--SNNWGQLGLGSRSTVSKPTCVKA-LKPEKVKFAACGR 141

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V+T  G ++  G  + G LG GD                R T      + +   + 
Sbjct: 142 NHTLVLTEEGKVYAAGGNNEGQLGLGDTED-------------RNTFHPICFFTSQHQLK 188

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G LF WGD  +G++G  +      P  V   + + I  ++CG+  
Sbjct: 189 QLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVT--VGKPIAWISCGYYH 246

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+P   + +  VP  V G I E  ++ VACG  H   LT
Sbjct: 247 SAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPG-IPEKVIQ-VACGGGHTVVLT 304

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      + P +++ +KD+++  + CG N TA+I
Sbjct: 305 EKA-VYTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALI 355


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 26/320 (8%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG         P+ I+ L  
Sbjct: 15  RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLS 354
           +NV+LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + P+K++  L+GI + 
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKIT-TLNGIKII 131

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVW 413
            +SCG +H+  ++    +F++G  S G LG G    S + P+ V +L G+   +V+ G  
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDEN 470
           H+ A+ +              CG  F WG    G+L    +   +    P  V  L +  
Sbjct: 192 HSFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACG 529
           +  ++CG + +  LT  G V+T G    GQLG  P  +   P  V  EI +  V +V CG
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLV--EIIDGLVSQVDCG 295

Query: 530 AYH-VAALTSTSKVYTWGKG 548
           +YH +A + +T +V ++G G
Sbjct: 296 SYHTLAYVHTTGQVVSFGHG 315



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 22/266 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V  +ID 
Sbjct: 243 CGAEHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-IIDG 287

Query: 470 NICQVACGHDLSVALT-TSGHVYTMG 494
            + QV CG   ++A   T+G V + G
Sbjct: 288 LVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+       
Sbjct: 110 GELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEF 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  V  LK+  V  + CG   TA++
Sbjct: 227 PLSVGALKNLGVVYISCGAEHTAVL 251



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 21/196 (10%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P +V
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSV 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CGA H  ++T+ G++F++G+   G+LG+    +   PQL+EI+ G+ V
Sbjct: 231 GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGNLDGI 351
             V CG YHT A V  +G + ++G G  ++G   H         +SC I    + +L G+
Sbjct: 290 SQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTENFDISCLIS---AEDLVGV 346

Query: 352 HLSYISCGLWHTAVVT 367
            + +I  G +   V T
Sbjct: 347 QVKHIFAGTYANFVTT 362


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG  ++       P+ V P I   + QVACG   +V LT 
Sbjct: 206 ----TTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPV-PGIPGKVVQVACGGGHTVVLTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  ++  I +  +  +ACG  H A +T    +YT
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYT 318

Query: 545 WGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G +++ N   PTL        V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVT---VGKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  +   ++  +P+ V  + G +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 252 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETSVPKAIEHIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVE 524
           D+ I  +ACG + +  +T  G +YT G   +G+LG+ + +     +PT          V+
Sbjct: 294 DQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSN-FLRFIVQ 352

Query: 525 EVACGAYHVAALTS 538
            V+CG  H     +
Sbjct: 353 LVSCGGCHTLVFAT 366



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + + +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR-VSCGVWHTAAV 418
             HT V T  G ++  G  + G LG GD    S    +      R  + +S G   +AA+
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+
Sbjct: 156 --------------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGY 199

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +TT G +YT G    G+LG+P   + +  +P  V G   +  V +VACG  H   
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVV 257

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           LT  + VYT+G G  GQLG G      S P  ++ +KD+++  + CG N TA+I
Sbjct: 258 LTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 24/227 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +G+++++GE   G+LG   +  V+H  PQ +  + G  V+ VACG  HT  +T    +Y
Sbjct: 207 TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEKA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           T+G G +  G LG G+ +    +P+ +  ++    +S+I+CG  HTA++T  G ++TFGD
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFGD 321

Query: 378 GSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           G  G LG G   ST+  IP             VSCG  HT  +V AT
Sbjct: 322 GRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT--LVFAT 366


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 171/357 (47%), Gaps = 46/357 (12%)

Query: 234 LPKAVESTMALDVHNIACGARHAV-LVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           +P  V       ++NI+ G  H+    T+  +++ WG    G+LG+    D+ +P++   
Sbjct: 81  IPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNG 140

Query: 293 L---SGVNVEL--VACGEYHTCAVTRS---------GDLYTWGDGT-----YNSGLLGHG 333
           L    G+  E+  ++CGE HT AV +            LY WG  +      ++G   + 
Sbjct: 141 LKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYV 200

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH-GDHISTS 392
           ++     P    GN++ +     +C  + T  +   G +F++G G F  LG+  + ++  
Sbjct: 201 NQPLEMSPDYWEGNVESVK----ACSDF-TIAIDKQGRIFSWGKGGFNRLGYKAEIVNQK 255

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P ++E+L   +  + S G +H+AA+              T+ G+L+TWG    G+LGHG
Sbjct: 256 HPLQIESLSKQQIIQFSLGSFHSAAI--------------TNNGRLYTWGRDSNGQLGHG 301

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-- 510
             +  +FP+ V  L +  I  VACG   ++AL+ +  +++ G  + GQLG   ++ L   
Sbjct: 302 QAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLG-RASENLKSS 360

Query: 511 -PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTL 566
            P ++     +  ++++ACG+ H   L     VY+WG    GQLG  D+D+    T+
Sbjct: 361 DPKKISF-FEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGF-DQDSNAQNTI 415



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 166/367 (45%), Gaps = 54/367 (14%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-------ADVSHPQLIEI------LSG 295
           I CGA H+  +    E+++WG   G +LG   E       AD+  P+ I+I      LS 
Sbjct: 33  IVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADI--PEQIKIPVKVTELSN 90

Query: 296 VNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG--NLDGIH 352
             +  ++ G  H+ A  T    +Y WG G Y  G LG+        P   +G    +GI 
Sbjct: 91  KKINNISTGTNHSFAWSTELNQVYCWGIGEY--GKLGNKESKDLQYPEIFNGLKQPEGIQ 148

Query: 353 --LSYISCGLWHTAVVT---------SAGHLFTFGDGSFGALG----HGDHISTSIPREV 397
             +S ISCG  HT  V          S   L+ +G  S   LG      D+++  +    
Sbjct: 149 WEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSP 208

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH-GDKEP 456
           +   G   +  +C     +   +A D            G++F+WG G   RLG+  +   
Sbjct: 209 DYWEGNVESVKAC-----SDFTIAIDKQ----------GRIFSWGKGGFNRLGYKAEIVN 253

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVD 515
           +  P  +  L  + I Q + G   S A+T +G +YT G  + GQLG   A   + P  V 
Sbjct: 254 QKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQ 313

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQ 574
             +  +++  VACG  H  AL+  +++++WG  ++GQLG   ++ ++S P  + F +DK 
Sbjct: 314 A-LQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKS 372

Query: 575 VKRVVCG 581
           +K++ CG
Sbjct: 373 IKQIACG 379



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 37/322 (11%)

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG----------DGTYNSGLLGHG 333
           V  P LI  +S  N+  + CG  H+ A+  + ++Y WG          D  YN  +    
Sbjct: 18  VQTPHLISDIS--NIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQ-IFQAD 74

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTS 392
                 IP KV+  L    ++ IS G  H+ A  T    ++ +G G +G LG+ +     
Sbjct: 75  IPEQIKIPVKVT-ELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQ 133

Query: 393 IPREVETLRGLR--------TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            P   E   GL+         + +SCG  HT AV+   + ++S      S  KL+ WG  
Sbjct: 134 YP---EIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQ-----SQNKLYVWGSS 185

Query: 445 DKGRLG--HGDKEPRLFPECVAPLIDE-NICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
              +LG   G  +    P  ++P   E N+  V    D ++A+   G +++ G   + +L
Sbjct: 186 SDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKACSDFTIAIDKQGRIFSWGKGGFNRL 245

Query: 502 G--VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           G    + +   P +++  +++  + + + G++H AA+T+  ++YTWG+ +NGQLGHG   
Sbjct: 246 GYKAEIVNQKHPLQIES-LSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAK 304

Query: 560 NRNSPTLVDFLKDKQVKRVVCG 581
               P  V  L++  +  V CG
Sbjct: 305 ADIFPKEVQALQNTYIVSVACG 326



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 15/190 (7%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            D  G +F WG+G        G +R+GY  +   +   P  +ES     +   + G+ H+
Sbjct: 228 IDKQGRIFSWGKG--------GFNRLGYK-AEIVNQKHPLQIESLSKQQIIQFSLGSFHS 278

Query: 257 VLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
             +T  G +++WG +S G+LGHG+ +AD+  P+ ++ L    +  VACGE HT A++++ 
Sbjct: 279 AAITNNGRLYTWGRDSNGQLGHGQAKADI-FPKEVQALQNTYIVSVACGEGHTLALSKNN 337

Query: 316 DLYTWGDGTYNSGLLGHGSK-VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           +L++WG  +  SG LG  S+ +    P+K+S   +   +  I+CG  H+ V+   G +++
Sbjct: 338 ELFSWGLNS--SGQLGRASENLKSSDPKKISF-FEDKSIKQIACGSKHSLVLLQDGTVYS 394

Query: 375 FGDGSFGALG 384
           +G   +G LG
Sbjct: 395 WGSNQYGQLG 404


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 26/320 (8%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RH++L+     + S G+ S G+LG         P+ I+ L  
Sbjct: 15  RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALET 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLS 354
           +NV+LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + P+K++  L+GI + 
Sbjct: 75  LNVDLVSCGKEHSLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKIT-TLNGIKII 131

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVW 413
            +SCG +H+  ++    +F++G  S G LG G    S + P+ V +L G+   +V+ G  
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDEN 470
           H+ A+ +              CG  F WG    G+L    +   +    P  V  L +  
Sbjct: 192 HSFALSL--------------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACG 529
           +  ++CG + +  LT  G V+T G    GQLG  P  +   P  V  EI +  V +V CG
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLV--EIIDGLVSQVDCG 295

Query: 530 AYH-VAALTSTSKVYTWGKG 548
           +YH +A + +T +V ++G G
Sbjct: 296 SYHTLAYVHTTGQVVSFGHG 315



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 22/266 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L+V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V  +ID 
Sbjct: 243 CGAEHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-IIDG 287

Query: 470 NICQVACGHDLSVALT-TSGHVYTMG 494
            + QV CG   ++A   T+G V + G
Sbjct: 288 LVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLNVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+       
Sbjct: 110 GELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEF 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  V  LK+  V  + CG   TA++
Sbjct: 227 PLSVGALKNLGVVYISCGAEHTAVL 251



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 21/196 (10%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P +V
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSV 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CGA H  ++T+ G++F++G+   G+LG+    +   PQL+EI+ G+ V
Sbjct: 231 GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGNLDGI 351
             V CG YHT A V  +G + ++G G  ++G   H         +SC I    + +L G+
Sbjct: 290 SQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTENFDISCLIS---AEDLVGV 346

Query: 352 HLSYISCGLWHTAVVT 367
            + +I  G +   V T
Sbjct: 347 QVKHIFAGTYANFVTT 362


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCS-NFLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E LSG+ +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG     S   P  +   LD   + +++CG  HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKNEF--GQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 29/279 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L GI L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLSGIPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG     S   P  +E L   +   ++CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G LFT+G G  G+LGH   +  L P  VA L    + Q+
Sbjct: 255 TALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVP 511
           ACG   ++A  +  G V++ GS   GQLG     D L+P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 13/195 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLSGIPLAQISAGEAHSMALS 207

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+SWG+   G+LG         P LIE L    VE +ACG  HT  +T+ G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  G +F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 380 FGALGHGDHISTSIP 394
            G LG+G      IP
Sbjct: 325 EGQLGNGGTRDQLIP 339



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG    E +  P  +  L ++ +  +
Sbjct: 203 SMALSMS--------------GNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFL 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT  G ++T G+  +GQLG     + L P  V  E+A + V ++ACG +H 
Sbjct: 249 ACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELAGNRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S   KV+++G G  GQLG+G   ++  P
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 34/225 (15%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H  +++S G  F + + S   L           R    L+  +  +++CG +H+ A+   
Sbjct: 108 HMLILSSGGKPFEYDNYSMKHL-----------RFESILQEKKIIQITCGDYHSLAL--- 153

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI-----CQVAC 476
                      +  G+LF WG    G+LG G K    FP    P I E++      Q++ 
Sbjct: 154 -----------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLSGIPLAQISA 198

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           G   S+AL+ SG++Y+ G   +GQLG+   +      +   +    VE +ACG  H A L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           T    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACG 303



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLSGI 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG    ++++SP+L++ L +++V+ + CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACG 251

Query: 582 LNFTAII 588
            + TA++
Sbjct: 252 GSHTALL 258


>gi|302854088|ref|XP_002958555.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
 gi|300256130|gb|EFJ40404.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
          Length = 201

 Score =  138 bits (347), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 101/186 (54%), Gaps = 7/186 (3%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           V   +++DV  +AC  RHA L+T+ GE+++WG    G LGHG   DV  P+L+  + G  
Sbjct: 3   VGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRG 62

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV--SGNLDGIHLSY 355
           V  VACGE  + A++    L+ WG G   +G LG+G    C  P  V   G  D + +  
Sbjct: 63  VRAVACGEGASAAISAEQRLFMWGKGI--AGQLGNGYAFPCAEPAPVIFPGLRDDVKVLA 120

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE---TLRGLRTTRVSCGV 412
           +SCG +HTA +T  G L+T+G+G FG LGHG       PR       L       VSCG 
Sbjct: 121 VSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGY 180

Query: 413 WHTAAV 418
           WHTAAV
Sbjct: 181 WHTAAV 186



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 22/199 (11%)

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
            E   + +S V  +  H +        G+++ WG G  +G LG G            D  
Sbjct: 4   GEAISVDVSRVACAPRHAAL---ITRNGELYTWGVG-KDGNLGHG---------WCGDVP 50

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            P+ +       V  +ACG   +  ++ +  +F WG+   G+LG+G     + P  + I 
Sbjct: 51  KPRLLTRMGGRGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPV-IF 109

Query: 294 SG----VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN-- 347
            G    V V  V+CG YHT A+T  G LYTWG+G +  G LGHG++   + PR+ +G+  
Sbjct: 110 PGLRDDVKVLAVSCGPYHTAAITEGGLLYTWGNGLF--GRLGHGTQRDEYRPRRCAGSFP 167

Query: 348 LDGIHLSYISCGLWHTAVV 366
           L+  ++  +SCG WHTA V
Sbjct: 168 LEDKYVINVSCGYWHTAAV 186



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 63/190 (33%), Positives = 85/190 (44%), Gaps = 22/190 (11%)

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
           +RV+C   H A +              T  G+L+TWG G  G LGHG       P  +  
Sbjct: 12  SRVACAPRHAALI--------------TRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTR 57

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAES 521
           +    +  VACG   S A++    ++  G    GQLG     P A+   P    G   + 
Sbjct: 58  MGGRGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEP-APVIFPGLRDDV 116

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV--DF-LKDKQVKRV 578
            V  V+CG YH AA+T    +YTWG G  G+LGHG + +   P      F L+DK V  V
Sbjct: 117 KVLAVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINV 176

Query: 579 VCGLNFTAII 588
            CG   TA +
Sbjct: 177 SCGYWHTAAV 186



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 14/116 (12%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSF--SRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           +F+WG+GIA G LG G     Y+F  +     + P   +    L V   +CG  H   +T
Sbjct: 82  LFMWGKGIA-GQLGNG-----YAFPCAEPAPVIFPGLRDDVKVLAV---SCGPYHTAAIT 132

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIE---ILSGVNVELVACGEYHTCAVTR 313
           + G +++WG    GRLGHG + D   P+       L    V  V+CG +HT AV R
Sbjct: 133 EGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAVAR 188



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
           V   I  ++ +VAC    +  +T +G +YT G    G LG      +   R+   +    
Sbjct: 3   VGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRG 62

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF--LKDK-QVKRVV 579
           V  VACG    AA+++  +++ WGKG  GQLG+G       P  V F  L+D  +V  V 
Sbjct: 63  VRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVS 122

Query: 580 CGLNFTAIIC----LHKW 593
           CG   TA I     L+ W
Sbjct: 123 CGPYHTAAITEGGLLYTW 140


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 178/390 (45%), Gaps = 39/390 (10%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           G  H    S   V+  G G+  G LG G E     +F+R     L + V  + + +    
Sbjct: 119 GKYHTLLISNSSVYSCGSGLC-GVLGQGSETTQCVAFTRIDFPPLARVVHVSASFN---- 173

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEILSGVNVELVACGEYH 307
                HA  V + GE+F+ G+ S    GH R+    +  P+L+E L G+  + VA G   
Sbjct: 174 -----HAAFVMQSGEVFTCGDNSSSCCGH-RDTTRPIFKPRLVESLKGIPCKQVAAGLNF 227

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  +TR G +YT G  T+  G LGHG       P+ +      +    I+ G  +   VT
Sbjct: 228 TVFLTRKGHVYTCGTNTH--GQLGHGDTQDRPTPKMIEVLSSVVQ---IAAGPSYILSVT 282

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSS 425
             G +++FG G+   LGHG+      PR ++  R  G+   RVS G  H     VA DS+
Sbjct: 283 ENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHA----VALDSN 338

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G ++TWG G  G LGHGD+  +  PE +  L ++ + QV      +  L 
Sbjct: 339 ----------GYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLV 388

Query: 486 TSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
            SG VY  GS  +G LG     V+  ++  R+   +    V +++ G YH   +TS  ++
Sbjct: 389 DSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQI 448

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           + +G     QLGH    +   PT + F+KD
Sbjct: 449 FGFGDNERAQLGHDILRSCLEPTEI-FIKD 477



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 24/294 (8%)

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           Q++E  SG N+++   G+YHT  ++ S  +Y+ G G    G+LG GS+ +  +       
Sbjct: 105 QMVETSSG-NMQITT-GKYHTLLISNS-SVYSCGSGL--CGVLGQGSETTQCVAFTRIDF 159

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTT 406
                + ++S    H A V  +G +FT GD S    GH D       PR VE+L+G+   
Sbjct: 160 PPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCK 219

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +V+ G+  T  +              T  G ++T G    G+LGHGD + R  P+ +  L
Sbjct: 220 QVAAGLNFTVFL--------------TRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESF-VE 524
              ++ Q+A G    +++T +G VY+ GS A   LG     D L P  +     +   + 
Sbjct: 266 --SSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIV 323

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            V+ G  H  AL S   VYTWGKG  G LGHGD+  + +P L+  LK++ V +V
Sbjct: 324 RVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 21/178 (11%)

Query: 173 AAETFR---ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           A + FR   I +  V +   H  A    DS G V+ WG+G   G LG G+         +
Sbjct: 311 AIQKFRRKGIHIVRVSAGDEHAVA---LDSNGYVYTWGKGYC-GALGHGD---------E 357

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            +   P+ + S     V  +    R   ++   G ++ +G    G LG         V  
Sbjct: 358 IEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLK 417

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P++++ L   +V  ++ G YHT  +T  G ++ +GD       LGH    SC  P ++
Sbjct: 418 PRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDN--ERAQLGHDILRSCLEPTEI 473


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 194/416 (46%), Gaps = 58/416 (13%)

Query: 182 SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           SSV  +SS   + E       ++ WG    N F   G+  +G S S+ +  L+P      
Sbjct: 17  SSVTFTSSFVFSQEQ------LYAWG---WNNF---GQLGIGNSISQYSPQLVP------ 58

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
              DV  +AC +  +  + K G++++WG    G LG+G+  +++ P L++ L  ++ + V
Sbjct: 59  -IQDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFV 117

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK----VSGNL------DGI 351
           ACG YH  A+T  G LYTWG+  ++ G LGH    S  +P +       NL      + +
Sbjct: 118 ACGNYHMAAITTDGQLYTWGN--FDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELV 175

Query: 352 HLSY----ISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTT 406
            L++    ++ G   T +++  G++++ G    G LG+   ++     +++  L+     
Sbjct: 176 QLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLKN---- 231

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
                       +V  DS +       S G +F WG    G+LG         P+ +  L
Sbjct: 232 ------------IVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGL 279

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
               I Q +CG     AL+T G +YT G    GQLG P     +PT    +  ++ +++V
Sbjct: 280 --PKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQD-IPTPHKIQFDQN-IDKV 335

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTLVDFLKDKQVKRVVCG 581
           +CG  HV  + S +K+Y  G+G  GQLG G + ++ NS      L  + V ++ CG
Sbjct: 336 SCGQAHV-GIVSKNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVMENVIKIACG 390



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 26/255 (10%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           A LP+ V+  +   V  +A G +  +++++ G ++S G    G LG+ +  +V  P   +
Sbjct: 169 AKLPELVQ--LNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGY-QTKNVDEPTFKQ 225

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
           I    N+  +  G   + A+   G+++ WG   +  G LG  S      P+++ G     
Sbjct: 226 IPDLKNIVQIDSGTDFSVALDSDGNMFAWGSNYF--GQLGTPSPSVVQTPQQIKGL---P 280

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +   SCG      +++ G L+T+G G  G LG         P +++  + +   +VSCG
Sbjct: 281 KIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQDIPTPHKIQFDQNI--DKVSCG 338

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-IDEN 470
             H   V               S  KL+  G G +G+LG G +         +PL + EN
Sbjct: 339 QAHVGIV---------------SKNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVMEN 383

Query: 471 ICQVACGHDLSVALT 485
           + ++ACG   S A+ 
Sbjct: 384 VIKIACGGSHSFAVV 398


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 37/344 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +  ++ P  ++ L    V+ VACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G++Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEEGNVYATGGN--NDGQLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P +V    G   + +SCG +H+A V          
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVCVPHQVTI--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHDLSV 482
               T  G+L+T+G+ + G+LG  +      K P+L        I E + QVACG   +V
Sbjct: 206 ----TMDGELYTFGECENGKLGLPEELLINHKTPQLVTR-----IPEKVIQVACGGGHTV 256

Query: 483 ALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
            LT +  VYT G   +GQLG+   + +   P  ++  I +  +  ++CG  H A +T   
Sbjct: 257 VLTET-IVYTFGLGQFGQLGLGTFIFETSEPKAIE-YIKDHKISSISCGENHTALITELG 314

Query: 541 KVYTWGKGANGQLGHGDKD--NRNSPTL-VDFLKDKQVKRVVCG 581
           ++YT+G G  G+LG G ++  N+  PTL  DFL+   ++ V CG
Sbjct: 315 RMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLR-FMIQLVACG 357



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + Y++CG 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKTTINKPTCVKA-LKPEKVKYVACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEEGNVYATGGNNDGQLGLGDTEG-------------RNTFYPISFFTSQHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P  V   I + I  ++CG+  
Sbjct: 144 QLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVT--IGKPISWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +T  G +YT G    G+LG+P   + +   P  V   I E  ++ VACG  H   LT
Sbjct: 202 SAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVT-RIPEKVIQ-VACGGGHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
            T  VYT+G G  GQLG G      S P  ++++KD ++  + CG N TA+I
Sbjct: 260 ETI-VYTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALI 310



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEIL 293
           P  V++     V  +ACG  H ++ T++G +++ G  + G+LG G  E   +   +    
Sbjct: 78  PTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T +G+L+ WGD +   G +G  +  +  +P +V+    G  +
Sbjct: 138 SQHKIKQLSAGSNTSAALTENGELFMWGDNS--EGQIGLKNVTNVCVPHQVT---IGKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT  G L+TFG+   G LG  +   I+   P+ V T    +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLV-TRIPEKVIQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T++             ++T+G G  G+LG G     +F    P+ +  + 
Sbjct: 252 GGHT---VVLTETI------------VYTFGLGQFGQLGLG---TFIFETSEPKAIEYIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D  I  ++CG + +  +T  G +YT G   YG+LG+ +    +  VPT    +     ++
Sbjct: 294 DHKISSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLC-CDFLRFMIQ 352

Query: 525 EVACGAYHVAALTS 538
            VACG  H+    +
Sbjct: 353 LVACGGCHMVIFAT 366



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LKNVTNVCVPHQV--TIGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQL+  +    ++ VACG  HT  +T +  +Y
Sbjct: 207 MDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPEKVIQ-VACGGGHTVVLTET-IVY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      K    +    +S ISCG  HTA++T  G ++TFGDG
Sbjct: 265 TFGLGQF--GQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +G LG G  +  +  +P             V+CG  H   V+ AT
Sbjct: 323 RYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCH--MVIFAT 366


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 35/342 (10%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV-SHPQLIEI 292
           L   VE+    +V ++  G+R+++ +   G++F+WG    G LGH  E    S P L++ 
Sbjct: 28  LASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKS 87

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY-------NSGLLGHGSKVSCWIPRKVS 345
           L+ V +   A G +H  AV   G  Y WG   Y       +    G   +    IP++ +
Sbjct: 88  LASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA 147

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             L    +  ++ G  H+ V+T  G+++T+G         GD    SIP  V+ L  +R 
Sbjct: 148 PQLT---VRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGDIKQISIPVRVQGLENVRL 200

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             ++ G +H  A+                 G L+ WG+ + G+LG GD +PR FP  V  
Sbjct: 201 --IAVGAFHNLAL--------------KEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQG 244

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD---GLVPTRVDGEIAESF 522
           L D  +  +A G   S ALT  G VY  G   +G+LG    D    ++P +V+    E  
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
           + +V+CG  H  ALT   +++++G+G +G+LG+G K     P
Sbjct: 305 I-QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 27/324 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + +WG    G+LG G + +     ++E L   NV  V  G  ++ A+   G L+TWG   
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWG--- 63

Query: 325 YNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +N  G LGH  +        +  +L  + +   + G WH   V   G  + +G   +G  
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123

Query: 384 GHGDHISTSIPREVETLRGLRTTRV---SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G         P + ET R +R   V    C    T   V A  + S      T  G ++T
Sbjct: 124 GE-------EPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVV---LTREGYVWT 173

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG         GD +    P  V  L  EN+  +A G   ++AL   G ++  G+  YGQ
Sbjct: 174 WGQ----PWPPGDIKQISIPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG         P  V G + +  + ++A G +H  ALT+  +VY WG+G +G+LG GD D
Sbjct: 228 LGTGDTQPRSFPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 560 --NRNSPTLVDFLKDKQVKRVVCG 581
             ++  P  V+ L  + + +V CG
Sbjct: 287 KSSKMLPQKVNLLAGEDIIQVSCG 310



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + + + G +++WG    G+LG G     S P  ++ L  + +  +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAG 256

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+ A+T  G++Y WG G +     G   K S  +P+KV+  L G  +  +SCG  H+ 
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSV 315

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTS----IPREVETLRG------------LRTTRV 408
            +T  G +F+FG G  G LG+G  ++T     +P ++  L G                 V
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHV 375

Query: 409 SCGVWHTAAVV 419
           +CG  HT A+V
Sbjct: 376 ACGGRHTLAIV 386



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 29/151 (19%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKA 237
           ++L  + +   H +A     + G+V+ WG G         EH R+G+  + ++  +LP+ 
Sbjct: 248 LTLVDIAAGGWHSTA---LTNEGEVYGWGRG---------EHGRLGFGDNDKSSKMLPQK 295

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI----L 293
           V      D+  ++CG  H+V +T+ G IFS+G    GRLG+GR+     P  + I    L
Sbjct: 296 VNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPL 355

Query: 294 SG------------VNVELVACGEYHTCAVT 312
            G               + VACG  HT A+ 
Sbjct: 356 EGRFNHTDEEDDGKWIAKHVACGGRHTLAIV 386


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 177/358 (49%), Gaps = 38/358 (10%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           ++ WGEG A    LG GE   G    R      P+A      + V   ACG RH +L+  
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPG----PRAPADQAVVLV---ACGERHTLLLRD 54

Query: 262 QGEIFSWGEESGGRLGH----GREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
            G + S G+ S G+LG     G+E     P+LI+ L    V  V+CG+ H+ AV   G +
Sbjct: 55  DGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRV 114

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y+WG GT+  G LG G      IP+ ++  L    +  ++CG  H+  +T+ G +F++G 
Sbjct: 115 YSWGAGTF--GQLGTGELGDRLIPKTINA-LSKYKVIQVACGHDHSIALTNDGRIFSWGQ 171

Query: 378 GSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
              G LG G  IS+   P++V  L G+   +V+ G  H+ A+ ++              G
Sbjct: 172 NIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLS--------------G 217

Query: 437 KLFTWGDGDKGRLGHGDKEPR--LF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            ++ WG  +  +LG    +P+  +F P  +A L   ++  V+CG + +  LT +G VYT 
Sbjct: 218 VVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTF 277

Query: 494 GSAAYGQLG--VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKG 548
           G  + GQLG     +    P +V  E  +  V  +ACG+YH     STS ++ ++G+G
Sbjct: 278 GDDSAGQLGRNSSSSPKFGPQKV--EWIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 157/333 (47%), Gaps = 37/333 (11%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVN------VELVACGEYHTCAVTRSGDLY 318
           ++ WGE S G+LG G+   VS P  +    G        V LVACGE HT  +   G + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGP--VPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVA 59

Query: 319 TWGDGTYNSGLLGH----GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           + GD +   G LG     G +   + P  +   L+   + ++SCG  H+  V + G +++
Sbjct: 60  SCGDNS--RGQLGRRLPSGQEKRSYGPELIQA-LETQKVVHVSCGKEHSLAVCNKGRVYS 116

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G G+FG LG G+     IP+ +  L   +  +V+CG  H+ A+              T+
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIAL--------------TN 162

Query: 435 CGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            G++F+WG    G+LG G D   +  P+ V+ L    + QVA G   S AL+ SG VY  
Sbjct: 163 DGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGW 222

Query: 494 GSAAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           G     QLG+    P      P  +   +    V  V+CGA H A LT    VYT+G  +
Sbjct: 223 GRNNAHQLGLSQAKPKEQIFKPYSI-AALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDS 281

Query: 550 NGQLGHGDKDN-RNSPTLVDFLKDKQVKRVVCG 581
            GQLG     + +  P  V+++ D  V  + CG
Sbjct: 282 AGQLGRNSSSSPKFGPQKVEWI-DGPVSLLACG 313



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 139/294 (47%), Gaps = 29/294 (9%)

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGG 217
           L    P     RS   E  +   +  V   S G  H     + G V+ WG G   G LG 
Sbjct: 69  LGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTF-GQLGT 127

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           GE           D L+PK + +     V  +ACG  H++ +T  G IFSWG+   G+LG
Sbjct: 128 GE---------LGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLG 178

Query: 278 HGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGLLGHGSK 335
            G++ +  + PQ +  L G+ +  VA G  H+ A++ SG +Y WG +  +  GL     K
Sbjct: 179 LGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPK 238

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-P 394
              + P  ++  L  + ++++SCG  HTAV+T  G ++TFGD S G LG     S    P
Sbjct: 239 EQIFKPYSIAA-LRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGP 297

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
           ++VE + G   + ++CG +HT   +             ++ G+L ++G G   R
Sbjct: 298 QKVEWIDG-PVSLLACGSYHTLVRI-------------STSGQLLSFGRGPLQR 337



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 490 VYTMGSAAYGQLGVPVADGL---VPTRVDGEI-AESFVEEVACGAYHVAALTSTSKVYTW 545
           +Y  G  + GQLG+   +G+   VP R      A+  V  VACG  H   L     V + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 546 GKGANGQLGH----GDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           G  + GQLG     G +     P L+  L+ ++V  V CG   +  +C
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVC 109


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 184/391 (47%), Gaps = 41/391 (10%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-----------PKAVESTMALDVHNIAC 251
           +F WG G A+G LGGG   +    S   + L            P  +++  +     I+C
Sbjct: 50  LFSWGRG-ASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H+ L T  G+++ WG+  GGRLG G+E  V  P L  +    ++  +A G  H+ A+
Sbjct: 109 GLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T  GD++TWG G +  G LGH       +PR+V  + D   +S I+    HTA +T +G 
Sbjct: 168 THQGDVFTWGYGGF--GALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITESGE 224

Query: 372 LFTFG-------DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           L+ +G        G     G  +    S+P +V+ L  +    VSCG + T A+      
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMAL------ 277

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T  G+L+ WG      LG GD      P  V  L    I Q+ACG   S+AL
Sbjct: 278 --------TKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLAL 329

Query: 485 TTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T  G V + G   +GQLG   + +  VPT ++  +A+  +  +A G    AA+T   +++
Sbjct: 330 TEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITDGGELW 388

Query: 544 TWGKGANGQLG-HGDKDNRNSPTLVDFLKDK 573
            WG   + QLG  G  + + +P  V+FL ++
Sbjct: 389 MWGNAKDFQLGVPGLPEIQTTPVEVNFLTEE 419



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 172/397 (43%), Gaps = 40/397 (10%)

Query: 150 DSVSFSPSPLTNAFPDNSNDRSSAAETFRISL--SSVVSSSSHGSAHEDFDSLGDVFIWG 207
           + +   PSP+ N    +    S A    RI    SS     S G  H      GD++IWG
Sbjct: 66  EEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFHSGLTIDGDLWIWG 125

Query: 208 EGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFS 267
           +G   G LG         F ++    +P          +  IA G  H+V +T QG++F+
Sbjct: 126 KG-DGGRLG---------FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFT 175

Query: 268 WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG------ 321
           WG    G LGH        P+ ++      +  +A    HT A+T SG+LY WG      
Sbjct: 176 WGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDG 235

Query: 322 -DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
             G         G  +S  +P KV      + ++ +SCG + T  +T  G L+ +G  S 
Sbjct: 236 RLGLGPGRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSN 291

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
             LG GD++    P  V +L G+R T+++CG +H+ A+              T  GK+ +
Sbjct: 292 YELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLAL--------------TEEGKVLS 337

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG G  G+LG      +  P  +  L D+ I  +A G   S A+T  G ++  G+A   Q
Sbjct: 338 WGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQ 397

Query: 501 LGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           LGVP    +  T V+        EE  C  + V +++
Sbjct: 398 LGVPGLPEIQTTPVE---VNFLTEEDECQPHKVISIS 431



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 162/361 (44%), Gaps = 64/361 (17%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEIL---SGVNVEL-----------------VAC 303
           ++FSWG  + G+LG G E    +P  +  L   S  +  L                 ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY----ISCG 359
           G +H+  +T  GDL+ WG G  + G LG G + S ++P     NL+ +   +    I+ G
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-----NLNPLFEEHSIRCIALG 160

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +T  G +FT+G G FGALGH  +    +PR V+     + + ++    HTAA+ 
Sbjct: 161 GLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAI- 219

Query: 420 VATDSSSSSPSGSTSCGKLFTWG--DGDKGRL---------GHGDKEPRLFPECVAPLID 468
                        T  G+L+ WG  +GD             G G   P        P   
Sbjct: 220 -------------TESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP--- 263

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVA 527
             +  V+CG   ++ALT  G ++  G+ +  +LG      G  P  V   +    + ++A
Sbjct: 264 --VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVP-SLEGVRITQIA 320

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
           CG YH  ALT   KV +WG G +GQLG     N+  PT ++ L DK++  +  G + +A 
Sbjct: 321 CGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAA 380

Query: 588 I 588
           I
Sbjct: 381 I 381


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 49/350 (14%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ +S P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS--------KVSCWIPRKVSGNLDGIHLSYISCGL 360
              T  G +Y  G    N G LG G         ++  + P+         ++  +S G 
Sbjct: 138 LVSTDKGSVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPKD--------NIKQLSAGA 187

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T  G LF +GD S G +G  +  +  IP EV    G   + +SCG +H+A V V
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFVTV 245

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVAC 476
                          G+L+T+G+ + G+LG  +   +L     +P     I E + QVAC
Sbjct: 246 D--------------GELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPEKVIQVAC 288

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHV 533
           G   +V LT    VY  G   +GQLG  +   L  T   +V   I +  +  ++CG  H 
Sbjct: 289 GGGHTVVLTDK-VVYAFGLGQFGQLG--LGTFLFETSEPKVIERIKDQKISYISCGENHT 345

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           A +T    +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 346 ALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACG 395



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 154/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T +G +++ G  + G+LG G   + D  H Q+   
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFH-QIGFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
               N++ ++ G   + A+T  G L+ WGD +   G +G  +K +  IP +V+    G  
Sbjct: 175 TPKDNIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLKNKSNVCIPHEVTV---GKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  +  +V+C
Sbjct: 230 ISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPEKVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV TD              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTDKV------------VYAFGLGQFGQLGLGT---FLFETSEPKVIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKISYISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFT-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   +  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 VDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQ-VACGGGHTVVLTDKV-VY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      KV   +    +SYISCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCH--MLVFAT 404


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 160/338 (47%), Gaps = 25/338 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  L+T   +++ +G  + G+LG G ++ V  P  ++ L    V+L ACG  HT
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G++Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 96  LVSTEGGNVYATGGN--NEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTE 153

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G     +  +PR+V    G   + +SCG +H+A V +        
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTV--GKPISWISCGYYHSAFVTME------- 204

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVACGHDLSVALTT 486
                  GKL+T+G+ + G+LG   ++      P+ V+  I E + QVACG   +V LT 
Sbjct: 205 -------GKLYTFGEPECGKLGLPSEQLINHRKPQLVSG-ISEKVIQVACGGGHTVVLTE 256

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGE-IAESFVEEVACGAYHVAALTSTSKVYTW 545
              VYT G   +GQLG+       P     E + +  +  ++CG  H A +T    +YT+
Sbjct: 257 KA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTF 315

Query: 546 GKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           G G +G+LG G ++  N+  PTL        +  V CG
Sbjct: 316 GDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 157/308 (50%), Gaps = 33/308 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T+ G +++ G  + G+LG G   + +   LI   +
Sbjct: 74  PICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFT 133

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G+L+ WGD +   G +G  S  + ++PR+V+    G  +
Sbjct: 134 SRHKIKQLSAGANISAALTEDGELFMWGDNS--EGQIGLNSISNVYVPRQVT---VGKPI 188

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT  G L+TFG+   G LG      I+   P+ V  +   +  +V+CG
Sbjct: 189 SWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGI-SEKVIQVACG 247

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD---KEPRLFPECVAPLID 468
             HT   VV T+ +            ++T+G G  G+LG G    + P   P  +  + D
Sbjct: 248 GGHT---VVLTEKA------------VYTFGQGRFGQLGLGSFIFQAPE--PAILEHVKD 290

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVEE 525
           + I  ++CG + +  +T  GH+YT G   +G+LG+ +    +  VPT +    ++  +  
Sbjct: 291 QKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPT-LCSHFSKFIIHL 349

Query: 526 VACGAYHV 533
           VACG  H+
Sbjct: 350 VACGGCHM 357



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  +T +  LY +G  + N G LG GSK + + P  V   L    +   +CG 
Sbjct: 36  LSCGDEHTALITGNNKLYMFG--SNNWGQLGLGSKSAVYRPICVKA-LKSEKVKLAACGR 92

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD    +  R    L    T+R         A + 
Sbjct: 93  NHTLVSTEGGNVYATGGNNEGQLGLGD----TEERNSFHLISFFTSRHKIKQLSAGANIS 148

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
           A           T  G+LF WGD  +G++G         P  V   + + I  ++CG+  
Sbjct: 149 AA---------LTEDGELFMWGDNSEGQIGLNSISNVYVPRQVT--VGKPISWISCGYYH 197

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAAL 536
           S  +T  G +YT G    G+LG+P ++ L+    P  V G I+E  ++ VACG  H   L
Sbjct: 198 SAFVTMEGKLYTFGEPECGKLGLP-SEQLINHRKPQLVSG-ISEKVIQ-VACGGGHTVVL 254

Query: 537 TSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           T  + VYT+G+G  GQLG G        P +++ +KD++++ + CG N TA+I
Sbjct: 255 TEKA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALI 306



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 18/188 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G   +  ++  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 155 GELFMWGDN--------SEGQIG--LNSISNVYVPRQV--TVGKPISWISCGYYHSAFVT 202

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +G+++++GE   G+LG   E  ++H  PQL+  +S   ++ VACG  HT  +T    +Y
Sbjct: 203 MEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKVIQ-VACGGGHTVVLTEKA-VY 260

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG GS +       +  ++    + +ISCG  HTA++T  GH++TFGDG
Sbjct: 261 TFGQGRF--GQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDG 318

Query: 379 SFGALGHG 386
             G LG G
Sbjct: 319 RHGKLGLG 326


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+G+ +  ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG     S   P  +   LD   + +++CG  HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKNEF--GQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV----- 311

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 312 --------SDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 29/279 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +   S           + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L GI L+
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTAPQIVEHLAGIPLA 194

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG     S   P  +E L   +   ++CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G LFT+G G  G+LGH   +  L P  VA L    + Q+
Sbjct: 255 TALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQI 300

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVP 511
           ACG   ++A  +  G V++ GS   GQLG     D L+P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 13/195 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFPSTTA---PQIVEHLAGIPLAQISAGEAHSMALS 207

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+SWG+   G+LG         P LIE L    VE +ACG  HT  +T+ G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  G +F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 380 FGALGHGDHISTSIP 394
            G LG+G      IP
Sbjct: 325 EGQLGNGGTRDQLIP 339



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAH 202

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG    E +  P  +  L ++ +  +
Sbjct: 203 SMALSMS--------------GNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFL 248

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT  G ++T G+  +GQLG     + L P  V  E+A + V ++ACG +H 
Sbjct: 249 ACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELAGNRVTQIACGRWHT 307

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S   KV+++G G  GQLG+G   ++  P
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 34/225 (15%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H  +++S G  F +           D+ S    R    L+  +  +++CG +H+ A+   
Sbjct: 108 HMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQITCGDYHSLAL--- 153

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVAC 476
                      +  G+LF WG    G+LG G K    FP   AP I E++      Q++ 
Sbjct: 154 -----------SKGGELFAWGQNLHGQLGVGRK----FPSTTAPQIVEHLAGIPLAQISA 198

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           G   S+AL+ SG++Y+ G   +GQLG+   +      +   +    VE +ACG  H A L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           T    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACG 303



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTAPQIVEHLAGI 191

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG    ++++SP+L++ L +++V+ + CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACG 251

Query: 582 LNFTAII 588
            + TA++
Sbjct: 252 GSHTALL 258


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 169/364 (46%), Gaps = 45/364 (12%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           +++CG  H+ ++T+ G +  +G  + G+LG   +     P  ++ L    V+L ACG  H
Sbjct: 40  HMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDH 99

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVS--------C-WIPRKVSGNLDGIHLSYISC 358
           T   T  G +Y+ G        LGH  K +        C W P K+           +S 
Sbjct: 100 TIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKM-----------LSA 148

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G   +A +T  G LF +GD S G +  GD    + PREV    G     VSCG  H+A V
Sbjct: 149 GCNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHV--GEAVIWVSCGYKHSAFV 206

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFPECVAPLIDENICQVAC 476
            V               G+L+T+G+   GRLG   ++      P+ V  ++  ++ +V C
Sbjct: 207 TV--------------YGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG-HVTRVCC 251

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           G + +V LT   +VYT G   YGQL  G  + +  +P  +      S V  +ACG  H A
Sbjct: 252 GGEHTVVLTEK-NVYTFGRGQYGQLGHGTFLFEVHLPKALQ-HFCNSKVRHIACGENHTA 309

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            +T +  +YT+G G +G+LG G+++  N+ SPTL        V+ V CG +   ++   +
Sbjct: 310 VVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSVSCGGHHMLVLATPR 369

Query: 593 WVSS 596
              S
Sbjct: 370 PAES 373



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 35/317 (11%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           A  P +V++  +  V   ACG  H ++ T  G ++S G    G+LG G     ++  L+ 
Sbjct: 76  ARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLR 135

Query: 292 ILSG-VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
                  +++++ G   + A+T  G L+ WGD +   G +  G +     PR+V     G
Sbjct: 136 PFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSV--GQIAFGDEGFAAEPREVHV---G 190

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIST-SIPREVETLRGLRTTRV 408
             + ++SCG  H+A VT  G L+TFG+ + G LG   + ++   +P++V+ + G   TRV
Sbjct: 191 EAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG-HVTRV 249

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
            CG  HT   VV T+ +            ++T+G G  G+LGHG     LF    P+ + 
Sbjct: 250 CCGGEHT---VVLTEKN------------VYTFGRGQYGQLGHGT---FLFEVHLPKALQ 291

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAES 521
              +  +  +ACG + +  +T SG +YT G   +G+LG+      +   PT       + 
Sbjct: 292 HFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCT-RFLQY 350

Query: 522 FVEEVACGAYHVAALTS 538
            V+ V+CG +H+  L +
Sbjct: 351 AVQSVSCGGHHMLVLAT 367



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 62/291 (21%)

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L   H  ++SCG  H+AV+T  G L  FG  ++G LG     S   P  V+ L+  +   
Sbjct: 33  LKNDHPKHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKL 92

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGS----------------------------------- 432
            +CG  HT   +V T   S   +GS                                   
Sbjct: 93  AACGRDHT---IVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAG 149

Query: 433 -------TSCGKLFTWGDGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHDLS 481
                  T  G+LF WGD   G++  GD+    EPR         + E +  V+CG+  S
Sbjct: 150 CNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREV------HVGEAVIWVSCGYKHS 203

Query: 482 VALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             +T  G +YT G +A G+LG+    +A+  VP +V G +    V  V CG  H   LT 
Sbjct: 204 AFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG--HVTRVCCGGEHTVVLTE 261

Query: 539 TSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            + VYT+G+G  GQLGHG      + P  +    + +V+ + CG N TA++
Sbjct: 262 KN-VYTFGRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVV 311



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 48/186 (25%)

Query: 169 DRSSAAETFRISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLG----------- 216
           D   AAE   + +   V   S G  H  F ++ G ++ +GE  ANG LG           
Sbjct: 177 DEGFAAEPREVHVGEAVIWVSCGYKHSAFVTVYGRLYTFGES-ANGRLGLQKEQLANHRV 235

Query: 217 ----------------GGEHRVG------YSFSRQT-----------DALLPKAVESTMA 243
                           GGEH V       Y+F R             +  LPKA++    
Sbjct: 236 PQQVQGVLGHVTRVCCGGEHTVVLTEKNVYTFGRGQYGQLGHGTFLFEVHLPKALQHFCN 295

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELV 301
             V +IACG  H  +VT  G ++++G+   G+LG G E  ++   P L        V+ V
Sbjct: 296 SKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSV 355

Query: 302 ACGEYH 307
           +CG +H
Sbjct: 356 SCGGHH 361



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           V +  +G ++T G  ++           VP++    +     + ++CG  H A +T   +
Sbjct: 7   VDIPETGAIFTFGRTSFA--------NNVPSKF--WLKNDHPKHMSCGGEHSAVITENGR 56

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
           +  +G    GQLG   K +   PT V  LK ++VK   CG + T +   H  V S 
Sbjct: 57  LLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSA 112


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 175/370 (47%), Gaps = 36/370 (9%)

Query: 203 VFIWGEGIANGF-LGGGEHRVGYSFSRQTDALLPKAVESTM--ALDVHNIACGARHAVLV 259
           ++ WG  +     LGG EH   ++            +E T   A +V  +  G  H V++
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFA-----------PIEHTFKYASNVSQVTMGENHTVML 49

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           TK GE+FS G     +LGH ++   + P+ +E L    +  ++CG  HT A    G L+ 
Sbjct: 50  TKSGEVFSCGNNDLDQLGHKKQR--TKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFG 107

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG  ++  G LG        +P K+  +L   H+  ISCG  H+  +T+ G L+++G   
Sbjct: 108 WGSDSH--GQLGFNGTTQP-LP-KIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNY 163

Query: 380 FGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            G LG G        P  +++L G+    ++CG  H+ A+              +  G +
Sbjct: 164 DGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFAL--------------SKSGAI 209

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           + WG    G+LG  D+E +L P  +  L    +  +ACG D S  L+  G V+T G+  Y
Sbjct: 210 YGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMY 269

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALT-STSKVYTWGKGANGQLGHGD 557
           GQLG       +  R   E+  S V +V+CG  H  AL  S  +VY++G G  GQLG   
Sbjct: 270 GQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRV 329

Query: 558 KDNRNSPTLV 567
           K N ++P +V
Sbjct: 330 KTNCSTPQVV 339



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 31/324 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILS-----GVNVELVACGEYHTCAVTRSGDLYT 319
           ++ WG    G LG G    + H Q+   +        NV  V  GE HT  +T+SG++++
Sbjct: 1   MYCWGSTVHGELGLG---GIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFS 57

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
            G+   +   LGH  + +   P KV G LD   ++ ISCG  HT      G LF +G  S
Sbjct: 58  CGNNDLDQ--LGHKKQRTK--PEKVEG-LDFYRITKISCGGNHTLAFNEWGQLFGWGSDS 112

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG  +  +  +P+ +++L      ++SCG  H+ A+              T+ G+L+
Sbjct: 113 HGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLAL--------------TNNGELY 157

Query: 440 TWGDGDKGRLGHGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +WG    G+LG G + E    P  +  L+   I  +ACG + S AL+ SG +Y  G   Y
Sbjct: 158 SWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTY 217

Query: 499 GQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+   +  L PT++   +    V+ +ACG    A L++   V+T G G  GQLGHG 
Sbjct: 218 GQLGLNDEENKLHPTQLK-TLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGS 276

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
             N   P  +  L    V +V CG
Sbjct: 277 TSNEILPRKIMELMGSTVTQVSCG 300



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 23/275 (8%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +Y WG   +    LG       + P + +      ++S ++ G  HT ++T +G +F+ G
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYAS-NVSQVTMGENHTVMLTKSGEVFSCG 59

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           +     LGH    +   P +VE L   R T++SCG  HT A                  G
Sbjct: 60  NNDLDQLGHKKQRTK--PEKVEGLDFYRITKISCGGNHTLAF--------------NEWG 103

Query: 437 KLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           +LF WG    G+LG +G  +P   P+ +  L   +I Q++CG + S+ALT +G +Y+ G 
Sbjct: 104 QLFGWGSDSHGQLGFNGTTQP--LPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGG 161

Query: 496 AAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
              GQLG+ +       PT +   +    +  +ACG+ H  AL+ +  +Y WGK   GQL
Sbjct: 162 NYDGQLGLGMRSEYEKQPTLIKSLLGIP-IAFIACGSNHSFALSKSGAIYGWGKNTYGQL 220

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           G  D++N+  PT +  L+  +VK + CG +F+A +
Sbjct: 221 GLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 13/176 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG G  +G LG G       + +Q     P  ++S + + +  IACG+ H+  ++
Sbjct: 154 GELYSWG-GNYDGQLGLGMRS---EYEKQ-----PTLIKSLLGIPIAFIACGSNHSFALS 204

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G I+ WG+ + G+LG   E +  HP  ++ L  + V+ +ACGE  +  ++  G ++T 
Sbjct: 205 KSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTF 375
           G G Y  G LGHGS  +  +PRK+   L G  ++ +SCG  HT A+V S G +++F
Sbjct: 265 GAGMY--GQLGHGSTSNEILPRKIM-ELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317


>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 597

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 192/426 (45%), Gaps = 58/426 (13%)

Query: 196 DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIAC--GA 253
           D +  G V+  G+  A G LG G+      F+          + ST    VH+++   GA
Sbjct: 103 DLEEQGAVYCAGKNNA-GQLGLGDWNDRQCFT---------VIRSTRGKHVHHVSTSNGA 152

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREAD----VSHPQLIEILSGVNVELVACGEYHTC 309
             +   T Q ++F WG    G LG    +        PQL+E L+G  +   + G  H C
Sbjct: 153 NISFATTHQHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHAC 212

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV++ GDL+ WG+G++  G+LG G   +   P+ ++  LD I +  +  G  H  + TS 
Sbjct: 213 AVSKGGDLFVWGNGSF--GVLGTGDTNNVDTPKCLN-TLDKIAVVDVVTGEKHACIKTSQ 269

Query: 370 GHLFTFGDGSFGALGHGDH---ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
             L+ +G  + G LG G++   +  S P  +      +   ++CG  HT A   +T    
Sbjct: 270 HELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLACTSST---- 325

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACG--HDLSVA 483
                      +F+WG GD GRLGHG D   R  P  +  L   ++  +  G  H   V 
Sbjct: 326 -----------VFSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVI 374

Query: 484 ----LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
               +  SG +YT GS   GQLG   V     P  V G + ++FV  V CG+ H AA+ S
Sbjct: 375 AIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTG-LCDAFVSAVFCGSSHNAAIAS 433

Query: 539 TSKVYTWGKGANGQLGH--GDKDNRNSP---------TLVDFLKDKQVKRVVCGLNFTAI 587
              +YTWG   +G LG    +K    +P         T+V+ +     + V CG ++T I
Sbjct: 434 DGNLYTWGSNKHGALGRLIEEKSTAFTPHPGIVIEFGTIVNRIGRGLPRSVTCGRDYT-I 492

Query: 588 ICLHKW 593
           +  H +
Sbjct: 493 VATHPY 498



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 162/364 (44%), Gaps = 40/364 (10%)

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAV 311
           R    + +QG ++  G+ + G+LG G   D     +I    G +V  V+   G   + A 
Sbjct: 99  RRIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTSNGANISFAT 158

Query: 312 TRSGDLYTWGDGTYNSGLLGHGS----KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T    ++ WG GT   GLLG  S     V    P+ V   L+G  +   S G  H   V+
Sbjct: 159 THQHQVFVWG-GT-GVGLLGFTSSSKQNVMFETPQLVE-ELNGEEIIKTSIGSSHACAVS 215

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G LF +G+GSFG LG GD  +   P+ + TL  +    V  G  H             
Sbjct: 216 KGGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACI---------- 265

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF---PECVAPLIDENICQVACGHDLSVAL 484
                TS  +L+ WG    GRLG G+ +  +F   P  +     E +  +ACG + ++A 
Sbjct: 266 ----KTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLAC 321

Query: 485 TTSGHVYTMGSAAYGQLG--VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS---- 538
           T+S  V++ GS   G+LG     +D   PT +   +  S V ++  G +H A + +    
Sbjct: 322 TSST-VFSWGSGDGGRLGHGSDCSDRWEPTEIVA-LKGSHVLDLGAGTWHSACVIAIPLM 379

Query: 539 --TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHK 592
             +  +YTWG G  GQLG G     ++P LV  L D  V  V CG +  A I     L+ 
Sbjct: 380 KDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYT 439

Query: 593 WVSS 596
           W S+
Sbjct: 440 WGSN 443


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG+     L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTF--LFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 174/367 (47%), Gaps = 44/367 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           ++ IACG  H + +T+ G +++ G    G+LG       S   L        V  ++ G 
Sbjct: 67  LNAIACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGY 126

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHT 363
            H+CA+T  G+LY WG  T  SG LG G +      +P KV   L GI++   + G  H+
Sbjct: 127 NHSCAITVDGELYMWGKNT--SGQLGLGKRAPNIVPLPTKVE-YLKGINIKMAALGSEHS 183

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDH---------ISTSIPREVETLRGLRTTRVSCGVWH 414
             ++  G  F++G G  G LGHG            S   PR ++ L G++   V+ G+ +
Sbjct: 184 VAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLN 243

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A     TD +          G +F +G+    +L   +      P  ++ L      +V
Sbjct: 244 SA----CTDEN----------GCVFVFGERGIEKLRLKEMSDATKPSLISELPSSK--EV 287

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT SG +YT GS   G LG+  +D + +P +V G   +S V +V+CG  H 
Sbjct: 288 ACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHT 347

Query: 534 AALTSTSKVYTWGKG------------ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           AA+ S  +V+TWG G            ++GQLGHG   +  +PT V F +D +  +V CG
Sbjct: 348 AAI-SEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCG 406

Query: 582 LNFTAII 588
            N T  I
Sbjct: 407 FNHTGAI 413



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 18/231 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G  F WG G++ G LG G       F +      P+ ++    + V  +A G  ++    
Sbjct: 190 GAAFSWGIGVS-GRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTD 248

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +F +GE    +L     +D + P LI  L   + + VACG YHTC +T SG+LYTW
Sbjct: 249 ENGCVFVFGERGIEKLRLKEMSDATKPSLISELP--SSKEVACGGYHTCVLTNSGELYTW 306

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---- 376
           G  +  +G LG GS     +P KV G      +S +SCG  HTA + S G +FT+G    
Sbjct: 307 G--SNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGS 363

Query: 377 DGSF--------GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           +G+F        G LGHG  +    P  V     ++  +VSCG  HT A++
Sbjct: 364 NGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAIL 414



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 432 STSCGKLFT--WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
           S   GK F   WG+GD GRLG G+ + +  P       ++ +  +ACG   ++ LT  G 
Sbjct: 26  SRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGC 85

Query: 490 VYTMGSAAYGQLGVPVAD--GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           VY  G   +GQLGV  +    + P  V GE  E  V +++ G  H  A+T   ++Y WGK
Sbjct: 86  VYATGLNDFGQLGVSESKHYSVEPLCVFGE--EKKVVQISAGYNHSCAITVDGELYMWGK 143

Query: 548 GANGQLGHGDK--DNRNSPTLVDFLKDKQVKRVVCG 581
             +GQLG G +  +    PT V++LK   +K    G
Sbjct: 144 NTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALG 179


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 38/347 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG+     L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTF--LFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN-FLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 73/366 (19%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQ-GEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           P  V++     +  ++CG  H+   + + G ++ WG    GRLG+  E  V  PQ++E L
Sbjct: 151 PTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECL 210

Query: 294 S-----GVNVELVACGEYHTCAV----------TRSGDLYTWGDGTY-----------NS 327
                  + V  ++CGE HT A+          T    L+ WG+              N+
Sbjct: 211 KIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNN 270

Query: 328 GLLGHGSKVSCWIPRKV--------------SGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
             +    ++S  +P ++              S  L G+H SY     +++A +TS G+++
Sbjct: 271 EDMQSAREIS--VPHQLDPDPFQHDTDNKNYSNQLIGVHASY-----YYSAALTSNGNVY 323

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T+G G FG LG+ D      P+ ++ L G + TR+S G +H AA+              T
Sbjct: 324 TWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAI--------------T 369

Query: 434 SCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
             G++F+WG G  G+LGHG    E ++ P  V+ L + +I  ++CG   ++ALT  G VY
Sbjct: 370 EQGQVFSWGRGINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNKGEVY 427

Query: 492 TMGSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           + G        +   D L   +P +V     E  + +++ G  H +ALT   K++TWG  
Sbjct: 428 SWGGGQ--LGQLGHGDFLRQSLPIKVAN--LEDNIAQISAGKRHSSALTDDGKLFTWGSN 483

Query: 549 ANGQLG 554
             GQLG
Sbjct: 484 EYGQLG 489



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 155/338 (45%), Gaps = 64/338 (18%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV- 259
           G V+ WG G+ NG LG      G     Q    L  A+E  + + V  I+CG  H + + 
Sbjct: 180 GLVYGWGLGL-NGRLG--NENEGVVQEPQVLECLKIAME--IKMKVLQISCGENHTLALI 234

Query: 260 ---------TKQGEIFSWGEESGGRLGHGREAD-----------VSHPQLIEI------- 292
                    T Q ++F WG     +LG   +AD           +S P  ++        
Sbjct: 235 QMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDT 294

Query: 293 --------LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
                   L GV+        Y++ A+T +G++YTWG G +  G LG+        P KV
Sbjct: 295 DNKNYSNQLIGVHASY-----YYSAALTSNGNVYTWGSGEF--GRLGYMDIKKQPQP-KV 346

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
              L G  ++ IS G +H A +T  G +F++G G  G LGHG  ++    R V  L+ + 
Sbjct: 347 LKELTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIH 406

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
              +SCG  HT A+              T+ G++++WG G  G+LGHGD   +  P  VA
Sbjct: 407 IIDISCGESHTLAL--------------TNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVA 452

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
            L D NI Q++ G   S ALT  G ++T GS  YGQLG
Sbjct: 453 NLED-NIAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 42/337 (12%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-----------SK 335
           P+ +  L   N+  V CG   T  +T+S + + +  G+  +  LGH            S 
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGSFGALGHGDHISTSIP 394
           +       +   L+   +  +SCG  H+ A    +G ++ +G G  G LG+ +      P
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204

Query: 395 REVETLR-----GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
           + +E L+      ++  ++SCG  HT A++     +     G TS  KLF WG+ DK +L
Sbjct: 205 QVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNE----GETSQNKLFVWGNNDKLQL 260

Query: 450 G-----HGDKEP-----------RLFPECVAPLIDE-----NICQVACGHDLSVALTTSG 488
           G      G+ E            +L P+      D       +  V   +  S ALT++G
Sbjct: 261 GMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNG 320

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           +VYT GS  +G+LG          +V  E+    V  ++ G YH AA+T   +V++WG+G
Sbjct: 321 NVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWGRG 380

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            NGQLGHG   N +    V  L++  +  + CG + T
Sbjct: 381 INGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHT 417



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 152/350 (43%), Gaps = 49/350 (14%)

Query: 239 ESTMALDVHNI---ACGARHAVLVTKQGE--IFSWGEESGGRLGHGREAD---------- 283
           E  +AL+ +NI    CG+     +TK  E  +FSWG     +LGH               
Sbjct: 86  ERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSI 145

Query: 284 --VSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
             V  P +++ L    ++ ++CG  H+ A    SG +Y WG G   +G LG+ ++     
Sbjct: 146 QIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGL--NGRLGNENEGVVQE 203

Query: 341 PR-----KVSGNLDGIHLSYISCGLWHTAVV----------TSAGHLFTFGDGSFGALG- 384
           P+     K++  +  + +  ISCG  HT  +          TS   LF +G+     LG 
Sbjct: 204 PQVLECLKIAMEIK-MKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262

Query: 385 ----HGDHISTSIPREVETLRGLRTTRVSCGV--WHTAAVVVATDSSSSSPSGSTSCGKL 438
                G++      RE+     L            + +  ++   +S    +  TS G +
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG G+ GRLG+ D + +  P+ +  L    + +++ G+    A+T  G V++ G    
Sbjct: 323 YTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWGRGIN 382

Query: 499 GQLG---VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           GQLG   V   D + P      +    + +++CG  H  ALT+  +VY+W
Sbjct: 383 GQLGHGSVLNEDQVRPVSA---LQNIHIIDISCGESHTLALTNKGEVYSW 429



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 14/195 (7%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G+V+ WG G           R+GY   ++     PK ++      V  I+ G  H   
Sbjct: 318 SNGNVYTWGSGEFG--------RLGYMDIKKQPQ--PKVLKELTGFQVTRISLGYYHGAA 367

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T+QG++FSWG    G+LGHG   +    + +  L  +++  ++CGE HT A+T  G++Y
Sbjct: 368 ITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVY 427

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           +WG G       G   + S  +P KV+   D I  + IS G  H++ +T  G LFT+G  
Sbjct: 428 SWGGGQLGQLGHGDFLRQS--LPIKVANLEDNI--AQISAGKRHSSALTDDGKLFTWGSN 483

Query: 379 SFGALGHGDHISTSI 393
            +G LG   +++  +
Sbjct: 484 EYGQLGRQANVTVGL 498



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 65/293 (22%)

Query: 348 LDGIHLSYISCGLWHTAVVTSA--GHLFTFGDGSFGALGHGDHISTSI------------ 393
           L+  +++ + CG   T  +T +   H+F++G      LGH  +  +              
Sbjct: 91  LEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQ 150

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
           P  V+ L   +   +SCG  H+ A              S   G ++ WG G  GRLG+ +
Sbjct: 151 PTIVKALENQKIDGLSCGTSHSFAW-------------SNESGLVYGWGLGLNGRLGNEN 197

Query: 454 ----KEPRLFPEC--VAPLIDENICQVACGHDLSVAL----------TTSGHVYTMGSAA 497
               +EP++  EC  +A  I   + Q++CG + ++AL          T+   ++  G+  
Sbjct: 198 EGVVQEPQVL-ECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNND 256

Query: 498 YGQLGVP-VADG-----------LVPTRVDGEIAESFVEE---------VACGAYHVAAL 536
             QLG+   ADG            VP ++D +  +   +          V    Y+ AAL
Sbjct: 257 KLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAAL 316

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           TS   VYTWG G  G+LG+ D   +  P ++  L   QV R+  G    A I 
Sbjct: 317 TSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAIT 369



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 25/159 (15%)

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTS--GHVYTMGSAAYGQLGVPVADGLV- 510
           ++PR  PE V  L   NI QV CG D +  +T S   HV++ GS    +LG         
Sbjct: 81  RDPR--PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPN 138

Query: 511 ------------PTRVDGEIAESFVEEVACGAYHVAALTSTSK-VYTWGKGANGQLGHGD 557
                       PT V   +    ++ ++CG  H  A ++ S  VY WG G NG+LG+ +
Sbjct: 139 NVSSSSIQIVKQPTIVKA-LENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNEN 197

Query: 558 KDNRNSPTLVDFLK-----DKQVKRVVCGLNFT-AIICL 590
           +     P +++ LK       +V ++ CG N T A+I +
Sbjct: 198 EGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQM 236


>gi|156098949|ref|XP_001615489.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148804363|gb|EDL45762.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 456

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 174/372 (46%), Gaps = 43/372 (11%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH------- 286
           +P+ V +     +  ++ G  HA  +   G IF++G    G+LG   E +          
Sbjct: 92  MPEKVPNFENAKIEKLSAGCDHAAFIV-DGRIFTYGLNDKGQLGRSIEEENDQNKSYTLT 150

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGL--LGHGSKVSCWIPRK 343
           P+ ++    V  + V CG  HT AV  + +LY+WG  G +  G   LGHG+K +   P+K
Sbjct: 151 PREVKTEGNVKFKDVCCGYKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKK 210

Query: 344 V-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-- 400
           V S   D      I CG  H+ V+T  G ++  G G FG LG G+H       E++    
Sbjct: 211 VESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLFFEEIDFFIS 270

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
             +    +SCG  H+ +  ++TD            G+++ WG  D G+LG  +    L+ 
Sbjct: 271 NNITVKGISCG--HSFSAALSTD------------GEVYVWGRNDYGQLGIENSIGDLYS 316

Query: 461 ECVAP-------LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
             V P       + +  I  +ACG +  +A + +  ++  GS A+ +   P A  L P  
Sbjct: 317 HEVYPNKVKYFDMENIKIKFIACGDNHMIACSENNVIFFWGSRAWLE---PKAITLSPLY 373

Query: 514 VDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD--F 569
            +  I ++ ++++  G   Y+ + L S +K+Y+WGK  +  L  GDK N N PTLVD   
Sbjct: 374 QNSVIKKN-IDKIEAGGNTYYYSMLLSDNKLYSWGKYNSSCLALGDKKNHNEPTLVDSKL 432

Query: 570 LKDKQVKRVVCG 581
             D+ V  + CG
Sbjct: 433 FNDEIVCDISCG 444



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 148/361 (40%), Gaps = 68/361 (18%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD-----ALLPKAVE 239
           +   S G  H  F   G +F +G           + ++G S   + D      L P+ V+
Sbjct: 104 IEKLSAGCDHAAFIVDGRIFTYGLN--------DKGQLGRSIEEENDQNKSYTLTPREVK 155

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGE-----ESGGRLGHGREADVSHPQLIEILS 294
           +   +   ++ CG +H V V     ++SWG      +    LGHG + ++S P+ +E   
Sbjct: 156 TEGNVKFKDVCCGYKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKKVESFK 215

Query: 295 GVNVELV--ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL-DGI 351
             + E V   CG+ H+  +T++G +Y  G G +  G LG G+        ++   + + I
Sbjct: 216 SDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEF--GRLGKGNHGDQLFFEEIDFFISNNI 273

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG----HGDHISTSI-PREVE--TLRGLR 404
            +  ISCG   +A +++ G ++ +G   +G LG     GD  S  + P +V+   +  ++
Sbjct: 274 TVKGISCGHSFSAALSTDGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIK 333

Query: 405 TTRVSCGVWHTAAV-----------------------------VVATDSSSSSPSGST-- 433
              ++CG  H  A                              V+  +       G+T  
Sbjct: 334 IKFIACGDNHMIACSENNVIFFWGSRAWLEPKAITLSPLYQNSVIKKNIDKIEAGGNTYY 393

Query: 434 -----SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI--DENICQVACGHDLSVALTT 486
                S  KL++WG  +   L  GDK+    P  V   +  DE +C ++CG    +A T 
Sbjct: 394 YSMLLSDNKLYSWGKYNSSCLALGDKKNHNEPTLVDSKLFNDEIVCDISCGRGRVLAKTL 453

Query: 487 S 487
           +
Sbjct: 454 A 454


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
            CCMP526]
          Length = 1021

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 199/442 (45%), Gaps = 66/442 (14%)

Query: 178  RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
            R+  S+  S+ S  S+H    S   VF WG+G         E ++G+S   Q  AL    
Sbjct: 613  RVRQSTTFSTLSATSSHTIVPST-RVFAWGQGT--------EGQLGHS-PIQKSALTGAY 662

Query: 238  VEST---MALDV---------HN------IACGARHAVLVTKQGEIFSWGEESGGRLGHG 279
            VE +   + LD          HN      +A G  ++  VT+ G++++WG+ S  +LGHG
Sbjct: 663  VELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHG 722

Query: 280  READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG---DGTYNSGLLGHGSKV 336
                V  P+ +E L  V +  VACG++HT A+   G L+TWG         G LGHG + 
Sbjct: 723  DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEA 782

Query: 337  SCWIPRKVSGNLD-GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
                P+ V   +D G  +  ++CG  HT ++T  G + T G+G +G LG+G      +P 
Sbjct: 783  EQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPE 842

Query: 396  EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD------KGRL 449
             VE L   +T  V     H   +V+  D            GK+FTWG  +       G +
Sbjct: 843  PVE-LFDEKTNIVEVAAGHAFNLVLTQD------------GKIFTWGRNEQGQLGLGGGI 889

Query: 450  GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADG 508
                      P  V  L  + +  VA GH  S A+T  G +Y  G   + +  V  V +G
Sbjct: 890  SMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEG 949

Query: 509  LVPTRVDGEIAESFVEEVACGAYHVAALTSTS-KVYTWGKGANGQLGHGDKDNRNSPTLV 567
                          V +V CG  H A +T  + +++T+GKG++  LGHG +     P LV
Sbjct: 950  ------------DKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLV 997

Query: 568  -DFLKDKQVKRVVCGLNFTAII 588
             D L  + V +V CG    A+I
Sbjct: 998  ADGLAGRGVVKVACGHRHMAVI 1019



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 14/135 (10%)

Query: 234  LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            +P  VE+  +  V ++A G  H+  VT++GE++ WG +               PQ+  + 
Sbjct: 899  VPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIH-----------LEPQVFRVG 947

Query: 294  SGVNVELVACGEYHTCAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
             G  V  V CG  HT  VT     L+T+G G+  S  LGHG++     P+ V+  L G  
Sbjct: 948  EGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGS--SLCLGHGTRSYTPHPKLVADGLAGRG 1005

Query: 353  LSYISCGLWHTAVVT 367
            +  ++CG  H AV+T
Sbjct: 1006 VVKVACGHRHMAVIT 1020


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG  ++       P+ V P I   + QVACG   +V LT 
Sbjct: 206 ----TTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPV-PGIPGKVVQVACGGGHTVVLTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  ++  I +  +  +ACG  H A +T    +YT
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYT 318

Query: 545 WGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G +++ N   PTL        V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVTV---GKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  +   ++  +P+ V  + G +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 252 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETSVPKAIEHIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVE 524
           D+ I  +ACG + +  +T  G +YT G   +G+LG+ + +     +PT          V+
Sbjct: 294 DQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSN-FLRFIVQ 352

Query: 525 EVACGAYHVAALTS 538
            V+CG  H     +
Sbjct: 353 LVSCGGCHTLVFAT 366



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G  + N G LG GSK +   P  V   L    + + +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR-VSCGVWHTAAV 418
             HT V T  G ++  G  + G LG GD    S    +      R  + +S G   +AA+
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+
Sbjct: 156 --------------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGY 199

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +TT G +YT G    G+LG+P   + +  +P  V G   +  V +VACG  H   
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVV 257

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           LT  + VYT+G G  GQLG G      S P  ++ +KD+++  + CG N TA+I
Sbjct: 258 LTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 24/227 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +G+++++GE   G+LG   +  V+H  PQ +  + G  V+ VACG  HT  +T    +Y
Sbjct: 207 TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEKA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           T+G G +  G LG G+ +    +P+ +  ++    +S+I+CG  HTA++T  G ++TFGD
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFGD 321

Query: 378 GSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           G  G LG G   ST+  IP             VSCG  HT  +V AT
Sbjct: 322 GRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT--LVFAT 366


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  IACG  H++ ++K GE+F+WG+   G+LG GR  A +  PQ +E LSGV +  ++ G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A++ SG++Y+WG    + G LG G       P  +   LD   + +++CG  HTA
Sbjct: 211 KAHSMALSMSGNVYSWGRN--DLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGGSHTA 267

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T+ G +FTFG G +G LGH    +   PR V  L G R T+++CG  HT A V     
Sbjct: 268 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYV----- 322

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 323 --------SDLGKVFSFGSGKEGQLGNGGTHNQLIP 350



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+    + +H++  GA H ++++  G+ F +               + H +   IL 
Sbjct: 100 PACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQ 147

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             ++  +ACG+YH+ A+++ G+L+ WG   +  G LG G   +     +   +L G+ L 
Sbjct: 148 EKSIIQIACGDYHSLALSKGGELFAWGQNLH--GQLGVGRLFASIPTPQAVEHLSGVPLV 205

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G       P  +ETL   +   ++CG  H
Sbjct: 206 QISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSH 265

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T+ G +FT+G G  G+LGH   +  L P  V  L    + Q+
Sbjct: 266 TALL--------------TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQI 311

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLG 502
           ACG   ++A  +  G V++ GS   GQLG
Sbjct: 312 ACGRRHTLAYVSDLGKVFSFGSGKEGQLG 340



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    S   P+ VE L G+   ++S G  H
Sbjct: 154 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 213

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G  +   FP  +  L ++ +  +
Sbjct: 214 SMALSMS--------------GNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL 259

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACG   +  LTT G V+T G+  YGQLG       +  R+  E+A + V ++ACG  H  
Sbjct: 260 ACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTL 319

Query: 535 ALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           A  S   KV+++G G  GQLG+G   N+  P  +    ++++K
Sbjct: 320 AYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 362



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+       P+AVE    + +  I+
Sbjct: 158 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRLFASIPT---PQAVEHLSGVPLVQIS 208

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G       P LIE L    VE +ACG  HT  
Sbjct: 209 AGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTAL 268

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T  G ++T+G G Y  G LGH S  +   PR V+  L G  ++ I+CG  HT A V+  
Sbjct: 269 LTTDGLVFTFGAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRRHTLAYVSDL 325

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 326 GKVFSFGSGKEGQLGNGGTHNQLIP 350



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-----PE 461
           +++CG +H+ A+              +  G+LF WG    G+LG G    RLF     P+
Sbjct: 153 QIACGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG----RLFASIPTPQ 194

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
            V  L    + Q++ G   S+AL+ SG+VY+ G    GQLG+   DG   P+ ++  +  
Sbjct: 195 AVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDN 253

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT+   V+T+G G  GQLGH    N   P LV  L   +V ++ C
Sbjct: 254 QQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIAC 313

Query: 581 G 581
           G
Sbjct: 314 G 314



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE-IA 519
           +C+  L +++I Q+ACG   S+AL+  G ++  G   +GQLGV      +PT    E ++
Sbjct: 143 QCI--LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLS 200

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + +++ G  H  AL+ +  VY+WG+   GQLG G  D  + P+L++ L ++QV+ + 
Sbjct: 201 GVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 260

Query: 580 CGLNFTAII 588
           CG + TA++
Sbjct: 261 CGGSHTALL 269


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 226/487 (46%), Gaps = 59/487 (12%)

Query: 138 SYTEAANTNSRADSVSFSPSPLTNAFPDNS---------NDRSSAAETFRISLSSVVSSS 188
           S TE  N N +   +S + +PL   F  NS          +RS  ++  R      V+  
Sbjct: 22  SRTEGVNGNQK---ISGTGAPLVFVFGQNSYGELGLGDVQERSIPSQV-RFFDEMNVTQI 77

Query: 189 SHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHN 248
           + G+ H     +  +   G+ +  GF G G+   G + S  T    PK +ES   + + +
Sbjct: 78  AAGNEH-----IAVLTRNGDVLTVGFNGSGQLGHGNNKSIST----PKKIESLKNIRITH 128

Query: 249 I--ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
           I  A G  +  ++++ G++++ G  + G+LGHG ++++S P L++ L    V  V+C  Y
Sbjct: 129 ISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYY 188

Query: 307 HTCAVTR------SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           H+  VT+      +     +  G  ++G LG         P K+  +L+   +   +CGL
Sbjct: 189 HSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITP-KIIRSLNTRQVIQTACGL 247

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  VT  G +F+ G    G LGH D  S + P  +E+L+     + +CG +HT   +V
Sbjct: 248 HHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHT---LV 304

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEPRLFPECVAPLIDENICQVACGHD 479
             D+           G+++ +G  DKG+LG   + +  + P+ +   +  +  Q + G+ 
Sbjct: 305 RRDT-----------GEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQ 353

Query: 480 LSVALTTSGHVYTM-GSAAYGQLGVPVADGLVPT--------RVDGEIAESFVEEVACGA 530
             +    SG  +    S + G+ G  +  GL  +        +V     +  + ++ACG 
Sbjct: 354 NQLH---SGQEHNQPSSQSLGESGA-IMQGLAESNNLNNQQPQVQYLSKKVNISKIACGC 409

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           YH  AL  + +++T+G+G +GQLG G+ +++  P  V  L DK+V  +  G   T ++  
Sbjct: 410 YHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVK 469

Query: 591 HKWVSSV 597
            K V  +
Sbjct: 470 QKKVKGI 476



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 5/205 (2%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F +G    G LG GD + R  P  V    + N+ Q+A G++    LT +G V T+G   
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNG 100

Query: 498 YGQLGVPVADGL-VPTRVDG--EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
            GQLG      +  P +++    I  + +   A G  ++A ++   K+YT G    GQLG
Sbjct: 101 SGQLGHGNNKSISTPKKIESLKNIRITHISS-ANGCENLAIISQDGKLYTCGYNNYGQLG 159

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL-HKWVSSVDHSVCSSCHNPFGFRR 613
           HG + N ++PTLV  LKD QV  V C    + I+    +  S+   +V S   N  G   
Sbjct: 160 HGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLG 219

Query: 614 KRHNCYNCGLVFCKACSSRKSLKAA 638
           + H C+       ++ ++R+ ++ A
Sbjct: 220 QEHTCHEITPKIIRSLNTRQVIQTA 244


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG G   S   P  +   LD   + +++CG  H+A
Sbjct: 199 EAHSMALSMSGNVYSWGKNEF--GQLGLGHTESKDSPSLIEA-LDNQKVEFLACGGSHSA 255

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV----- 310

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 311 --------SDLGKVFSFGSGKDGQLGNGGTLDQLIP 338



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +            +  + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY------------DYSMKHLRSESILQ 135

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G K       ++  +L G+ L+
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 193

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G   S   P  +E L   +   ++CG  H
Sbjct: 194 QISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 254 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQI 299

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 300 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 146 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQIS 196

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG+   G+LG G       P LIE L    VE +ACG  H+  
Sbjct: 197 AGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSAL 256

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 257 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDL 313

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G  +   IP  V+ 
Sbjct: 314 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  +
Sbjct: 202 SMALSMS--------------GNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFL 247

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+  + V ++ACG +H 
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHT 306

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 307 LAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 35/225 (15%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H  +++S G  F + D S   L           R    L+  +  +++CG +H+ A+   
Sbjct: 108 HMLILSSDGKPFEY-DYSMKHL-----------RSESILQEKKIIQITCGDYHSLAL--- 152

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVAC 476
                      +  G+LF WG    G+LG G K    FP    P I E++      Q++ 
Sbjct: 153 -----------SKGGELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQISA 197

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           G   S+AL+ SG+VY+ G   +GQLG+   +      +   +    VE +ACG  H A L
Sbjct: 198 GEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           T    ++T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 302



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGV 190

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  VY+WGK   GQLG G  ++++SP+L++ L +++V+ + CG
Sbjct: 191 PLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250

Query: 582 LNFTAII 588
            + +A++
Sbjct: 251 GSHSALL 257


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 150/332 (45%), Gaps = 22/332 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V NI+    HA  VT+ GE+F+ G+ S    GHG     +  P  +E L G+  + VA G
Sbjct: 156 VINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATG 215

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              T  +TR G +YT G  T+  G LGHG  +    P+ +        +  I+ G  +T 
Sbjct: 216 LSFTVILTRDGQVYTCGSNTH--GQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTF 273

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVAT 422
            VT  G + +FG  +   LGHGD     +PR +++   R +   RVS G  H  A+    
Sbjct: 274 AVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 329

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G ++TWG G  G LGHGD+  +  PE +  L  +   QV      + 
Sbjct: 330 ----------DALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTF 379

Query: 483 ALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            LT  G V   G   +G LG      +D ++  RV   + + +V +++ G YH  A+T+ 
Sbjct: 380 VLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTNK 439

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             V+ +G     QLG         PT + F K
Sbjct: 440 GIVFGFGDNERAQLGQEYIRGCLKPTEIMFQK 471



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 168/356 (47%), Gaps = 30/356 (8%)

Query: 164 PDNSNDRSSAAETFRISLSSVVS-SSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           PD +   + +  +F  SLS V++ S+SH  A    +S G+VF  G+   N  L  G   V
Sbjct: 137 PDTTQCAAFSRVSFP-SLSRVINISASHNHAAFVTES-GEVFTCGD---NSSLCCGHGEV 191

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           G +  R      P  VE+   +    +A G    V++T+ G++++ G  + G+LGHG   
Sbjct: 192 GRTIFR------PMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTI 245

Query: 283 DVSHPQLIEILSG-VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
           D + P+LIE+  G   V  +A G  +T AVT  G ++++G  T  +  LGHG +    +P
Sbjct: 246 DRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCT--NFCLGHGDQHDELLP 303

Query: 342 RKV-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           R + S     IH+  +S G  H   + + GH++T+G G  GALGHGD    + P  + +L
Sbjct: 304 RAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSL 363

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW-GDGDKGRLGHGDKEPRLF 459
           +G    +V      T    V TD  S            F W G G  G L  G  +  + 
Sbjct: 364 KGQVAVQVCARKRKT---FVLTDEGSVVA---------FGWMGFGSLGFLDRGTSDKVMR 411

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRV 514
           P  +  L D  + Q++ G   +VA+T  G V+  G     QLG     G L PT +
Sbjct: 412 PRVLESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI 467



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 139/291 (47%), Gaps = 36/291 (12%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVS-GNLDGIHLSYISC 358
           VA G YHT  V    D   +  G+   G+LGHG   + C    +VS  +L    +  IS 
Sbjct: 107 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLS--RVINISA 161

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAA 417
              H A VT +G +FT GD S    GHG+   T   P +VE L+G+   +V+ G+  T  
Sbjct: 162 SHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFT-- 219

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVAC 476
           V++  D            G+++T G    G+LGHGD   R  P+ +        + Q+A 
Sbjct: 220 VILTRD------------GQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAA 267

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF------VEEVACG 529
           G   + A+T  G V++ GS     LG     D L+P  +     +SF      V  V+ G
Sbjct: 268 GASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAI-----QSFKRRNIHVVRVSAG 322

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             H  AL +   VYTWG+G  G LGHGD++++ SP L+  LK  QV   VC
Sbjct: 323 DEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKG-QVAVQVC 372


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 170/349 (48%), Gaps = 38/349 (10%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + VH ++CG  H+ +VT   +++ +G  + G+LG G ++ +S P  ++ L    V+L AC
Sbjct: 36  VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT   T  G++Y  G    N G LG G          +S       +  +S G   +
Sbjct: 95  GRNHTLVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTS 152

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A +T  G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V     
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV----- 205

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGD------KEPRLFPECVAPLIDENICQVACG 477
                    T+ G+L+ +G+ + G+LG  +      + P+L  E     I E + QVACG
Sbjct: 206 ---------TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE-----IPEKVIQVACG 251

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVA 534
            + +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A
Sbjct: 252 GEHTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
            +T    +YT+G G +G+LG G ++  N   PTL        VK V CG
Sbjct: 309 LITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ H+  VT +  LY +G  + N G LG GSK +   P  V   L    +   +CG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT V T  G+++  G  + G LG GD                R T      + +   + 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEE-------------RNTFHVISFFTSEHKIK 143

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  G+LF WGD  +G++G  +      P+ V   I + +  ++CG+  
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYH 201

Query: 481 SVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           S  +TT G +Y  G    G+LG+P   + +   P  V  EI E  ++ VACG  H   LT
Sbjct: 202 SAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLT 259

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
             + VYT+G G  GQLG G      S P +++ ++D+ +  + CG N TA+I
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 41/320 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           +CG  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ACGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +  +PT         
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCS-NFLRF 349

Query: 522 FVEEVACGAYHVAALTSTSK 541
            V+ VACG  H+    +  +
Sbjct: 350 IVKLVACGGCHMVVFAAPHR 369



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG + ++ 
Sbjct: 51  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AALT 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WG  + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 46/176 (26%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSL-GDVFIWGE------GIANGFLG-------------- 216
           ++++   VS  S G  H  F +  G+++++GE      G+ N  LG              
Sbjct: 185 QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK 244

Query: 217 ------GGEHRVG------YSFSRQTDALL-----------PKAVESTMALDVHNIACGA 253
                 GGEH V       Y+F       L           PK +E+     +  I+CG 
Sbjct: 245 VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGE 304

Query: 254 RHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYH 307
            H  L+T  G ++++G+   G+LG G E   +H  P L        V+LVACG  H
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  IACG  H++ ++K GE+F+WG+   G+LG GR  A +  PQ +E LSGV +  ++ G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A++ SG++Y+WG    + G LG G       P  +   LD   + +++CG  HTA
Sbjct: 168 KAHSMALSMSGNVYSWGRN--DLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGGSHTA 224

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T+ G +FTFG G +G LGH    +   PR V  L G R T+++CG  HT A V     
Sbjct: 225 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYV----- 279

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 280 --------SDLGKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 29/260 (11%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
           + +H++  GA H ++++  G+ F +               + H +   IL   ++  +AC
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 113

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+YH+ A+++ G+L+ WG   +  G LG G   +     +   +L G+ L  IS G  H+
Sbjct: 114 GDYHSLALSKGGELFAWGQNLH--GQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHS 171

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             ++ +G+++++G    G LG G       P  +ETL   +   ++CG  HTA +     
Sbjct: 172 MALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALL----- 226

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T+ G +FT+G G  G+LGH   +  L P  V  L    + Q+ACG   ++A
Sbjct: 227 ---------TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLA 277

Query: 484 LTTS-GHVYTMGSAAYGQLG 502
             +  G V++ GS   GQLG
Sbjct: 278 YVSDLGKVFSFGSGKEGQLG 297



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    S   P+ VE L G+   ++S G  H
Sbjct: 111 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 170

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G  +   FP  +  L ++ +  +
Sbjct: 171 SMALSMS--------------GNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL 216

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACG   +  LTT G V+T G+  YGQLG       +  R+  E+A + V ++ACG  H  
Sbjct: 217 ACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTL 276

Query: 535 ALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           A  S   KV+++G G  GQLG+G   N+  P  +    ++++K
Sbjct: 277 AYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 319



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+       P+AVE    + +  I+
Sbjct: 115 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRLFASIPT---PQAVEHLSGVPLVQIS 165

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G       P LIE L    VE +ACG  HT  
Sbjct: 166 AGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTAL 225

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T  G ++T+G G Y  G LGH S  +   PR V+  L G  ++ I+CG  HT A V+  
Sbjct: 226 LTTDGLVFTFGAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRRHTLAYVSDL 282

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 283 GKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-----PE 461
           +++CG +H+ A+              +  G+LF WG    G+LG G    RLF     P+
Sbjct: 110 QIACGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG----RLFASIPTPQ 151

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
            V  L    + Q++ G   S+AL+ SG+VY+ G    GQLG+   DG   P+ ++  +  
Sbjct: 152 AVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDN 210

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT+   V+T+G G  GQLGH    N   P LV  L   +V ++ C
Sbjct: 211 QQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIAC 270

Query: 581 G 581
           G
Sbjct: 271 G 271



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE-IA 519
           +C+  L +++I Q+ACG   S+AL+  G ++  G   +GQLGV      +PT    E ++
Sbjct: 100 QCI--LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLS 157

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + +++ G  H  AL+ +  VY+WG+   GQLG G  D  + P+L++ L ++QV+ + 
Sbjct: 158 GVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 217

Query: 580 CGLNFTAII 588
           CG + TA++
Sbjct: 218 CGGSHTALL 226


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 178/402 (44%), Gaps = 42/402 (10%)

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
           A T   +LS   + + +G + +  D+   V  WG+   +G LG G           TD+ 
Sbjct: 48  AVTLAQTLSVSPTVAQNGPSRDASDT---VLAWGDN-KDGELGDGT---------TTDSS 94

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            P AV+      +  IA G  H++ VT  G   +WG    G+LG G   D S P  +++ 
Sbjct: 95  TPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLP 154

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIH 352
           +G  V  +A G+ H+ AVT +G    WGD   + G LG G+      P  V  +L  G  
Sbjct: 155 AGTTVTAIAAGDDHSLAVTSAGTALAWGD--NDRGELGDGTTTRRDTPVDV--DLPAGTT 210

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           ++ I+ G+ H+  +TSAG + T+G  S G LG G    +S P  V+   G   T ++ G 
Sbjct: 211 VTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGS 270

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ AV              T+ G +  WG+   G+LG G       P  V       I 
Sbjct: 271 LHSLAV--------------TTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTIT 316

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVA 527
            +  G D S+A+T++G     G    GQLG    DG   T     IA +      V    
Sbjct: 317 AIDGGRDHSLAVTSAGSALAWGDNDDGQLG----DGTT-TNSSTPIAVNLPADTTVTATT 371

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
            G+ H  A+T+   +  WG  ++G+LG G   N ++P  V+ 
Sbjct: 372 AGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVNL 413



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 124/301 (41%), Gaps = 30/301 (9%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           D S   SS      +   + V++ + G  H     S G    WG+         GE   G
Sbjct: 139 DGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDR------GELGDG 192

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
            +  R T    P  V+      V  IA G  H++ +T  G + +WG  S G+LG G   D
Sbjct: 193 TTTRRDT----PVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTD 248

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
            S P  +++ +G  V  +A G  H+ AVT +G +  WG+   + G LG G+  +   P  
Sbjct: 249 SSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGN--NSDGQLGDGTTTNSSTPIA 306

Query: 344 VSGNLDG-IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           V  NL     ++ I  G  H+  VTSAG    +GD   G LG G   ++S P  V     
Sbjct: 307 V--NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPAD 364

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
              T  + G  H+ AV              T+ G +  WG+   GRLG G       P  
Sbjct: 365 TTVTATTAGSLHSLAV--------------TTAGTILAWGNNSDGRLGDGTTTNSSTPIA 410

Query: 463 V 463
           V
Sbjct: 411 V 411



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
             S G V  WG   ++G LG G           TD+  P AV+      V  IA G+ H+
Sbjct: 224 LTSAGTVLTWGLN-SDGQLGDGT---------TTDSSTPIAVDLPAGTTVTAIAAGSLHS 273

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           + VT  G I +WG  S G+LG G   + S P  + + +   +  +  G  H+ AVT +G 
Sbjct: 274 LAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGS 333

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC-GLWHTAVVTSAGHLFTF 375
              WGD   + G LG G+  +   P  V  NL        +  G  H+  VT+AG +  +
Sbjct: 334 ALAWGD--NDDGQLGDGTTTNSSTPIAV--NLPADTTVTATTAGSLHSLAVTTAGTILAW 389

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           G+ S G LG G   ++S P  V        T  + G  H+ A+V
Sbjct: 390 GNNSDGRLGDGTTTNSSTPIAVNLPADTTVTATTAGSAHSMALV 433



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST------SCGKLFTWGDGDKGR 448
           R   ++R  R  RV  G +  A  V    + S SP+ +       +   +  WGD   G 
Sbjct: 25  RAGRSVRAHRAGRVVTGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGE 84

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVAD 507
           LG G       P  V       I  +A GHD S+A+T++G     G+  +GQLG     D
Sbjct: 85  LGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGSTTD 144

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
              P  VD   A + V  +A G  H  A+TS      WG    G+LG G    R++P  V
Sbjct: 145 SSTPIAVD-LPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTPVDV 203

Query: 568 DFLKDKQVKRVVCGL 582
           D      V  +  G+
Sbjct: 204 DLPAGTTVTAIAAGI 218



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 63/159 (39%), Gaps = 12/159 (7%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           D +   SS      +  S+ +++   G  H     S G    WG+   +G LG G     
Sbjct: 295 DGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDN-DDGQLGDGT---- 349

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
                 T++  P AV       V     G+ H++ VT  G I +WG  S GRLG G   +
Sbjct: 350 -----TTNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTN 404

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCA-VTRSGDLYTWG 321
            S P  + + +   V     G  H+ A V    DL T G
Sbjct: 405 SSTPIAVNLPADTTVTATTAGSAHSMALVAPPPDLPTTG 443


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 196/455 (43%), Gaps = 75/455 (16%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           VV+  S G+ H     S G ++ WG G  NG LG G +R          +L P  V+  +
Sbjct: 253 VVTCCSAGAKHSMACTSDGTLWTWGHG-GNGRLGLGHNR---------GSLSPAVVDYIL 302

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             D+  +  G  H+  + +QG +++WG    GRLGHG + ++  P+ +E   GV V  VA
Sbjct: 303 DRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVA 362

Query: 303 CGEYHTCAVTRSGDLYTWGDGT---YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           CG +HT A+T  G ++ WG G    +  G  G G  V+  +P+ +S +++   L+ I+ G
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA--VPKHLS-DIEAAVLN-IAAG 418

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG----------LRTTRV- 408
            +H+A VT  G L  +G G    LGHGD  +   P+ V  LR           L  +R+ 
Sbjct: 419 PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLK 478

Query: 409 -------------SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DK 454
                        + G   ++  + + +   S     T  G ++ WG  D G+LG G D 
Sbjct: 479 REYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV 538

Query: 455 EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTR 513
           E   +           I ++ACG    +A+   G V+  G+   GQLG+ V      P  
Sbjct: 539 EEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAA 598

Query: 514 VDGEIAESFVEEVACGAYHVAALTST--------------SKVYTWGKGANGQLGHGDKD 559
           V    A     +V CG  + A +TS                 ++ WG   +G+LG G+  
Sbjct: 599 V---TALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDV 655

Query: 560 NRNS---PTLVDF-----------LKDKQVKRVVC 580
              S   P  V F           L+ +  KRV C
Sbjct: 656 ASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFC 690



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 179/419 (42%), Gaps = 74/419 (17%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F WG+  +N    G E R         + + P  V     +    ++CG  ++ ++ K+
Sbjct: 70  LFGWGKNYSNVLGMGVEIR---------ERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKR 120

Query: 263 -----GEIFSWGEESGGRLGH---------GREADVS-------------HPQLIEILSG 295
                G+++++G  + GRLG+         G + D S              P  +     
Sbjct: 121 AQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDK 180

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-------SGN- 347
             +  ++CG  HT A++  G LY WG G+Y  G LG G     + P +V       SG  
Sbjct: 181 CKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYTPVRVYLGSEAGSGKK 238

Query: 348 ----------LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
                      D + ++  S G  H+   TS G L+T+G G  G LG G +  +  P  V
Sbjct: 239 KENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVV 298

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           + +       V+ G  H+A +                 G L+TWG G  GRLGHGD+   
Sbjct: 299 DYILDRDIVFVNAGDSHSACI--------------DRQGVLYTWGSGGFGRLGHGDQGEI 344

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA---AYGQLGVPVADGLVPTRV 514
             P  V       + QVACG   ++ALT  G V+  G+     +G+ G   + G+V    
Sbjct: 345 PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE-GEDGSGGMVAVPK 403

Query: 515 DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
                E+ V  +A G YH AA+T    +  WG G + +LGHGD+ N+  P  V  L+++
Sbjct: 404 HLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNR 462



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 183/463 (39%), Gaps = 108/463 (23%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            D  G ++ WG G   G LG G+         Q +  +P+ VE    + V  +ACG  H 
Sbjct: 319 IDRQGVLYTWGSG-GFGRLGHGD---------QGEIPVPRKVEGFGGVPVLQVACGTFHT 368

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--VACGEYHTCAVTRS 314
           + +T +G +F+WG       G G +       + + LS +   +  +A G YH+ AVT  
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVG 428

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS------------------------GNLDG 350
           GDL  WG G   S  LGHG + +   P+ V+                         +LD 
Sbjct: 429 GDLLVWGVG--GSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 351 IH-------------LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PR 395
           +              L  + CG  HT  +T AG ++ +G    G LG G+ +      P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++E        R++CG  H  AV                 G +F WG  D G+LG G   
Sbjct: 547 KLECFS-TPIRRIACGSKHCLAV--------------AQYGDVFAWGANDNGQLGLGVVR 591

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTT--------------SGHVYTMGSAAYGQL 501
           P   P  V  L       V CG D S  +T+               G ++  G+A  G+L
Sbjct: 592 PSFEPAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKL 649

Query: 502 GV--PVADG--LVPTRV-----------DGEIAESFVEEVAC--------GAYHVAALTS 538
           G+   VA G  L P +V           D    +++ + V C        G  H  A+T+
Sbjct: 650 GLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY-KRVFCVSFSPLCSGTSHSLAITA 708

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             + Y WG G  G+LG G   N  +PT  DF K  +++ V  G
Sbjct: 709 QGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 136/346 (39%), Gaps = 68/346 (19%)

Query: 297 NVELVACGEYHTCAVTRSGD---LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +V+ VA G YHT  V   GD   L+ WG    N  +LG G ++   +   +      +  
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104

Query: 354 SYISCGLWHTAVVTS-----AGHLFTFGDGSFGALGH----------------------G 386
             +SCG  ++AV+        G ++TFG G+ G LG+                      G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
               T  P  V      +  R+SCG  HT A+              +  G L+ WG G  
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLAL--------------SDEGALYAWGVGSY 210

Query: 447 GRLGHGDKEPRLFP-------ECVAPLIDENI---------CQVAC---GHDLSVALTTS 487
           G LG GD      P       E  +    EN+           V C   G   S+A T+ 
Sbjct: 211 GNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSD 270

Query: 488 GHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G ++T G    G+LG+    G L P  VD  I +  +  V  G  H A +     +YTWG
Sbjct: 271 GTLWTWGHGGNGRLGLGHNRGSLSPAVVD-YILDRDIVFVNAGDSHSACIDRQGVLYTWG 329

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            G  G+LGHGD+     P  V+      V +V CG  F  +   HK
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACG-TFHTLALTHK 374



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 113/269 (42%), Gaps = 36/269 (13%)

Query: 200 LGDVFIWGEGIANGFLGGGE----------HRVGYSF---SRQTDALLPKAVESTMALDV 246
            GD++ WG    +G LG GE           +V +S    +   D+L  +A +    +  
Sbjct: 635 FGDLWAWGAA-ESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSF 693

Query: 247 HNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
             +  G  H++ +T QGE ++WG    GRLG G  A+   P   +   GV +  VA G  
Sbjct: 694 SPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGAC 753

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H+ A++  GDL+ WG          +   +S  I  ++ G      +  IS    H+  V
Sbjct: 754 HSLALSMDGDLWFWGRREDTCSTTNY---MSPRIFMQLEGQGGVPKVKSISASERHSLAV 810

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T AG +F +GD      G G        R+ E L   R  RV       A +  A    +
Sbjct: 811 TEAGEVFAWGDNKLYQTGCGK-------RQAERLD--RPERV-------AGLPSACQWVA 854

Query: 427 SSPSGS---TSCGKLFTWGDGDKGRLGHG 452
           + P GS    + G++F  G    GRLG G
Sbjct: 855 TGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 147/373 (39%), Gaps = 85/373 (22%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           E F   +  +   S H  A   +   GDVF WG    NG LG G  R  +          
Sbjct: 549 ECFSTPIRRIACGSKHCLAVAQY---GDVFAWGAN-DNGQLGLGVVRPSFE--------- 595

Query: 235 PKAVEST-MALDVHNIACGARHAVLVT--------------KQGEIFSWGEESGGRLGHG 279
           P AV +   A+DV    CG  ++  +T              + G++++WG    G+LG G
Sbjct: 596 PAAVTALRQAVDVF---CGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 280 RE---ADVSHPQLIEILSGVNVELVAC-----------------------GEYHTCAVTR 313
            +     +  PQ +      +V + AC                       G  H+ A+T 
Sbjct: 653 EDVASGSILTPQKVVF----SVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITA 708

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G+ Y WG G Y  G LG G+  + + P +      G+ L  ++ G  H+  ++  G L+
Sbjct: 709 QGECYAWGAGYY--GRLGIGTTANAYTPTRCD-FPKGVRLRSVAAGACHSLALSMDGDLW 765

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            +G          +++S  I  ++E   G+ +   +S    H+ AV              
Sbjct: 766 FWGRRE-DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAV-------------- 810

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLF--PECVAPLIDENICQ-VACGHDLSVALTTSGH 489
           T  G++F WGD    + G G ++      PE VA L   + CQ VA G   S  +  SG 
Sbjct: 811 TEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFILASGE 868

Query: 490 VYTMGSAAYGQLG 502
           V+  G    G+LG
Sbjct: 869 VFAAGVIKSGRLG 881


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 125/217 (57%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+   G+LG GR  A  S P+++E LSGV +  ++ 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE H+ A++ SG++Y+WG    + G LG G   +   P  +   LD   + +++CG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKDSPSCIEA-LDDQKVEFLACGGSHT 269

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T +G +FTFGDG +G LGH    +   P  V  L G R T+++CG  HT A V    
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYV---- 325

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                    +  GK+F++G G +G+LG+G    +L P
Sbjct: 326 ---------SDMGKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  G  H ++++  G+ F +            +  + H +   IL 
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 150

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  + CG+YH+ A+++ G+L+ WG      G LG G   +     ++  NL G+ L 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWGQNL--DGQLGVGRIFASTSTPEIVENLSGVPLV 208

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G    G LG G   +   P  +E L   +   ++CG  H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSH 268

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+GDG  G+LGH   +  L P  VA L+   + Q+
Sbjct: 269 TALL--------------TKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQI 314

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLG 502
           ACG   ++A  +  G V++ GS   GQLG
Sbjct: 315 ACGRQHTLAYVSDMGKVFSFGSGKEGQLG 343



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 18/212 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    STS P  VE L G+   ++S G  H
Sbjct: 157 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 216

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G    +  P C+  L D+ +  +
Sbjct: 217 SMALSMS--------------GNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFL 262

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT SG V+T G   YGQLG     + L P  V G +    V ++ACG  H 
Sbjct: 263 ACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNR-VTQIACGRQHT 321

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
            A  S   KV+++G G  GQLG+G   N+  P
Sbjct: 322 LAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 18/209 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F+  +    P+ VE+   + +  I+
Sbjct: 161 DYHSLALSKGGELFAWGQNL-DGQLG-----VGRIFASTST---PEIVENLSGVPLVQIS 211

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G ++SWG    G+LG G   +   P  IE L    VE +ACG  HT  
Sbjct: 212 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTAL 271

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+SG ++T+GDG Y  G LGH S  +   P  V+G L G  ++ I+CG  HT A V+  
Sbjct: 272 LTKSGLVFTFGDGKY--GQLGHNSTQNELRPCLVAG-LVGNRVTQIACGRQHTLAYVSDM 328

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVE 398
           G +F+FG G  G LG+G   +  +PR ++
Sbjct: 329 GKVFSFGSGKEGQLGNGGTCNQLMPRPMK 357



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 25/185 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G    R+F     P 
Sbjct: 156 QITCGDYHSLAL--------------SKGGELFAWGQNLDGQLGVG----RIFASTSTPE 197

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAE 520
           I EN+      Q++ G   S+AL+ SG+VY+ G    GQLG+    +   P+ ++  + +
Sbjct: 198 IVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEA-LDD 256

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT +  V+T+G G  GQLGH    N   P LV  L   +V ++ C
Sbjct: 257 QKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIAC 316

Query: 581 GLNFT 585
           G   T
Sbjct: 317 GRQHT 321



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 9/132 (6%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAE 520
           +C+  L ++NI Q+ CG   S+AL+  G ++  G    GQLGV     +  +    EI E
Sbjct: 146 QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV---GRIFASTSTPEIVE 200

Query: 521 SF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           +     + +++ G  H  AL+ +  VY+WG+   GQLG G   N++SP+ ++ L D++V+
Sbjct: 201 NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVE 260

Query: 577 RVVCGLNFTAII 588
            + CG + TA++
Sbjct: 261 FLACGGSHTALL 272


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 196/455 (43%), Gaps = 75/455 (16%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           +V+  S G+ H     S G ++ WG G  NG LG G +R          +L P  V+  +
Sbjct: 253 IVTCCSAGAKHSMACTSDGTLWTWGHG-GNGRLGLGHNR---------GSLSPAVVDYIL 302

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             D+  +  G  H+  + +QG +++WG    GRLGHG + ++  P+ +E   GV V  VA
Sbjct: 303 DRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVA 362

Query: 303 CGEYHTCAVTRSGDLYTWGDGT---YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           CG +HT A+T  G ++ WG G    +  G  G G  V+  +P+ +S +++   L+ I+ G
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA--VPKHLS-DIEAAVLN-IAAG 418

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG----------LRTTRV- 408
            +H+A VT  G L  +G G    LGHGD  +   P+ V  LR           L  +R+ 
Sbjct: 419 PYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLK 478

Query: 409 -------------SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DK 454
                        + G   ++  + + +   S     T  G ++ WG  D G+LG G D 
Sbjct: 479 REYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV 538

Query: 455 EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTR 513
           E   +           I ++ACG    +A+   G V+  G+   GQLG+ V      P  
Sbjct: 539 EEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAA 598

Query: 514 VDGEIAESFVEEVACGAYHVAALTST--------------SKVYTWGKGANGQLGHGDKD 559
           V    A     +V CG  + A +TS                 ++ WG   +G+LG G+  
Sbjct: 599 V---TALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDV 655

Query: 560 NRNS---PTLVDF-----------LKDKQVKRVVC 580
              S   P  V F           L+ +  KRV C
Sbjct: 656 ASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFC 690



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 179/419 (42%), Gaps = 74/419 (17%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +F WG+  +N    G E R         + + P  V     +    ++CG  ++ ++ K+
Sbjct: 70  LFGWGKNYSNVLGMGVEIR---------ERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKR 120

Query: 263 -----GEIFSWGEESGGRLGH---------GREADVS-------------HPQLIEILSG 295
                G+++++G  + GRLG+         G + D S              P  +     
Sbjct: 121 AQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDK 180

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-------SGN- 347
             +  ++CG  HT A++  G LY WG G+Y  G LG G     + P +V       SG  
Sbjct: 181 CKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYTPVRVYLGSEAGSGKK 238

Query: 348 ----------LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
                      D + ++  S G  H+   TS G L+T+G G  G LG G +  +  P  V
Sbjct: 239 KENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVV 298

Query: 398 ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
           + +       V+ G  H+A +                 G L+TWG G  GRLGHGD+   
Sbjct: 299 DYILDRDIVFVNAGDSHSACI--------------DRQGVLYTWGSGGFGRLGHGDQGEI 344

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA---AYGQLGVPVADGLVPTRV 514
             P  V       + QVACG   ++ALT  G V+  G+     +G+ G   + G+V    
Sbjct: 345 PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE-GEDGSGGMVAVPK 403

Query: 515 DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
                E+ V  +A G YH AA+T    +  WG G + +LGHGD+ N+  P  V  L+++
Sbjct: 404 HLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNR 462



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 183/463 (39%), Gaps = 108/463 (23%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            D  G ++ WG G   G LG G+         Q +  +P+ VE    + V  +ACG  H 
Sbjct: 319 IDRQGVLYTWGSG-GFGRLGHGD---------QGEIPVPRKVEGFGGVPVLQVACGTFHT 368

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--VACGEYHTCAVTRS 314
           + +T +G +F+WG       G G +       + + LS +   +  +A G YH+ AVT  
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVG 428

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS------------------------GNLDG 350
           GDL  WG G   S  LGHG + +   P+ V+                         +LD 
Sbjct: 429 GDLLVWGVG--GSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 351 IH-------------LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PR 395
           +              L  + CG  HT  +T AG ++ +G    G LG G+ +      P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           ++E        R++CG  H  AV                 G +F WG  D G+LG G   
Sbjct: 547 KLECFS-TPIRRIACGSKHCLAV--------------AQYGDVFAWGANDNGQLGLGVVR 591

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTT--------------SGHVYTMGSAAYGQL 501
           P   P  V  L       V CG D S  +T+               G ++  G+A  G+L
Sbjct: 592 PSFEPAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKL 649

Query: 502 GV--PVADG--LVPTRV-----------DGEIAESFVEEVAC--------GAYHVAALTS 538
           G+   VA G  L P +V           D    +++ + V C        G  H  A+T+
Sbjct: 650 GLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY-KRVFCVSFSPLCSGTSHSLAITA 708

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             + Y WG G  G+LG G   N  +PT  DF K  +++ V  G
Sbjct: 709 QGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 136/346 (39%), Gaps = 68/346 (19%)

Query: 297 NVELVACGEYHTCAVTRSGD---LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +V+ VA G YHT  V   GD   L+ WG    N  +LG G ++   +   +      +  
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104

Query: 354 SYISCGLWHTAVVTS-----AGHLFTFGDGSFGALGH----------------------G 386
             +SCG  ++AV+        G ++TFG G+ G LG+                      G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
               T  P  V      +  R+SCG  HT A+              +  G L+ WG G  
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLAL--------------SDEGALYAWGVGSY 210

Query: 447 GRLGHGDKEPRLFP-------ECVAPLIDENI---------CQVAC---GHDLSVALTTS 487
           G LG GD      P       E  +    EN+           V C   G   S+A T+ 
Sbjct: 211 GNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSD 270

Query: 488 GHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G ++T G    G+LG+    G L P  VD  I +  +  V  G  H A +     +YTWG
Sbjct: 271 GTLWTWGHGGNGRLGLGHNRGSLSPAVVD-YILDRDIVFVNAGDSHSACIDRQGVLYTWG 329

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            G  G+LGHGD+     P  V+      V +V CG  F  +   HK
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACG-TFHTLALTHK 374



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 113/269 (42%), Gaps = 36/269 (13%)

Query: 200 LGDVFIWGEGIANGFLGGGE----------HRVGYSF---SRQTDALLPKAVESTMALDV 246
            GD++ WG    +G LG GE           +V +S    +   D+L  +A +    +  
Sbjct: 635 FGDLWAWGAA-ESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSF 693

Query: 247 HNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
             +  G  H++ +T QGE ++WG    GRLG G  A+   P   +   GV +  VA G  
Sbjct: 694 SPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGAC 753

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           H+ A++  GDL+ WG          +   +S  I  ++ G      +  IS    H+  V
Sbjct: 754 HSLALSMDGDLWFWGRREDTCSTTNY---MSPRIFMQLEGQGGVPKVKSISASERHSLAV 810

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T AG +F +GD      G G        R+ E L   R  RV       A +  A    +
Sbjct: 811 TEAGEVFAWGDNKLYQTGCGK-------RQAERLD--RPERV-------AGLPSACQWVA 854

Query: 427 SSPSGS---TSCGKLFTWGDGDKGRLGHG 452
           + P GS    + G++F  G    GRLG G
Sbjct: 855 TGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 147/373 (39%), Gaps = 85/373 (22%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           E F   +  +   S H  A   +   GDVF WG    NG LG G  R  +          
Sbjct: 549 ECFSTPIRRIACGSKHCLAVAQY---GDVFAWGAN-DNGQLGLGVVRPSFE--------- 595

Query: 235 PKAVEST-MALDVHNIACGARHAVLVT--------------KQGEIFSWGEESGGRLGHG 279
           P AV +   A+DV    CG  ++  +T              + G++++WG    G+LG G
Sbjct: 596 PAAVTALRQAVDVF---CGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 280 RE---ADVSHPQLIEILSGVNVELVAC-----------------------GEYHTCAVTR 313
            +     +  PQ +      +V + AC                       G  H+ A+T 
Sbjct: 653 EDVASGSILTPQKVVF----SVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITA 708

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G+ Y WG G Y  G LG G+  + + P +      G+ L  ++ G  H+  ++  G L+
Sbjct: 709 QGECYAWGAGYY--GRLGIGTTANAYTPTRCD-FPKGVRLRSVAAGACHSLALSMDGDLW 765

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
            +G          +++S  I  ++E   G+ +   +S    H+ AV              
Sbjct: 766 FWGRRE-DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAV-------------- 810

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLF--PECVAPLIDENICQ-VACGHDLSVALTTSGH 489
           T  G++F WGD    + G G ++      PE VA L   + CQ VA G   S  +  SG 
Sbjct: 811 TEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFILASGE 868

Query: 490 VYTMGSAAYGQLG 502
           V+  G    G+LG
Sbjct: 869 VFAAGVIKSGRLG 881


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 179/413 (43%), Gaps = 54/413 (13%)

Query: 140 TEAANTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDS 199
           +  AN ++   S S SP+P       N N   +  E   + +S        G  H     
Sbjct: 72  SPVANLHALPSSFSLSPTP-GQLLIKNQNSTITKQEAIEVGISC-------GLFHSALLV 123

Query: 200 LGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHN-IACGARHAVL 258
            G+++IWG+G   G LG         F  +    +P    +   LD    +A G  H+V 
Sbjct: 124 DGNIWIWGKG-DGGRLG---------FGHENPVFVPTLNPN---LDPAKCVALGGVHSVA 170

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T  G++F+WG    G LGH        P+L++ +S   +  +A    HT A+T +G++Y
Sbjct: 171 LTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVY 230

Query: 319 TWG-------DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           TWG        G         G  +S  IP KV      + ++ + CG + TAV+T  G 
Sbjct: 231 TWGRDEGDGRLGLGPGRGPNEGGGLS--IPSKVKALT--VPVAAVFCGGFFTAVLTEEGQ 286

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++ +G  S   LG G+      P+ +  L G+R  +++ G +H+ A+             
Sbjct: 287 IWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLAL------------- 333

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  GK+ +WG G  G+LGH   + +  P  +  L D+ +  +ACG   S A+T  G +Y
Sbjct: 334 -TDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLY 392

Query: 492 TMGSAAYGQLGVPVADGLVPTRV-------DGEIAESFVEEVACGAYHVAALT 537
             G+A   QLGVP    + P  V       D  +    V  VA GA H   L 
Sbjct: 393 MWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLV 445



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 202/441 (45%), Gaps = 60/441 (13%)

Query: 168 NDRSSAAETFRISLSS-------VVSSSSHGSAHEDFDSLG-DVFIWGEGIANGFLGGG- 218
           + R +A+ T RIS SS       ++  +   + H   DS+   +  WG G ++G LGGG 
Sbjct: 6   HQRFTASLTRRISTSSPNKNKLPILYKTPEINDHNRNDSVTLQLLSWGRG-SSGQLGGGI 64

Query: 219 -EHRV-------------GYSFSRQTDALLPKAVESTM----ALDVHNIACGARHAVLVT 260
            E R+              +S S     LL K   ST+    A++V  I+CG  H+ L+ 
Sbjct: 65  EETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEAIEV-GISCGLFHSALLV 123

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+ WG+  GGRLG G E  V  P L   L     + VA G  H+ A+T  G ++TW
Sbjct: 124 -DGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLD--PAKCVALGGVHSVALTSLGQVFTW 180

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---- 376
           G G +  G LGH       +PR V G +    + +I+    HTA +T  G ++T+G    
Sbjct: 181 GYGGF--GALGHCVYHRELLPRLVQG-ISNEKIRHIATSGTHTAAITETGEVYTWGRDEG 237

Query: 377 ---DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
               G     G  +    SIP +V+ L  +    V CG + TA +              T
Sbjct: 238 DGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVFCGGFFTAVL--------------T 282

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G+++ WG      LG G+K     P+ +  L    + Q+A G   S+ALT  G V + 
Sbjct: 283 EEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSW 342

Query: 494 GSAAYGQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G   +GQLG P + +  +P  +D  +A+  V  +ACG    AA+T   K+Y WG   + Q
Sbjct: 343 GFGGHGQLGHPSIQNQKIPMVID-ALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQ 401

Query: 553 LG-HGDKDNRNSPTLVDFLKD 572
           LG  G  + +  P  V FL +
Sbjct: 402 LGVPGLPEVQPCPVEVVFLME 422


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 154/335 (45%), Gaps = 22/335 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V NI+    HA  VT+ GE+F+ G+ S    GHG     +  P  I+ L G++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              T  +T  G +YT G  T+  G LGHG  +    P+ V        +  ++ G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTF 274

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVAT 422
            VT  G +++FG  +   LGHGD      PR +++   R +   RVS G  H  A+    
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 330

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G ++TWG G  G LGHGD+  +  PE ++ L  +   QV      + 
Sbjct: 331 ----------DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTF 380

Query: 483 ALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            LT  G V+  G   +G LG P    +D ++  RV   + + +V +++ G YH  A+T+ 
Sbjct: 381 VLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNR 440

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ 574
             V+ +G     QLG         PT + F K  +
Sbjct: 441 GIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSME 475



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 168/359 (46%), Gaps = 38/359 (10%)

Query: 180 SLSSVVS-SSSHGSAHEDF-DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           SLS VV+ S+SH   H  F   LG+VF  G+   N  L  G   VG +  R      P  
Sbjct: 153 SLSRVVNISASHN--HAAFVTELGEVFTCGD---NSSLCCGHGEVGRTIFR------PTE 201

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +++   +    +A G    V++T  G++++ G  + G+LGHG   D + P+++E+  G+ 
Sbjct: 202 IKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLA 261

Query: 298 -VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSY 355
            V  VA G  +T AVT  G +Y++G  T  +  LGHG +     PR + S     IH+  
Sbjct: 262 PVVQVAAGASYTFAVTDDGTVYSFGSCT--NFCLGHGDQHDELRPRAIQSFKRRNIHVVR 319

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H   + + G+++T+G G  GALGHGD    + P  + +L+     +V      T
Sbjct: 320 VSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKT 379

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK---EPRLFPECVAPLIDENIC 472
               V TD            G +F +G    G LG  D+   +  + P  +  L D  + 
Sbjct: 380 ---FVLTDE-----------GSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGA 530
           Q++ G   +VA+T  G V+  G     QLG     G L PT +   + +  +EE+   A
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEIVIAA 481



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 138/291 (47%), Gaps = 36/291 (12%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVS-GNLDGIHLSYISC 358
           VA G YHT  V    D   +  G+   G+LGHG   + C    +V   +L    +  IS 
Sbjct: 108 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISA 162

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAA 417
              H A VT  G +FT GD S    GHG+   T   P E++ L+G+   +V+ G+  T  
Sbjct: 163 SHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFT-- 220

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV------APLIDENI 471
           V++ TD            G+++T G    G+LGHGD   R  P+ V      AP++    
Sbjct: 221 VILTTD------------GQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVV---- 264

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF-VEEVACG 529
            QVA G   + A+T  G VY+ GS     LG     D L P  +      +  V  V+ G
Sbjct: 265 -QVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAG 323

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             H  AL +   VYTWG+G  G LGHGD++++ SP L+  LK  QV   VC
Sbjct: 324 DEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ++F+     VV  S+        D+LG V+ WG G   G LG G+         +
Sbjct: 303 RPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYC-GALGHGD---------E 352

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D   P+ + S  +     +    R   ++T +G +F++G    G LG    G    V  
Sbjct: 353 NDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMR 412

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           P++++ L    V  ++ G YHT AVT  G ++ +GD
Sbjct: 413 PRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGD 448


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 154/335 (45%), Gaps = 22/335 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V NI+    HA  VT+ GE+F+ G+ S    GHG     +  P  I+ L G++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              T  +T  G +YT G  T+  G LGHG  +    P+ V        +  ++ G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTF 274

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVAT 422
            VT  G +++FG  +   LGHGD      PR +++   R +   RVS G  H  A+    
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 330

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G ++TWG G  G LGHGD+  +  PE ++ L  +   QV      + 
Sbjct: 331 ----------DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTF 380

Query: 483 ALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            LT  G V+  G   +G LG P    +D ++  RV   + + +V +++ G YH  A+T+ 
Sbjct: 381 VLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNR 440

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ 574
             V+ +G     QLG         PT + F K  +
Sbjct: 441 GIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSME 475



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 168/359 (46%), Gaps = 38/359 (10%)

Query: 180 SLSSVVS-SSSHGSAHEDF-DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           SLS VV+ S+SH   H  F   LG+VF  G+   N  L  G   VG +  R      P  
Sbjct: 153 SLSRVVNISASHN--HAAFVTELGEVFTCGD---NSSLCCGHGEVGRTIFR------PTE 201

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +++   +    +A G    V++T  G++++ G  + G+LGHG   D + P+++E+  G+ 
Sbjct: 202 IKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLA 261

Query: 298 -VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSY 355
            V  VA G  +T AVT  G +Y++G  T  +  LGHG +     PR + S     IH+  
Sbjct: 262 PVVQVAAGASYTFAVTDDGTVYSFGSCT--NFCLGHGDQHDELRPRAIQSFKRRNIHVVR 319

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +S G  H   + + G+++T+G G  GALGHGD    + P  + +L+     +V      T
Sbjct: 320 VSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKT 379

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK---EPRLFPECVAPLIDENIC 472
               V TD            G +F +G    G LG  D+   +  + P  +  L D  + 
Sbjct: 380 ---FVLTDE-----------GSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGA 530
           Q++ G   +VA+T  G V+  G     QLG     G L PT +   + +  +EE+   A
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEIVIAA 481



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 140/296 (47%), Gaps = 46/296 (15%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVS-GNLDGIHLSYISC 358
           VA G YHT  V    D   +  G+   G+LGHG   + C    +V   +L    +  IS 
Sbjct: 108 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISA 162

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAA 417
              H A VT  G +FT GD S    GHG+   T   P E++ L+G+   +V+ G+  T  
Sbjct: 163 SHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFT-- 220

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV------APLIDENI 471
           V++ TD            G+++T G    G+LGHGD   R  P+ V      AP++    
Sbjct: 221 VILTTD------------GQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVV---- 264

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF------VE 524
            QVA G   + A+T  G VY+ GS     LG     D L P  +     +SF      V 
Sbjct: 265 -QVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAI-----QSFKRRNIHVV 318

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
            V+ G  H  AL +   VYTWG+G  G LGHGD++++ SP L+  LK  QV   VC
Sbjct: 319 RVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ++F+     VV  S+        D+LG V+ WG G   G LG G+         +
Sbjct: 303 RPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYC-GALGHGD---------E 352

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D   P+ + S  +     +    R   ++T +G +F++G    G LG    G    V  
Sbjct: 353 NDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMR 412

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           P++++ L    V  ++ G YHT AVT  G ++ +GD
Sbjct: 413 PRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGD 448


>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Acromyrmex echinatior]
          Length = 2956

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 181/414 (43%), Gaps = 65/414 (15%)

Query: 187  SSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV--ESTMAL 244
            S S G +H      G+++ WG  +  G LG G   + Y          P A+    +M +
Sbjct: 1895 SLSTGFSHVALVRNGNIYTWGSSVQ-GCLGTGSSVLRYG--------TPHAICFFKSMKI 1945

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            +V +++CG  H + VT  G I++WG    G+LG G+    S P+L+  L+   +     G
Sbjct: 1946 EVFSVSCGHCHTLAVTNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAG 2004

Query: 305  EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +YH+ A+T  G ++TWG G +  G LGHG+     IP  V   L GI +  IS G  HT 
Sbjct: 2005 QYHSVALTADGRIFTWGWGVH--GQLGHGNTDEKAIPSLVKA-LLGIVVCCISAGYAHTL 2061

Query: 365  VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
             ++  G L+ FG    G LG GD+I +S+P +V      R T +S G +H  AV      
Sbjct: 2062 ALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKVSLPD--RITLISTGYFHNLAV------ 2113

Query: 425  SSSSPSGSTSCGKLFTWG----------------------DGDKGR---LGHGDKEP--- 456
                    ++  KL+ WG                      D ++ R   LG  +K P   
Sbjct: 2114 --------SNTNKLYIWGASPQVLRLQAQAQKKIRISEQQDANEKRNKALGELEKIPSDA 2165

Query: 457  -RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG----LVP 511
              L  +    L  ++  Q    H  +  + T     T  +A        + +     L P
Sbjct: 2166 TNLNGKIKEFLNKKDGVQTKSSHTETSDIETQKKFET-KNAHLKDFNFDLIEESQTHLKP 2224

Query: 512  TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
              VD  + +  + +++ G +H A +T    +YTWG+  +GQ+G+G +     PT
Sbjct: 2225 CIVDTSLVKGQINQISVGCHHNALITKDGSLYTWGRNLDGQIGNGTRREVLIPT 2278



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 6/139 (4%)

Query: 436  GKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            G ++TWG   +G LG G    R       C    +   +  V+CGH  ++A+T +G +Y 
Sbjct: 1909 GNIYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYA 1967

Query: 493  MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             G++ +GQLG+  V     P  V     E  V+ VA G YH  ALT+  +++TWG G +G
Sbjct: 1968 WGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVA-GQYHSVALTADGRIFTWGWGVHG 2026

Query: 552  QLGHGDKDNRNSPTLVDFL 570
            QLGHG+ D +  P+LV  L
Sbjct: 2027 QLGHGNTDEKAIPSLVKAL 2045



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 94/216 (43%), Gaps = 21/216 (9%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTT--RVSCGV 412
            +S G  H A+V + G+++T+G    G LG G  +     P  +   + ++     VSCG 
Sbjct: 1896 LSTGFSHVALVRN-GNIYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGH 1954

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             HT AV              T+ G ++ WG    G+LG G       PE V  L  E I 
Sbjct: 1955 CHTLAV--------------TNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIV 1999

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAY 531
                G   SVALT  G ++T G   +GQLG    D   +P+ V   +    V  ++ G  
Sbjct: 2000 DAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEKAIPSLVKALLG-IVVCCISAGYA 2058

Query: 532  HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
            H  AL+    +Y +G    GQLG GD    + P  V
Sbjct: 2059 HTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKV 2094



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-------VEEVACGAYHVA 534
            VAL  +G++YT GS+  G LG     G    R     A  F       V  V+CG  H  
Sbjct: 1903 VALVRNGNIYTWGSSVQGCLGT----GSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTL 1958

Query: 535  ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            A+T+   +Y WG    GQLG G     +SP LV  L  + +   V G
Sbjct: 1959 AVTNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAG 2004


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 178/395 (45%), Gaps = 32/395 (8%)

Query: 191 GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           G  H    S G V+  G  +  G LG G        S  T  +    +    ++ V  ++
Sbjct: 119 GRYHTLLISNGSVYSCGSSLC-GVLGHG--------SETTQCVTFTRINFPPSIYVEQVS 169

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGH-GREADVSHPQLIEILSGVNVELVACGEYHTC 309
               HA  VT+ G++F+ G+ S    GH      +  P+L+E L+G+  + V+ G   + 
Sbjct: 170 ASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSV 229

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            +TR G +YT G  TY  G LGHG+ +    P+ V   ++   +  I+ G  +   V + 
Sbjct: 230 FLTRQGHVYTCGTNTY--GQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVND 287

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSSSS 427
           G +++FG GS   LGHG+  +   PR ++T R   +    VS G  H     VA DS+  
Sbjct: 288 GRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHA----VALDSN-- 341

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                   G ++TWG G  G LGHGD+  +  P+ +  L +    QV      +  L  +
Sbjct: 342 --------GLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDT 393

Query: 488 GHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           G VY  G   +G LG P   V+D ++  R    +    V +++ G YH   +T   K++ 
Sbjct: 394 GIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKGKIFG 453

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           +G     QLGH        PT + F+ D   + +V
Sbjct: 454 FGDNERAQLGHESLRGCLEPTEI-FIHDLDDESIV 487



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 15/173 (8%)

Query: 175 ETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL 234
           +TFR+    VVS S+        DS G V+ WG+G   G LG G+         + D  +
Sbjct: 316 QTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYC-GALGHGD---------EIDKTI 365

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSHPQLIE 291
           P+ + S        +    R   ++   G ++ +G    G LG    G    V  P+ ++
Sbjct: 366 PQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLD 425

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            L    V  ++ G YHT  VT  G ++ +GD       LGH S   C  P ++
Sbjct: 426 SLRVHRVSQISTGLYHTVVVTEKGKIFGFGDN--ERAQLGHESLRGCLEPTEI 476


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR     + PQ++E L+GV +  ++ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG G   S   P  +   LD   + +++CG  H+A
Sbjct: 199 EAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDSPSLIEA-LDNQKVEFLACGGSHSA 255

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV----- 310

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 311 --------SDFGKVFSFGSGKDGQLGNGGTLDQLIP 338



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 30/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +            +  + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY------------DYSMKHLRSESILQ 135

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G         ++  +L G+ L+
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRTFPSTTTPQIVEHLAGVPLA 193

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G   S   P  +E L   +   ++CG  H
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 254 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQI 299

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 300 ACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 18/210 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG +F   T    P+ VE    + +  I+
Sbjct: 146 DYHSLALSKGGELFAWGQNL-HGQLG-----VGRTFPSTTT---PQIVEHLAGVPLAQIS 196

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG+   G+LG G       P LIE L    VE +ACG  H+  
Sbjct: 197 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSAL 256

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G L+T+G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  
Sbjct: 257 LTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDF 313

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET 399
           G +F+FG G  G LG+G  +   IP  V+ 
Sbjct: 314 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  +
Sbjct: 202 SMALSMS--------------GNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFL 247

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+  + V ++ACG +H 
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHT 306

Query: 534 AALTST-SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 307 LAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           R    L+  +  +++CG +H+ A+              +  G+LF WG    G+LG G  
Sbjct: 129 RSESILQEKKIIQITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG-- 172

Query: 455 EPRLFPECVAPLIDENIC-----QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
             R FP    P I E++      Q++ G   S+AL+ SG++Y+ G   +GQLG+   +  
Sbjct: 173 --RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESK 230

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
               +   +    VE +ACG  H A LT    ++T+G G +GQLGH    N   P LV  
Sbjct: 231 DSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE 290

Query: 570 LKDKQVKRVVCG 581
           L   +V ++ CG
Sbjct: 291 LVGNRVTQIACG 302



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRT---FPSTTTPQIVEHLAGV 190

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++SP+L++ L +++V+ + CG
Sbjct: 191 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250

Query: 582 LNFTAII 588
            + +A++
Sbjct: 251 GSHSALL 257


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG GR     + PQ++E L+GV +  ++ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           E H+ A++ SG++Y+WG   +  G LG G   S   P  +   LD   + +++CG  H+A
Sbjct: 199 EAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDSPSLIEA-LDNQKVEFLACGGSHSA 255

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V     
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV----- 310

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G  G+LG+G    +L P
Sbjct: 311 --------SDFGKVFSFGSGKDGQLGNGGTLDQLIP 338



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 30/282 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +            +  + H +   IL 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY------------DYSMKHLRSESILQ 135

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG G         ++  +L G+ L+
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRTFPSTTTPQIVEHLAGVPLA 193

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G   S   P  +E L   +   ++CG  H
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           +A +              T  G LFT+G G  G+LGH   +  L P  VA L+   + Q+
Sbjct: 254 SALL--------------TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQI 299

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLGV-PVADGLVPTRV 514
           ACG   ++A  +  G V++ GS   GQLG     D L+P  V
Sbjct: 300 ACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 13/200 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG+ + +G LG     VG +F   T    P+ VE    + +  I+ G  H++ ++
Sbjct: 156 GELFAWGQNL-HGQLG-----VGRTFPSTTT---PQIVEHLAGVPLAQISAGEAHSMALS 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+SWG+   G+LG G       P LIE L    VE +ACG  H+  +T+ G L+T+
Sbjct: 207 MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 266

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  G +F+FG G 
Sbjct: 267 GAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 323

Query: 380 FGALGHGDHISTSIPREVET 399
            G LG+G  +   IP  V+ 
Sbjct: 324 DGQLGNGGTLDQLIPLPVKV 343



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  + G+LG G  E +  P  +  L ++ +  +
Sbjct: 202 SMALSMS--------------GNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFL 247

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   S  LT  G ++T G+  +GQLG     + L P  V  E+  + V ++ACG +H 
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHT 306

Query: 534 AALTST-SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G +GQLG+G   ++  P  V     +++K
Sbjct: 307 LAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
           R    L+  +  +++CG +H+ A+              +  G+LF WG    G+LG G  
Sbjct: 129 RSESILQEKKIIQITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG-- 172

Query: 455 EPRLFPECVAPLIDENIC-----QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
             R FP    P I E++      Q++ G   S+AL+ SG++Y+ G   +GQLG+   +  
Sbjct: 173 --RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESK 230

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
               +   +    VE +ACG  H A LT    ++T+G G +GQLGH    N   P LV  
Sbjct: 231 DSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE 290

Query: 570 LKDKQVKRVVCG 581
           L   +V ++ CG
Sbjct: 291 LVGNRVTQIACG 302



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 7/127 (5%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
           L ++ I Q+ CG   S+AL+  G ++  G   +GQLGV       P+    +I E     
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRT---FPSTTTPQIVEHLAGV 190

Query: 523 -VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            + +++ G  H  AL+ +  +Y+WGK   GQLG G  ++++SP+L++ L +++V+ + CG
Sbjct: 191 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250

Query: 582 LNFTAII 588
            + +A++
Sbjct: 251 GSHSALL 257


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 181/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RHA+L+     + S GE S G+LG         P+ ++ L  
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLS 354
           +  +LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + PRK++  L+GI + 
Sbjct: 75  LKFDLVSCGKEHSLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKIT-TLNGIKII 131

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVW 413
            +SCG +H+  ++    +F++G  S G LG G    S   P+ V +L G+   +V+ G  
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDEN 470
           H+ A+ +              CG  F WG    G+L    +  ++    P  +  L +  
Sbjct: 192 HSFALSL--------------CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG 237

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEV 526
           +  ++CG + +  L+  G V+T G  + GQLG  P  +   P    R+DG      V ++
Sbjct: 238 VIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQI 292

Query: 527 ACGAYH-VAALTSTSKVYTWGKG--ANGQLGHGD--KDNRNSPTLV--DFLKDKQVKRVV 579
            CG  H +A + +T +V ++G+G  A  +  H +  K+N +   L+  D L D QVK + 
Sbjct: 293 DCGGDHTIAYVHTTGQVVSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-KYANFVTTHQDTSS 368



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 138/266 (51%), Gaps = 22/266 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ V++   L    ++CG  H++ V  +G +F+WG  S G+LG G   +++  P+ I  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQPSPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA  V++ D            GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTA--VLSQD------------GKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACGHDLSVALT-TSGHVYTMG 494
            + Q+ CG D ++A   T+G V + G
Sbjct: 288 LVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 20/268 (7%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR-VGYSFSRQTD 231
           A +T +  L S     S    H+     G VF WG G + G LG GE + + ++      
Sbjct: 71  ALKTLKFDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGVGELKEINFT------ 118

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLI 290
              P+ + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E      PQ +
Sbjct: 119 ---PRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRV 175

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLD 349
             L G+ +  VA G  H+ A++  G  + WG  +     L G   +V    P  + G L 
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALK 234

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            + + YISCG  HTAV++  G +FTFGD S G LG+        P+ VE + GL  +++ 
Sbjct: 235 NLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-VSQID 293

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           CG  HT A V  T    S   G ++  K
Sbjct: 294 CGGDHTIAYVHTTGQVVSFGRGPSATSK 321



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 28/220 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A      G        + Q  +  P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSAGQLALSGR-------NVQVQSNKPLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++++ G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG  HT A V  +G + ++G G   +    H        P  +  N D      I 
Sbjct: 290 SQIDCGGDHTIAYVHTTGQVVSFGRGPSATSKPTH--------PEALKENFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           C +    +V     H+F     +F    H D  STS PR+
Sbjct: 336 CLISADDLVDVQVKHIFAGKYANF-VTTHQDTSSTSAPRK 374


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 181/377 (48%), Gaps = 39/377 (10%)

Query: 236 KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG 295
           +  E +   ++   A G RHA+L+     + S GE S G+LG         P+ ++ L  
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLS 354
           +  +LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + PRK++  L+GI + 
Sbjct: 75  LKFDLVSCGKEHSLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKIT-TLNGIKII 131

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVW 413
            +SCG +H+  ++    +F++G  S G LG G    S   P+ V +L G+   +V+ G  
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDEN 470
           H+ A+ +              CG  F WG    G+L    +  ++    P  +  L +  
Sbjct: 192 HSFALSL--------------CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG 237

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEV 526
           +  ++CG + +  L+  G V+T G  + GQLG  P  +   P    R+DG      V ++
Sbjct: 238 VIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQI 292

Query: 527 ACGAYH-VAALTSTSKVYTWGKG--ANGQLGHGD--KDNRNSPTLV--DFLKDKQVKRVV 579
            CG  H +A + +T +V ++G+G  A  +  H +  K+N +   L+  D L D QVK + 
Sbjct: 293 DCGGDHTIAYVHTTGQVVSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIF 352

Query: 580 CGLNFTAIICLHKWVSS 596
            G  +   +  H+  SS
Sbjct: 353 AG-KYANFVTTHQDTSS 368



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 138/266 (51%), Gaps = 22/266 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ V++   L    ++CG  H++ V  +G +F+WG  S G+LG G   +++  P+ I  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQPSPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA  V++ D            GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTA--VLSQD------------GKVFTFGDNSSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACGHDLSVALT-TSGHVYTMG 494
            + Q+ CG D ++A   T+G V + G
Sbjct: 288 LVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 20/268 (7%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHR-VGYSFSRQTD 231
           A +T +  L S     S    H+     G VF WG G + G LG GE + + ++      
Sbjct: 71  ALKTLKFDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGVGELKEINFT------ 118

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLI 290
              P+ + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E      PQ +
Sbjct: 119 ---PRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRV 175

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLD 349
             L G+ +  VA G  H+ A++  G  + WG  +     L G   +V    P  + G L 
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALK 234

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            + + YISCG  HTAV++  G +FTFGD S G LG+        P+ VE + GL  +++ 
Sbjct: 235 NLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-VSQID 293

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           CG  HT A V  T    S   G ++  K
Sbjct: 294 CGGDHTIAYVHTTGQVVSFGRGPSATSK 321



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 28/220 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A      G        + Q  +  P ++
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSAGQLALSGR-------NVQVQSNKPLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++++ G++F++G+ S G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG  HT A V  +G + ++G G   +    H        P  +  N D      I 
Sbjct: 290 SQIDCGGDHTIAYVHTTGQVVSFGRGPSATSKPTH--------PEALKENFD------IR 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           C +    +V     H+F     +F    H D  STS PR+
Sbjct: 336 CLISADDLVDVQVKHIFAGKYANF-VTTHQDTSSTSAPRK 374


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 71/429 (16%)

Query: 203 VFIWGEGI-ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHN----IACGARHAV 257
            +IW  G  ++G LG          S Q D  LPK + S   L + +    I+ G+ H+ 
Sbjct: 166 AYIWSFGKNSDGELG---------ISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSA 215

Query: 258 LVTKQGEIFSWGEESGGRLG----HGREADVSHPQLIEILSGVNV----ELVACGEYHTC 309
           +VTK GE++  G +  G+LG    +G    VS    + +  G+ V    + VACG+YHT 
Sbjct: 216 IVTKAGELYVSGSQLHGKLGIQSVNGMH--VSKFTQVTMFDGIKVNQKVKQVACGDYHTL 273

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            + + G ++ WG GT +  +    ++     PR VSG L G  + +I CG +H+  +   
Sbjct: 274 CLMQDGQVFAWG-GTLHKKVGEKNAQAQNNEPRIVSG-LQGKQIVHIDCGDFHSVALDIQ 331

Query: 370 GHLFTFGDG----SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           G ++++G G    + G  GHG++     P +V+ +   +  ++S G +HT A+    +  
Sbjct: 332 GRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDN-- 389

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID----------EN----- 470
                      +L+ WG G  G  G G+ +    P+ V    D          +N     
Sbjct: 390 -----------ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFS 438

Query: 471 -----ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
                I Q++ G   ++ LT+ G VY+ G  ++GQLG+         ++  ++    ++ 
Sbjct: 439 SQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKA 498

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +A G  H   L+    ++  G G +GQLG  DK+ R   T V  L  K    +  G N  
Sbjct: 499 IAAGWNHSLILSDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGN-- 556

Query: 586 AIICLHKWV 594
                H WV
Sbjct: 557 -----HSWV 560



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 178/394 (45%), Gaps = 61/394 (15%)

Query: 235 PKAVESTMAL---DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           P+ +E        ++ NI+  A+   + TK+  I+S+G+ S G LG   + D   P+ I 
Sbjct: 137 PQQIEQQKPYSESNLENISEIAKE--IKTKKAYIWSFGKNSDGELGISSQKDQFLPKPIS 194

Query: 292 ILS---GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG----HGSKVSCWIPRKV 344
           I +       + ++ G +H+  VT++G+LY  G   +  G LG    +G  VS +    +
Sbjct: 195 IQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLH--GKLGIQSVNGMHVSKFTQVTM 252

Query: 345 SGNLDGIHLS----YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVET 399
               DGI ++     ++CG +HT  +   G +F +G      +G  +     + PR V  
Sbjct: 253 ---FDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSG 309

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG----DKGRLGHGDKE 455
           L+G +   + CG +H+ A+ +               G++++WG G    +KG+ GHG+ E
Sbjct: 310 LQGKQIVHIDCGDFHSVALDIQ--------------GRVYSWGGGGASYNKGQCGHGNNE 355

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVAL-TTSGHVYTMGSAAYGQLG------------ 502
               P  V  +    I Q++ G   ++AL      +Y  GS  YG+ G            
Sbjct: 356 DIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECGLGEFQASSKPKI 415

Query: 503 VPVADGLVPTRVDGEIAESF--------VEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           V +    V  +   ++   F        + +++ G +H   LTS  +VY++G G++GQLG
Sbjct: 416 VKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLG 475

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                N  SP LV  L  K +K +  G N + I+
Sbjct: 476 LRSTKNFCSPQLVKDLLSKNIKAIAAGWNHSLIL 509



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 41/254 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPR--EVETLRGLRTTR-VSCGVWHTAAVVVA 421
           + T   ++++FG  S G LG        +P+   ++ L+   T + +S G  H+A V   
Sbjct: 161 IKTKKAYIWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIV--- 217

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLG-------HGDK--EPRLFPECVAPLIDENIC 472
                      T  G+L+  G    G+LG       H  K  +  +F       +++ + 
Sbjct: 218 -----------TKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFD---GIKVNQKVK 263

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGA 530
           QVACG   ++ L   G V+  G   + ++G   A      P  V G   +  V  + CG 
Sbjct: 264 QVACGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIV-HIDCGD 322

Query: 531 YHVAALTSTSKVYTWGKGA----NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +H  AL    +VY+WG G      GQ GHG+ ++   P  V  +  +++ ++  G   T 
Sbjct: 323 FHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTL 382

Query: 587 IIC-----LHKWVS 595
            +C     L+ W S
Sbjct: 383 ALCEEDNELYAWGS 396


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 170/371 (45%), Gaps = 41/371 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG  +  G LG G H       R T   +P     T       IA G RH   V+
Sbjct: 76  GTVWAWGLNVW-GQLGDGTHT-----ERHTPVQVPGLTGVTA------IAAGRRHTFAVS 123

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +++WG+   G+LG G  AD   P  +  L+GV    +A G  HT AV + G ++ W
Sbjct: 124 QDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTA--IAAGRRHTFAVRQDGTVWAW 181

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           GD  +  G LG G++ +   P +V G L G+  + I+ G +HT  V   G ++ +G+ + 
Sbjct: 182 GDNAW--GQLGDGTRTNRLTPVQVPG-LTGV--TAIAAGDYHTLAVRQDGTVWAWGNNAL 236

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G +     P +V  L G+  T +S G  HT AV                 G ++ 
Sbjct: 237 GQLGDGTYTERLTPVQVPGLTGV--TAISAGESHTVAV--------------RQDGTVWA 280

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WGD   G+LG G +  RL P  V  L    +  +A G   + A+   G V+  G   +GQ
Sbjct: 281 WGDNVWGQLGDGTRTDRLTPVQVPGL--SGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQ 338

Query: 501 LGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG    +D L P +V      + V  +A G YH  A+     V+ WG    GQLG G   
Sbjct: 339 LGDGTRSDRLTPVQVP---DLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYT 395

Query: 560 NRNSPTLVDFL 570
           +R +P  V  L
Sbjct: 396 DRLTPVQVPGL 406



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 180/416 (43%), Gaps = 57/416 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+ +  G LG G +         TD L P  V       V  IA G  H V + 
Sbjct: 376 GTVWAWGDNVW-GQLGDGTY---------TDRLTPVQVPGLTG--VTAIAAGESHTVAMR 423

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +++WG+   G+LG G   D   P  +  L+  +V  +A G+YHT AV + G +  W
Sbjct: 424 QDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLT--SVTAIAAGDYHTLAVRQDGTVCAW 481

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL-SYISCGLWHTAVVTSAGHLFTFGDGS 379
           G   Y  G LG G+      P  V G L G+ + + ++ G  HT  V   G ++ +G  +
Sbjct: 482 GFNAY--GQLGDGTSSRSPSPVMVPG-LTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNA 538

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG G  I   IP ++  L G+  T ++ G  HT A              +   G ++
Sbjct: 539 SGQLGDGATIDRRIPVQIPGLAGV--TAIAAGSAHTLA--------------AGQDGAVW 582

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           +WG    G+LG G    RL P  V  L    +  +A G   SVAL   G V   G  ++G
Sbjct: 583 SWGANSYGQLGDGTTTHRLSPVQVPGL--TGVSAMAAGDAHSVALLQDGTVSAWGRNSWG 640

Query: 500 QLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           QLG    DG     L P +V G      V  VA G+ H  AL     V+ WG    GQLG
Sbjct: 641 QLG----DGTTAARLTPVQVHGLTG---VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLG 693

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
            G    R +P  V  L D  V  +  G   T  +         D +V +  +N +G
Sbjct: 694 DGTTTRRLAPVQVQGLTD--VTAIAAGYFHTVAV-------RQDGTVWAWGYNLWG 740



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 157/343 (45%), Gaps = 31/343 (9%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           +TD L P  V       V  +A G  H   V + G +++WG    G+LG G   +   P 
Sbjct: 44  RTDRLTPVQVPGLTG--VTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV 101

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            +  L+GV    +A G  HT AV++ G ++ WGD  +  G LG G++     P ++   L
Sbjct: 102 QVPGLTGVTA--IAAGRRHTFAVSQDGTVWAWGDNDW--GQLGDGTRADRHTPVQLP-EL 156

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
            G+  + I+ G  HT  V   G ++ +GD ++G LG G   +   P +V  L G+  T +
Sbjct: 157 TGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGV--TAI 212

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           + G +HT AV                 G ++ WG+   G+LG G    RL P  V  L  
Sbjct: 213 AAGDYHTLAV--------------RQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGL-- 256

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVA 527
             +  ++ G   +VA+   G V+  G   +GQLG     D L P +V G    S V  +A
Sbjct: 257 TGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPG---LSGVTAIA 313

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            G  H  A+     V+ WG    GQLG G + +R +P  V  L
Sbjct: 314 EGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDL 356



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 166/376 (44%), Gaps = 41/376 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+  A G LG G          +T+ L P  V       V  IA G  H + V 
Sbjct: 176 GTVWAWGDN-AWGQLGDGT---------RTNRLTPVQVPGLTG--VTAIAAGDYHTLAVR 223

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +++WG  + G+LG G   +   P  +  L+GV    ++ GE HT AV + G ++ W
Sbjct: 224 QDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTGVTA--ISAGESHTVAVRQDGTVWAW 281

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           GD  +  G LG G++     P +V G L G+  + I+ G  HT  V   G ++ +G   +
Sbjct: 282 GDNVW--GQLGDGTRTDRLTPVQVPG-LSGV--TAIAEGRRHTFAVRQDGTVWAWGLNFW 336

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G       P +V  L  +  T ++ G +HT AV                 G ++ 
Sbjct: 337 GQLGDGTRSDRLTPVQVPDLTSV--TAIAAGDYHTLAV--------------RQDGTVWA 380

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WGD   G+LG G    RL P  V  L    +  +A G   +VA+   G V+  G   +GQ
Sbjct: 381 WGDNVWGQLGDGTYTDRLTPVQVPGL--TGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQ 438

Query: 501 LG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG     D L P +V      + V  +A G YH  A+     V  WG  A GQLG G   
Sbjct: 439 LGDGTYTDRLTPVQVP---DLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSS 495

Query: 560 NRNSPTLVDFLKDKQV 575
              SP +V  L    V
Sbjct: 496 RSPSPVMVPGLTGVTV 511



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 148/325 (45%), Gaps = 37/325 (11%)

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H V V + G  ++WG  + G+LG G   D   P  +  L+GV    VA G +HT A
Sbjct: 14  AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTA--VAAGRHHTFA 71

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V + G ++ WG   +  G LG G+      P +V G L G+  + I+ G  HT  V+  G
Sbjct: 72  VRQDGTVWAWGLNVW--GQLGDGTHTERHTPVQVPG-LTGV--TAIAAGRRHTFAVSQDG 126

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            ++ +GD  +G LG G       P ++  L G+  T ++ G  HT AV            
Sbjct: 127 TVWAWGDNDWGQLGDGTRADRHTPVQLPELTGV--TAIAAGRRHTFAV------------ 172

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
                G ++ WGD   G+LG G +  RL P  V  L    +  +A G   ++A+   G V
Sbjct: 173 --RQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGL--TGVTAIAAGDYHTLAVRQDGTV 228

Query: 491 YTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           +  G+ A GQLG    DG     L P +V G      V  ++ G  H  A+     V+ W
Sbjct: 229 WAWGNNALGQLG----DGTYTERLTPVQVPGLTG---VTAISAGESHTVAVRQDGTVWAW 281

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFL 570
           G    GQLG G + +R +P  V  L
Sbjct: 282 GDNVWGQLGDGTRTDRLTPVQVPGL 306



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 169/376 (44%), Gaps = 48/376 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+ +  G LG G +         TD L P  V    +  V  IA G  H + V 
Sbjct: 426 GTVWAWGDNVW-GQLGDGTY---------TDRLTPVQVPDLTS--VTAIAAGDYHTLAVR 473

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV-ELVACGEYHTCAVTRSGDLYT 319
           + G + +WG  + G+LG G  +    P ++  L+GV V   +A G+ HT AV + G ++ 
Sbjct: 474 QDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWA 533

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG     SG LG G+ +   IP ++ G L G+  + I+ G  HT      G ++++G  S
Sbjct: 534 WG--LNASGQLGDGATIDRRIPVQIPG-LAGV--TAIAAGSAHTLAAGQDGAVWSWGANS 588

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LG G       P +V  L G+  + ++ G  H+ A++                G + 
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLTGV--SAMAAGDAHSVALL--------------QDGTVS 632

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG G    RL P  V  L    +  VA G   +VAL   G V+  G    G
Sbjct: 633 AWGRNSWGQLGDGTTAARLTPVQVHGL--TGVTAVAAGSLHTVALRQDGTVWAWGYNDLG 690

Query: 500 QLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           QLG    DG     L P +V G    + V  +A G +H  A+     V+ WG    GQLG
Sbjct: 691 QLG----DGTTTRRLAPVQVQGL---TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLG 743

Query: 555 HGDKDNRNSPTLVDFL 570
            G    R++P  V  L
Sbjct: 744 DGSSTARSTPVQVQEL 759



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 151/324 (46%), Gaps = 31/324 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +A G  H V V + G +++WG  + G+LG G   D   P  I  L+GV    +A G  HT
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTA--IAAGSAHT 572

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A  + G +++WG  +Y  G LG G+      P +V G L G+  S ++ G  H+  +  
Sbjct: 573 LAAGQDGAVWSWGANSY--GQLGDGTTTHRLSPVQVPG-LTGV--SAMAAGDAHSVALLQ 627

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G +  +G  S+G LG G   +   P +V  L G+  T V+ G  HT A+          
Sbjct: 628 DGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGV--TAVAAGSLHTVAL---------- 675

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                  G ++ WG  D G+LG G    RL P  V  L D  +  +A G+  +VA+   G
Sbjct: 676 ----RQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAIAAGYFHTVAVRQDG 729

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTR-VDGEIAE-SFVEEVACGAYHVAALTSTSKVYTWG 546
            V+  G   +GQLG    DG    R    ++ E + V  +A G  H  A+     V+ WG
Sbjct: 730 TVWAWGYNLWGQLG----DGSSTARSTPVQVQELTGVSALAAGYAHTVAVKQDGTVWAWG 785

Query: 547 KGANGQLGHGDKDNRNSPTLVDFL 570
             +  QLG+G   +R +P  V+ L
Sbjct: 786 NNSGTQLGNGSSTDRYTPVWVEGL 809



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            V     GEYHT AV + G  + WG+  +  G LG G++     P +V G L G+  + +
Sbjct: 8   GVTATTAGEYHTVAVRQDGTAWAWGNNAW--GQLGDGTRTDRLTPVQVPG-LTGV--TAV 62

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           + G  HT  V   G ++ +G   +G LG G H     P +V  L G+  T ++ G  HT 
Sbjct: 63  AAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTGV--TAIAAGRRHTF 120

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           AV              +  G ++ WGD D G+LG G +  R  P  +  L    +  +A 
Sbjct: 121 AV--------------SQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPEL--TGVTAIAA 164

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAY 531
           G   + A+   G V+  G  A+GQLG    DG     L P +V G      V  +A G Y
Sbjct: 165 GRRHTFAVRQDGTVWAWGDNAWGQLG----DGTRTNRLTPVQVPGLTG---VTAIAAGDY 217

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           H  A+     V+ WG  A GQLG G    R +P  V  L
Sbjct: 218 HTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGL 256



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 11/157 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           DV  IA G  H V V + G +++WG    G+LG G     S P  ++ L+GV+   +A G
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSA--LAAG 768

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGL-LGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
             HT AV + G ++ WG+   NSG  LG+GS    + P  V G L G+  S ++ G +HT
Sbjct: 769 YAHTVAVKQDGTVWAWGN---NSGTQLGNGSSTDRYTPVWVEG-LTGV--SALTAGRFHT 822

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           A V+  G  + +G  +FG +  GD  +   PR V+ +
Sbjct: 823 AAVSPEGFGWAWGRNNFGQV--GDGTTADRPRPVDVV 857


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 48/377 (12%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ +S P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS--------KVSCWIPRKVSGNLDGIHLSYISCGL 360
              T +G +Y  G    N G LG G         ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T  G LF +GD S G +G  +  +  IP EV    G   + +SCG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV-- 243

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVAC 476
                       T+ G+L+T+G+ + G+LG  +   +L     +P     I + + QVAC
Sbjct: 244 ------------TTDGELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPDKVIQVAC 288

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           G   +V LT    VY  G   +GQLG+   + +   P  +D  I +  +  ++CG  H A
Sbjct: 289 GGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIID-RIKDQKISHISCGENHTA 346

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
            +T    +YT+G G +G+LG G ++  N+  PTL        V+ + CG     +    +
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATPR 406

Query: 593 WVSSVDHSVCSSCHNPF 609
            + ++D +     + P+
Sbjct: 407 -LGTIDETEFEEVYEPY 422



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   D      I   +
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +K +  IP +V+    G  +
Sbjct: 176 PSDIIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLKNKSNVCIPHEVT---VGKPI 230

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  + +  +  R  + + G+  +  +V+CG
Sbjct: 231 SWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACG 289

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+              ++ +G G  G+LG G     LF    P+ +  + 
Sbjct: 290 GGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIDRIK 331

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V+
Sbjct: 332 DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFT-VQ 390

Query: 525 EVACGAYHVAALTS 538
            +ACG  H+    +
Sbjct: 391 LIACGGCHMLVFAT 404



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   +  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLTEK-VVY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    +S+ISCG  HTA++T  G ++TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH--MLVFAT 404



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 27/226 (11%)

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++V   G +FTFG   F         + +IP +    +      +SCG  HTA V     
Sbjct: 44  SLVPDTGAVFTFGKTKF---------AENIPSKF-WFKNDVPICLSCGDEHTAIV----- 88

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P C+  L  E +   ACG + ++ 
Sbjct: 89  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLV 139

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES-FVEEVACGAYHVAALTSTSKV 542
            T +G VY  G    GQLG+   D        G    S  +++++ GA   AALT   K+
Sbjct: 140 STDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKL 199

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + WG  + GQ+G  +K N   P  V     K +  + CG   +A +
Sbjct: 200 FMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV 243


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 166/373 (44%), Gaps = 70/373 (18%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H+V +     + SWG    G+LGHG   D S P  +  L    +  V CG  HT
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++S  ++Y+WG G +  G LGHG+    + P  +   L G+ +  I+CG  H   VT
Sbjct: 76  VAYSQSRLEVYSWGWGDF--GRLGHGNSSDLFTPLPIKA-LHGVMIKQIACGDSHCLAVT 132

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG G+   + +P++++   G+R   V+ G  HTAAV         
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV--------- 183

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPE----CV-------------------- 463
                T  G L+ W DG   + G  D+  RLF +    CV                    
Sbjct: 184 -----TEDGDLYGW-DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSII 237

Query: 464 -----------------APLIDEN--------ICQVACGHDLSVALTTSGHVYTMGSAAY 498
                            +P    N          Q++ G   ++ LT+ G +Y  G   +
Sbjct: 238 YLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKF 297

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQ+GV    D   P +V     +  V +V+CG  H  A+T  + V+ WG+G NGQLG G+
Sbjct: 298 GQVGVGNNLDQCSPVQVRFPDDQKVV-QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE 356

Query: 558 KDNRNSPTLVDFL 570
             +RNSP +++ L
Sbjct: 357 SLDRNSPNIIEAL 369



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 140/300 (46%), Gaps = 43/300 (14%)

Query: 243 ALDVHNIA---CGARHAVLVTK-QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           ALD H I    CGA H V  ++ + E++SWG    GRLGHG  +D+  P  I+ L GV +
Sbjct: 59  ALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMI 118

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + +ACG+ H  AVT  G++ +WG     +G LG G+     +P+K+    +GI +  ++ 
Sbjct: 119 KQIACGDSHCLAVTMDGEVQSWG--RNQNGQLGLGNTEDSLVPQKIQA-FEGIRIKMVAA 175

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGD------------------------HIS---- 390
           G  HTA VT  G L+ + DG     G  D                        HIS    
Sbjct: 176 GAEHTAAVTEDGDLYGW-DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLW 234

Query: 391 TSIPREVETLRGLRTTRVS---CGV--WHTAAVVVATDSSSS--SPSGSTSCGKLFTWGD 443
           + I   +E +   RT R+    C +  W  +A    +  S         TS GKL+ WG 
Sbjct: 235 SIIYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGW 294

Query: 444 GDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
              G++G G+   +  P  V    D+ + QV+CG   ++A+T   +V+  G    GQLG+
Sbjct: 295 NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 354



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 142/350 (40%), Gaps = 76/350 (21%)

Query: 166 NSNDRSSAAETFRI---SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           ++ DRSS  +   +    + SV   + H  A+    S  +V+ WG G           R+
Sbjct: 47  DAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQ--SRLEVYSWGWGDFG--------RL 96

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           G+  S  +D   P  +++   + +  IACG  H + VT  GE+ SWG    G+LG G   
Sbjct: 97  GHGNS--SDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTE 154

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS----- 337
           D   PQ I+   G+ +++VA G  HT AVT  GDLY W    +  G+     ++      
Sbjct: 155 DSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYL 214

Query: 338 CWIPRKVSGNLDGIHLSY-----------------------------------------I 356
           C + R V G +   H+S+                                         I
Sbjct: 215 CCV-RDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQI 273

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           S G  HT  +TS G L+ +G   FG +G G+++    P +V      +  +VSCG  HT 
Sbjct: 274 SGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 333

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           AV              T    +F WG G  G+LG G+   R  P  +  L
Sbjct: 334 AV--------------TERNNVFAWGRGTNGQLGIGESLDRNSPNIIEAL 369



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 5/160 (3%)

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG- 488
           SG   C    +WG G+ G+LGHGD E R  P  ++ L +  I  V CG D +VA + S  
Sbjct: 28  SGEVVC----SWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRL 83

Query: 489 HVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
            VY+ G   +G+LG   +  L        +    ++++ACG  H  A+T   +V +WG+ 
Sbjct: 84  EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRN 143

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            NGQLG G+ ++   P  +   +  ++K V  G   TA +
Sbjct: 144 QNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 183



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           ++ GA H  AL S   V +WG+G +GQLGHGD ++R+SPT +  L + Q+  V CG + T
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           V  ++CG RH + VT++  +F+WG  + G+LG G   D + P +IE LS
Sbjct: 322 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEALS 370


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 171/373 (45%), Gaps = 45/373 (12%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V  WG G  +G LG              +  L   V++    +V ++  G+R+++ +   
Sbjct: 7   VIAWGSG-EDGQLG---------LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD 56

Query: 263 GEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           G++F+WG    G LGH  E    S P L++ L+ V +   A G +H  AV   G  Y WG
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWG 116

Query: 322 DGTY-------NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
              Y       +    G   +    IP++ +  L    +  ++ G  H+ V+T  G+++T
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT---VRQVAAGGTHSVVLTREGYVWT 173

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G         GD    S+P  V+ L  +R   ++ G +H  A+                
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLAL--------------KE 213

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G L+ WG+ + G+LG GD +PR +P  V  L D  +  +A G   S ALT  G VY  G
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273

Query: 495 SAAYGQLGVPVAD---GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
              +G+LG    D    ++P +V+    E  + +V+CG  H  ALT   +++++G+G +G
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVNLLPGEDII-QVSCGGTHSVALTRDGRIFSFGRGDHG 332

Query: 552 QLGHGDKDNRNSP 564
           +LG+G K     P
Sbjct: 333 RLGYGRKVTTGQP 345



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 27/324 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + +WG    G+LG G + +     +++ L   NV  V  G  ++ A+   G L+TWG   
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--- 63

Query: 325 YNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +N  G LGH  +        +  +L  + +   + G WH   V   G  + +G   +G  
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQC 123

Query: 384 GHGDHISTSIPREVETLRGLRTTRV---SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G         P + ET R +R   V    C    T   V A  + S      T  G ++T
Sbjct: 124 G-------EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVV---LTREGYVWT 173

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG         GD +    P  V  L  EN+  +A G   ++AL   G ++  G+  YGQ
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG         P  V G + +  + ++A G +H  ALT+  +VY WG+G +G+LG GD D
Sbjct: 228 LGTGDTQPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 560 --NRNSPTLVDFLKDKQVKRVVCG 581
             ++  P  V+ L  + + +V CG
Sbjct: 287 KSSKMLPQKVNLLPGEDIIQVSCG 310



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 1/153 (0%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + + + G +++WG    G+LG G     S+P  ++ L  + +  +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+ A+T  G++Y WG G +     G   K S  +P+KV+  L G  +  +SCG  H+ 
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLPGEDIIQVSCGGTHSV 315

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
            +T  G +F+FG G  G LG+G  ++T  P E+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 47/231 (20%)

Query: 108 PFDFGDIQGTQVP-----LDNVSNNGLGKAFADIISYTE----AANTNSRADSVSFSPSP 158
           P+  GDI+   VP     L+NV    +G AF ++    +    A   N      +    P
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVG-AFHNLALKEDGTLWAWGNNEYGQLGTGDTQP 235

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG 218
            +   P    D         ++L  + +   H +A     + G+V+ WG G         
Sbjct: 236 RSYPIPVQGLDD--------LTLVDIAAGGWHSTA---LTNEGEVYGWGRG--------- 275

Query: 219 EH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           EH R+G+  + ++  +LP+ V      D+  ++CG  H+V +T+ G IFS+G    GRLG
Sbjct: 276 EHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 278 HGREADVSHPQLIEI--------LSGVNVE--------LVACGEYHTCAVT 312
           +GR+     P  + I         +  + E         VACG  HT A+ 
Sbjct: 336 YGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIV 386


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 17/216 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACG 304
           +  I CG  H++ ++K GE+F+WG+   G+LG G + A ++ PQ++E LSG+ +  ++ G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A++ SG++Y+WG   +  G LG G       P  +   LD   + +++CG  HTA
Sbjct: 318 KAHSMALSMSGNIYSWGRNDF--GQLGLGHTDGKDFPSLIEA-LDNQKVEFLACGGSHTA 374

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           ++T  G +FTFG G  G LGH    +   PR V  L G R T+++CG  HT A V     
Sbjct: 375 LLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYV----- 429

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                   +  GK+F++G G +G+LG+G    +L P
Sbjct: 430 --------SDLGKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++      +H++  GA + ++++  G+ F +               + H +   IL 
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYN------------YSIEHARFQCILQ 254

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              +  + CG+YH+ A+++ G+L+ WG   +  G LG GS+ +     ++  NL GI L 
Sbjct: 255 EKXIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGIGSQFASIAIPQIVENLSGIPLV 312

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ +G+++++G   FG LG G       P  +E L   +   ++CG  H
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSH 372

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+G G  G+LGH   +  L P  V  L    + Q+
Sbjct: 373 TALL--------------TKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQI 418

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLG 502
           ACG   ++A  +  G V++ GS   GQLG
Sbjct: 419 ACGRQHTLAYVSDLGKVFSFGSGKEGQLG 447



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 16/211 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    S +IP+ VE L G+   ++S G  H
Sbjct: 261 ITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAH 320

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++              G +++WG  D G+LG G  + + FP  +  L ++ +  +
Sbjct: 321 SMALSMS--------------GNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFL 366

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ACG   +  LT  G V+T G+  +GQLG       +  R+  E+A + V ++ACG  H  
Sbjct: 367 ACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTL 426

Query: 535 ALTS-TSKVYTWGKGANGQLGHGDKDNRNSP 564
           A  S   KV+++G G  GQLG+G   N+  P
Sbjct: 427 AYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG G        S+     +P+ VE+   + +  I+
Sbjct: 265 DYHSLALSKGGELFAWGQNL-HGQLGIG--------SQFASIAIPQIVENLSGIPLVQIS 315

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG    G+LG G       P LIE L    VE +ACG  HT  
Sbjct: 316 AGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTAL 375

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G ++T+G G +  G LGH S  +   PR V+  L G  ++ I+CG  HT A V+  
Sbjct: 376 LTKDGLVFTFGAGKH--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRQHTLAYVSDL 432

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 433 GKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 25/185 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G +    F     P 
Sbjct: 260 QITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGIGSQ----FASIAIPQ 301

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
           I EN+      Q++ G   S+AL+ SG++Y+ G   +GQLG+   DG   P+ ++  +  
Sbjct: 302 IVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEA-LDN 360

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT    V+T+G G +GQLGH    N   P LV  L   +V ++ C
Sbjct: 361 QKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIAC 420

Query: 581 GLNFT 585
           G   T
Sbjct: 421 GRQHT 425



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 5/130 (3%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEI 518
           +C+  L ++ I Q+ CG   S+AL+  G ++  G   +GQLG+    A   +P  V+   
Sbjct: 250 QCI--LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLS 307

Query: 519 AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
               V+ ++ G  H  AL+ +  +Y+WG+   GQLG G  D ++ P+L++ L +++V+ +
Sbjct: 308 GIPLVQ-ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFL 366

Query: 579 VCGLNFTAII 588
            CG + TA++
Sbjct: 367 ACGGSHTALL 376


>gi|70949528|ref|XP_744165.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56524006|emb|CAH74665.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 426

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 180/373 (48%), Gaps = 44/373 (11%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH------GREADVS-H 286
            P+ + +     ++ ++ G  HA  +   G+I+++G    G+LG       G+E+ +S  
Sbjct: 61  FPEKIRNFENKQINKLSAGCNHAAFIV-DGKIYTYGLNDKGQLGRTLSNEGGKESKISLT 119

Query: 287 PQLIEILS-GVNVELVACGEYHTCAVTRSGDLYTWG-DGTYNSGL--LGHGSKVSCWIPR 342
           P+ IE+    +  + V CG  HT AV  + DLY+WG  G +  G   LG G+K +   P+
Sbjct: 120 PEEIELDDKSIKFKDVCCGYKHTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPK 179

Query: 343 KVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL- 400
           K+   N D      I CG  H+  +T +G ++  G G FG LG G+H       E++   
Sbjct: 180 KIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFV 239

Query: 401 -RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH----GD-K 454
              +    ++CG   +AA+              ++ G+++ WG  D G+LG     GD  
Sbjct: 240 NNNIIIKDIACGNSFSAAL--------------SNNGEVYVWGRNDYGQLGIENSIGDLY 285

Query: 455 EPRLFPECVAPLIDENIC--QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
              ++P  V     ENI    +ACG +  +A + S  +Y  GS A+ +   P A  L P 
Sbjct: 286 SHEVYPNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWGSRAWLE---PKAITLNPK 342

Query: 513 RVDGEIAESFVEEVACG--AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD-- 568
             +  I ++ +++V  G  +Y+ + L S +K+Y+WGK  +  L  GDK N N PTLVD  
Sbjct: 343 YQNSLIKKN-IDKVQAGGNSYYYSMLLSDNKLYSWGKYNSSCLALGDKKNHNEPTLVDPE 401

Query: 569 FLKDKQVKRVVCG 581
              ++ +  + CG
Sbjct: 402 LFDNEIICDISCG 414



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 40/233 (17%)

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           GDG F ++  G+      P ++      +  ++S G  H A +V                
Sbjct: 46  GDGLFSSIQAGE--KYPFPEKIRNFENKQINKLSAGCNHAAFIVD--------------- 88

Query: 436 GKLFTWGDGDKGRLG-----HGDKEPR--LFPECVAPLIDENIC--QVACGHDLSVALTT 486
           GK++T+G  DKG+LG      G KE +  L PE +  L D++I    V CG+  ++A+  
Sbjct: 89  GKIYTYGLNDKGQLGRTLSNEGGKESKISLTPEEI-ELDDKSIKFKDVCCGYKHTLAVDE 147

Query: 487 SGHVYTMG------SAAYGQLGVPVADGLV-PTRVDGEIAES--FVEEVACGAYHVAALT 537
           +  +Y+ G        A G LG    + L+ P +++    ++  F+  + CG  H  ALT
Sbjct: 148 NNDLYSWGWGGNFFKGASG-LGQGNKNNLMKPKKIEAFNNDNSEFIN-ICCGEQHSLALT 205

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ--VKRVVCGLNFTAII 588
            + KVY  GKG  G+LG G+  ++     +D+  +    +K + CG +F+A +
Sbjct: 206 KSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNIIIKDIACGNSFSAAL 258


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 35/338 (10%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGV 296
           VE+     V ++  G+R+++ +   G +F+WG    G LGH  E    + P  ++ L+ V
Sbjct: 32  VEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANV 91

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNS-------GLLGHGSKVSCWIPRKVSGNLD 349
            +   A G +H  AV   G  Y WG   Y           +G   +    IP++ +  L 
Sbjct: 92  KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT 151

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
              +  ++ G  H+ V+T  GH++T+G         GD    S+P  V+ L  +R   ++
Sbjct: 152 ---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL--IA 202

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G +H  A+                 G+L  WG+ + G+LG GD +P   P  V  L D 
Sbjct: 203 VGAFHNLAL--------------EEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL 248

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD---GLVPTRVDGEIAESFVEEV 526
            +  +A G   S ALT  G VY  G   +G+LG+   D    +VP +V+  +AE  + +V
Sbjct: 249 TLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQV 307

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
           +CG  H  ALT   +++++G+G +G+LG+G K     P
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 43/332 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           I +WG    G+LG G   +     ++E L   +V  V  G  ++ A+   G ++TWG   
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--- 63

Query: 325 YNS-GLLGHGSKVSCW-IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           +N  G LGH  +     IP +V   L  + ++  + G WH   V   G  + +G   +G 
Sbjct: 64  WNQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122

Query: 383 LGH---GDHISTSIPREVETLR----GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G     D +   + R++   +     L   +V+ G  H+  +              T  
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL--------------TRE 168

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G ++TWG         GD +    P  V  L  EN+  +A G   ++AL   G +   G+
Sbjct: 169 GHVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEEDGRLLAWGN 222

Query: 496 AAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             YGQLG     P +    P  V G + +  + ++A G +H  ALT   +VY WG+G +G
Sbjct: 223 NEYGQLGTGDTQPTSH---PVPVQG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278

Query: 552 QLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +LG GD D  ++  P  V+ L ++ + +V CG
Sbjct: 279 RLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCG 310



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 17/191 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + + + G + +WG    G+LG G     SHP  ++ L  + +  +A G
Sbjct: 197 NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+ A+T  G++Y WG G +    LG   K S  +P+KV+  L    +  +SCG  H+ 
Sbjct: 257 GWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSV 315

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREV---------------ETLRGLRTTR-V 408
            +T  G +F+FG G  G LG+G  ++T  P E+               E   G  + + +
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSI 375

Query: 409 SCGVWHTAAVV 419
           +CG  HT A+V
Sbjct: 376 ACGGRHTLAIV 386


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 152/317 (47%), Gaps = 24/317 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V  ++    HA  V + GE+F+ G+ S    GHG     +  P+L+E L GV  + VA G
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAG 224

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLWHT 363
              T  +T  G +YT G  T+  G LGHG  V    P+ V   L+G+  +  I+ G  + 
Sbjct: 225 LSFTVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYA 281

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVA 421
             VT  G + +FG GS   LGHG+  +   PR +++ R   +   R+S G  H    VVA
Sbjct: 282 MAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEH----VVA 337

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
            DSS          G ++TWG G  G LGHGD+  +  PE ++ L      QV      +
Sbjct: 338 LDSS----------GFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKT 387

Query: 482 VALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             L  +G VY  G   +G LG P    +D ++   +   +   ++ +++ G YH  A+ +
Sbjct: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXN 447

Query: 539 TSKVYTWGKGANGQLGH 555
             +++ +G     QLGH
Sbjct: 448 KGQIFGFGDNERAQLGH 464



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 133/284 (46%), Gaps = 18/284 (6%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ VE+   +    +A G    V +T +G +++ G  + G+LGHG   D   P+++E+L 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIH 352
           GV  V  +A G  +  AVT  G ++++G G+  +  LGHG + +   PR + S     IH
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGS--NFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  IS G  H   + S+G ++T+G G  GALGHGD I  + P  + +L+     +V C  
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQV-CAR 383

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTW-GDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                V+V T S              F W G G  G    G  +  + P  +  L    I
Sbjct: 384 KRKTFVLVDTGSVYG-----------FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYI 432

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRV 514
            Q++ G   +VA+   G ++  G     QLG     G  VPT +
Sbjct: 433 SQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 15/178 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ++FR     VV  S+        DS G V+ WG+G   G LG G+         +
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYC-GALGHGD---------E 360

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D   P+ + S  +     +    R   ++   G ++ +G    G LG    G    V  
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P +++ L G  +  ++ G YHT AV   G ++ +GD       LGH +   C +P ++
Sbjct: 421 PWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDN--ERAQLGHDTLRGCPVPTEI 476


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 206 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 259 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 315

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 78  PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 136

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 137 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTV---GKP 191

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 250

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 251 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 292

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 293 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 351

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 352 QLIACGGCHMLVFAT 366



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 265 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 366


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 34/370 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG     +    + + ++D 
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATPR-LGTIDE 412

Query: 600 SVCSSCHNPF 609
                 + P+
Sbjct: 413 PKFEDVYEPY 422



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTV---GKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV-VY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 404


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 206 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 259 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 315

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 78  PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 136

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 137 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTV---GKP 191

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 250

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 251 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 292

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 293 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 351

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 352 QLIACGGCHMLVFAT 366



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 265 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 366


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 156/326 (47%), Gaps = 43/326 (13%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +FSWG  +GG+LGH  E + S P+ +  L      ++A G                    
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGE----------------- 44

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             SG LG G++  C IP+++  N+    +  +SCG  H+AV T A  + T+G+G+ G LG
Sbjct: 45  --SGRLGLGNENCCNIPKRI--NIK-KKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLG 99

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD IS + P   E     +  ++SCG   TA + +A              GK+FT+G G
Sbjct: 100 TGDEISRTQPVLPEH----KVAQISCGSDWTAVLTLA--------------GKVFTFGVG 141

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
             G+LGHG+   +L P+ V  L  E +  ++CG D   AL   G V+T G    G+LG  
Sbjct: 142 SYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHG 201

Query: 505 VA-DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRN 562
              D   P  V G +       V CG YH+   T   ++Y WG    GQ G G   +N+ 
Sbjct: 202 SERDSKKPVLVKG-MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQL 260

Query: 563 SPTLVDFLKDKQVKRVVCGLNFTAII 588
           +P LV+ L+ K+V  V CG + T  +
Sbjct: 261 TPVLVEQLRGKRVLMVACGESHTMAL 286



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 133/278 (47%), Gaps = 26/278 (9%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           I + G    GRLG G E   + P+ I I     V  V+CG+ H+   T +  + TWG+GT
Sbjct: 37  IIAVGNGESGRLGLGNENCCNIPKRINIKK--KVVGVSCGDEHSAVFTEANTVLTWGNGT 94

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
              G LG G ++S   P      L    ++ ISCG   TAV+T AG +FTFG GS+G LG
Sbjct: 95  --GGRLGTGDEISRTQPV-----LPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLG 147

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG+  +  +P+ VE L   R   +SCG  H AA+ +  D              +FTWG G
Sbjct: 148 HGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGD--------------VFTWGCG 193

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ--LG 502
             GRLGHG +     P  V  +       V CG       T  G +Y  G   YGQ  LG
Sbjct: 194 GNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLG 253

Query: 503 VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           + V + L P  V+ ++    V  VACG  H  AL S +
Sbjct: 254 LHVENQLTPVLVE-QLRGKRVLMVACGESHTMALVSNN 290



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 121/244 (49%), Gaps = 19/244 (7%)

Query: 178 RISLSSVVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           RI++   V   S G  H   F     V  WG G       GG    G   SR T  +LP+
Sbjct: 61  RINIKKKVVGVSCGDEHSAVFTEANTVLTWGNGT------GGRLGTGDEISR-TQPVLPE 113

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGV 296
                    V  I+CG+    ++T  G++F++G  S G+LGHG +++   P+L+E L   
Sbjct: 114 H-------KVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTE 166

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
            V  ++CG  H  A+   GD++TWG G   +G LGHGS+     P  V G ++G+    +
Sbjct: 167 RVVSLSCGADHMAALNIEGDVFTWGCG--GNGRLGHGSERDSKKPVLVKG-MNGLVALTV 223

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHT 415
            CG +H  V T  G L+ +G   +G  G G H+   + P  VE LRG R   V+CG  HT
Sbjct: 224 ECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHT 283

Query: 416 AAVV 419
            A+V
Sbjct: 284 MALV 287



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF +G G + G LG G           ++ L+PK VE      V +++CGA H   + 
Sbjct: 133 GKVFTFGVG-SYGKLGHG---------NDSNQLVPKLVEELDTERVVSLSCGADHMAALN 182

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +G++F+WG    GRLGHG E D   P L++ ++G+    V CG YH    T  G+LY W
Sbjct: 183 IEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYHMGVTTLDGELYMW 242

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           G   Y  G  G G  V   +   +   L G  +  ++CG  HT  + S
Sbjct: 243 GWNVY--GQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMALVS 288



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 25/154 (16%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +F+WG G+ G+LGH D+E   FP  V+ L  +    +A                 +G+  
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIA-----------------VGNGE 44

Query: 498 YGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
            G+LG+   +   +P R++    +  V  V+CG  H A  T  + V TWG G  G+LG G
Sbjct: 45  SGRLGLGNENCCNIPKRIN---IKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTG 101

Query: 557 DKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           D+ +R  P L     + +V ++ CG ++TA++ L
Sbjct: 102 DEISRTQPVL----PEHKVAQISCGSDWTAVLTL 131


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 190/416 (45%), Gaps = 68/416 (16%)

Query: 205 IWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMALDVHN-----IACGARHAVL 258
           +WG    NG  G    R+GY      D++  PK + S+     HN     I+CG  H + 
Sbjct: 34  VWG----NGDYG----RLGYG---NLDSMWRPKLMNSS---SFHNSNLKSISCGGAHTLF 79

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV--ACGEYHTCAVTRSGD 316
           +T+ G +++ G    G+LG           L   +SG+  E+V  + G +H+CA+T  G+
Sbjct: 80  LTETGRVYATGLNDFGQLGVSNNTTYCMEPLE--VSGLKKEIVQISAGYHHSCAITVDGE 137

Query: 317 LYTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           LYTWG  +  +G LG G K      +P KV   L GI++  ++    H+  VT  G   +
Sbjct: 138 LYTWGKNS--NGQLGLGKKAENVVPVPTKVE-CLSGINIKMVALASEHSIAVTDGGQALS 194

Query: 375 FGDGSFGA---------LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +G G  G          LG     S   PR ++ L G++   ++ G+ H+A +       
Sbjct: 195 WGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACI------- 247

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G ++ +G+    +L  GD      P  +  L      +VACG   +  +T
Sbjct: 248 -------DENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQ--EVACGGYHTCVIT 298

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
           + G +YT GS   G LG    D L +P RV+G    S VE+V+CG  H AA+ S   V+T
Sbjct: 299 SGGELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAI-SEGNVFT 357

Query: 545 WGKGAN------------GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           WG G +            GQLGHGD  +  +PTLV F K  +   V CG N T  I
Sbjct: 358 WGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAI 413



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 17/211 (8%)

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
           F R +    P+ ++    + V NIA G  H+  + + G ++ +GE++  +L  G   + +
Sbjct: 214 FFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDANNAT 273

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P +I  L     + VACG YHTC +T  G+LYTWG  +  +G LG+GS     IP +V 
Sbjct: 274 TPSMIGKLP--YSQEVACGGYHTCVITSGGELYTWG--SNENGCLGNGSIDVLHIPERVE 329

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG------------SFGALGHGDHISTSI 393
           G      +  +SCG  HTA + S G++FT+G G            S G LGHGD      
Sbjct: 330 GPFLRSPVEKVSCGWKHTAAI-SEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVN 388

Query: 394 PREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           P  V   + ++   VSCG  HT A++ + D+
Sbjct: 389 PTLVAFEKKMKALEVSCGFNHTGAILESVDA 419



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 22/128 (17%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+++ WG    NG LG G   V +   R     L   VE         ++CG +H   ++
Sbjct: 301 GELYTWGSN-ENGCLGNGSIDVLHIPERVEGPFLRSPVE--------KVSCGWKHTAAIS 351

Query: 261 KQGEIFSWGE------------ESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            +G +F+WG              SGG+LGHG + D  +P L+     +    V+CG  HT
Sbjct: 352 -EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHT 410

Query: 309 CAVTRSGD 316
            A+  S D
Sbjct: 411 GAILESVD 418


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 176/374 (47%), Gaps = 49/374 (13%)

Query: 243 ALDVHN---IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           A D H+   IACG  H + +T+ G +++ G    G+LG   + + +   L        + 
Sbjct: 62  AFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKII 121

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYIS 357
            +A G YH+ A+T  G+LY WG  +  +G LG G K +    +P KV   L+GI +  ++
Sbjct: 122 HIAAGYYHSAAITADGELYMWGKNS--NGQLGLGKKAANAVSVPSKVE-CLNGISIKMVA 178

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI----------PREVETLRGLRTTR 407
            G  H+   T  G   ++G G  G LGHG H S+ +          PR +  L G++   
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHG-HESSLLGFFRTSSEYRPRLIRRLEGIKVKN 237

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+ G+ H+A +                 G +F +G+    + G  + +    P  ++ L 
Sbjct: 238 VAAGLLHSACI--------------DENGSVFIFGERAMDKFGFREAKNATAPSMISELP 283

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEV 526
                QVACG   +  +++SG ++T GS   G LG+   + +  P R++G  +++ V +V
Sbjct: 284 YSK--QVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQV 341

Query: 527 ACGAYHVAALTSTSKVYTWGKGAN------------GQLGHGDKDNRNSPTLVDFLKDKQ 574
           +CG  H AA+ S   V+TWG G +            GQLG G   +   P +V+F +  +
Sbjct: 342 SCGWKHTAAI-SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVR 400

Query: 575 VKRVVCGLNFTAII 588
             +V CG N T  I
Sbjct: 401 ALQVSCGFNHTGAI 414



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 152/345 (44%), Gaps = 55/345 (15%)

Query: 268 WGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG------ 321
           WG    GRLG G       P +       ++  +ACG  HT  +T SG +Y  G      
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQ 97

Query: 322 -----DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
                D  Y +  L    +VS  +P+K+      IH   I+ G +H+A +T+ G L+ +G
Sbjct: 98  LGVSVDKNYTTEPL----EVSA-LPKKI------IH---IAAGYYHSAAITADGELYMWG 143

Query: 377 DGSFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
             S G LG G   +   S+P +VE L G+    V+ G  H+   V ATD           
Sbjct: 144 KNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHS---VAATDQ---------- 190

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLF---------PECVAPLIDENICQVACGHDLSVALT 485
            G+  +WG G  GRLGHG +   L          P  +  L    +  VA G   S  + 
Sbjct: 191 -GEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACID 249

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            +G V+  G  A  + G   A       +  E+  S  ++VACG YH   ++S+ +++TW
Sbjct: 250 ENGSVFIFGERAMDKFGFREAKNATAPSMISELPYS--KQVACGGYHTCVISSSGELFTW 307

Query: 546 GKGANGQLGHGDKDNRNSPTLVD--FLKDKQVKRVVCGLNFTAII 588
           G   NG LG G  +  + P  ++  F K+  V +V CG   TA I
Sbjct: 308 GSNENGCLGMGFMETIHFPERIEGPFSKNP-VSQVSCGWKHTAAI 351



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 120/253 (47%), Gaps = 21/253 (8%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           IS+  V   S H  A  D    G+   WG G  +G LG G       F R +    P+ +
Sbjct: 172 ISIKMVALGSEHSVAATD---QGEALSWGAG-GSGRLGHGHESSLLGFFRTSSEYRPRLI 227

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
                + V N+A G  H+  + + G +F +GE +  + G     + + P +I  L     
Sbjct: 228 RRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELP--YS 285

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
           + VACG YHTC ++ SG+L+TWG  +  +G LG G   +   P ++ G      +S +SC
Sbjct: 286 KQVACGGYHTCVISSSGELFTWG--SNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSC 343

Query: 359 GLWHTAVVTSAGHLFTFGDG------------SFGALGHGDHISTSIPREVETLRGLRTT 406
           G  HTA + S G++FT+G G            S G LG G  +    P+ VE    +R  
Sbjct: 344 GWKHTAAI-SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRAL 402

Query: 407 RVSCGVWHTAAVV 419
           +VSCG  HT A++
Sbjct: 403 QVSCGFNHTGAIL 415



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 58/310 (18%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTMALDVHNIACGARHAVLV 259
           G++++WG+  +NG LG G+        +  +A+ +P  VE    + +  +A G+ H+V  
Sbjct: 137 GELYMWGKN-SNGQLGLGK--------KAANAVSVPSKVECLNGISIKMVALGSEHSVAA 187

Query: 260 TKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSGVNVELVACGEYHTCA 310
           T QGE  SWG    GRLGHG E+ +           P+LI  L G+ V+ VA G  H+  
Sbjct: 188 TDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSAC 247

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY---ISCGLWHTAVVT 367
           +  +G ++ +G+   +    G     +   P  +S       L Y   ++CG +HT V++
Sbjct: 248 IDENGSVFIFGERAMDK--FGFREAKNATAPSMIS------ELPYSKQVACGGYHTCVIS 299

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           S+G LFT+G    G LG G   +   P  +E        ++VSCG  HTAA+        
Sbjct: 300 SSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI-------- 351

Query: 427 SSPSGSTSCGKLFTWGDGDK------------GRLGHGDKEPRLFPECVAPLIDENICQV 474
                  S G +FTWG G              G+LG G     + P+ V         QV
Sbjct: 352 -------SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQV 404

Query: 475 ACGHDLSVAL 484
           +CG + + A+
Sbjct: 405 SCGFNHTGAI 414


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 171/373 (45%), Gaps = 45/373 (12%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V  WG G  +G LG              +  L   V++    +V ++  G+R+++ +   
Sbjct: 7   VIAWGSG-EDGQLG---------LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD 56

Query: 263 GEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           G++F+WG    G LGH  E    S P L++ L+ V +   A G +H  AV   G  Y WG
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116

Query: 322 DGTY-------NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
              Y       +    G   +    IP++ +  L    +  ++ G  H+ V+T  G+++T
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT---VRQVAAGGTHSVVLTREGYVWT 173

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G         GD    S+P  V+ L  +R   ++ G +H  A+                
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLAL--------------KE 213

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G L+ WG+ + G+LG GD +PR +P  V  L D  +  +A G   S ALT  G VY  G
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273

Query: 495 SAAYGQLGVPVAD---GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
              +G+LG    D    ++P +V+    E  + +V+CG  H  ALT   +++++G+G +G
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFGRGDHG 332

Query: 552 QLGHGDKDNRNSP 564
           +LG+G K     P
Sbjct: 333 RLGYGRKVTTGQP 345



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 27/324 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + +WG    G+LG G + +     +++ L   NV  V  G  ++ A+   G L+TWG   
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--- 63

Query: 325 YNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
           +N  G LGH  +        +  +L  + +   + G WH   V   G  + +G   +G  
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123

Query: 384 GHGDHISTSIPREVETLRGLRTTRV---SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G         P + ET R +R   V    C    T   V A  + S      T  G ++T
Sbjct: 124 G-------EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVV---LTREGYVWT 173

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG         GD +    P  V  L  EN+  +A G   ++AL   G ++  G+  YGQ
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG         P  V G + +  + ++A G +H  ALT+  +VY WG+G +G+LG GD D
Sbjct: 228 LGTGDTQPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 560 --NRNSPTLVDFLKDKQVKRVVCG 581
             ++  P  V+ L  + + +V CG
Sbjct: 287 KSSKMLPQKVNLLAGEDIIQVSCG 310



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 1/153 (0%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + + + G +++WG    G+LG G     S+P  ++ L  + +  +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +H+ A+T  G++Y WG G +     G   K S  +P+KV+  L G  +  +SCG  H+ 
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSV 315

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
            +T  G +F+FG G  G LG+G  ++T  P E+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 31/195 (15%)

Query: 108 PFDFGDIQGTQVP-----LDNVSNNGLGKAFADIISYTE----AANTNSRADSVSFSPSP 158
           P+  GDI+   VP     L+NV    +G AF ++    +    A   N      +    P
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVG-AFHNLALKEDGTLWAWGNNEYGQLGTGDTQP 235

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG 218
            +   P    D         ++L  + +   H +A     + G+V+ WG G         
Sbjct: 236 RSYPIPVQGLDD--------LTLVDIAAGGWHSTA---LTNEGEVYGWGRG--------- 275

Query: 219 EH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           EH R+G+  + ++  +LP+ V      D+  ++CG  H+V +T+ G IFS+G    GRLG
Sbjct: 276 EHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 278 HGREADVSHPQLIEI 292
           +GR+     P  + I
Sbjct: 336 YGRKVTTGQPLELPI 350


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 149/324 (45%), Gaps = 50/324 (15%)

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V  V CG  H   +T +G++YTWG G +  G LGHG   S   PR V G L G+  + ++
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGF--GRLGHGDAHSLKAPRLVRGALVGVVCAQVA 59

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETL--RGLRTTRVS 409
           CG  +TA V++ G L+T+G G  G LG GD+           PR ++    R +R   V 
Sbjct: 60  CGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVG 119

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE------------PR 457
            G +HT A+V   D              ++TWG    G+LG+ + +            PR
Sbjct: 120 PGGYHTVALVSPAD--------------VYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPR 165

Query: 458 LFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV------PVADGLVP 511
             P  V  +    + +V  G   +  LT  G  Y  G    GQLG+      P  +   P
Sbjct: 166 --PRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHP 223

Query: 512 TRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
            + D  + +      V ++ACG  H  ALT   +V++ G G  GQLGHG+ DN   P +V
Sbjct: 224 YQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVV 283

Query: 568 DFLK--DKQVKRVVCGLNFTAIIC 589
             LK   + V  V CG N T ++C
Sbjct: 284 SRLKASRRDVLEVACGNNGTLVLC 307



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 147/314 (46%), Gaps = 46/314 (14%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE-ILSGVNVELVACG 304
           V  + CG +HA ++T  GE+++WG    GRLGHG    +  P+L+   L GV    VACG
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61

Query: 305 EYHTCAVTRSGDLYTWGDGTYNS-GL---LGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
             +T AV+  G LYTWG G     GL    GHG+      PR +     G  +  IS G 
Sbjct: 62  FAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDA-FGGRAVREISVGP 120

Query: 361 --WHTAVVTSAGHLFTFGDGSFGALGH-----------GDHISTSIPREVETLRGLRTTR 407
             +HT  + S   ++T+G    G LG+           G H     PR V+++ GLR  R
Sbjct: 121 GGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHF-VPRPRRVDSVSGLRVRR 179

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP-- 465
           V  G  HTA +        ++   +  CG+ F      +G+LG GD E     E   P  
Sbjct: 180 VVAGWGHTALL--------TAEGAAYVCGRNF------QGQLGLGDPESFPHNERGHPYQ 225

Query: 466 ----LID----ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGE 517
               L+D    + + Q+ACG + SVALT  G V++ G+   GQLG    D     RV   
Sbjct: 226 PDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSR 285

Query: 518 IAESF--VEEVACG 529
           +  S   V EVACG
Sbjct: 286 LKASRRDVLEVACG 299



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG--ARHAVL 258
           G ++ WG G  NG LG G++          D L P+ +++     V  I+ G    H V 
Sbjct: 72  GALYTWGAG-ENGRLGLGDYT---GHGAAADVLTPRPLDAFGGRAVREISVGPGGYHTVA 127

Query: 259 VTKQGEIFSWGEESGGRLGH------GREADVSH----PQLIEILSGVNVELVACGEYHT 308
           +    ++++WG    G+LG+       R  + +H    P+ ++ +SG+ V  V  G  HT
Sbjct: 128 LVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHT 187

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN-----------LDGIHLSYIS 357
             +T  G  Y  G      G LG G   S   P    G+           L    ++ I+
Sbjct: 188 ALLTAEGAAYVCGRNF--QGQLGLGDPES--FPHNERGHPYQPDFRLLDRLGAKRVAQIA 243

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR--TTRVSCG 411
           CG  H+  +T  G + + G G+ G LGHG+  +   PR V  L+  R     V+CG
Sbjct: 244 CGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACG 299



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 11/73 (15%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI-----------EILS 294
           V  IACG  H+V +T+ GE+ S G  + G+LGHG   +   P+++           E+  
Sbjct: 239 VAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVAC 298

Query: 295 GVNVELVACGEYH 307
           G N  LV CG ++
Sbjct: 299 GNNGTLVLCGYFN 311


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 155/359 (43%), Gaps = 30/359 (8%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQ 288
           TD+  P +V       +  +A GA H++ VT  G   +WG+ + G+LG G      S P 
Sbjct: 79  TDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPV 138

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            +++ +G  V  ++ G  H  AVT +G    WGD  +  G LG GS      P  V  N+
Sbjct: 139 AVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFW--GQLGDGSTTRSRTPVAV--NV 194

Query: 349 D-GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
             G  ++ ++ G  H+  VTSAG    +GD S G LG G    +SIP   +   G   T 
Sbjct: 195 PAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITA 254

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+ G  H+ A+              TS G +  WG    G+LG G       P  V    
Sbjct: 255 VAAGGLHSLAL--------------TSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPA 300

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-----PTRVDGEIAESF 522
              +  VA G   S+A+T++G V   G    GQLG    DG       P  V+   A + 
Sbjct: 301 GTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLG----DGSTTHSSTPVAVN-VPAGTT 355

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +  VA G+ H  A+TST     WG    GQLG G   +   P  VD      V  +  G
Sbjct: 356 ITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGG 414



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 136/327 (41%), Gaps = 28/327 (8%)

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G   +WG  S GRLG G   D S P  + + +G  +  VA G  H+ AVT +G    W
Sbjct: 58  PPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAW 117

Query: 321 GDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           GD  +  G LG G+ + S   P  V     G  ++ +S G  H   VTSAG    +GD  
Sbjct: 118 GDNAF--GQLGDGTTIPSSSTPVAVD-VPAGTTVTALSGGGVHNLAVTSAGTALAWGDNF 174

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LG G    +  P  V    G   T V+ G  H+ AV              TS G   
Sbjct: 175 WGQLGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAV--------------TSAGTAL 220

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WGD   G+LG G       P          I  VA G   S+ALT+ G V   G+   G
Sbjct: 221 AWGDNSSGQLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSG 280

Query: 500 QLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           QLG    DG       P  VD   A + V  VA G  H  A+TS   V  WG    GQLG
Sbjct: 281 QLG----DGTTTSSSTPVAVD-VPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLG 335

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G   + ++P  V+      +  V  G
Sbjct: 336 DGSTTHSSTPVAVNVPAGTTITAVATG 362



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 168/387 (43%), Gaps = 39/387 (10%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           D +   SS+  +  +   + +++ + G+ H     S G    WG+   N F   G+   G
Sbjct: 75  DGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGD---NAF---GQLGDG 128

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
            +    +    P AV+      V  ++ G  H + VT  G   +WG+   G+LG G    
Sbjct: 129 TTIPSSS---TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTR 185

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P  + + +G  +  VA G+ H+ AVT +G    WGD   +SG LG G+     IP  
Sbjct: 186 SRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGD--NSSGQLGDGTATDSSIP-- 241

Query: 344 VSGNLD-GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           V+ ++  G  ++ ++ G  H+  +TS G +  +G    G LG G   S+S P  V+   G
Sbjct: 242 VAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAG 301

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
              T V+ G  H+ AV              TS G +  WGD   G+LG G       P  
Sbjct: 302 TTVTAVAAGGRHSLAV--------------TSAGDVLAWGDNTAGQLGDGSTTHSSTPVA 347

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGE 517
           V       I  VA G   S+A+T++      G   +GQLG    DG     ++P  VD  
Sbjct: 348 VNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLG----DGSTTSSIIPVAVD-L 402

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYT 544
            A + V  +A G++H  A+  ++   T
Sbjct: 403 PAGTTVTAIAGGSFHSLAIVPSTSTTT 429


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 170/362 (46%), Gaps = 56/362 (15%)

Query: 243 ALDVHNI---ACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNV 298
           ALD   I   +CG  H++ V +QG++F+WG   GG+LG G  EA V  P+LI+ L    +
Sbjct: 79  ALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRI 138

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYIS 357
             V CG  H  A+++ G L+TWG  T  SG LG G  + S   P+ +  +L GI L+ I+
Sbjct: 139 AQVMCGNQHCIALSKDGQLFTWGQNT--SGQLGLGKGEPSKLFPQPLK-SLAGIPLAKIT 195

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  H+  ++ +G +F +G    G LG  D    ++P  ++ LR  +   +SCG  HTAA
Sbjct: 196 AGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAA 255

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ-VAC 476
           +       S+S    TS G+                        C  P      CQ + C
Sbjct: 256 LT-KVRIRSASQCFRTSGGR------------------------CSNPFF----CQRIGC 286

Query: 477 GHDLSVA----LTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAY 531
            H   V     L   G ++T G  ++GQLG    ++ L+P RV  E+  + V ++ CG +
Sbjct: 287 SHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVL-ELMGTEVSQITCGRH 345

Query: 532 HVAALTSTSKV-YTWGKGANGQLGHGDKDNRNS--PTLVDFL---------KDKQVKRVV 579
           H  A   +S V Y +G  ++GQLG G+        P  ++ L         K   V ++ 
Sbjct: 346 HTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKIT 405

Query: 580 CG 581
           CG
Sbjct: 406 CG 407



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 155/367 (42%), Gaps = 66/367 (17%)

Query: 265 IFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +  WG+   G+LG   E + +  P+   + SG  ++   CG  H+  +   G +YT G  
Sbjct: 1   MLCWGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSN 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
               G LGH    +   P  V G LD   ++ +SCG  H+  V   G +F +G G  G L
Sbjct: 61  --GCGQLGHNKPGTS--PELV-GALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQL 115

Query: 384 GHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G G    +  IPR ++ L   R  +V CG  H  A+              +  G+LFTWG
Sbjct: 116 GLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIAL--------------SKDGQLFTWG 161

Query: 443 DGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
               G+LG G  EP +LFP+ +  L    + ++  G D S AL+ SG V+  G    GQL
Sbjct: 162 QNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQL 221

Query: 502 GV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST--------------------- 539
           G+  + D  VP  +    ++  V  ++CG  H AALT                       
Sbjct: 222 GLNDIQDRAVPCHIKFLRSQKVV-HISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFF 280

Query: 540 ---------------------SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
                                  ++T+G G+ GQLGHG   N   P  V  L   +V ++
Sbjct: 281 CQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQI 340

Query: 579 VCGLNFT 585
            CG + T
Sbjct: 341 TCGRHHT 347



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 161/379 (42%), Gaps = 86/379 (22%)

Query: 164 PDNSNDRSSAAETFRISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRV 222
           P  S +   A +T RI+L S       G AH    +  G VF WG G       GG+  +
Sbjct: 70  PGTSPELVGALDTQRITLVSC------GQAHSMAVNEQGQVFAWGAG------DGGQLGL 117

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-E 281
           G   + +    +P+ ++      +  + CG +H + ++K G++F+WG+ + G+LG G+ E
Sbjct: 118 G---TTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                PQ ++ L+G+ +  +  G  H+ A++ SG ++ WG     +G LG        +P
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKN--KAGQLGLNDIQDRAVP 232

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSA-------------------------------- 369
             +   L    + +ISCG  HTA +T                                  
Sbjct: 233 CHIK-FLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTR 291

Query: 370 ----------GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                     G LFTFGDGS+G LGHG   +  +PR V  L G   ++++CG  HT A  
Sbjct: 292 VTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAF- 350

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDEN------- 470
                       + S G ++ +G    G+LG G+   E  L+P  +  L   N       
Sbjct: 351 ------------APSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKK 398

Query: 471 --ICQVACGHDLSVALTTS 487
             + ++ CG D S  L ++
Sbjct: 399 YSVTKITCGGDHSFLLYSN 417



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 122/264 (46%), Gaps = 28/264 (10%)

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG  H+  +   G ++T G    G LGH    ++  P  V  L   R T VSCG  H+ A
Sbjct: 40  CGGQHSVFLLHDGSVYTCGSNGCGQLGHNKPGTS--PELVGALDTQRITLVSCGQAHSMA 97

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC 476
           V                 G++F WG GD G+LG G  E  +  P  +  L D  I QV C
Sbjct: 98  V--------------NEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMC 143

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYH 532
           G+   +AL+  G ++T G    GQLG+   +   P+++  +  +S     + ++  G  H
Sbjct: 144 GNQHCIALSKDGQLFTWGQNTSGQLGLGKGE---PSKLFPQPLKSLAGIPLAKITAGGDH 200

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
             AL+ +  V+ WGK   GQLG  D  +R  P  + FL+ ++V  + CG   TA +   +
Sbjct: 201 SFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVR 260

Query: 593 WVSSVDHSVCSS---CHNPFGFRR 613
            + S      +S   C NPF  +R
Sbjct: 261 -IRSASQCFRTSGGRCSNPFFCQR 283


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 170/376 (45%), Gaps = 35/376 (9%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V  WG+   +G LG G           TD   P AV S +   V  IA G  H   
Sbjct: 186 SSGGVMCWGDNW-SGQLGDGT---------TTDRSTPVAV-SGLGSGVTAIAAGGSHTCA 234

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +   G ++ WG+   G+LG G   D S P  +  L+   V  +A G +HTCA T SG + 
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAAGGFHTCARTSSGGVM 293

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG     SG LG G+  +   P  VSG   G+  + I+ G  HT  +TS+G ++ +G  
Sbjct: 294 CWG--ANWSGQLGDGTTTARSTPVAVSGLASGV--TAIAAGDSHTCALTSSGGVWCWGYN 349

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
            FG LG G     S P  V  L G   T ++ G +HT A++              S G +
Sbjct: 350 FFGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCALM--------------SSGGV 394

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
             WG    G+LG G    R  P  V+ L+   +  +A G D + A T+SG V   G    
Sbjct: 395 RCWGRNKDGQLGDGTTTTRSTPVAVSGLV-SGVTAIAAGDDHTCARTSSGGVMCWGDNWS 453

Query: 499 GQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG     D   P  V G    S V  +A G  H  AL S+  V+ WG+ ++GQLG G 
Sbjct: 454 GQLGDGTTTDRSTPVAVSGL--GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGT 511

Query: 558 KDNRNSPTLVDFLKDK 573
             +R +P  V  L  +
Sbjct: 512 TTDRGTPVAVSGLPSE 527



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 173/388 (44%), Gaps = 36/388 (9%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V++ + G AH     S G V  WG    NGF   G+   G +  R T    P AV S + 
Sbjct: 69  VTAIAAGGAHTCALTSSGGVMCWGR---NGF---GQLGDGTTTDRST----PVAV-SGLT 117

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V  IA G  H   +   G +  WG+   G+LG G   D S P  +  L+   V  +A 
Sbjct: 118 SGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAA 176

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+ HTCA T SG +  WGD    SG LG G+      P  VSG   G+  + I+ G  HT
Sbjct: 177 GDDHTCARTSSGGVMCWGD--NWSGQLGDGTTTDRSTPVAVSGLGSGV--TAIAAGGSHT 232

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             + S+G ++ +GD   G LG G     S P  V  L     T ++ G +HT A      
Sbjct: 233 CALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAAGGFHTCA------ 285

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    TS G +  WG    G+LG G    R  P  V+ L    +  +A G   + A
Sbjct: 286 --------RTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLA-SGVTAIAAGDSHTCA 336

Query: 484 LTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           LT+SG V+  G   +GQLG     D   P  V G    S V  +A G +H  AL S+  V
Sbjct: 337 LTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL--GSGVTAIAAGDFHTCALMSSGGV 394

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             WG+  +GQLG G    R++P  V  L
Sbjct: 395 RCWGRNKDGQLGDGTTTTRSTPVAVSGL 422



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 164/366 (44%), Gaps = 41/366 (11%)

Query: 217 GGEHRVGYSFSRQ------TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGE 270
           GG    GY+F  Q      TD   P AV S +   V  IA G  H   +   G +  WG 
Sbjct: 341 GGVWCWGYNFFGQLGDGTTTDRSTPVAV-SGLGSGVTAIAAGDFHTCALMSSGGVRCWGR 399

Query: 271 ESGGRLGHGREADVSHPQLIE-ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGL 329
              G+LG G     S P  +  ++SGV    +A G+ HTCA T SG +  WGD    SG 
Sbjct: 400 NKDGQLGDGTTTTRSTPVAVSGLVSGVTA--IAAGDDHTCARTSSGGVMCWGD--NWSGQ 455

Query: 330 LGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
           LG G+      P  VSG   G+  + I+ G  HT  + S+G ++ +G  S G LG G   
Sbjct: 456 LGDGTTTDRSTPVAVSGLGSGV--TAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTT 513

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
               P  V  L    T   S GV HT A+              TS G +  WG    G+L
Sbjct: 514 DRGTPVAVSGLPSEVTAIASGGV-HTCAL--------------TSSGGVMCWGANWSGQL 558

Query: 450 GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
           G G    R  P  V+ L    +  +A G   + ALT+SG V+  G+ + GQLG    DG 
Sbjct: 559 GDGTTTARSTPVAVSGL-PSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLG----DGT 613

Query: 510 V-----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
                 P  V G    S V  +A G++H  ALTS+  V+ WG   +GQLG G   + ++P
Sbjct: 614 TTARSTPVAVSGL--PSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTP 671

Query: 565 TLVDFL 570
             V  L
Sbjct: 672 VAVSGL 677



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 174/394 (44%), Gaps = 39/394 (9%)

Query: 168 NDRSSAAETFRISLSSVVSSSSHGSAHEDFD----SLGDVFIWGEGIANGFLGGGEHRVG 223
            D ++   +  +++S +VS  +  +A +D      S G V  WG+   +G LG G     
Sbjct: 406 GDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNW-SGQLGDGT---- 460

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
                 TD   P AV S +   V  IA G  H   +   G ++ WG  S G+LG G   D
Sbjct: 461 -----TTDRSTPVAV-SGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK 343
              P  +  L    V  +A G  HTCA+T SG +  WG     SG LG G+  +   P  
Sbjct: 515 RGTPVAVSGLP-SEVTAIASGGVHTCALTSSGGVMCWG--ANWSGQLGDGTTTARSTPVA 571

Query: 344 VSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           VSG   G+    I+ G  HT  +TS+G ++ +G  S G LG G   + S P  V  L   
Sbjct: 572 VSGLPSGVM--AIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLP-S 628

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
             T ++ G +HT A+              TS G ++ WG    G+LG G       P  V
Sbjct: 629 GVTAIAAGSFHTCAL--------------TSSGGVWCWGANWSGQLGDGSYTDSSTPVAV 674

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF 522
           + L    +  +A G   + A T SG V+   S  YGQLG     D   P  V G +  S 
Sbjct: 675 SGL-PSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLV--SG 731

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           V  +A G  H  A TS+  V  WG  ++GQLG G
Sbjct: 732 VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 148/337 (43%), Gaps = 25/337 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P AV S +   V  IA G  H    T  G +  WG+   G+LG G   D S P  +  L 
Sbjct: 416 PVAV-SGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL- 473

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           G  V  +A G  HTCA+  SG ++ WG    +SG LG G+      P  VSG      ++
Sbjct: 474 GSGVTAIAAGGSHTCALMSSGGVWCWGR--NSSGQLGDGTTTDRGTPVAVSGLPS--EVT 529

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            I+ G  HT  +TS+G +  +G    G LG G   + S P  V  L       ++ G  H
Sbjct: 530 AIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLP-SGVMAIAAGDLH 588

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           T A+              TS G ++ WG    G+LG G    R  P  V+ L    +  +
Sbjct: 589 TCAL--------------TSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL-PSGVTAI 633

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G   + ALT+SG V+  G+   GQLG     D   P  V G    S V  +A G +H 
Sbjct: 634 AAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL--PSGVTAIAAGRFHT 691

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
            A T +  V+ W     GQLG G   + ++P  V  L
Sbjct: 692 CARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGL 728



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 457 RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVD 515
           RL     +PL  + +  +A G   + ALT+SG V   G   +GQLG     D   P  V 
Sbjct: 57  RLHTSSFSPL--QGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVS 114

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           G    S V  +A G  H  AL S+  V  WG   +GQLG G   +R++P  V  L 
Sbjct: 115 GL--TSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLA 168


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 159/321 (49%), Gaps = 32/321 (9%)

Query: 265 IFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           ++S G  +GGRLG   E A  +    +  L  V V+ +ACG  H   ++R+G +Y+WG  
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG-- 63

Query: 324 TYN-SGLLGHGSK-VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            YN S   GHG + +S W PR +   L+ + +  I+ G  H+  +T    +FT+G G  G
Sbjct: 64  -YNDSRQTGHGVEDLSDWEPRWIRA-LETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHG 121

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHGD      P  V+ L+G     + CG  +T A+              T  GK+  +
Sbjct: 122 QLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAI--------------TGTGKVLGF 167

Query: 442 GDGDKGRLGHGDKEPRL-----FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           G    G+LG+GD +  +      P  +  L    I Q   G + S+ L+ +G +Y++G A
Sbjct: 168 GSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYA 227

Query: 497 AYGQLGVPVAD----GLVPTRVDGEIAES--FVEEVACGAYHVAALTSTSKVYTWGKGAN 550
           A GQLG+P  +     L  T    E++    FV+ V+CG  H  AL+    VY+WG G N
Sbjct: 228 ANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGIN 287

Query: 551 GQLGHGDKDNRNSPTLVDFLK 571
             LGHG  ++  +P +V  L+
Sbjct: 288 WALGHGGTEDTFTPKMVAMLE 308



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 166/343 (48%), Gaps = 23/343 (6%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS--HPQLIEILSGVNVELV 301
           ++V ++ACG +H +L+++ G+++SWG     + GHG E D+S   P+ I  L  V V  +
Sbjct: 38  VEVKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVE-DLSDWEPRWIRALETVKVVQI 96

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A GE H+ A+T   +++TWG G +  G LGHG     W P  V G L G  +  I CG  
Sbjct: 97  AAGEDHSVALTDRSEVFTWGRGLH--GQLGHGDVSDVWFPFLVKG-LQGKGIKSIGCGYE 153

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           +T  +T  G +  FG  + G LG+GD +   I   V     L++            ++ A
Sbjct: 154 NTFAITGTGKVLGFGSAASGKLGNGD-VDGGIGGNVYLPVQLKSLA-------KFTIIQA 205

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE------NICQVA 475
           T   + S   S + G+L++ G    G+LG   +E           + E       +  V+
Sbjct: 206 TGGKNFSMFLSHT-GQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVS 264

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           CG   S+AL+  G VY+ GS     LG     D   P  V    A+  V  V+ G YH A
Sbjct: 265 CGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVS-VSAGGYHSA 323

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
           A+++T ++YTWG+   GQLG G   + +S   V  L  + + +
Sbjct: 324 AVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVILK 366



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 153/334 (45%), Gaps = 36/334 (10%)

Query: 223 GYSFSRQTDALL-------PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
           GY+ SRQT   +       P+ + +   + V  IA G  H+V +T + E+F+WG    G+
Sbjct: 63  GYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQ 122

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS- 334
           LGHG  +DV  P L++ L G  ++ + CG  +T A+T +G +   G G+  SG LG+G  
Sbjct: 123 LGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVL--GFGSAASGKLGNGDV 180

Query: 335 ----KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
                 + ++P ++  +L    +   + G   +  ++  G L++ G  + G LG      
Sbjct: 181 DGGIGGNVYLPVQLK-SLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLG------ 233

Query: 391 TSIP-REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
             IP  EVE+L  L  T     V H    V       S     +  G +++WG G    L
Sbjct: 234 --IPFEEVESLN-LPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWAL 290

Query: 450 GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP----- 504
           GHG  E    P+ VA L  +    V+ G   S A++ +G +YT G    GQLG       
Sbjct: 291 GHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDD 350

Query: 505 -VADGL--VPTRV--DGEIAES-FVEEVACGAYH 532
             AD +  +PTRV   G +  S     V CG  H
Sbjct: 351 HSADHVQRLPTRVILKGSVDSSEMAMRVGCGQCH 384



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 4/154 (2%)

Query: 438 LFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           +++ G G  GRLG  D+  R  F   +  L D  +  +ACG   ++ L+ +G VY+ G  
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 497 AYGQLGVPVAD--GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              Q G  V D     P  +   +    V ++A G  H  ALT  S+V+TWG+G +GQLG
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIR-ALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLG 124

Query: 555 HGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           HGD  +   P LV  L+ K +K + CG   T  I
Sbjct: 125 HGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAI 158


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 42/376 (11%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS-HPQL 289
           D   P+ +       + ++ACG  H + +T  G++ SWG  + G+LGHG     S +P+ 
Sbjct: 38  DEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKA 97

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +  L G  +  V+ G  H+  V+ +G ++T GDG++  G LGHG   S   P KVS  +D
Sbjct: 98  VTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSF--GQLGHGDHASHCSPVKVSCFVD 155

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHI-STSIPREVETLRGLRTTR 407
             H+  ++CG+ H+ V+     ++ FG G  G LG   D + S ++P+ V    G+    
Sbjct: 156 -QHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAG 214

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           ++    H+AAV V               G ++TWG G KG       E    P+C+   +
Sbjct: 215 IAANGDHSAAVSVD--------------GHVYTWGRGFKGF------EDARVPQCLNSSL 254

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----------VPVADGLVPTRVDGE 517
             N  +VA G + ++A++  G V  +G    G L           +P    +   +V G 
Sbjct: 255 --NFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG- 311

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF---LKDKQ 574
           +  + + ++A GA H   +T   ++ TWG G +GQLG GD  +R SP  V     L +  
Sbjct: 312 LDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAA 371

Query: 575 VKRVVCGLNFTAIICL 590
              V CG  FT  + +
Sbjct: 372 SVIVFCGSGFTFAVTM 387



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 80/362 (22%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           SLSS+ S +  G+      S G V  WG G  +G LG G           +++L PKAV 
Sbjct: 49  SLSSISSLACGGAHVIALTSAGKVLSWGRG-NSGQLGHG--------LVVSNSLYPKAVT 99

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
           S     + +++ G  H+  V+  G +F+ G+ S G+LGHG  A    P  +      +VE
Sbjct: 100 SLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVE 159

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            VACG  H+  + +   +Y +G G      + +    S  +P+ VSG  +G+ ++ I+  
Sbjct: 160 QVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSG-FEGVEIAGIAAN 218

Query: 360 LWHTAVVTSAGHLFTFGDGSFG-------------------ALG---------------- 384
             H+A V+  GH++T+G G  G                   ALG                
Sbjct: 219 GDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCML 278

Query: 385 ------------------HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
                             H  H+      +V  L G + T ++ G  H+  V        
Sbjct: 279 GGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIV-------- 330

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ---VACGHDLSVA 483
                 T  G++ TWG G+ G+LG GD   R+ P  V+   D N      V CG   + A
Sbjct: 331 ------TEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFA 384

Query: 484 LT 485
           +T
Sbjct: 385 VT 386


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 185/423 (43%), Gaps = 78/423 (18%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS---GVNVELVACGE 305
           I+ GA H  ++T +G +++WG+   G+LGHG     S P+L+E       + V  VA G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI--PRKV------------------- 344
            HT A+T  G++Y++G    +S  LG G+  S +   P+ V                   
Sbjct: 226 KHTVALTVCGNVYSFGGN--DSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283

Query: 345 ---------------SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
                          S  +D I    +SC    +A ++  G+L+T+G G  G LGHGD +
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRI--IKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSL 341

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
             S P++V +L G     +S G  H+ A+              T  G++F+WG G+ G+L
Sbjct: 342 MQSTPKQVMSLHGHTIVDMSLGGGHSMAL--------------TKRGEVFSWGRGENGQL 387

Query: 450 GHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---- 504
           GHG     ++ P+ +    ++ I  ++ G   S+A+ T+G ++  G   YG LGV     
Sbjct: 388 GHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLD 447

Query: 505 -VADGLVPTRVDGEI------------AESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            + D   P  +                 E F+  V+ G  H  A T    +Y+WG G+  
Sbjct: 448 SLGDINSPVLIKSLNNSNGSNNSNSSAGERFIN-VSSGFQHNVAQTENGDLYSWGCGSGN 506

Query: 552 QLGHGDKDNRNSP-TLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
           +LG  +++N+  P  L D   + +     CG     II   K + + D S  +  +   G
Sbjct: 507 RLGLANEENQLIPKKLNDRSNNSKPAFFSCG-EIITIIVEKKLIENSDTSTSTPINTSSG 565

Query: 611 FRR 613
             +
Sbjct: 566 ITK 568



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 133/303 (43%), Gaps = 40/303 (13%)

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V  ++ G  HT  +T  G LYTWGDG    G LGHG+  S   PR V        L  +S
Sbjct: 163 VVFISTGAIHTSIITDKGHLYTWGDGLL--GKLGHGTLESYSEPRLVEFFETKPSLRVVS 220

Query: 358 C--GLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST--SIPREV---------------- 397
              G  HT  +T  G++++FG      LG G+  S+  S P+ V                
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280

Query: 398 -------ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
                   TL   +  + S  +     +  +T+ S++     +  G L+TWG GD GRLG
Sbjct: 281 IIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAA----ISKLGYLYTWGRGDNGRLG 336

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL--GVPVADG 508
           HGD   +  P+ V  L    I  ++ G   S+ALT  G V++ G    GQL  G   +  
Sbjct: 337 HGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK----DNRNSP 564
           + P ++        ++ ++ G YH  A+ +   ++ WG+G  G LG         + NSP
Sbjct: 397 MTPKQIQA-FQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSP 455

Query: 565 TLV 567
            L+
Sbjct: 456 VLI 458



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 161/382 (42%), Gaps = 77/382 (20%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+G+  G LG G      +    ++  L +  E+  +L V ++A G +H V +T
Sbjct: 180 GHLYTWGDGLL-GKLGHG------TLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALT 232

Query: 261 KQGEIFSWGEESGGRLGHGR--EADVSHPQLIE----------------ILSGVNVEL-- 300
             G ++S+G     +LG G    +  S PQL+                 I+S     L  
Sbjct: 233 VCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFN 292

Query: 301 ---------------VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
                          ++C    + A+++ G LYTWG G  ++G LGHG  +    P++V 
Sbjct: 293 KQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRG--DNGRLGHGDSLMQSTPKQVM 350

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLR 404
             L G  +  +S G  H+  +T  G +F++G G  G LGHG   S  + P++++  +   
Sbjct: 351 S-LHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKT 409

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-------HGD-KEP 456
              +S G +H+ A+               + G +F WG GD G LG        GD   P
Sbjct: 410 IKVISAGGYHSIAI--------------DTNGSMFAWGRGDYGVLGVSSSLDSLGDINSP 455

Query: 457 RLFPECVAPLID--------ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG 508
            L                  E    V+ G   +VA T +G +Y+ G  +  +LG+   + 
Sbjct: 456 VLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEEN 515

Query: 509 -LVPTRVDGEIAESFVEEVACG 529
            L+P +++     S     +CG
Sbjct: 516 QLIPKKLNDRSNNSKPAFFSCG 537



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 27/182 (14%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+VF WG G  NG LG G      +F+ Q   + PK +++     +  I+ G  H++ + 
Sbjct: 374 GEVFSWGRG-ENGQLGHG------TFTSQ--QMTPKQIQAFQNKTIKVISAGGYHSIAID 424

Query: 261 KQGEIFSWGEESGGRLGHGRE----ADVSHPQLIE------------ILSGVNVELVACG 304
             G +F+WG    G LG         D++ P LI+              +G     V+ G
Sbjct: 425 TNGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSG 484

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
             H  A T +GDLY+WG G+ N   LG  ++ +  IP+K++   +    ++ SCG   T 
Sbjct: 485 FQHNVAQTENGDLYSWGCGSGNR--LGLANEENQLIPKKLNDRSNNSKPAFFSCGEIITI 542

Query: 365 VV 366
           +V
Sbjct: 543 IV 544



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 13/113 (11%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--- 522
            + E +  ++ G   +  +T  GH+YT G    G+LG     G + +  +  + E F   
Sbjct: 158 FLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLG----HGTLESYSEPRLVEFFETK 213

Query: 523 ----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN--RNSPTLVDF 569
               V  VA G  H  ALT    VY++G   + QLG G+  +   ++P LV F
Sbjct: 214 PSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTF 266


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 163/310 (52%), Gaps = 27/310 (8%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  ++CG +H + + + G + S G+   G+LG  R+++ S  + I  L    +  ++CG 
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLG--RKSNNSSIEQISSLEAQTIVDISCGT 93

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGLWHTA 364
            H+ AV+  G +Y+WGDG+   G LG G+  S  + P+K++G L    +  ISCG +H+ 
Sbjct: 94  NHSVAVSDEGSIYSWGDGS--EGQLGTGNLSSRNFTPKKITG-LFNTKIIQISCGNFHSL 150

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
            ++  G +F++G    G LG G   I+ + P+ V++L+G+   +V+ G   + A+ ++  
Sbjct: 151 ALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMS-- 208

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGH-GDKEPRLF-PECVAPLIDENICQVACGHDLS 481
                       G +F WG  + G+LG   D     F P  V  L +  +  ++CG + +
Sbjct: 209 ------------GTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHT 256

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYH-VAALTST 539
             L+  G VYT G   +GQLG    +   VP +++    +  V +VACG YH +  + S 
Sbjct: 257 AVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ--VSQVACGRYHTLLYVFSC 314

Query: 540 SKVYTWGKGA 549
           +++ ++GKG+
Sbjct: 315 NRIVSFGKGS 324



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 22/244 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+G + G LG G        +  +    PK +       +  I+CG  H++ ++
Sbjct: 103 GSIYSWGDG-SEGQLGTG--------NLSSRNFTPKKITGLFNTKIIQISCGNFHSLALS 153

Query: 261 KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G +FSWG+   G+LG G +  + + PQL++ L G+ +  V  G   + A++ SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFA 213

Query: 320 WGDGTYNSGLLGHGSKV--SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           WG    N+G LG  S      + P  V+ +L  + ++YISCG  HTAV++  G ++TFGD
Sbjct: 214 WGKN--NAGQLGFKSDPMKGTFKPHAVN-SLRNLGVAYISCGEEHTAVLSKDGSVYTFGD 270

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV------VATDSSSSSPSG 431
            + G LG      TS+P+++E   G + ++V+CG +HT   V      V+    S  P  
Sbjct: 271 DTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTLLYVFSCNRIVSFGKGSLRPQD 329

Query: 432 STSC 435
           +T C
Sbjct: 330 NTEC 333



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 152/324 (46%), Gaps = 28/324 (8%)

Query: 265 IFSWGEESGGRLG--HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           ++ WG+   G+L    G +  V   +     S   V+ V+CGE HT  +   G L + G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
             Y  G LG  S  S     ++S +L+   +  ISCG  H+  V+  G ++++GDGS G 
Sbjct: 61  NPY--GQLGRKSNNSSI--EQIS-SLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQ 115

Query: 383 LGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG G+  S +  P+++  L   +  ++SCG +H+ A+              +  G++F+W
Sbjct: 116 LGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLAL--------------SEDGRVFSW 161

Query: 442 GDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           G    G+LG G +   +  P+ V  L    + QV  G   S AL+ SG V+  G    GQ
Sbjct: 162 GQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQ 221

Query: 501 LGV---PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           LG    P+     P  V+  +    V  ++CG  H A L+    VYT+G   +GQLG   
Sbjct: 222 LGFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNS 280

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCG 581
            +  + P  ++     QV +V CG
Sbjct: 281 GNQTSVPQKIEDYAG-QVSQVACG 303



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 6/153 (3%)

Query: 438 LFTWGDGDKGRLG--HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           ++ WGD   G+L    G+KE   F E       E + +V+CG   ++ L   G + + G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             YGQLG    +  +  ++    A++ V+ ++CG  H  A++    +Y+WG G+ GQLG 
Sbjct: 61  NPYGQLGRKSNNSSI-EQISSLEAQTIVD-ISCGTNHSVAVSDEGSIYSWGDGSEGQLGT 118

Query: 556 GDKDNRN-SPTLVDFLKDKQVKRVVCGLNFTAI 587
           G+  +RN +P  +  L + ++ ++ CG NF ++
Sbjct: 119 GNLSSRNFTPKKITGLFNTKIIQISCG-NFHSL 150


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 34/370 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG     +    + + ++D 
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATPR-LGTIDE 412

Query: 600 SVCSSCHNPF 609
                 + P+
Sbjct: 413 PKFEDVYEPY 422



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTV---GKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV-VY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 404


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 177/362 (48%), Gaps = 39/362 (10%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWG-EESGGRLGHGREA----------DVSHPQLIEI 292
           ++V  +A G  H +++T  G+++S G  E G  L  G  A               +L+E 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60

Query: 293 LSGVNVE--LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           L G N+     + G  H  A+T +G ++++G      G LGHG + S   P++V   L  
Sbjct: 61  LRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNV--KGQLGHGDQTSINSPKQVEA-LSR 117

Query: 351 IHLSYISCGLWHTAV-VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
             ++ + C  +HT         +++ G   +G LG G+    + P  +E L G R   + 
Sbjct: 118 KFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIG 177

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLID 468
           CG +H+  VV + D            G++F++G  D G+LG    +  +  P+ V  L  
Sbjct: 178 CGQYHS--VVSSID------------GEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS 223

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV--ADGLVPTRVDGEIAESFVEEV 526
               Q+ACG+  +VA+  +G +Y+ G    GQLG+ +  A  ++PT V  ++ +  +  V
Sbjct: 224 T---QIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQEIVSV 278

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           ACG YH  AL    +++++G+ ++GQLG G  +N   P L+  L DK+V ++  G   + 
Sbjct: 279 ACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSI 338

Query: 587 II 588
           ++
Sbjct: 339 VL 340



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 7/185 (3%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG-HGREADVSHPQLIEIL 293
           P  +E+     + +I CG  H+V+ +  GEIFS+G    G+LG  G + ++S P+ ++ L
Sbjct: 162 PTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL 221

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
                  +ACG YHT A+  +G LY+WG    +SG LG G   +  I   +  +L+   +
Sbjct: 222 KSTQ---IACGYYHTVAIN-NGQLYSWGKN--DSGQLGIGIYSAKEILPTLVRDLEDQEI 275

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
             ++CG +HT  +  AG LF+FG  S G LG G   ++  P  ++ L   +  +++ G +
Sbjct: 276 VSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFY 335

Query: 414 HTAAV 418
           H+  +
Sbjct: 336 HSIVL 340



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 25/139 (17%)

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-------------------LV 510
           N+ QVA G++ ++ LT  G VY   S  Y ++G  ++ G                   LV
Sbjct: 2   NVIQVAAGNEHTLILTDCGDVY---SGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLV 58

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
                  I + F      G  HV ALT+  KV+++G    GQLGHGD+ + NSP  V+ L
Sbjct: 59  EKLRGKNIVKIFASN---GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEAL 115

Query: 571 KDKQVKRVVCGLNFTAIIC 589
             K V  V C    T   C
Sbjct: 116 SRKFVTAVGCSYYHTIFSC 134



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG+   +G LG G +            +LP  V      ++ ++ACG  H + + 
Sbjct: 239 GQLYSWGKN-DSGQLGIGIY--------SAKEILPTLVRDLEDQEIVSVACGCYHTLALG 289

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
             G++FS+G  S G+LG G   +   P LI+ L    V  +A G YH+  +
Sbjct: 290 YAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVL 340


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 32/261 (12%)

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
           ++ + +I+ G  ++  VT  G +++WG    G+LG G      +P++I  LS  ++  +A
Sbjct: 229 SIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIA 288

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLW 361
           CG  H  A+++SGDLYTWG G +  G LGHG   S   P+KV         +  ++ G  
Sbjct: 289 CGRQHMAAISKSGDLYTWGLGVF--GQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGAN 346

Query: 362 HTAVVTSAGHLFTFGDGSFGALG---------------HGDHISTSIPREVETLRGLRTT 406
            T  V+  G LF+FG G +G LG                 DH+  S+P++V+ L  ++  
Sbjct: 347 FTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVR 406

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +V+CG  HT AV    D              ++TWG G  G LG GD++ +L P+ V  L
Sbjct: 407 KVACGHLHTIAVTTDND--------------VYTWGWGSSGCLGFGDRKFQLVPQRVPSL 452

Query: 467 IDENICQVACGHDLSVALTTS 487
             E I  V+ G   ++ + +S
Sbjct: 453 SGEEISSVSGGEKHTLIVRSS 473



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 158/365 (43%), Gaps = 41/365 (11%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D L P  ++      +  IACG  H++ VT+ G+++SWG    G LGH ++A  + P LI
Sbjct: 21  DQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPALI 80

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWG-----DGTYNSGLLGHGSKVSCWIPRKVS 345
           + L    +  VACG YH+ A+T +G +Y WG     D T  SG+   G  V         
Sbjct: 81  KALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDAT-KSGVKSQGGLV--------- 130

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
             + GI  S+ S    H+  +   G    + + S          S+S+ ++  T  GL T
Sbjct: 131 -EMTGIK-SFASKVADHSLSMYLNGEKAAYDEES---------ASSSVLQDNPTANGLVT 179

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
                        +V T          +  G++          +  G K  +        
Sbjct: 180 DDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIK-------- 231

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE 525
                I  ++ G   S A+T++G+VYT G    GQLG+         RV   ++   +  
Sbjct: 232 -----IVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVN 286

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK--RVVCGLN 583
           +ACG  H+AA++ +  +YTWG G  GQLGHG   +   P  V + + +Q K  +V  G N
Sbjct: 287 IACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGAN 346

Query: 584 FTAII 588
           FT  +
Sbjct: 347 FTMAV 351



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 192/477 (40%), Gaps = 111/477 (23%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +  +    +H  A  +F   GDV+ WG G   G LG  +       +      L KA+E 
Sbjct: 36  IKQIACGEAHSLAVTEF---GDVYSWGRG-KEGELGHPQK------AMTAPPALIKALEH 85

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN--- 297
              + V   ACG  H++ +T  G+++ W        G   E D +        SGV    
Sbjct: 86  ERIVKV---ACGNYHSLALTDTGKVYQW--------GQLHEIDATK-------SGVKSQG 127

Query: 298 --VELVACGEY------HTCAVTRSGDLYTWGDGTYNSGLLGH----------------- 332
             VE+     +      H+ ++  +G+   + + + +S +L                   
Sbjct: 128 GLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEE 187

Query: 333 ------------------GSKVSCWI------PRKVSGNLDGIHLSYISCGLWHTAVVTS 368
                             GSKV   +      P  V      I +  IS G  ++A VTS
Sbjct: 188 FLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTS 247

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G+++T+G    G LG GD      PR + +L       ++CG  H AA+          
Sbjct: 248 TGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAI---------- 297

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN--ICQVACGHDLSVALTT 486
               +  G L+TWG G  G+LGHG  +  L P+ V     +   I QVA G + ++A++ 
Sbjct: 298 ----SKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSE 353

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF---------------VEEVACGAY 531
           +G +++ G   YGQLG       +    +G+  +                 V +VACG  
Sbjct: 354 NGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHL 413

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           H  A+T+ + VYTWG G++G LG GD+  +  P  V  L  +++  V  G   T I+
Sbjct: 414 HTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIV 470



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 59/110 (53%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           + ++G G +G+LG    + +L P  +  L  + I Q+ACG   S+A+T  G VY+ G   
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            G+LG P      P  +   +    + +VACG YH  ALT T KVY WG+
Sbjct: 63  EGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQ 112



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           + +FG G  G LG   +     P  ++ L+G R  +++CG  H+ AV             
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAV------------- 49

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G +++WG G +G LGH  K     P  +  L  E I +VACG+  S+ALT +G VY
Sbjct: 50  -TEFGDVYSWGRGKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVY 108

Query: 492 TMG 494
             G
Sbjct: 109 QWG 111



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%)

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           V + G    GQLG+ V    +   V   +    ++++ACG  H  A+T    VY+WG+G 
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            G+LGH  K     P L+  L+ +++ +V CG
Sbjct: 63  EGELGHPQKAMTAPPALIKALEHERIVKVACG 94



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTD------ALLPKAVESTMALDVHNIACGAR 254
           G++F +G G   G LG  E      ++   D        LPK V++  ++ V  +ACG  
Sbjct: 355 GELFSFGHG-EYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHL 413

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H + VT   ++++WG  S G LG G       PQ +  LSG  +  V+ GE HT  + RS
Sbjct: 414 HTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTL-IVRS 472

Query: 315 GDLYTWG 321
            D  T+ 
Sbjct: 473 SDTTTFA 479


>gi|68073201|ref|XP_678515.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56499009|emb|CAH95917.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 426

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 181/374 (48%), Gaps = 46/374 (12%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH------GREADVS-H 286
           LP+ + +     ++ ++ G  HA  +   G+I+++G    G+LG       G+E+ +S  
Sbjct: 61  LPEKISNFENKQINKLSAGCNHAAFIV-DGKIYTYGLNDKGQLGRTLSNEGGKESKISLT 119

Query: 287 PQLIEILSGVNVEL--VACGEYHTCAVTRSGDLYTWG-DGTYNSGL--LGHGSKVSCWIP 341
           P+ IE L   N++   V CG  HT AV  + DLY+WG  G +  G   LG G+K +   P
Sbjct: 120 PEEIE-LDNKNIKFKDVCCGYKHTLAVDVNNDLYSWGWGGNFFKGANGLGQGNKNNLMKP 178

Query: 342 RKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-- 398
           +K+   N D      I CG  H+  +T +G ++  G G FG LG G+H       E++  
Sbjct: 179 QKIEAFNNDNSEFINICCGEQHSLALTESGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYF 238

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH----GD- 453
           T   +    ++CG   +AA+              ++ G+++ WG  D G+LG     GD 
Sbjct: 239 TNNNIIIKDIACGNSFSAAL--------------SNNGEVYVWGRNDYGQLGIENSIGDL 284

Query: 454 KEPRLFPECVAPLIDENIC--QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
               ++P  V     ENI    +ACG +  +A + S  +Y  GS A+ +   P A  L P
Sbjct: 285 YSHEVYPNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWGSRAWLE---PKAITLNP 341

Query: 512 TRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV-- 567
              +  I ++ ++++  G   Y+ + L S +K+Y+WGK  +  L   DK N N PTLV  
Sbjct: 342 KYQNSLIKKN-IDKIQAGGSTYYYSMLLSDNKLYSWGKHNSSCLALKDKKNHNEPTLVDS 400

Query: 568 DFLKDKQVKRVVCG 581
           D   ++ +  + CG
Sbjct: 401 DLFNNEIICDISCG 414


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 162/331 (48%), Gaps = 45/331 (13%)

Query: 262 QGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           +G + S G    G LG G     +S    I  L    V  V+ G +H+  +T  G ++++
Sbjct: 2   RGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSF 61

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G+G +  G LGHG++ +C+ PR+++       ++ IS G  H+  +T  G  ++FG G F
Sbjct: 62  GNGLH--GRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 381 GALGHGDHISTSIPREVETLRGLRTT-----------------RVSCGVWHTAAVVVATD 423
           G LGHGD     +PRE+ TLRG   +                  V+ G +H+  +++ TD
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHS--LLLTTD 176

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                       G+++++G G  G LGHGD++ RL P  +  L D  I  +ACG   ++ 
Sbjct: 177 ------------GRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLV 224

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTS 538
           L   G V+  G   Y +      +G     L+P+ +   +AE  + EV  G  H   LT 
Sbjct: 225 LDDEGRVFFFG-LDYSEF-PKFTEGQARFVLLPSALG--LAEE-ITEVRAGEGHCLLLTR 279

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
             K+  +G G NG+LG GD+ NR +PT V F
Sbjct: 280 EGKLLAFGLGKNGRLGLGDETNRLAPTAVTF 310



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 176/379 (46%), Gaps = 51/379 (13%)

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTM-ALDVHNI---ACGARHAVLVTKQGEIFSWGEE 271
           GGG+H        Q DA+   +V + + AL+ H +   + G  H++++T++G +FS+G  
Sbjct: 9   GGGQH----GSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 272 SGGRLGHGREADVSHPQLIEIL-SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL 330
             GRLGHG E     P+ I    +   V  ++ G  H+ A+T+ G  Y++G G +  G L
Sbjct: 65  LHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF--GRL 122

Query: 331 GHGSKVSCWIPRKVSGNLDGIH---------------LSYISCGLWHTAVVTSAGHLFTF 375
           GHG +    +PR+++    G                 + +++ G +H+ ++T+ G +++F
Sbjct: 123 GHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSF 182

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G G  GALGHGD      P  +E L   R   ++CG   +A  +V  D            
Sbjct: 183 GAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACG---SANTLVLDDE----------- 228

Query: 436 GKLFTWG--DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           G++F +G    +  +   G     L P  +   + E I +V  G    + LT  G +   
Sbjct: 229 GRVFFFGLDYSEFPKFTEGQARFVLLPSALG--LAEEITEVRAGEGHCLLLTREGKLLAF 286

Query: 494 GSAAYGQLGV-PVADGLVPTRV--DGEIAESFVEEVACGAYHVAALTST----SKVYTWG 546
           G    G+LG+    + L PT V        S   ++ACGA H  AL        ++Y +G
Sbjct: 287 GLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFG 346

Query: 547 KGANGQLGHGDKDNRNSPT 565
            G  GQL +G + +R SPT
Sbjct: 347 SGDQGQLANGHRQDRASPT 365



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 32/230 (13%)

Query: 370 GHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G + + G G  G+LG GD ++  S+   +  L   R   VS G  H+  +          
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVL---------- 52

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-IDENICQVACGHDLSVALTTS 487
               T  G++F++G+G  GRLGHG++E    P  +A       + +++ G   S+ALT  
Sbjct: 53  ----TEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKD 108

Query: 488 GHVYTMGSAAYGQLG-VPVADGLVPT---------------RVDGEIAESFVEEVACGAY 531
           G  Y+ G   +G+LG     D L+P                RV+    +  +E VA G +
Sbjct: 109 GKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYF 168

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           H   LT+  +VY++G G  G LGHGD+D R  PT+++ L D+++  + CG
Sbjct: 169 HSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACG 218



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 38/272 (13%)

Query: 229 QTDALLPKAV----------------ESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
           +TD LLP+ +                E+     + ++A G  H++L+T  G ++S+G   
Sbjct: 127 ETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGV 186

Query: 273 GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
            G LGHG       P +IE L+   +  +ACG  +T  +   G ++ +G           
Sbjct: 187 MGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTE 246

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           G      +P  +    +   ++ +  G  H  ++T  G L  FG G  G LG GD  +  
Sbjct: 247 GQARFVLLPSALGLAEE---ITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRL 303

Query: 393 IPREVETLRGLRTTRV----SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
            P  V T     TT V    +CG  H  A+V   D     P       +L+ +G GD+G+
Sbjct: 304 APTAV-TFPSNGTTSVEIDIACGAKHGLALV---DVPGEGP-------RLYAFGSGDQGQ 352

Query: 449 LGHGDKEPRLFPEC----VAPLIDENICQVAC 476
           L +G ++ R  P      +  L+ ++I   A 
Sbjct: 353 LANGHRQDRASPTATTTSLPALLHQHIVPAAI 384


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 160/342 (46%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 100 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG   +   L     +P     I E + QVACG   +V L
Sbjct: 206 ----TMDGELYTFGEPENGKLGLPSE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 259 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 315

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 78  PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 136

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 137 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTV---GKP 191

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG    +  +  R  + + G+  R  +V+C
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPSELLMN-HRSPQRVLGIPERVIQVAC 250

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 251 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 292

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 293 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 351

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 352 QLIACGGCHMLVFAT 366



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 159 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 207 MDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEKV-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 265 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 366


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 161/332 (48%), Gaps = 44/332 (13%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVS-HPQLIEILSGVNVELVA 302
           V +IA G RH + ++  G+++S G    G LG G  RE   + +P  + I S V++  ++
Sbjct: 49  VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYP--VHISSTVSIIQIS 106

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            G  H+ AV+  G L+ WG  ++   L   G  ++   P++V    + +    ++CG  H
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQ-LAMSGDILASDTPKRVPSLPETVQ---VACGASH 162

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           T  +   G +F +G  S G + H        P EVE    +   ++S G   T A+    
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRHS-------PAEVEIFISIPIVQISAGNLFTMAL---- 211

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     T+ G LF WG  ++G+LG    +  + P C  P I+ ++  V CG   S+
Sbjct: 212 ----------TASGTLFAWGKNEEGQLGDFTNKDVVNP-CAVPNIN-SVVAVECGDSHSI 259

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDG------EIAESFVEEVACGAYHVAAL 536
           ALT  G V++ GS ++GQLG        P R         E+  S V  +ACG  H   +
Sbjct: 260 ALTHEGRVFSCGSDSFGQLGCGQ-----PNRSQNCMRGITEMLGSHVTRIACGRCH-TIV 313

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD 568
            +  K++T+G  +NGQLGHG+  N+ +P ++D
Sbjct: 314 VANGKMHTFGLNSNGQLGHGNTRNQITPRVID 345



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 47/326 (14%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           +S+  + +  SH  A  D    G +F WG   ++G L       G   +  T   +P   
Sbjct: 100 VSIIQISAGRSHSMAVSDD---GRLFAWGSN-SHGQLAMS----GDILASDTPKRVPSLP 151

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
           E+        +ACGA H V +   G +F WG++S GR+ H        P  +EI   + +
Sbjct: 152 ETV------QVACGASHTVSLNGGGRVFIWGQQSDGRIRHS-------PAEVEIFISIPI 198

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC 358
             ++ G   T A+T SG L+ WG      G LG  +      P  V  N++ +    + C
Sbjct: 199 VQISAGNLFTMALTASGTLFAWGKN--EEGQLGDFTNKDVVNPCAVP-NINSV--VAVEC 253

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           G  H+  +T  G +F+ G  SFG LG G  + S +  R +  + G   TR++CG  HT  
Sbjct: 254 GDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHT-- 311

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +VVA              GK+ T+G    G+LGHG+   ++ P  +  +  EN+  V  G
Sbjct: 312 IVVAN-------------GKMHTFGLNSNGQLGHGNTRNQITPRVIDSV--ENVASVFAG 356

Query: 478 HDLSVALTT-SGHVYTM--GSAAYGQ 500
            D S  L   + H Y +  G ++Y Q
Sbjct: 357 WDQSFCLQIHTKHAYDVLSGPSSYLQ 382


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 152/317 (47%), Gaps = 24/317 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V  ++    HA  V + GE+F+ G+ S    GHG     +  P+L+E L GV  + VA G
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAG 224

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLWHT 363
              T  +T  G +YT G  T+  G LGHG  V    P+ V   L+G+  +  I+ G  + 
Sbjct: 225 LSFTVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYA 281

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVA 421
             VT  G + +FG GS   LGHG+  +   PR +++ R   +   R+S G  H    VVA
Sbjct: 282 MAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEH----VVA 337

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
            DSS          G ++TWG G  G LGHGD+  +  PE ++ L      QV      +
Sbjct: 338 LDSS----------GFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKT 387

Query: 482 VALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             L  +G VY  G   +G LG P    +D ++   +   +   ++ +++ G YH  A+ +
Sbjct: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNN 447

Query: 539 TSKVYTWGKGANGQLGH 555
             +++ +G     QLGH
Sbjct: 448 KGQIFGFGDNERAQLGH 464



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 25/295 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ VE+   +    +A G    V +T +G +++ G  + G+LGHG   D   P+++E+L 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIH 352
           GV  V  +A G  +  AVT  G ++++G G+  +  LGHG + +   PR + S     IH
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGS--NFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  IS G  H   + S+G ++T+G G  GALGHGD I  + P  + +L+     +V C  
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQV-CAR 383

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTW-GDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
                V+V T S              F W G G  G    G  +  + P  +  L    I
Sbjct: 384 KRKTFVLVDTGSVYG-----------FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYI 432

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEE 525
            Q++ G   +VA+   G ++  G     QLG     G  VPT       E FV+E
Sbjct: 433 SQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPT-------EIFVQE 480



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 15/178 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A ++FR     VV  S+        DS G V+ WG+G   G LG G+         +
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYC-GALGHGD---------E 360

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D   P+ + S  +     +    R   ++   G ++ +G    G LG    G    V  
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P +++ L G  +  ++ G YHT AV   G ++ +GD       LGH +   C +P ++
Sbjct: 421 PWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDN--ERAQLGHDTLRGCPVPTEI 476


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 159/346 (45%), Gaps = 41/346 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           +ACG  H  ++T   +++ +G    G+LG G ++ V  P  ++ L    V+ VACG  HT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +           +S G   +A +T 
Sbjct: 94  LVSTEGGKVYAVGGN--NEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTE 151

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +G+ S G +G  +  +   P EV    G     +SCG +H+A V +        
Sbjct: 152 DGKLFMWGENSEGQIGLNNVCNVYFPHEVTV--GKPIAWISCGYYHSAFVTME------- 202

Query: 429 PSGSTSCGKLFTWGDGDKGRLG------HGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                  G+L+T+G+ + G+LG         K P+L      P I E + QVACG   +V
Sbjct: 203 -------GELYTFGEPEFGKLGLPKQLLMNHKVPQL-----VPGIPEKVIQVACGGGHTV 250

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTS 538
            LT    VY  G   +GQLG+      V    + +I ES     +  ++CG  H A +T 
Sbjct: 251 VLTEKA-VYNFGLGQFGQLGLGT---FVFETTEPKIMESVKDHKITYISCGENHTALITD 306

Query: 539 TSKVYTWGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
             ++YT+G G  G+LG G ++  N+  PTL  +FL+ K V  V CG
Sbjct: 307 IGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFK-VHLVACG 351



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 45/323 (13%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V ++ACG  H ++ T+ G++++ G  + G+LG G   D +   LIE  +
Sbjct: 72  PTCVKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFT 131

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             +  + ++ G   + A+T  G L+ WG+ +   G +G  +  + + P +V+    G  +
Sbjct: 132 SQHQFKQLSAGSNTSAALTEDGKLFMWGENS--EGQIGLNNVCNVYFPHEVTV---GKPI 186

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI--STSIPREVETLRGLRTTRVSCG 411
           ++ISCG +H+A VT  G L+TFG+  FG LG    +  +  +P+ V  +   +  +V+CG
Sbjct: 187 AWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPE-KVIQVACG 245

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-----DKEPRLFPECVAPL 466
             HT   VV T+ +            ++ +G G  G+LG G       EP++    +  +
Sbjct: 246 GGHT---VVLTEKA------------VYNFGLGQFGQLGLGTFVFETTEPKI----MESV 286

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESF- 522
            D  I  ++CG + +  +T  G +YT G   YG+LG+ +    +  VPT     +  +F 
Sbjct: 287 KDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPT-----LCPNFL 341

Query: 523 ---VEEVACGAYHVAALTSTSKV 542
              V  VACG  H+    +   V
Sbjct: 342 RFKVHLVACGGCHMVVFATPRPV 364



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            +ACG+ HT  +T +  LY +G   +  G LG GSK +   P  V   L    + +++CG
Sbjct: 33  FLACGDEHTAVITGNKKLYMFGRNDW--GQLGLGSKSAVCKPTCVKA-LKPEKVKHVACG 89

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAV 418
             HT V T  G ++  G  + G LG GD    +    +E      +  ++S G   +AA+
Sbjct: 90  RNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAAL 149

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T  GKLF WG+  +G++G  +     FP  V   + + I  ++CG+
Sbjct: 150 --------------TEDGKLFMWGENSEGQIGLNNVCNVYFPHEVT--VGKPIAWISCGY 193

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
             S  +T  G +YT G   +G+LG+P   + +  VP  V G I E  ++ VACG  H   
Sbjct: 194 YHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPG-IPEKVIQ-VACGGGHTVV 251

Query: 536 LTSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LT  + VY +G G  GQLG G        P +++ +KD ++  + CG N TA+I
Sbjct: 252 LTEKA-VYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALI 304



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WGE          E ++G   +   +   P  V  T+   +  I+CG  H+  VT
Sbjct: 153 GKLFMWGEN--------SEGQIG--LNNVCNVYFPHEV--TVGKPIAWISCGYYHSAFVT 200

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +GE++++GE   G+LG  ++  ++H  PQL+  +    ++ VACG  HT  +T    +Y
Sbjct: 201 MEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQ-VACGGGHTVVLTEKA-VY 258

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ V      K+  ++    ++YISCG  HTA++T  G ++TFGDG
Sbjct: 259 NFGLGQF--GQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDG 316

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +G LG G  +  +  +P         +   V+CG  H   VV AT
Sbjct: 317 RYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCH--MVVFAT 360


>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
 gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
          Length = 689

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 152/340 (44%), Gaps = 43/340 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEIL-SGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           +FSWG   GG         ++ P  +++  S   V  V+ G      VTR+G L  W   
Sbjct: 322 VFSWG---GG---------ITQPVKLQLPHSDTQVMQVSTGRTQKAGVTRNGRLIMWEVP 369

Query: 324 TY--NSGLLGHGSKVSC-WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           T   ++ + G     +  +IPR + G   G+ +  +SCG   TA +T  G L TFG G+ 
Sbjct: 370 TVATDAAMPGATDHAALQFIPRFLEGQ-SGVTIKQVSCGDLFTACLTDRGILMTFGSGTN 428

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHG        + VE L G   T VSCG  H  AV              T+  ++F+
Sbjct: 429 GCLGHGQTNDVQQAKIVEALLGFEVTLVSCGATHVMAV--------------TNEHEVFS 474

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG GD GRLG G++E    P+ V       +  V CG D S+ LTT   +   GS  + +
Sbjct: 475 WGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSILLTTDNRLLGCGSNRHNK 534

Query: 501 LGVPV--ADGLVPTRVD----------GEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           LG+ +  AD     ++D            +  + +  VA G  H AA+T + + YT+G  
Sbjct: 535 LGLDILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGAN 594

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              QLG+        P LV  L+D  +  V CG  FT  I
Sbjct: 595 NFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAI 634



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 180/431 (41%), Gaps = 39/431 (9%)

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
           PL+ + P  +  R S   + R   +SVV  SS   A      L  VF WG GI       
Sbjct: 280 PLS-SLPPVTRGRGSRVSSARSHRTSVVLDSSGNLAQPR--PLSSVFSWGGGI------- 329

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES----G 273
                    ++     LP +    M      ++ G      VT+ G +  W   +     
Sbjct: 330 ---------TQPVKLQLPHSDTQVM-----QVSTGRTQKAGVTRNGRLIMWEVPTVATDA 375

Query: 274 GRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
              G    A +   P+ +E  SGV ++ V+CG+  T  +T  G L T+G GT  +G LGH
Sbjct: 376 AMPGATDHAALQFIPRFLEGQSGVTIKQVSCGDLFTACLTDRGILMTFGSGT--NGCLGH 433

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           G        + V   L G  ++ +SCG  H   VT+   +F++G G  G LG G+  S S
Sbjct: 434 GQTNDVQQAKIVEALL-GFEVTLVSCGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYS 492

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL-FTWGDGDKGRLGH 451
            P+ V          V CGV    ++++ TD+      GS    KL       D      
Sbjct: 493 TPQPVPIPSPHLVKSVHCGV--DCSILLTTDNRLLG-CGSNRHNKLGLDILPADDSPSQQ 549

Query: 452 GDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
            D+     P   APL+   I  VA G   S A+T SG  YT G+  + QLG         
Sbjct: 550 IDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGANNFNQLGYQKDSKDRR 609

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
            ++   + +  +  V CG     A+T+  +VYTWGKG+ G+LG   ++N   P  V  L 
Sbjct: 610 PQLVPALEDVCISMVECGDTFTVAITTEGEVYTWGKGSRGRLGR-REENTKIPKPVPLLD 668

Query: 572 DK--QVKRVVC 580
            +  Q+  + C
Sbjct: 669 SEPFQIISISC 679



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 44/293 (15%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +  +G G  NG LG G+           D    K VE+ +  +V  ++CGA H + VT
Sbjct: 418 GILMTFGSG-TNGCLGHGQ---------TNDVQQAKIVEALLGFEVTLVSCGATHVMAVT 467

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            + E+FSWG    GRLG G     S PQ + I S   V+ V CG    C++  + D    
Sbjct: 468 NEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGV--DCSILLTTDNRLL 525

Query: 321 GDGTYNSGLLG------------HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           G G+     LG               ++  ++P   S  L    ++ ++ G  H+A +T 
Sbjct: 526 GCGSNRHNKLGLDILPADDSPSQQIDEMCVFVPAS-SAPLLTTRIAAVALGTSHSAAITE 584

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G  +TFG  +F  LG+        P+ V  L  +  + V CG   T A+          
Sbjct: 585 SGQCYTFGANNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAI---------- 634

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE---NICQVACGH 478
               T+ G+++TWG G +GRLG  ++  ++ P+ V PL+D     I  ++C H
Sbjct: 635 ----TTEGEVYTWGKGSRGRLGRREENTKI-PKPV-PLLDSEPFQIISISCSH 681


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 43/351 (12%)

Query: 263 GEIFSWGEESGGRLGHGREADVSH-----------PQLIEILSGVNVELVACGEYHTCAV 311
           G + S+G+   G+LGHG+   VS            P +I     +    +     H+ A+
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T  GD   WG+G  +   LGHGS    + PR +        +  ++CGL HT  +  +G 
Sbjct: 222 TAKGDAMAWGNG--DKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGE 279

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           LF +G+GS G LG GD  +   P    T   +R   + CG  H+               G
Sbjct: 280 LFAWGNGSNGRLGLGD--TNDRPESCSTSVPVRFRHIFCGASHSL--------------G 323

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID----ENICQVACGHDLSVALTTS 487
            +  G+ +TWG  ++G+ GHG    +   + +    D    E +   A G + ++  T S
Sbjct: 324 LSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLFSTAS 383

Query: 488 GHVYTMGSAAYG--QLGVPVADG-------LVPTRVDG-EIAESFVEEVACGAYHVAALT 537
           G VY+ G       + G+P   G       L PT +   E A   + +VACG  H  A++
Sbjct: 384 GRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVS 443

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           ++ KVYTWG G NG+LGHGD+++ ++PTLV  ++ + VK    G   T  +
Sbjct: 444 ASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTVFL 494



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 162/344 (47%), Gaps = 12/344 (3%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           + L+P  + +T  +    I   + H++ +T +G+  +WG     RLGHG       P++I
Sbjct: 193 NKLVPTMIAATRDILFRRIDSLSTHSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMI 252

Query: 291 EILS-GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           E L     V  +ACG  HT A+  SG+L+ WG+G+  +G LG G       P   S ++ 
Sbjct: 253 EHLRLKGRVRDLACGLGHTLALMESGELFAWGNGS--NGRLGLGDTND--RPESCSTSVP 308

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            +   +I CG  H+  ++  G  +T+G  + G  GHG        +E+E+          
Sbjct: 309 -VRFRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFE--DGEEAE 365

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID- 468
           C  +          S++S    S  CG   +   G    LGHGD + RL P  +  L D 
Sbjct: 366 CVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDA 425

Query: 469 -ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEV 526
            E I +VACG D S+A++ SG VYT GS   G+LG    +    PT V   +    V++ 
Sbjct: 426 REEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVR-TMEGRHVKDA 484

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             G  H   LT   ++++ G+G +G+LGHGD   R  PT +   
Sbjct: 485 KAGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 45/343 (13%)

Query: 174 AETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL 233
           A T  I    + S S+H  A     + GD   WG G         ++R+G+  S  T   
Sbjct: 201 AATRDILFRRIDSLSTHSIA---ITAKGDAMAWGNG--------DKYRLGHGSS--TKEY 247

Query: 234 LPKAVEST-MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            P+ +E   +   V ++ACG  H + + + GE+F+WG  S GRLG G   D   P+    
Sbjct: 248 TPRMIEHLRLKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCST 305

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
              V    + CG  H+  ++  G  YTWG    N G  GHG     W  +++    DG  
Sbjct: 306 SVPVRFRHIFCGASHSLGLSWDGRAYTWGKN--NQGQCGHGHTNDQWTIQEIESFEDGEE 363

Query: 353 ---LSYISCGLWHTAVVTSAGHLFTFGDGSFGA--------LGHGDHISTSIPREVETLR 401
              ++Y + G  HT   T++G +++ G G   +        LGHGD      P  +++L 
Sbjct: 364 AECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLE 423

Query: 402 GLR--TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
             R    +V+CG  H+ AV              ++ GK++TWG G  G+LGHGD+E    
Sbjct: 424 DAREEIVKVACGWDHSLAV--------------SASGKVYTWGSGTNGKLGHGDEESFDT 469

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           P  V  +   ++     G + +V LT    +++ G    G+LG
Sbjct: 470 PTLVRTMEGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSGRLG 512


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 140/281 (49%), Gaps = 23/281 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H V +     + SWG    G+LGHG   D   P  +    G ++  V CG  +T
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 76

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A ++SG D+Y+WG G +  G LGHG     +IP  +   L G+ +  ISCG  H   VT
Sbjct: 77  VARSKSGKDVYSWGWGDF--GRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVT 133

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
               + ++G    G LG G    + +P+++    G+R   V+ G  H+ A+         
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI--------- 184

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID-ENICQVACGHDLSVALTT 486
                T  G L+ WG G  G LG GD   RL PE V   ID + I  V+CG   ++++++
Sbjct: 185 -----TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISS 237

Query: 487 SGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEV 526
           SG +YT G + YGQLG     D LVP +V   +++  + +V
Sbjct: 238 SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQ-ALSDKLISQV 277



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 21/285 (7%)

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI 356
           +V L++ G  HT A+     + +WG G    G LGHG      +P K+S   DG  +  +
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSV 69

Query: 357 SCGLWHTAVVTSAGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           +CG  +T   + +G  ++++G G FG LGHGD     IP  +  L+GLR  ++SCG  H 
Sbjct: 70  TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            AV +                K+ +WG    G LG G  +    P+ +       I  VA
Sbjct: 130 LAVTMEN--------------KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVA 175

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            G + SVA+T  G +Y  G   YG LG+    D L+P +V+  I    +  V+CG  H  
Sbjct: 176 AGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTI 233

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
           +++S+  +YT G    GQLGHGD ++   P  V  L DK + +V+
Sbjct: 234 SISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 278



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 29/270 (10%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG-E 264
           WG G  +G LG G+           D LLP  + +    D+ ++ CGA + V  +K G +
Sbjct: 36  WGRG-EDGQLGHGD---------TDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 85

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  P  I  L G+ ++ ++CG+ H  AVT    + +W  G 
Sbjct: 86  VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSW--GR 143

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +GI +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 144 NQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLG 202

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     IP +V  + G +   VSCG  HT ++              +S G L+T G  
Sbjct: 203 LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISI--------------SSSGGLYTHGWS 247

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQV 474
             G+LGHGD E  L P  V  L D+ I QV
Sbjct: 248 KYGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 14/199 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV+ WG G   G LG G+          +D  +P  + +   L +  I+CG  H + VT 
Sbjct: 85  DVYSWGWG-DFGRLGHGD---------PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 134

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           + ++ SWG    G LG G   D   PQ I    G+ +++VA G  H+ A+T  GDLY WG
Sbjct: 135 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 194

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G      IP KV  N+DG  +  +SCG  HT  ++S+G L+T G   +G
Sbjct: 195 WGRY--GNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 250

Query: 382 ALGHGDHISTSIPREVETL 400
            LGHGD     +PR+V+ L
Sbjct: 251 QLGHGDFEDCLVPRKVQAL 269



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 109/238 (45%), Gaps = 16/238 (6%)

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
           H+  IS G  HT  + +   + ++G G  G LGHGD     +P ++    G     V+CG
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             +T A          S SG      +++WG GD GRLGHGD      P  +  L    I
Sbjct: 73  ADYTVA---------RSKSGK----DVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRI 119

Query: 472 CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGA 530
            Q++CG    +A+T    V + G    G+LG+    D  VP ++        ++ VA GA
Sbjct: 120 KQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGA 178

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            H  A+T    +Y WG G  G LG GD ++R  P  V+   DK V  V CG   T  I
Sbjct: 179 EHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIV-MVSCGWRHTISI 235


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 167/349 (47%), Gaps = 47/349 (13%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ +S P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGS--------KVSCWIPRKVSGNLDGIHLSYISCGL 360
              T +G +Y  G    N G LG G         ++  + P  +        +  +S G 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             +A +T  G LF +GD S G +G  +  +  IP EV    G   + +SCG +H+A V  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV-- 243

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVAC 476
                       T+ G+L+T+G+ + G+LG  +   +L     +P     I + + QVAC
Sbjct: 244 ------------TTDGELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPDKVIQVAC 288

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           G   +V LT    VY  G   +GQLG+   + +   P  +D  I +  +  ++CG  H A
Sbjct: 289 GGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIID-RIKDQKISHISCGENHTA 346

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
            +T    +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   D      I   +
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT 175

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + A+T  G L+ WGD +   G +G  +K +  IP +V+    G  +
Sbjct: 176 PSDIIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLKNKSNVCIPHEVT---VGKPI 230

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  + +  +  R  + + G+  +  +V+CG
Sbjct: 231 SWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACG 289

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+              ++ +G G  G+LG G     LF    P+ +  + 
Sbjct: 290 GGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIDRIK 331

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFVE 524
           D+ I  ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V+
Sbjct: 332 DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFT-VQ 390

Query: 525 EVACGAYHVAALTS 538
            +ACG  H+    +
Sbjct: 391 LIACGGCHMLVFAT 404



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 23/262 (8%)

Query: 166 NSNDRSSAAETFRISLSSVVSSSSHGS-AHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           +++DR +  +    + S ++   S G+         G +F+WG+          E ++G 
Sbjct: 161 DTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDN--------SEGQIG- 211

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
               +++  +P  V  T+   +  I+CG  H+  VT  GE++++GE   G+LG   +  +
Sbjct: 212 -LKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI 268

Query: 285 SH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           +H  PQ +  +    ++ VACG  HT  +T    +Y +G G +  G LG G+ +      
Sbjct: 269 NHRSPQRVLGIPDKVIQ-VACGGGHTVVLTEK-VVYAFGLGQF--GQLGLGTFLFETSEP 324

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG--DHISTSIPREVETL 400
           K+   +    +S+ISCG  HTA++T  G ++TFGDG  G LG G  +  +   P      
Sbjct: 325 KIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNF 384

Query: 401 RGLRTTRVSCGVWHTAAVVVAT 422
                  ++CG  H   +V AT
Sbjct: 385 LKFTVQLIACGGCH--MLVFAT 404



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 27/226 (11%)

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++V   G +FTFG   F         + +IP +    +      +SCG  HTA V     
Sbjct: 44  SLVPDTGAVFTFGKTKF---------AENIPSKF-WFKNDVPICLSCGDEHTAIV----- 88

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P C+  L  E +   ACG + ++ 
Sbjct: 89  ---------TGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLV 139

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES-FVEEVACGAYHVAALTSTSKV 542
            T +G VY  G    GQLG+   D        G    S  +++++ GA   AALT   K+
Sbjct: 140 STDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKL 199

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + WG  + GQ+G  +K N   P  V     K +  + CG   +A +
Sbjct: 200 FMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFV 243


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 122/217 (56%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+   G+LG G+  D  + PQ++E LSGV +  ++ 
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G+ H+ A++ SG++Y+WG   +    LGH        P  +   L+   + +++CG  HT
Sbjct: 97  GKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKD--FPSLIEA-LENQKVEFLACGGSHT 153

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T  G +FTFG G +G LGH    +   P  V  L G R T+V+CG  HT A V    
Sbjct: 154 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYV---- 209

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                    +  GK+F++G G++G+LG+G    +L P
Sbjct: 210 ---------SDLGKVFSFGSGEEGQLGNGGTHNQLIP 237



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 29/252 (11%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           GA H ++++  G+ F +               + H +   IL   N+  + CG+YH+ A+
Sbjct: 4   GAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKNIIQITCGDYHSLAL 51

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           ++ G+L+ WG   +  G LG G         ++  +L G+ L+ IS G  H+  ++ +G+
Sbjct: 52  SKGGELFAWGQNLH--GQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGN 109

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++++G   FG LG G       P  +E L   +   ++CG  HTA +             
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALL------------- 156

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS-GHV 490
            T  G +FT+G G  G+LGH   +  L P  V  L    + QVACG   ++A  +  G V
Sbjct: 157 -TKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKV 215

Query: 491 YTMGSAAYGQLG 502
           ++ GS   GQLG
Sbjct: 216 FSFGSGEEGQLG 227



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H
Sbjct: 41  ITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSH 100

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ V+              G +++WG  D G+LG G  + + FP  +  L ++ +  +
Sbjct: 101 SMALSVS--------------GNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFL 146

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT  G V+T G+  YGQLG     + L P  V  ++A + V +VACG  H 
Sbjct: 147 ACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVT-KLAGNRVTQVACGRQHT 205

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G  GQLG+G   N+  P  +    ++++K
Sbjct: 206 LAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELK 249



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+
Sbjct: 45  DYHSLALSKGGELFAWGQNL-HGQLG-----VGKIFDSTTA---PQIVEHLSGVPLAQIS 95

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++  G I+SWG    G+LG G   D   P LIE L    VE +ACG  HT  
Sbjct: 96  AGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTAL 155

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G ++T+G G Y  G LGH S  +   P  V+  L G  ++ ++CG  HT A V+  
Sbjct: 156 LTKDGLVFTFGAGKY--GQLGHNSTQNELRPCLVT-KLAGNRVTQVACGRQHTLAYVSDL 212

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G   +  IP
Sbjct: 213 GKVFSFGSGEEGQLGNGGTHNQLIP 237



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G    ++F    AP 
Sbjct: 40  QITCGDYHSLAL--------------SKGGELFAWGQNLHGQLGVG----KIFDSTTAPQ 81

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAE 520
           I E++      Q++ G   S+AL+ SG++Y+ G   +GQLG+    D   P+ ++  +  
Sbjct: 82  IVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA-LEN 140

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             VE +ACG  H A LT    V+T+G G  GQLGH    N   P LV  L   +V +V C
Sbjct: 141 QKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVAC 200

Query: 581 G 581
           G
Sbjct: 201 G 201



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 5/147 (3%)

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           DG      +  +  R   +C+  L ++NI Q+ CG   S+AL+  G ++  G   +GQLG
Sbjct: 14  DGKPFEYNYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 69

Query: 503 V-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
           V  + D     ++   ++   + +++ G  H  AL+ +  +Y+WG+   GQLG G  D++
Sbjct: 70  VGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDK 129

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + P+L++ L++++V+ + CG + TA++
Sbjct: 130 DFPSLIEALENQKVEFLACGGSHTALL 156


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 180/393 (45%), Gaps = 41/393 (10%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           +S VV+ ++ GS      + G V+ WG   ++G LG G           T +LLP  V +
Sbjct: 244 MSDVVAVAAAGSRTVALKADGTVWTWGIN-SSGELGDGT---------TTHSLLPIQVPN 293

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                V NIA G  H + V K G  +SWG  + G+LG G   +   P L+  L+G  V  
Sbjct: 294 LSG--VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTG--VRA 349

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
           ++ G  HT A+   G  + WG   YNS G LG+G+  +  IP +V+     +    I  G
Sbjct: 350 LSGGVVHTVALKWDGTAWGWG---YNSAGQLGNGTTTNSSIPVQVAALTQAVE---IDAG 403

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            +HT      G L+ +GD  +GALG G+  S+S+P +V  L G+R      G +++ A  
Sbjct: 404 GYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-LSGVR--WFGAGYYYSVAER 460

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
              + +            LF WG    G LG G    R  P  V   +   I + A G  
Sbjct: 461 KKVNMAQVH--------TLFAWGHNTNGELGDGTTTQRTSPTAV---VVSGIVKTAGGSA 509

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI--AESFVEEVACGAYHVAALT 537
            SVAL   G V+T G  AYGQLG    +G     V        S V +VA G  H  AL+
Sbjct: 510 HSVALGAGGAVWTWGYNAYGQLG----NGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALS 565

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           +   V  WG  A GQLG+G   N+ +P  V  L
Sbjct: 566 ADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL 598



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 162/351 (46%), Gaps = 47/351 (13%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +F+WG  + G LG G     + P  + ++SG+     A G  H+ A+   G ++TWG   
Sbjct: 471 LFAWGHNTNGELGDGTTTQRTSPTAV-VVSGI--VKTAGGSAHSVALGAGGAVWTWGYNA 527

Query: 325 YNSGLLGHGSKVSCW----IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           Y  G LG+G+         +P  +SG +D      ++ G+ HT  +++ G +  +G  ++
Sbjct: 528 Y--GQLGNGTTTQVVTPTQLP-GMSGVID------VAAGVNHTVALSADGTVAAWGYNAY 578

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG+G   +   P+ V  L G+  T +S G  HT A+               + G ++ 
Sbjct: 579 GQLGNGTTANQLTPQSVPELDGV--TAISAGSTHTVAL--------------KADGTVWA 622

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG G    R  P  V  L  EN+  +A GH  +VA+   G ++  G    GQ
Sbjct: 623 WGSNLYGQLGDGTFTHRSSPVQVPSL--ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQ 680

Query: 501 LGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG+    +  VP +V G         +A G YH  AL +  +V+TWG  ++GQLG     
Sbjct: 681 LGLGTTTNQSVPVQVSGL---GHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATII 737

Query: 560 NRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
            R SP LV  L +  V  +  G   TA++         D +V +  +NP G
Sbjct: 738 QRYSPVLVPGLTN--VIALAAGGYTTAVL-------KRDGTVWAFGYNPNG 779



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 161/371 (43%), Gaps = 44/371 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V + + GA H+V VT+ G +++WG  + G+LG G     + P  +  +S  +V  VA   
Sbjct: 197 VVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS--DVVAVAAAG 254

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             T A+   G ++TW  G  +SG LG G+     +P +V  NL G+  + I+ GLWHT  
Sbjct: 255 SRTVALKADGTVWTW--GINSSGELGDGTTTHSLLPIQVP-NLSGV--TNIAAGLWHTLA 309

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           V   G  +++G+ ++G LG G  ++   P  V  L G+R   +S GV HT A+       
Sbjct: 310 VKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRA--LSGGVVHTVAL------- 360

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G  + WG    G+LG+G       P  VA L      ++  G   ++A  
Sbjct: 361 -------KWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQA--VEIDAGGYHTLARR 411

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA------LTST 539
             G +Y  G   YG LG         + V  ++  S V     G Y+  A      +   
Sbjct: 412 QDGTLYAWGDNFYGALGT---GNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
             ++ WG   NG+LG G    R SPT V          VV G+  TA    H        
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAV----------VVSGIVKTAGGSAHSVALGAGG 518

Query: 600 SVCSSCHNPFG 610
           +V +  +N +G
Sbjct: 519 AVWTWGYNAYG 529



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 182/417 (43%), Gaps = 50/417 (11%)

Query: 162 AFPDNSN-DRSSAAETFRISLSSVVSS----SSHGSAHE-DFDSLGDVFIWGEGIANGFL 215
           A+  N+N +      T R S ++VV S    ++ GSAH     + G V+ WG   A G L
Sbjct: 473 AWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYN-AYGQL 531

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
           G G      +    T   LP          V ++A G  H V ++  G + +WG  + G+
Sbjct: 532 GNGT-----TTQVVTPTQLPGMS------GVIDVAAGVNHTVALSADGTVAAWGYNAYGQ 580

Query: 276 LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSK 335
           LG+G  A+   PQ +  L GV    ++ G  HT A+   G ++ WG   Y  G LG G+ 
Sbjct: 581 LGNGTTANQLTPQSVPELDGVTA--ISAGSTHTVALKADGTVWAWGSNLY--GQLGDGTF 636

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
                P +V  +L+  ++  I+ G +HT  V   G L+ +G G  G LG G   + S+P 
Sbjct: 637 THRSSPVQVP-SLE--NVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPV 693

Query: 396 EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE 455
           +V  L       ++ G +HT A++              + G+++TWG    G+LG     
Sbjct: 694 QVSGLG--HAVAIAAGGYHTVALL--------------ANGQVWTWGYNSSGQLGDATII 737

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD 515
            R  P  V  L   N+  +A G   +  L   G V+  G    GQLG    DG   +R  
Sbjct: 738 QRYSPVLVPGL--TNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLG----DGTTTSRSS 791

Query: 516 --GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
               +  S V +++ G  H+  L   + V   G  + GQLG G    R +P  V  L
Sbjct: 792 PTATLMNSVV-DLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNL 847



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 155/379 (40%), Gaps = 81/379 (21%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP-QLIEILSGVNVELVACG 304
           V  ++ G  H V +   G  + WG  S G+LG+G   + S P Q+  +   V ++    G
Sbjct: 347 VRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEID---AG 403

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK--VSG---------------- 346
            YHT A  + G LY WGD  Y  G LG G+  S  +P +  +SG                
Sbjct: 404 GYHTLARRQDGTLYAWGDNFY--GALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERK 461

Query: 347 --NLDGIHLSY-------------------------------ISCGLWHTAVVTSAGHLF 373
             N+  +H  +                                + G  H+  + + G ++
Sbjct: 462 KVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVW 521

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           T+G  ++G LG+G       P ++  + G+    V+ GV HT A+              +
Sbjct: 522 TWGYNAYGQLGNGTTTQVVTPTQLPGMSGV--IDVAAGVNHTVAL--------------S 565

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           + G +  WG    G+LG+G    +L P+ V  L  + +  ++ G   +VAL   G V+  
Sbjct: 566 ADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL--DGVTAISAGSTHTVALKADGTVWAW 623

Query: 494 GSAAYGQLGVPVADGLVPTRVDGEIAESF--VEEVACGAYHVAALTSTSKVYTWGKGANG 551
           GS  YGQLG    DG    R       S   V  +A G +H  A+     ++ WG G  G
Sbjct: 624 GSNLYGQLG----DGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQG 679

Query: 552 QLGHGDKDNRNSPTLVDFL 570
           QLG G   N++ P  V  L
Sbjct: 680 QLGLGTTTNQSVPVQVSGL 698



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 517 EIAESFVE---EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           E+  +FV+    V+ G YH   + S   ++ WG   +GQLG+G +  RN+PT V  L 
Sbjct: 138 EVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN 195



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYH 532
           H L V   + G ++  G+   GQLG    +G       PTRV G    + V   + GA H
Sbjct: 156 HTLEV--KSGGSLWAWGNNPSGQLG----NGQRTQRNAPTRVRGL---NQVVSASAGAEH 206

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
             A+T    V+TWG  A GQLG G    R  P  V  + D
Sbjct: 207 SVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD 246


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 169/368 (45%), Gaps = 31/368 (8%)

Query: 204 FIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG 263
             WG+  A+G LG G            D+ +P AV     + V  +A GA H + VT  G
Sbjct: 59  LAWGDN-ASGQLGDGS---------TADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAG 108

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
            I +WG+ S G+LG G  ++   P  + + +GV V  VA G  H+ A+T +G +  WG  
Sbjct: 109 TILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGAN 168

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNL-DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           T   G LG G+ +    P  V  NL  G+  + ++ G  H+  VTSAG +  +GD + G 
Sbjct: 169 TI--GQLGDGTTIDS--PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQ 224

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LG G  I +  P  V    G+  T V+ G  H+ AV              TS G +  WG
Sbjct: 225 LGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAV--------------TSAGAVLAWG 270

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
               G+LG G    R  P  V+      +  VA G   S+AL+++G V   GS + GQLG
Sbjct: 271 SNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLG 330

Query: 503 -VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
               AD   P  V    A + V  +A G  H  A+TS      WG  + GQLG G   +R
Sbjct: 331 DGTTADRSTPVTVSSP-AGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDR 389

Query: 562 NSPTLVDF 569
            +P  V  
Sbjct: 390 VTPVAVSL 397



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
            +WG+ + G+LG G  AD S P  + + +GV V  VA G  H  AVT +G +  WGD   
Sbjct: 59  LAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTILAWGD--N 116

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
           +SG LG G+  +   P  V G   G+ ++ ++ G  H+  +TSAG +  +G  + G LG 
Sbjct: 117 SSGQLGDGTTSNRHTPVAV-GLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQLGD 175

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
           G  I +  P +V    G+  T V+ G  H+ AV              TS G +  WGD  
Sbjct: 176 GTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAV--------------TSAGTVLAWGDNA 221

Query: 446 KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
            G+LG G   P   P  V+         VA G   S+A+T++G V   GS + GQLG   
Sbjct: 222 SGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLG--- 278

Query: 506 ADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
            DG    R    +A S      V  VA G     AL+S   V  WG  ++GQLG G   +
Sbjct: 279 -DGTTADR-STPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTAD 336

Query: 561 RNSPTLVDFLKDKQVKRVVC----GLNFTAIICLHKW 593
           R++P  V       V  +      GL  T++     W
Sbjct: 337 RSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAW 373



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 18/231 (7%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H++ VT  G + +WG+ + G+LG G       P ++ + SGV    VA G+ H+ AVT +
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSA 263

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G +  WG  + +SG LG G+      P  VS +  G  ++ ++ G+  +  ++SAG +  
Sbjct: 264 GAVLAWG--SNSSGQLGDGTTADRSTPVAVSLS-GGTTVTAVAAGIAFSLALSSAGAVLA 320

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G  S G LG G     S P  V +  G   T ++ G  H  AV              TS
Sbjct: 321 WGSNSSGQLGDGTTADRSTPVTVSSPAGTTVTAIAGGDAHGLAV--------------TS 366

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLIDENICQVACGHDLSVAL 484
            G    WG+   G+LG G    R+ P  V+ P+    +  +A G   SVA+
Sbjct: 367 VGAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL--LPKAVESTMALDVHNIACGARHA 256
           S G V  WG+  A+G LG      G +   +T  +  LP  V +T       +A G  H+
Sbjct: 210 SAGTVLAWGDN-ASGQLG-----EGTTIPSRTPVVVSLPSGVTATA------VAGGDLHS 257

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGD 316
           + VT  G + +WG  S G+LG G  AD S P  + +  G  V  VA G   + A++ +G 
Sbjct: 258 LAVTSAGAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGA 317

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           +  WG  + +SG LG G+      P  VS +  G  ++ I+ G  H   VTS G    +G
Sbjct: 318 VLAWG--SNSSGQLGDGTTADRSTPVTVS-SPAGTTVTAIAGGDAHGLAVTSVGAAIAWG 374

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRT-TRVSCGVWHTAAVVVATDSS 425
           + SFG LG G +     P  V    G  T T ++ G  H+ AV     SS
Sbjct: 375 NNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAVAAPPTSS 424


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 154/289 (53%), Gaps = 24/289 (8%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           +S G+ S G+LG  R+     P+ I+ L+ ++V+LV+CG+ H+ AV   G ++ WG G+ 
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSE 60

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
               +G   ++S ++P K+   L GI +  +SCG +H+  ++  GH+F++G  S G LG 
Sbjct: 61  GQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118

Query: 386 GDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           G +  S +IP++V++L G+   +V+ G  H+ A+ +               G  F WG  
Sbjct: 119 GKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT--------------GTSFGWGSN 164

Query: 445 DKGRL---GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
             G+L   G+  KE    P  +  L + ++  ++CG++ +  LT  G V+T G  + GQL
Sbjct: 165 RSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224

Query: 502 G-VPVADGLVPTRVDGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKG 548
              P +    P  ++G      V ++ C +YH +A + +T +V + G+G
Sbjct: 225 QPSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYTTGQVVSLGRG 271



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 13/224 (5%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG G + G LG GE +          + +P  +++   + +  ++CG  H++ ++
Sbjct: 50  GKVFPWGAG-SEGQLGIGEFK--------EISFMPTKIKALAGIKIIQVSCGHYHSLALS 100

Query: 261 KQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           + G +FSWG  S G+LG G+ +   + PQ ++ L G+ +  VA G  H+ A++ +G  + 
Sbjct: 101 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 160

Query: 320 WGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           WG        L G+  K   + P  + G L  + + YISCG  HTAV+T  G +FTFG  
Sbjct: 161 WGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 219

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           S G L          P+ +E + G R +++ C  +HT A V  T
Sbjct: 220 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTT 262



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 22/265 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEIL 293
           P+ +++   L V  ++CG  H+V V  +G++F WG  S G+LG G   ++S  P  I+ L
Sbjct: 22  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKAL 81

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +G+ +  V+CG YH+ A++  G +++WG  +     LG  S+ S  IP+KV  +L+GI L
Sbjct: 82  AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR-SQAIPQKVK-SLEGIPL 139

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHISTSI--PREVETLRGLRTTRVSC 410
           + ++ G  H+  ++  G  F +G    G L   G+ +   I  P  +  L+ L    +SC
Sbjct: 140 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 199

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
           G  HTA +              T  G++FT+G    G+L    +  +  P+ +   I   
Sbjct: 200 GYEHTAVL--------------TEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR 244

Query: 471 ICQVACGHDLSVA-LTTSGHVYTMG 494
           + Q+ C    ++A + T+G V ++G
Sbjct: 245 VSQIECASYHTIAYVYTTGQVVSLG 269



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 22/256 (8%)

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           Y+ GD ++  G LG     S   P  +   L+ +H+  +SCG  H+  V   G +F +G 
Sbjct: 1   YSCGDNSW--GQLGQRRDQSTERPEPIQA-LNDLHVDLVSCGKEHSVAVCHKGKVFPWGA 57

Query: 378 GSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           GS G LG G+    S +P +++ L G++  +VSCG +H+ A+              +  G
Sbjct: 58  GSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLAL--------------SEDG 103

Query: 437 KLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            +F+WG   +G+LG G +   +  P+ V  L    + QVA G   S AL+ +G  +  GS
Sbjct: 104 HVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGS 163

Query: 496 AAYGQL---GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
              GQL   G  V + +      G +    V  ++CG  H A LT   +V+T+G  ++GQ
Sbjct: 164 NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 223

Query: 553 LGHGDKDNRNSPTLVD 568
           L    +  +  P L++
Sbjct: 224 LQPSPRSGQRGPQLIE 239



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 21/222 (9%)

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           ++ GD S+G LG     ST  P  ++ L  L    VSCG  H+ AV              
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHK----------- 49

Query: 433 TSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
              GK+F WG G +G+LG G+ KE    P  +  L    I QV+CGH  S+AL+  GHV+
Sbjct: 50  ---GKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVF 106

Query: 492 TMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           + G  + GQLG+        +P +V   +    + +VA G  H  AL+ T   + WG   
Sbjct: 107 SWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNR 165

Query: 550 NGQL---GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +GQL   G+  K+    P  +  LK+  V  + CG   TA++
Sbjct: 166 SGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 207



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P ++ +   L V  I+CG  H  ++T++G++F++G  S G+L     +    PQLIE + 
Sbjct: 183 PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIG 242

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDG 323
           G  V  + C  YHT A V  +G + + G G
Sbjct: 243 G-RVSQIECASYHTIAYVYTTGQVVSLGRG 271


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H VLVT  G+++ +G  + G+LG    + +S P  ++ L    V   +CG  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G LY+ G  +   G LG G        +++S       +  +S G   +A +T 
Sbjct: 102 LLYTEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G LG       S P++++   G   + +SCG +H+A V          
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYYHSAFV---------- 207

Query: 429 PSGSTSCGKLFTWGDGDKGRLG-HGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T  G+L+T+G+ + G+LG   DK +    P+ V+ L  + +  V+CG + ++A+T 
Sbjct: 208 ----TQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTE 262

Query: 487 SGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQL  G  + +  +P  VD  + +  +  V CG  H A +T    +YT
Sbjct: 263 K-EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYT 320

Query: 545 WGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
           +G G +G+LG G+++  N+  P L  +FLK   V+ V CG
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLK-FTVQSVACG 359



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G   +    L  GS +S     K    L    + + SCG 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKA---LKSEKVVFASCGR 98

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T  G L++ G  S G LG GD                RT+      ++T   + 
Sbjct: 99  NHTLLYTEQGKLYSSGGNSEGQLGLGDTSG-------------RTSFQEISFFNTQYKIK 145

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  GKLF WGD  +G+LG   +     P+ +   I + I  ++CG+  
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYH 203

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAAL 536
           S  +T  G +YT G    G+LG+P +D L     P RV G   +  V+ V+CG  H  A+
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLP-SDKLKKHKKPQRVSGLSGK--VKIVSCGGEHTIAV 260

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T   +VYT+G G  GQLGHG        P  VD L  K +  V CG N TA+I
Sbjct: 261 TE-KEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 31/312 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++  +  V   +CG  H +L T+QG+++S G  S G+LG G  +  +  Q I    
Sbjct: 80  PTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFN 139

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   ++ ++ G   + A+T  G L+ WGD +   G LG   +     P+K+     G  +
Sbjct: 140 TQYKIKQLSAGSNTSAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKID---IGKPI 194

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIST-SIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT  G L+TFG+   G LG   D +     P+ V  L G +   VSCG
Sbjct: 195 SWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSG-KVKIVSCG 253

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDE 469
             HT AV                  +++T+G G  G+LGHG    E +L P+ V  L  +
Sbjct: 254 GEHTIAVTEK---------------EVYTFGLGQFGQLGHGTFIFETQL-PKAVDVLTKK 297

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEV 526
            I  V CG + +  +T  G +YT G   +G+LG+      +  VP      +  + V+ V
Sbjct: 298 TILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFT-VQSV 356

Query: 527 ACGAYHVAALTS 538
           ACG  H+    +
Sbjct: 357 ACGGCHMLVFAT 368



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVE 524
           L ++    ++CG + +V +T +G +Y  GS  +GQLG+     +  PT V    +E  V 
Sbjct: 34  LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVF 93

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK-QVKRVVCGLN 583
             +CG  H    T   K+Y+ G  + GQLG GD   R S   + F   + ++K++  G N
Sbjct: 94  -ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSN 152

Query: 584 FTAIICL 590
            +A + +
Sbjct: 153 TSAALTV 159



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)

Query: 178 RIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           R+S LS  V   S G  H    +  +V+ +G G   G LG G     + F  Q    LPK
Sbjct: 239 RVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLG-QFGQLGHGT----FIFETQ----LPK 289

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILS 294
           AV+      +  + CG  H  ++T +G ++++G+   G+LG G E   +   P L     
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFL 349

Query: 295 GVNVELVACGEYH 307
              V+ VACG  H
Sbjct: 350 KFTVQSVACGGCH 362


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 29/340 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+CG  H VLVT  G+++ +G  + G+LG    + +S P  ++ L    V   +CG  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G LY+ G  +   G LG G        +++S       +  +S G   +A +T 
Sbjct: 102 LLYTEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G LG       S P++++   G   + +SCG +H+A V          
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYYHSAFV---------- 207

Query: 429 PSGSTSCGKLFTWGDGDKGRLG-HGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T  G+L+T+G+ + G+LG   DK +    P+ V+ L  + +  V+CG + ++A+T 
Sbjct: 208 ----TQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTE 262

Query: 487 SGHVYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQL  G  + +  +P  VD  + +  +  V CG  H A +T    +YT
Sbjct: 263 K-EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYT 320

Query: 545 WGKGANGQLGHGDKD--NRNSPTLV-DFLKDKQVKRVVCG 581
           +G G +G+LG G+++  N+  P L  +FLK   V+ V CG
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLK-FTVQSVACG 359



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  VT +G LY +G   +    L  GS +S     K    L    + + SCG 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKA---LKSEKVVFASCGR 98

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T  G L++ G  S G LG GD                RT+      ++T   + 
Sbjct: 99  NHTLLYTEQGKLYSSGGNSEGQLGLGDTSG-------------RTSFQEISFFNTQYKIK 145

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
              + S++ +  T  GKLF WGD  +G+LG   +     P+ +   I + I  ++CG+  
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYH 203

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLV----PTRVDGEIAESFVEEVACGAYHVAAL 536
           S  +T  G +YT G    G+LG+P +D L     P RV G   +  V+ V+CG  H  A+
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLP-SDKLKKHKKPQRVSGLSGK--VKIVSCGGEHTIAV 260

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T   +VYT+G G  GQLGHG        P  VD L  K +  V CG N TA+I
Sbjct: 261 TE-KEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 31/312 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++  +  V   +CG  H +L T+QG+++S G  S G+LG G  +  +  Q I    
Sbjct: 80  PTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFN 139

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           +   ++ ++ G   + A+T  G L+ WGD +   G LG   +     P+K+     G  +
Sbjct: 140 TQYKIKQLSAGSNTSAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKID---IGKPI 194

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-HGDHIST-SIPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT  G L+TFG+   G LG   D +     P+ V  L G +   VSCG
Sbjct: 195 SWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSG-KVKIVSCG 253

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDE 469
             HT AV                  +++T+G G  G+LGHG    E +L P+ V  L  +
Sbjct: 254 GEHTIAVTEK---------------EVYTFGLGQFGQLGHGTFIFETQL-PKAVDVLTKK 297

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV---PVADGLVPTRVDGEIAESFVEEV 526
            I  V CG + +  +T  G +YT G   +G+LG+      +  VP      +  + V+ V
Sbjct: 298 TILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFT-VQSV 356

Query: 527 ACGAYHVAALTS 538
           ACG  H+    +
Sbjct: 357 ACGGCHMLVFAT 368



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVE 524
           L ++    ++CG + +V +T +G +Y  GS  +GQLG+     +  PT V    +E  V 
Sbjct: 34  LKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVF 93

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK-QVKRVVCGLN 583
             +CG  H    T   K+Y+ G  + GQLG GD   R S   + F   + ++K++  G N
Sbjct: 94  -ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSN 152

Query: 584 FTAIICL 590
            +A + +
Sbjct: 153 TSAALTV 159



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)

Query: 178 RIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           R+S LS  V   S G  H    +  +V+ +G G   G LG G     + F  Q    LPK
Sbjct: 239 RVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLG-QFGQLGHGT----FIFETQ----LPK 289

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH--PQLIEILS 294
           AV+      +  + CG  H  ++T +G ++++G+   G+LG G E   +   P L     
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFL 349

Query: 295 GVNVELVACGEYH 307
              V+ VACG  H
Sbjct: 350 KFTVQSVACGGCH 362


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVT---VGKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEK-VVY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 404


>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
          Length = 1660

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 104/193 (53%), Gaps = 9/193 (4%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI- 292
           LP        LDV+  A G +HA LVT  G ++ WGE  GG+LG G + D + P  I   
Sbjct: 231 LPGLAPGGGHLDVYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHG 290

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L G     VACG+  T A+T  G+L+ WG    +S            +P +V G+L G  
Sbjct: 291 LQGQCAVAVACGDDCTAALTDGGELFMWGRLHVDS--------RPQLVPLQVRGDLRGRK 342

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           +  +SCG +H A V+S G LFT+G+G  G LGHGD  + + P  V  L G +   V+CGV
Sbjct: 343 VVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVACGV 402

Query: 413 WHTAAVVVATDSS 425
           WH+AA+V   + S
Sbjct: 403 WHSAAIVSEPEGS 415



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 6/157 (3%)

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-PLIDENICQVACGHDLSVALTTSGHVY 491
           T+ G ++ WG+G  G+LG G  + +  P  +   L  +    VACG D + ALT  G ++
Sbjct: 257 TATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAALTDGGELF 316

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
                 +G+L V     LVP +V G++    V +V+CG +H AA++S  +++TWG+G  G
Sbjct: 317 M-----WGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGFGG 371

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +LGHGD+ NR  P+LV  L  +QV  V CG+  +A I
Sbjct: 372 KLGHGDQANRAHPSLVHALAGRQVLEVACGVWHSAAI 408



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 164/398 (41%), Gaps = 86/398 (21%)

Query: 1   MLIWYSGKEE-RQLKLNQVSRIIPGQRTATFQRYPRPEKEYQSFSLIY-----NDRSLDL 54
            L W S     +Q+KL  VS ++ GQ T  F+RYP  E    SFSL Y       R+LDL
Sbjct: 69  QLKWRSASGSVKQVKLRNVSEVVAGQATEVFRRYPLREG-AGSFSLRYRAEDGTSRTLDL 127

Query: 55  ICKDKDEAEVWLVGLKALITRGTHSKWKLGTINCSTSSDSPRARIRKTSP-TVTPFDFGD 113
              D+ + E+W  GL+ +  R       LGT         P A +  + P  ++P +   
Sbjct: 128 TATDEQQFELWFTGLRVVAAR----LQALGT---------PVAALPPSGPGGLSPAELAR 174

Query: 114 IQGTQ---------VPLDNVSNNGLGKAFADIISYTEAANTNSRADSVSFSPSPLTNAFP 164
             G +         VP+         +   D++++  A     RA  VS S   +     
Sbjct: 175 CVGIRMQEASGPVCVPVPE-------RTPCDLLAWGSA----QRAPPVSMSLRSVMGVVE 223

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSH--------GSAHEDF-DSLGDVFIWGEGIANGFL 215
           D    R         SL  +     H        G  H     + G V+ WGEG      
Sbjct: 224 DCWQHR---------SLPGLAPGGGHLDVYRAAVGRKHAALVTATGAVYCWGEGR----- 269

Query: 216 GGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGR 275
            GG+  +G+   +     +   ++   A+ V   ACG      +T  GE+F W     GR
Sbjct: 270 -GGKLGLGHDQDQAQPLRIRHGLQGQCAVAV---ACGDDCTAALTDGGELFMW-----GR 320

Query: 276 LGHGREADVSHPQLIEI-----LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLL 330
           L      D S PQL+ +     L G  V  V+CG +H  AV+  G L+TWG+G    G L
Sbjct: 321 L----HVD-SRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGF--GGKL 373

Query: 331 GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           GHG + +   P  V   L G  +  ++CG+WH+A + S
Sbjct: 374 GHGDQANRAHPSLVHA-LAGRQVLEVACGVWHSAAIVS 410



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
           ++V   A G  H   VT +G +Y WG+G    G LG G       P ++   L G     
Sbjct: 241 LDVYRAAVGRKHAALVTATGAVYCWGEG--RGGKLGLGHDQDQAQPLRIRHGLQGQCAVA 298

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-TLRGLRTTRVSCGVWH 414
           ++CG   TA +T  G LF +G        H D     +P +V   LRG +  +VSCG +H
Sbjct: 299 VACGDDCTAALTDGGELFMWGRL------HVDSRPQLVPLQVRGDLRGRKVVQVSCGPFH 352

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
            AAV              +S G+LFTWG+G  G+LGHGD+  R  P  V  L    + +V
Sbjct: 353 CAAV--------------SSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEV 398

Query: 475 ACG--HDLSVALTTSGHVY 491
           ACG  H  ++     G  Y
Sbjct: 399 ACGVWHSAAIVSEPEGSPY 417



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 37/191 (19%)

Query: 436 GKLFTWG--------------DGDKGRLGHGDKE---PRLFPECVAPLID-ENICQVACG 477
           G L+TWG              D +KG LGHGD +    +L P  V   ++   +  VA G
Sbjct: 487 GALYTWGAVSESVAFGASEKRDSNKGCLGHGDGDLYRGQLLPTRVGGALEARQVRHVAAG 546

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
             L+VA+TT G V+ MG  A G  G     P     +P  V G +   FV+E+ CG +H 
Sbjct: 547 SHLTVAVTTGGRVFQMG--ATGASGPARHCPWEGATLPELVRGALQGYFVDELCCGMHHA 604

Query: 534 AALT-------------STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
           AA               +    + WG+G+ GQLG    D+  +P LV+ LK + V +V C
Sbjct: 605 AATGRPLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVLQVAC 664

Query: 581 GLNFTAIICLH 591
           G + +  +C H
Sbjct: 665 GGSNSLAVCEH 675



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF-LKDKQVKRVVCG 581
           V   A G  H A +T+T  VY WG+G  G+LG G   ++  P  +   L+ +    V CG
Sbjct: 243 VYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACG 302

Query: 582 LNFTAII 588
            + TA +
Sbjct: 303 DDCTAAL 309


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 31/296 (10%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           +D + P A++         I CG  H + +T++G +F WG  S G LG+GR  D+  P  
Sbjct: 289 SDFIQPIALKQEFV----KIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQ 344

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNL 348
           I+I SG+    +A G YH+ A+ ++  +Y W  G  N G LG G+K +  +P++++  + 
Sbjct: 345 IDI-SGLFFNEIAAGAYHSLALAKNNQVYGW--GVNNRGQLGIGNKENQLLPKQLTFFDR 401

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             I   Y+ CG  H+A +T+   L+T+G+G +  LGHG  +    P+++E L+ +    V
Sbjct: 402 KKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDV 461

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPL 466
           + G  H+  +              T+ G ++ WG      LG   ++ +    P+ V  +
Sbjct: 462 ALGTIHSLCI--------------TNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLM 507

Query: 467 I----DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA---DGLVPTRVD 515
                D +  QVA G   S++L+ +GH+Y  GS     LGV +       VP +V+
Sbjct: 508 SQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVE 563



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 28/263 (10%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           + CG +HT A+T  G ++ WG G+   G LG+G       P ++  ++ G+  + I+ G 
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGS--QGCLGNGRVDDLETPTQI--DISGLFFNEIAAGA 359

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAV 418
           +H+  +     ++ +G  + G LG G+  +  +P+++     + ++   + CG  H+A +
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACI 419

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T+  +L+TWG+GD  RLGHG     + P+ +  L D  +  VA G 
Sbjct: 420 --------------TTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGT 465

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVA---DGLVPTRVDGEIAESFVE----EVACGAY 531
             S+ +T  G VY  GS+    LG+P     D  +P RV G +++SF +    +VA G  
Sbjct: 466 IHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRV-GLMSQSFRDASFYQVAAGTS 524

Query: 532 HVAALTSTSKVYTWGKGANGQLG 554
           H  +L+    +Y WG   N  LG
Sbjct: 525 HSLSLSENGHLYVWGSNKNSLLG 547



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 118/520 (22%), Positives = 187/520 (35%), Gaps = 115/520 (22%)

Query: 147 SRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIW 206
           SR   V  S   L  A P+NS+     A   +     +V    H  A       G VFIW
Sbjct: 269 SRTQQVQNSQYNLNQAEPNNSDFIQPIA--LKQEFVKIVCGHHHTMA---LTEEGAVFIW 323

Query: 207 GEG------------------------IANGFLGGGEHRVGYSFSRQT------------ 230
           G G                          N    G  H +  + + Q             
Sbjct: 324 GMGSQGCLGNGRVDDLETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLG 383

Query: 231 -----DALLPKAVE--STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
                + LLPK +       +    + CG +H+  +T   E+++WG     RLGHG   D
Sbjct: 384 IGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLD 443

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV--SCWIP 341
              P+ IEIL  V V  VA G  H+  +T  G +Y WG       +LG  ++      +P
Sbjct: 444 EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSS--KDSVLGMPTQQYKDQTLP 501

Query: 342 RKV---SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHISTSIPR 395
           ++V   S +        ++ G  H+  ++  GHL+ +G      LG    G    T +P+
Sbjct: 502 QRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQE-HTCVPQ 560

Query: 396 EVETLRGLRTTRVSCGVWHTAA----------VVVATDSSS-------SSPSGSTSC--- 435
           +VE    L  + +   ++               +V  + ++       S+   S  C   
Sbjct: 561 KVEQSEDLEKSCIEKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECKYK 620

Query: 436 ---------------GKLFTWGDGDKGRLGHG------------DKEPR--LFPECVAPL 466
                          G L+  G   KG L                K+P   LF +   P+
Sbjct: 621 FATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPI 680

Query: 467 -----IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIA 519
                 +  I  ++C ++  +A+T  G+ Y  GS  Y QLG+      V  P  ++G I 
Sbjct: 681 EIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIE 740

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           +  +     G    A LT   +V+++G    G LGH  K+
Sbjct: 741 QKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKN 780



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/433 (21%), Positives = 159/433 (36%), Gaps = 109/433 (25%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +++ WG         G  +R+G+      D + PK +E    + V ++A G  H++ +T 
Sbjct: 424 ELYTWG--------NGDYYRLGHGML--LDEMEPKKIEILQDVYVLDVALGTIHSLCITN 473

Query: 262 QGEIFSWGEESGGRLGHGREA--DVSHPQLIEILS----GVNVELVACGEYHTCAVTRSG 315
           +G +++WG      LG   +   D + PQ + ++S      +   VA G  H+ +++ +G
Sbjct: 474 EGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENG 533

Query: 316 DLYTWGDGTYNSGLLG---HGSKVSCWIPRKVSGNLD----------------------- 349
            LY WG     + LLG    G + +C +P+KV  + D                       
Sbjct: 534 HLYVWGSN--KNSLLGVRLQGQEHTC-VPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMK 590

Query: 350 -------------------------GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
                                         + + G  +T  + + GHL+  G    G L 
Sbjct: 591 DEKLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLC 650

Query: 385 HGDHISTSI-------------------PREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
              H                        P E+   R      +SC   H  AV       
Sbjct: 651 KNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAV------- 703

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVAC-GHDLSVA 483
                  T+ G  + WG     +LG G +   +F P  +   I++ +  +A  G   S  
Sbjct: 704 -------TAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSAL 756

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
           LT  G V++ G++ +G LG  + +  V    R+  +I       +AC    + A+    +
Sbjct: 757 LTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMI--NLACSNQTMFAIDQKQQ 814

Query: 542 VYTWGKGANGQLG 554
           ++ WG    GQLG
Sbjct: 815 LWAWGNNQFGQLG 827



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 6/134 (4%)

Query: 463 VAPL-IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAE 520
           + P+ + +   ++ CGH  ++ALT  G V+  G  + G LG    D L  PT++D  I+ 
Sbjct: 292 IQPIALKQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQID--ISG 349

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV--KRV 578
            F  E+A GAYH  AL   ++VY WG    GQLG G+K+N+  P  + F   K++  + +
Sbjct: 350 LFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYL 409

Query: 579 VCGLNFTAIICLHK 592
            CG   +A I  +K
Sbjct: 410 YCGDQHSACITTNK 423



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 156/386 (40%), Gaps = 103/386 (26%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G+ + WG    N  LG G  +  + F   T  LL  A+E  + +       G + + L+T
Sbjct: 707  GNAYCWGSNQYNQ-LGLG-FQSDHVF---TPILLEGAIEQKVIIMA---ITGEKFSALLT 758

Query: 261  KQGEIFSWGEESGGRLGHGRE--ADVSHPQLI-EILSGVNVELVACGEYHTCAVTRSGDL 317
             QGE++S+G    G LGH  +    +  P++I +I S +N+   AC      A+ +   L
Sbjct: 759  DQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMINL---ACSNQTMFAIDQKQQL 815

Query: 318  YTWGDGTYNSGLLG-----HGSKVSCWIPRKVS-------GNLDGI-----HLSY----- 355
            + WG+  +  G LG        +++    ++VS         L  +     ++ Y     
Sbjct: 816  WAWGNNQF--GQLGISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPERYIVYQPDKP 873

Query: 356  -------------ISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---------------- 386
                         +SCGL+HT ++T+   L T G   +   GH                 
Sbjct: 874  STRSITGEAFVDQVSCGLYHTCIITTNQELLTCGLAKYA--GHQSQEPEDPEQQQAQQAQ 931

Query: 387  --DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
              D  S+++    +  +      V+C  +HT AV V++D     P G             
Sbjct: 932  FIDAFSSTLEHSSKKFK-----LVACHEYHTVAVTVSSDLVFLGPEGKER---------- 976

Query: 445  DKGRLGHGDKEPRLFPE-CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
                 G  +K   LF +    P+  +NI  VACG + ++ L   G  YT G+   G+LG+
Sbjct: 977  -----GLHEKFANLFRDGKQMPVELQNIKFVACGPNHALILNDQGQTYTWGATMGGRLGL 1031

Query: 504  PVAD-GLV----------PTRVDGEI 518
             + + GL+          PT+++ E+
Sbjct: 1032 HINEIGLLDGQEKLIIPYPTKIECEV 1057



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 23/181 (12%)

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG---DKEPRLFPEC 462
            ++ CG  HT A+              T  G +F WG G +G LG+G   D E     + 
Sbjct: 302 VKIVCGHHHTMAL--------------TEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDI 347

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAES 521
                +E    +A G   S+AL  +  VY  G    GQLG+   +  L+P ++     + 
Sbjct: 348 SGLFFNE----IAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKK 403

Query: 522 F-VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
              + + CG  H A +T+  ++YTWG G   +LGHG   +   P  ++ L+D  V  V  
Sbjct: 404 IQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVAL 463

Query: 581 G 581
           G
Sbjct: 464 G 464



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 66/239 (27%)

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTTRVS 409
           + YISC   H   VT+ G+ + +G   +  LG G   DH+ T I  E             
Sbjct: 690 IRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLE------------- 736

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK------EPRLFPECV 463
            G      +++A      S +  T  G+++++G  + G LGH  K      EPR+  + +
Sbjct: 737 -GAIEQKVIIMAITGEKFS-ALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMIND-I 793

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA--DGLVPTRVDGEIA-- 519
             +I+     +AC +    A+     ++  G+  +GQLG+ +   +  +  + + +++  
Sbjct: 794 PSMIN-----LACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQVSSE 848

Query: 520 --------------------------------ESFVEEVACGAYHVAALTSTSKVYTWG 546
                                           E+FV++V+CG YH   +T+  ++ T G
Sbjct: 849 FLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTCG 907


>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
            [Oxytricha trifallax]
          Length = 2049

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 168/403 (41%), Gaps = 94/403 (23%)

Query: 232  ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
             L P+ + S     +  + CG  H +++   G++F WG    G+LG G  +    PQ++ 
Sbjct: 1621 VLYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNS----PQIL- 1675

Query: 292  ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
                      + G  H+ A+T+S +LY WG G    GL G G+      P K+    D  
Sbjct: 1676 ----------SAGYEHSIAITKSNELYIWGSG----GLCGIGTLKQQNAPVKI----DFF 1717

Query: 352  HLSYI---SCGLWHTAVVTSAGHLFTFGDGSFGAL------------GHGDHISTSIPRE 396
            + S I    CG  HT  VT     +++G    G L            G GD      P+ 
Sbjct: 1718 NKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQR 1777

Query: 397  VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG---- 452
            +  L GL+  +V+CG  H+ A+              T  G ++ WG  + G+LG G    
Sbjct: 1778 IPKLEGLQIAQVACGEAHSIAM--------------TKDGTIYGWGQSNYGQLGLGFSGD 1823

Query: 453  --------DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
                    +K     P+ +  L  E I ++ CG   ++  T  G +Y  G    GQLG+ 
Sbjct: 1824 SFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLD 1883

Query: 504  --------------------PVADGLVPTRV---DGEIAESFVEEVACGAYHVAALT--S 538
                                  +D ++PTRV    G IA   + ++ACG  H  A++   
Sbjct: 1884 TFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQG-IA---IHQIACGESHSLAVSGDG 1939

Query: 539  TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
             + ++ WG   NGQLG G+   + +P  V  L   Q++R+ CG
Sbjct: 1940 MNMLWAWGMFKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACG 1982



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 135/328 (41%), Gaps = 71/328 (21%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
             +++IWG G   G  G G         +Q +A  P  ++      +    CG  H V VT
Sbjct: 1689 NELYIWGSG---GLCGIGT-------LKQQNA--PVKIDFFNKSKILTAVCGGLHTVAVT 1736

Query: 261  KQGEIFSWGEESGGRLG------------HGREADVSHPQLIEILSGVNVELVACGEYHT 308
            K  E +SWG   GG+LG             G E  V  PQ I  L G+ +  VACGE H+
Sbjct: 1737 KDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHS 1796

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHG------------SKVSCWIPRKVSGNLDGIHLSYI 356
             A+T+ G +Y WG   Y  G LG G             K   + P++++G L    +S I
Sbjct: 1797 IAMTKDGTIYGWGQSNY--GQLGLGFSGDSFEPGLGMEKSKVYEPQEING-LKHEKISKI 1853

Query: 357  SCGLWHTAVVTSAGHLFTFGDGSFGALG-----------------HGDHISTS---IPRE 396
             CG   T   T  G L+  G    G LG                  G H  TS   +P  
Sbjct: 1854 ICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTR 1913

Query: 397  VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
            V   +G+   +++CG  H+ AV           SG      L+ WG    G+LG G+   
Sbjct: 1914 VICFQGIAIHQIACGESHSLAV-----------SGD-GMNMLWAWGMFKNGQLGLGEVTM 1961

Query: 457  RLFPECVAPLIDENICQVACGHDLSVAL 484
            +L P  V  L    I ++ACG   SVAL
Sbjct: 1962 KLNPRPVQSLCSSQIQRIACGSMHSVAL 1989



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 155/381 (40%), Gaps = 88/381 (23%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G VF+WG     G LG G++              P+            ++ G  H++ +T
Sbjct: 1652 GQVFVWGAN-QTGQLGLGDNS-------------PQI-----------LSAGYEHSIAIT 1686

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            K  E++ WG  SGG  G G     + P  I+  +   +    CG  HT AVT+  + Y+W
Sbjct: 1687 KSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSW 1744

Query: 321  GD------GTYNSGLL----GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
            G       G   S ++    G G +     P+++   L+G+ ++ ++CG  H+  +T  G
Sbjct: 1745 GLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIP-KLEGLQIAQVACGEAHSIAMTKDG 1803

Query: 371  HLFTFGDGSFGALG---HGDHISTSI---------PREVETLRGLRTTRVSCGVWHTAAV 418
             ++ +G  ++G LG    GD     +         P+E+  L+  + +++ CG   T   
Sbjct: 1804 TIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFT--- 1860

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG--------------------HGDKEPRL 458
            +  TD            G L+  G  D G+LG                    H      +
Sbjct: 1861 LFQTDK-----------GDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVI 1909

Query: 459  FPECVAPLIDENICQVACGHDLSVALTTSGH--VYTMGSAAYGQLGV-PVADGLVPTRVD 515
             P  V       I Q+ACG   S+A++  G   ++  G    GQLG+  V   L P  V 
Sbjct: 1910 LPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQ 1969

Query: 516  GEIAESFVEEVACGAYHVAAL 536
              +  S ++ +ACG+ H  AL
Sbjct: 1970 S-LCSSQIQRIACGSMHSVAL 1989



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 138/358 (38%), Gaps = 81/358 (22%)

Query: 243  ALDVHNIACGARHAVL------VTKQ---GEIFSWGEESGGRLG------------HGRE 281
            A D  N+  G+   +L      + KQ   G +FS G ++ G+LG            H   
Sbjct: 1559 AKDKRNLHLGSYSQILGKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPS 1618

Query: 282  ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
              V +P++I  L    +  V CG  HT  +  SG ++ WG     +G LG G        
Sbjct: 1619 IKVLYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQ--TGQLGLGDNSP---- 1672

Query: 342  RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
                          +S G  H+  +T +  L+ +G G  G  G G     + P +++   
Sbjct: 1673 ------------QILSAGYEHSIAITKSNELYIWGSG--GLCGIGTLKQQNAPVKIDFFN 1718

Query: 402  GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG----------- 450
              +     CG  HT AV              T   + ++WG  + G+LG           
Sbjct: 1719 KSKILTAVCGGLHTVAV--------------TKDWEAYSWGLTEGGQLGLPQSTIVKLCQ 1764

Query: 451  -HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-----P 504
              GD+   L P+ +  L    I QVACG   S+A+T  G +Y  G + YGQLG+      
Sbjct: 1765 GQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDS 1824

Query: 505  VADGL--------VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
               GL         P  ++G   E  + ++ CGA      T    +Y  G    GQLG
Sbjct: 1825 FEPGLGMEKSKVYEPQEINGLKHEK-ISKIICGATFTLFQTDKGDLYGCGVNDLGQLG 1881



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 118/300 (39%), Gaps = 70/300 (23%)

Query: 323  GTYNSGLLG------------HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
            GT N+G LG            H   +    PR +    D + +  + CG  HT V+  +G
Sbjct: 1594 GTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEV-IREVCCGNSHTMVINMSG 1652

Query: 371  HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
             +F +G    G LG GD+ S  I              +S G  H+ A+            
Sbjct: 1653 QVFVWGANQTGQLGLGDN-SPQI--------------LSAGYEHSIAI------------ 1685

Query: 431  GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
              T   +L+ WG G  G  G G  + +  P  +       I    CG   +VA+T     
Sbjct: 1686 --TKSNELYIWGSG--GLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEA 1741

Query: 491  YTMGSAAYGQLGVPVA-------------DGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
            Y+ G    GQLG+P +               L P R+  ++    + +VACG  H  A+T
Sbjct: 1742 YSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRI-PKLEGLQIAQVACGEAHSIAMT 1800

Query: 538  STSKVYTWGKGANGQLGHG------------DKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
                +Y WG+   GQLG G            +K     P  ++ LK +++ +++CG  FT
Sbjct: 1801 KDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFT 1860



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 37/229 (16%)

Query: 232  ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-------- 283
             L P+ +     L +  +ACG  H++ +TK G I+ WG+ + G+LG G   D        
Sbjct: 1772 VLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGM 1831

Query: 284  ----VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG-------- 331
                V  PQ I  L    +  + CG   T   T  GDLY  G G  + G LG        
Sbjct: 1832 EKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLY--GCGVNDLGQLGLDTFMEEM 1889

Query: 332  ------------HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
                        H       +P +V     GI +  I+CG  H+  V+  G    +  G 
Sbjct: 1890 QIASLEKVKKGKHNQTSDVILPTRVIC-FQGIAIHQIACGESHSLAVSGDGMNMLWAWGM 1948

Query: 380  F--GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            F  G LG G+      PR V++L   +  R++CG  H+ A++  T+  S
Sbjct: 1949 FKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALIGDTNQIS 1997



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 18/93 (19%)

Query: 488  GHVYTMGSAAYGQLGV-------------PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            G +++MG+   GQLG+             P    L P R+   + +  + EV CG  H  
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYP-RMIISLKDEVIREVCCGNSHTM 1646

Query: 535  ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             +  + +V+ WG    GQLG GD    NSP ++
Sbjct: 1647 VINMSGQVFVWGANQTGQLGLGD----NSPQIL 1675


>gi|428671737|gb|EKX72652.1| Regulator of chromosome condensation RCC1 domain containing protein
           [Babesia equi]
          Length = 1655

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 218/510 (42%), Gaps = 89/510 (17%)

Query: 179 ISLSSVVSSSSHGSAHEDFD-SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           I L + V+S S G+ H     S G ++ WG G A G LG G     ++ S+         
Sbjct: 162 IGLKNAVTSVSCGANHTLITTSNGSLYSWGIG-AFGVLGTGNINNNFTPSKV-------V 213

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
             S   + +     G+RH+V + + G ++SWG    GRLG G       P +I+I  G  
Sbjct: 214 FNSNAEVFITTCVAGSRHSVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYE 273

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           +  ++CG+ HT  + R G +YTWG     SG LG G  +S  +   +  +L G  ++ +S
Sbjct: 274 ISFISCGDSHTACIDRFGSVYTWGSA--KSGQLGLGKILSDVLEPTIVESLSGTPITQVS 331

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS---IPREVETLRGLRTTRVSCGVWH 414
           CG  +T  ++S+G ++ +G  S G     D +S++   IP+ ++ L G +   ++ G + 
Sbjct: 332 CGTGYTLALSSSGSIYQWG-YSIGLSQTHDGLSSNVSYIPQIIKEL-GSKNVYITSGPYS 389

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK----EPRLFPEC-------- 462
            A V               + G L TWG G   RLGHG+     +P+  PE         
Sbjct: 390 CAVV--------------NAFGDLLTWGIGQNFRLGHGNTNDYAKPKFVPELRNGVNIDM 435

Query: 463 -----------------VAPLIDE-NICQVACGHDLSVALTTSGHVYTMG---SAAYGQL 501
                               L DE  I Q++ G    V +T +G VYT G      Y   
Sbjct: 436 ISEESAKLEEEAEESTKKRNLYDERRIQQISVGDAHGVFVTCNGTVYTWGVNNGTGYNTS 495

Query: 502 GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
             P+ +   P  ++     S ++ +ACG+ H  A+T    +++WG   NGQLG GD  +R
Sbjct: 496 KDPLENYTEPCLLNS--FSSKIKRIACGSNHTLAVTVNGLLFSWGCNDNGQLGLGDLRSR 553

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVC--SSCHNPFGFRRKRHNCY 619
             P        + V  +   +N  A          VD+S C  SS H  F      ++ Y
Sbjct: 554 VFP--------EHVTSIENAINVYA---------GVDNSCCISSSSHEEF-----INDEY 591

Query: 620 NCGLVFCKACSSRKSLKAALAPSINKPYRV 649
               +F  +C  +  L    + S+  P  +
Sbjct: 592 GTMWMFGSSCGGKLGLGEGFSSSVMTPREI 621



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 168/373 (45%), Gaps = 57/373 (15%)

Query: 235 PKAVESTMALDVHNIACGARH-AVLVTKQ-------GEIFSWGEESGGRLGHGREADVSH 286
           P  V      +V  ++CG  H AVLV          G +F++G  + GRLG+  + D   
Sbjct: 79  PGVVPFFTGKNVVQVSCGDYHSAVLVVPNNRDHKSPGTVFTFGLGNNGRLGYYIDDDSER 138

Query: 287 ----------------PQLIEILSGVN--VELVACGEYHTCAVTRSGDLYTWGDGTYNSG 328
                           PQ + +  G+   V  V+CG  HT   T +G LY+WG G +  G
Sbjct: 139 RKEKSDTDEPSWCTPVPQPVGLSIGLKNAVTSVSCGANHTLITTSNGSLYSWGIGAF--G 196

Query: 329 LLGHGSKVSCWIPRKVSGNLDG-IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD 387
           +LG G+  + + P KV  N +  + ++    G  H+  +   G ++++G G  G LG G+
Sbjct: 197 VLGTGNINNNFTPSKVVFNSNAEVFITTCVAGSRHSVALDRDGRVWSWGYGGNGRLGLGN 256

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
             S   P  ++   G   + +SCG  HTA +                 G ++TWG    G
Sbjct: 257 TKSYYSPAMIKIFGGYEISFISCGDSHTACI--------------DRFGSVYTWGSAKSG 302

Query: 448 RLGHGDKEPRLFPECVAPLIDEN-----ICQVACGHDLSVALTTSGHVYTMG-SAAYGQL 501
           +LG G    ++  + + P I E+     I QV+CG   ++AL++SG +Y  G S    Q 
Sbjct: 303 QLGLG----KILSDVLEPTIVESLSGTPITQVSCGTGYTLALSSSGSIYQWGYSIGLSQT 358

Query: 502 --GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
             G+      +P ++  E+    V  +  G Y  A + +   + TWG G N +LGHG+ +
Sbjct: 359 HDGLSSNVSYIP-QIIKELGSKNVY-ITSGPYSCAVVNAFGDLLTWGIGQNFRLGHGNTN 416

Query: 560 NRNSPTLVDFLKD 572
           +   P  V  L++
Sbjct: 417 DYAKPKFVPELRN 429



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 182/422 (43%), Gaps = 72/422 (17%)

Query: 198 DSLGDVFIWGEGIANGFLGGG------------EHRVGYSF---SRQTDALLPKAVESTM 242
           ++ GD+  WG G  N  LG G            E R G +    S ++  L  +A EST 
Sbjct: 394 NAFGDLLTWGIG-QNFRLGHGNTNDYAKPKFVPELRNGVNIDMISEESAKLEEEAEESTK 452

Query: 243 ALDVHN------IACGARHAVLVTKQGEIFSWGEESGGRLGHGREA--DVSHPQLIEILS 294
             ++++      I+ G  H V VT  G +++WG  +G      ++   + + P L+   S
Sbjct: 453 KRNLYDERRIQQISVGDAHGVFVTCNGTVYTWGVNNGTGYNTSKDPLENYTEPCLLNSFS 512

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
              ++ +ACG  HT AVT +G L++WG    ++G LG G   S   P  V+   + I+  
Sbjct: 513 S-KIKRIACGSNHTLAVTVNGLLFSWGCN--DNGQLGLGDLRSRVFPEHVTSIENAIN-- 567

Query: 355 YISCGLWHTAVVTSAGH----------LFTFGDGSFGALGHGDHISTSI--PREVETLRG 402
            +  G+ ++  ++S+ H          ++ FG    G LG G+  S+S+  PRE+ ++ G
Sbjct: 568 -VYAGVDNSCCISSSSHEEFINDEYGTMWMFGSSCGGKLGLGEGFSSSVMTPREIRSISG 626

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
           +   +V+ G  HT A+              T  G L++ G G  GRLG G     L    
Sbjct: 627 I--LKVALGSIHTIAL--------------THDGLLYSCGAGTSGRLGTGSISNSLVFTL 670

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES- 521
           V    D     VA G   S+A++   ++Y  G   Y  L +   + LVPT +    + S 
Sbjct: 671 VQT--DVKFIDVAVGSSHSLAISLDNNLYGWGEGKY--LPIDGDEILVPTMISTLPSPSG 726

Query: 522 --FVEEVACGAYHVAALTSTSKVYTWGKGANGQLG------HGDKDNRNSPTLVDFLKDK 573
              V  V     H   L  +  +  WG    GQLG      H   D    P++V  L+D 
Sbjct: 727 VCKVSSVVASCNHTLVLARSGYIVAWGDNKFGQLGIKTASNHSATDFITVPSIV-LLEDS 785

Query: 574 QV 575
            V
Sbjct: 786 AV 787



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 147/311 (47%), Gaps = 45/311 (14%)

Query: 265 IFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVT--------RSG 315
           + SWG+ S   LG G     S  P ++   +G NV  V+CG+YH+  +           G
Sbjct: 56  VLSWGKISFNCLGQGVNVATSESPGVVPFFTGKNVVQVSCGDYHSAVLVVPNNRDHKSPG 115

Query: 316 DLYTWGDGTYNSGLLGH-------------GSKVSCW---IPRKVSGNLDGIH--LSYIS 357
            ++T+G G  N+G LG+              +    W   +P+ V  ++ G+   ++ +S
Sbjct: 116 TVFTFGLG--NNGRLGYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSI-GLKNAVTSVS 172

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
           CG  HT + TS G L+++G G+FG LG G+  +   P +V           +C      +
Sbjct: 173 CGANHTLITTSNGSLYSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITTCVAGSRHS 232

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           V +  D            G++++WG G  GRLG G+ +    P  +       I  ++CG
Sbjct: 233 VALDRD------------GRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISFISCG 280

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
              +  +   G VYT GSA  GQLG+   ++D L PT V+  ++ + + +V+CG  +  A
Sbjct: 281 DSHTACIDRFGSVYTWGSAKSGQLGLGKILSDVLEPTIVE-SLSGTPITQVSCGTGYTLA 339

Query: 536 LTSTSKVYTWG 546
           L+S+  +Y WG
Sbjct: 340 LSSSGSIYQWG 350



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 27/242 (11%)

Query: 368 SAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           S  ++ ++G  SF  LG G +++TS  P  V    G    +VSCG +H+A +VV  +   
Sbjct: 52  SYKNVLSWGKISFNCLGQGVNVATSESPGVVPFFTGKNVVQVSCGDYHSAVLVVPNNRDH 111

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGH---GDKEPRLF------PECVAPL---------ID 468
            SP      G +FT+G G+ GRLG+    D E R        P    P+         + 
Sbjct: 112 KSP------GTVFTFGLGNNGRLGYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSIGLK 165

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRV-DGEIAESFVEEV 526
             +  V+CG + ++  T++G +Y+ G  A+G LG   + +   P++V     AE F+   
Sbjct: 166 NAVTSVSCGANHTLITTSNGSLYSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITTC 225

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
             G+ H  AL    +V++WG G NG+LG G+  +  SP ++      ++  + CG + TA
Sbjct: 226 VAGSRHSVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISFISCGDSHTA 285

Query: 587 II 588
            I
Sbjct: 286 CI 287



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 148/364 (40%), Gaps = 73/364 (20%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSG-----------------------DLYTWGDGTYN 326
           IEI S V  E+VA G  H+  ++R                         ++ +WG  ++N
Sbjct: 7   IEIASRVP-EIVALGLNHSLCISRGSATHSLSKNKDYSSKFNNSTGSYKNVLSWGKISFN 65

Query: 327 SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT--------SAGHLFTFGDG 378
              LG G  V+      V     G ++  +SCG +H+AV+         S G +FTFG G
Sbjct: 66  C--LGQGVNVATSESPGVVPFFTGKNVVQVSCGDYHSAVLVVPNNRDHKSPGTVFTFGLG 123

Query: 379 SFGALGH--------------GDHIS--TSIPREVETLRGLR--TTRVSCGVWHTAAVVV 420
           + G LG+               D  S  T +P+ V    GL+   T VSCG  HT     
Sbjct: 124 NNGRLGYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSIGLKNAVTSVSCGANHTLI--- 180

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC--GH 478
                      +TS G L++WG G  G LG G+      P  V    +  +    C  G 
Sbjct: 181 -----------TTSNGSLYSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITTCVAGS 229

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             SVAL   G V++ G    G+LG+          +        +  ++CG  H A +  
Sbjct: 230 RHSVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISFISCGDSHTACIDR 289

Query: 539 TSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKW 593
              VYTWG   +GQLG G    +   PT+V+ L    + +V CG  +T  +     +++W
Sbjct: 290 FGSVYTWGSAKSGQLGLGKILSDVLEPTIVESLSGTPITQVSCGTGYTLALSSSGSIYQW 349

Query: 594 VSSV 597
             S+
Sbjct: 350 GYSI 353



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 155/346 (44%), Gaps = 55/346 (15%)

Query: 162 AFPDNSNDRSSAAETFR-ISLSSVVSSSSHGSAHEDF--DSLGDVFIWGEGIANGFLGGG 218
            FP++     +A   +  +  S  +SSSSH    E+F  D  G ++++G     G LG G
Sbjct: 554 VFPEHVTSIENAINVYAGVDNSCCISSSSH----EEFINDEYGTMWMFGSS-CGGKLGLG 608

Query: 219 EHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH 278
           E   G+S S  T    P+ + S     +  +A G+ H + +T  G ++S G  + GRLG 
Sbjct: 609 E---GFSSSVMT----PREIRSISG--ILKVALGSIHTIALTHDGLLYSCGAGTSGRLGT 659

Query: 279 GREADVSHPQLIEILSGVNVEL--VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV 336
           G  ++     L+  L   +V+   VA G  H+ A++   +LY WG+G Y   L   G ++
Sbjct: 660 GSISN----SLVFTLVQTDVKFIDVAVGSSHSLAISLDNNLYGWGEGKY---LPIDGDEI 712

Query: 337 SCWIPRKVSG--NLDGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG---HGDHIS 390
              +P  +S   +  G+  +S +     HT V+  +G++  +GD  FG LG     +H +
Sbjct: 713 --LVPTMISTLPSPSGVCKVSSVVASCNHTLVLARSGYIVAWGDNKFGQLGIKTASNHSA 770

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
           T              T  S  +   +AV +AT    S    S   G  F WG     RLG
Sbjct: 771 TDF-----------ITVPSIVLLEDSAVSIATSKYFSVCYNSK--GDAFAWGLASDDRLG 817

Query: 451 HGD-KEPRLF---PECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            GD KE  +F   P   + +I + I +     D++  L T+   YT
Sbjct: 818 IGDTKEKIVFDPSPIVTSAMIGDMIDKF----DMNPKLNTNLSRYT 859



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 151/341 (44%), Gaps = 49/341 (14%)

Query: 180 SLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           S SS +   + GS H    ++ G +F WG    NG LG G+ R     SR    + P+ V
Sbjct: 510 SFSSKIKRIACGSNHTLAVTVNGLLFSWGCN-DNGQLGLGDLR-----SR----VFPEHV 559

Query: 239 ESTM-ALDVHN-------IACGARHAVLVTKQGEIFSWGEESGGR--LGHGREADVSHPQ 288
            S   A++V+        I+  +    +  + G ++ +G   GG+  LG G  + V  P+
Sbjct: 560 TSIENAINVYAGVDNSCCISSSSHEEFINDEYGTMWMFGSSCGGKLGLGEGFSSSVMTPR 619

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            I  +SG  +  VA G  HT A+T  G LY+ G GT  SG LG GS  +  +   V  ++
Sbjct: 620 EIRSISG--ILKVALGSIHTIALTHDGLLYSCGAGT--SGRLGTGSISNSLVFTLVQTDV 675

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
             I    ++ G  H+  ++   +L+ +G+G +  +  GD I   +P  + TL        
Sbjct: 676 KFID---VAVGSSHSLAISLDNNLYGWGEGKYLPID-GDEI--LVPTMISTLPS------ 723

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG------HGDKEPRLFPEC 462
             GV   ++VV + + +          G +  WGD   G+LG      H   +    P  
Sbjct: 724 PSGVCKVSSVVASCNHTLVLARS----GYIVAWGDNKFGQLGIKTASNHSATDFITVPSI 779

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
           V  L++++   +A     SV   + G  +  G A+  +LG+
Sbjct: 780 V--LLEDSAVSIATSKYFSVCYNSKGDAFAWGLASDDRLGI 818


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 129/240 (53%), Gaps = 25/240 (10%)

Query: 230 TDAL-LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHP 287
           T AL LP+ +E+   + V  +ACG+RH V +TK+G++++WG+ S G+LG G++   +S P
Sbjct: 102 TQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSP 161

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           Q +  LSG+ +  V+ G  H+ A++ SG ++ WG    + G LG G       P  V  +
Sbjct: 162 QCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRN--DCGQLGLGDSQDRCTPTSVD-S 218

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L+    + ISCG  HTA++T  G +FTFG G FG LGH    +   PR V  L G + TR
Sbjct: 219 LNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTR 278

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE------PRLFPE 461
           ++CG +HT  +                  K++++G  D+ +LG  +        P L P+
Sbjct: 279 IACGRYHTLVL--------------QENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLPQ 324



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 28/271 (10%)

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           +E V CG+     ++  G +Y   D T            + ++PR +      I +S ++
Sbjct: 77  IEAVGCGDDEVILLSEKGSVYR-VDVTQ-----------ALYLPRMLEA-FCRIPVSQVA 123

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTA 416
           CG  HT  +T  G ++T+G  S G LG G    S S P+ V +L G+   +VS G  H+ 
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSF 183

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           A+ V+              G +F WG  D G+LG GD + R  P  V  L  +    ++C
Sbjct: 184 ALSVS--------------GSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISC 229

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
           G D +  LT  G V+T GS  +GQLG   +   +  R+  E+  + V  +ACG YH   L
Sbjct: 230 GKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVL 289

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
              +K+Y++G     QLG  +  + + P  V
Sbjct: 290 QENNKIYSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 17/198 (8%)

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
           +PR +E    +  ++V+CG  HT A+              T  G+++TWG   +G+LG G
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVAL--------------TKEGQVYTWGQNSRGQLGLG 152

Query: 453 DKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLV 510
            K   +  P+CV  L    + QV+ G D S AL+ SG V+  G    GQLG+    D   
Sbjct: 153 KKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCT 212

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           PT VD  +       ++CG  H A LT    V+T+G G  GQLGH    N   P LV  L
Sbjct: 213 PTSVDS-LNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAEL 271

Query: 571 KDKQVKRVVCGLNFTAII 588
              +V R+ CG   T ++
Sbjct: 272 WGAKVTRIACGRYHTLVL 289



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 15/220 (6%)

Query: 178 RISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           RI +S V   S H  A       G V+ WG+  + G LG G+   G S S       P+ 
Sbjct: 116 RIPVSQVACGSRHTVA---LTKEGQVYTWGQN-SRGQLGLGKK--GCSISS------PQC 163

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           V S   + +  ++ G  H+  ++  G +F WG    G+LG G   D   P  ++ L+   
Sbjct: 164 VRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKK 223

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
              ++CG+ HT  +T+ G ++T+G G +  G LGH S  +   PR V+  L G  ++ I+
Sbjct: 224 TTSISCGKDHTAILTKHGTVFTFGSGQF--GQLGHNSSRNELRPRLVA-ELWGAKVTRIA 280

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV 397
           CG +HT V+     +++FG      LG  +    S+P  V
Sbjct: 281 CGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 4/150 (2%)

Query: 445 DKGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
           +KG +   D    L+ P  +       + QVACG   +VALT  G VYT G  + GQLG+
Sbjct: 92  EKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGL 151

Query: 504 PVADGLV--PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
                 +  P  V        V+ V+ G  H  AL+ +  V+ WG+   GQLG GD  +R
Sbjct: 152 GKKGCSISSPQCVRSLSGMPLVQ-VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDR 210

Query: 562 NSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            +PT VD L  K+   + CG + TAI+  H
Sbjct: 211 CTPTSVDSLNLKKTTSISCGKDHTAILTKH 240



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 18/116 (15%)

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           DG+ G    G ++   F +C      E I  V CG D  + L+  G VY           
Sbjct: 57  DGENGARMRGKQK---FVKC-----KEKIEAVGCGDDEVILLSEKGSVYR---------- 98

Query: 503 VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           V V   L   R+        V +VACG+ H  ALT   +VYTWG+ + GQLG G K
Sbjct: 99  VDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKK 154


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 36/342 (10%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGV 296
           V++     V ++  G+R+++ +   G++F+WG    G LGH  E    + P  ++ L+ V
Sbjct: 32  VKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANV 91

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNS--------GLLGHGSKVSCWIPRKVSGNL 348
           N+   A G +H  AV   G  Y WG   Y             G   +    IP++ +  L
Sbjct: 92  NIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL 151

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
               +  ++ G  H+ V+T  GH++++G         GD    S+P  V+ L   R   +
Sbjct: 152 ---VVRQVAAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLE--RVRLI 202

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
           + G +H  A+                 G L+ WG+ + G+LG GD +PR  P  V  L  
Sbjct: 203 AVGAFHNLAL--------------QEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSG 248

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD---GLVPTRVDGEIAESFVEE 525
             +  +A G   S ALT  G VY  G   +G+LG    D    +VP RV+  + E  V +
Sbjct: 249 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV-Q 307

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           V+CG  H  ALT   ++YT+G+G +G+LG+G K     P  V
Sbjct: 308 VSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEV 349



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 93/218 (42%), Gaps = 45/218 (20%)

Query: 370 GHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G LFT+G    G LGH     T +IP +V+ L  +   + + G WH  AV          
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAV---------- 106

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPR-------------LFPE-CVAPLIDENICQV 474
                  G+ + WG  + G+ G   +EP              + P+ C + L+   + QV
Sbjct: 107 ----DDQGRAYAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCASKLV---VRQV 156

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYH 532
           A G   SV LT  GHV++     +GQ   P  +    VP RV G      V  +A GA+H
Sbjct: 157 AAGGTHSVVLTREGHVWS-----WGQPWPPGDIKQISVPVRVQGL---ERVRLIAVGAFH 208

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
             AL     ++ WG    GQLG GD   R+ P  V  L
Sbjct: 209 NLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGL 246



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 26/148 (17%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKA 237
           ++L  + +   H +A  D    G+V+ WG G         EH R+G+  + ++  ++P+ 
Sbjct: 249 LTLVDIAAGGWHSTALTDD---GEVYGWGRG---------EHGRLGFGDNDKSSKMVPQR 296

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ--LIEILSG 295
           V   +  D+  ++CG  H+V +T+ G ++++G    GRLG+GR+     P    I+I   
Sbjct: 297 VNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPP 356

Query: 296 VNV-----------ELVACGEYHTCAVT 312
            N+           +LVA G  HT A+ 
Sbjct: 357 KNLTDSGDAGRWIAKLVASGGRHTLAIV 384


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 161/338 (47%), Gaps = 39/338 (11%)

Query: 229  QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS--- 285
            + DAL P A           IA G  HA+ +   G ++SWG  S G+LG G     S   
Sbjct: 1028 KVDALPPAA----------KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKN 1077

Query: 286  HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
             PQ I  +S  NV  +ACG  H+ AV R G L++WG   Y  G LG G   S   P+KV+
Sbjct: 1078 RPQKINAIS--NVAAIACGGSHSLAVARDGSLWSWGYNYY--GQLGLGDNYSKTTPQKVN 1133

Query: 346  GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
                  +++ I+ G +++  +T  G ++++GD S G LG GD+   + P++VE L     
Sbjct: 1134 AI---SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS---- 1186

Query: 406  TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
                    + AA+    D S +     T  G +++WG   +G+LG  D + R  P+ V  
Sbjct: 1187 --------NVAAIAAGEDHSLA----LTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTT 1234

Query: 466  LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEI-AESFVE 524
            +   NI  +A G+  S A++  G  +  G    GQLG+  +  L       ++   S V 
Sbjct: 1235 I--SNIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVV 1292

Query: 525  EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
             ++ G YH  ALT    ++ WG   +GQ+G    D +N
Sbjct: 1293 GLSGGNYHSLALTEDGALWAWGDNDDGQIGSTGGDRKN 1330



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 35/312 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS---HPQLIEILSGVNVELVACGE 305
           IA G  HA+ +   G ++SWG  S G+LG G     S    PQ I  +S  NV  +ACG 
Sbjct: 549 IAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS--NVAAIACGG 606

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+ R G  ++WG   Y  G LG G  VS   PRKV+      ++  ++ G  H+  
Sbjct: 607 SHSLALARDGSFWSWGYNYY--GQLGLGDNVSKTTPRKVNAL---SNVVAMAAGDRHSLA 661

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T  G L+++GD ++G LG GD+   + PR+V  +       ++ G  H+ A+       
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS--NVVAIAAGYRHSLAL------- 712

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G +++WG+  +G+LG GD + R  P+ V  +   NI  +A G++ S+A++
Sbjct: 713 -------TRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTI--SNIKAIAVGNNYSIAIS 763

Query: 486 TSGHVYTMGSAAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
             G V+  G    GQLG+     +AD   P +V   I  S V  ++ G+ H  ALT    
Sbjct: 764 EEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV---IVISNVVGLSAGSSHSIALTEDGA 820

Query: 542 VYTWGKGANGQL 553
           ++ WG    GQ+
Sbjct: 821 LWAWGNNEAGQI 832



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 160/334 (47%), Gaps = 39/334 (11%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS--HPQLIEILSGVNVELVACGEY 306
            +A G   ++ +   G ++SWG+   G+LG G    V+   P  ++ L       +A G+ 
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP--PAAKIAAGDN 1043

Query: 307  HTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWI---PRKVSGNLDGIHLSYISCGLWH 362
            H  A+   G +++WG   YNS G LG GS  +      P+K++      +++ I+CG  H
Sbjct: 1044 HALALAPDGSVWSWG---YNSDGQLGLGSSGTYSTKNRPQKINAI---SNVAAIACGGSH 1097

Query: 363  TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
            +  V   G L+++G   +G LG GD+ S + P++V  +       ++ G +++ A+    
Sbjct: 1098 SLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS--NVAAIAAGEYYSLAL---- 1151

Query: 423  DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      T  G +++WGD   G+LG GD E R  P+ V  L   N+  +A G D S+
Sbjct: 1152 ----------TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVL--SNVAAIAAGEDHSL 1199

Query: 483  ALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            ALT  G V++ G  + GQLG+   D    P  V      S ++ +A G  H  A++    
Sbjct: 1200 ALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPV---TTISNIKAIAAGNSHSFAISEEGL 1256

Query: 542  VYTWGKGANGQLGHGDKD---NRNSPTLVDFLKD 572
             + WG   +GQLG G      N N+P  V  + +
Sbjct: 1257 AWAWGYNYDGQLGIGTSGSLANENTPQKVKVISN 1290



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 32/293 (10%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IACG  H++ + + G  +SWG    G+LG G     + P+ +  LS  NV  +A G
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAG 655

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
           + H+ A+T  G L++WGD TY  G LG G       PRKV+      ++  I+ G  H+ 
Sbjct: 656 DRHSLALTLDGSLWSWGDNTY--GQLGLGDNDHRNTPRKVNAI---SNVVAIAAGYRHSL 710

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            +T  G ++++G+ + G LG GD+   + P+ V T+  ++   V     +  ++ ++ + 
Sbjct: 711 ALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVG----NNYSIAISEE- 765

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLG---HGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                      G ++ WG    G+LG   HG       P+ V  ++  N+  ++ G   S
Sbjct: 766 -----------GLVWAWGYNCSGQLGIGTHGSLADENTPQKV--IVISNVVGLSAGSSHS 812

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVA----DGLVPTRVDGEIAESFVEEVACGA 530
           +ALT  G ++  G+   GQ+    A    D  V     GE+   + +  A GA
Sbjct: 813 IALTEDGALWAWGNNEAGQIAAEEAIEYIDNPVQVFQSGEVFHLYFDVDADGA 865



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 141/320 (44%), Gaps = 41/320 (12%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H++ +   G ++ WG     +LG G + +   P+   ++S  N+  VA G   + A+   
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASD 135

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G L+ WG   Y  G LG G   +   P K  G  D   ++ I+ G +H    T +G ++ 
Sbjct: 136 GSLWAWGGNYY--GQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYHALAATQSGEVWA 190

Query: 375 FGDGSFGALGH-GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
            G    G LG  GDH     P +V  L  +++  V+ G + + A+               
Sbjct: 191 MGRNDHGQLGFTGDH--ADAPVQVAGLSNVKS--VAAGEFFSLAL--------------K 232

Query: 434 SCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           + G ++ WG+ +  +LG G   E    P  +A L   NI  +A G   ++AL   G V+ 
Sbjct: 233 NDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVL--SNITAIAAGRRHAMALAEDGSVWA 290

Query: 493 MGSAAYGQLG-----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            G+   GQLG      P A G V +  D       V  +A G +H  ALTS   ++ WG 
Sbjct: 291 WGANGSGQLGFGDFETPKAPGRVSSLAD-------VTAIASGWFHSLALTSDGVLWAWGN 343

Query: 548 GANGQLGHGDKDNRNSPTLV 567
             +G+LG     +++ P  V
Sbjct: 344 NGDGRLGTDATSDQSLPAQV 363



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 28/285 (9%)

Query: 300  LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH-LSYISC 358
            +VA G   + A+   G L++WGD       LG G  V+ + P KV    D +   + I+ 
Sbjct: 985  MVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKV----DALPPAAKIAA 1040

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAA 417
            G  H   +   G ++++G  S G LG G   + S     + +  +     ++CG  H+ A
Sbjct: 1041 GDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLA 1100

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            V  A D            G L++WG    G+LG GD   +  P+ V  +   N+  +A G
Sbjct: 1101 V--ARD------------GSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI--SNVAAIAAG 1144

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
               S+ALT  G V++ G  + GQLG+    D   P +V+     S V  +A G  H  AL
Sbjct: 1145 EYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE---VLSNVAAIAAGEDHSLAL 1201

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            T    V++WG+ + GQLG  D D+RN+P  V  + +  +K +  G
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN--IKAIAAG 1244



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 33/326 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVELVACGEY 306
           +A G   ++ +   G ++SWG    G+LG G     DV  P  ++ L       +A G  
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGG 554

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAV 365
           H  A+   G +++WG  +     LG G   S    P+K++      +++ I+CG  H+  
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI---SNVAAIACGGSHSLA 611

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   G  +++G   +G LG GD++S + PR+V  L       ++ G  H+ A+ +     
Sbjct: 612 LARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAGDRHSLALTLD---- 665

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G L++WGD   G+LG GD + R  P  V  +   N+  +A G+  S+ALT
Sbjct: 666 ----------GSLWSWGDNTYGQLGLGDNDHRNTPRKVNAI--SNVVAIAAGYRHSLALT 713

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G V++ G+   GQLG+   D    P  V      S ++ +A G  +  A++    V+ 
Sbjct: 714 RDGSVWSWGNNTRGQLGLGDNDDRNTPQPV---TTISNIKAIAVGNNYSIAISEEGLVWA 770

Query: 545 WGKGANGQLG---HGDKDNRNSPTLV 567
           WG   +GQLG   HG   + N+P  V
Sbjct: 771 WGYNCSGQLGIGTHGSLADENTPQKV 796



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 124/274 (45%), Gaps = 36/274 (13%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH-GREADVSHPQLIEILSGVNVELVAC 303
           DV  IA G  HA+  T+ GE+++ G    G+LG  G  AD   P  +  LS  NV+ VA 
Sbjct: 168 DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA--PVQVAGLS--NVKSVAA 223

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLG---HGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           GE+ + A+   G ++ WG+    S  LG    G  V+   P  V  N     ++ I+ G 
Sbjct: 224 GEFFSLALKNDGTVWAWGNNE--SAQLGTGIAGEAVATPAPIAVLSN-----ITAIAAGR 276

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H   +   G ++ +G    G LG GD  +   P  V +L     T ++ G +H+ A+  
Sbjct: 277 RHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLA--DVTAIASGWFHSLAL-- 332

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       TS G L+ WG+   GRLG      +  P  V+ +   N    A G   
Sbjct: 333 ------------TSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSI--SNAVSFAGGQRH 378

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRV 514
           S+A+   G V++ G  AYGQLGV   + L P  V
Sbjct: 379 SLAIAADGSVWSWGGNAYGQLGV---ESLTPASV 409



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 136/292 (46%), Gaps = 28/292 (9%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY-ISC 358
           +VA G   + A+   G +++WG+       LG G     + P     N+D + L+  I+ 
Sbjct: 496 MVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPT----NVDALPLAASIAA 551

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAA 417
           G  H   + S G ++++G  S G LG G   + S     + +  +     ++CG  H+ A
Sbjct: 552 GGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLA 611

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           +  A D            G  ++WG    G+LG GD   +  P  V  L   N+  +A G
Sbjct: 612 L--ARD------------GSFWSWGYNYYGQLGLGDNVSKTTPRKVNAL--SNVVAMAAG 655

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAAL 536
              S+ALT  G +++ G   YGQLG+   D    P +V+   A S V  +A G  H  AL
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVN---AISNVVAIAAGYRHSLAL 712

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           T    V++WG    GQLG GD D+RN+P  V  + +  +K +  G N++  I
Sbjct: 713 TRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAI 762



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 32/236 (13%)

Query: 218  GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
            G+  +G ++S+ T    P+ V +    +V  IA G  +++ +T+ G ++SWG+ S G+LG
Sbjct: 1116 GQLGLGDNYSKTT----PQKVNAIS--NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLG 1169

Query: 278  HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS 337
             G   D + PQ +E+LS  NV  +A GE H+ A+TR G +++WG  +   G LG      
Sbjct: 1170 LGDNEDRNTPQKVEVLS--NVAAIAAGEDHSLALTRDGSVWSWGRNS--RGQLGLDDNDD 1225

Query: 338  CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGSFGALGHGDHISTSIP 394
               P+ V+      ++  I+ G  H+  ++  G  + +G   DG  G    G   + + P
Sbjct: 1226 RNTPQPVTTI---SNIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTP 1282

Query: 395  REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            ++V+ +       +S G +H+ A+              T  G L+ WGD D G++G
Sbjct: 1283 QKVKVIS--NVVGLSGGNYHSLAL--------------TEDGALWAWGDNDDGQIG 1322



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 164/359 (45%), Gaps = 49/359 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V++WG    N      +  +G   +R    L P+  ++ +  ++ ++A G   ++ + 
Sbjct: 86  GTVWVWGRNDYN------QLGLGDDINR----LAPE--QAPVVSNIVSVAAGRLFSLALA 133

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +++WG    G+LG G   +   P     LS  +V  +A G+YH  A T+SG++  W
Sbjct: 134 SDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEV--W 189

Query: 321 GDGTYNSGLLGH-GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
             G  + G LG  G       P +V+G     ++  ++ G + +  + + G ++ +G+  
Sbjct: 190 AMGRNDHGQLGFTGDHADA--PVQVAGL---SNVKSVAAGEFFSLALKNDGTVWAWGNNE 244

Query: 380 FGALG---HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
              LG    G+ ++T  P  V +      T ++ G  H  A+ +A D            G
Sbjct: 245 SAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRH--AMALAED------------G 286

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
            ++ WG    G+LG GD E    P  V+ L D  +  +A G   S+ALT+ G ++  G+ 
Sbjct: 287 SVWAWGANGSGQLGFGDFETPKAPGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNN 344

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
             G+LG    +D  +P +V    + S     A G  H  A+ +   V++WG  A GQLG
Sbjct: 345 GDGRLGTDATSDQSLPAQVS---SISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 118/277 (42%), Gaps = 33/277 (11%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRK---VSGNLDGIHLSYI 356
           +VA    H+ A+   G ++ WG   YN   LG G  ++   P +   VS      ++  +
Sbjct: 71  MVASRLDHSLALKGDGTVWVWGRNDYNQ--LGLGDDINRLAPEQAPVVS------NIVSV 122

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           + G   +  + S G L+ +G   +G LG GD+ +   P +   L       ++ G +H  
Sbjct: 123 AAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHAL 180

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH-GDKEPRLFPECVAPLIDENICQVA 475
           A              +T  G+++  G  D G+LG  GD      P  VA L   N+  VA
Sbjct: 181 A--------------ATQSGEVWAMGRNDHGQLGFTGDHADA--PVQVAGL--SNVKSVA 222

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
            G   S+AL   G V+  G+    QLG  +A   V T     +  S +  +A G  H  A
Sbjct: 223 AGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVL-SNITAIAAGRRHAMA 281

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           L     V+ WG   +GQLG GD +   +P  V  L D
Sbjct: 282 LAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLAD 318



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 133/315 (42%), Gaps = 32/315 (10%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IA G RHA+ + + G +++WG    G+LG G       P  +  L+  +V  +A G +H+
Sbjct: 272 IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLA--DVTAIASGWFHS 329

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+T  G L+ WG+     G LG  +     +P +VS   + +     + G  H+  + +
Sbjct: 330 LALTSDGVLWAWGNN--GDGRLGTDATSDQSLPAQVSSISNAVSF---AGGQRHSLAIAA 384

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV--------SCGVWHTAAVVV 420
            G ++++G  ++G LG       S+   V TL       +        +  +W       
Sbjct: 385 DGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDDGD 444

Query: 421 A-TDSSSSSPSGSTSCGKLFTWGDGD----KGRLGHGDKEPRLFPECVAPLIDENICQVA 475
              D S + P  S   G+    GDG      G  G   K    F  C  P        VA
Sbjct: 445 GFLDESDNCPCVSNP-GQEDEDGDGTGDFCDGCPGDFFKIQPGFSGCGNP-----NPMVA 498

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVA---DGLVPTRVDGEIAESFVEEVACGAYH 532
            G   S+AL T G V++ G+   GQLG+ +    D   PT VD   A      +A G  H
Sbjct: 499 AGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVD---ALPLAASIAAGGGH 555

Query: 533 VAALTSTSKVYTWGK 547
             AL S   V++WG+
Sbjct: 556 ALALASDGSVWSWGR 570


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 158/367 (43%), Gaps = 24/367 (6%)

Query: 215 LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARH--AVLVTKQGEIFSWGEES 272
           LG GEHR G    R        A+  T+A  +      A+H  A        I +WGE  
Sbjct: 8   LGVGEHRAG----RVALGWFILALAVTLAQSIGASPGWAQHRSAATAVVSDTILAWGEND 63

Query: 273 GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
           GG+LG+G   D S P  + + +G  V  VA G+ H  A+T +G +  WG      G LG+
Sbjct: 64  GGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNI--EGQLGN 121

Query: 333 GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS 392
           GS  S   P  VS    G     ++ G  H+  +TSAG +  +GD +FG LG G     S
Sbjct: 122 GSTTSSSTPVAVS-LPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRS 180

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            P  V    G     ++ G  H   +      +S+ P+       L TWG   +G+LG G
Sbjct: 181 TPVAVSLPAGTTVAAIAAGRDHNLVL------TSTGPT-------LLTWGKNTRGQLGDG 227

Query: 453 DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVP 511
               R  P  V       +  VA G D S+ LT+       G  ++GQLG     D LVP
Sbjct: 228 TTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVP 287

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             V      +    +A G  H AALTS    + WG    GQLG+G   + + P  V    
Sbjct: 288 IAV-ALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPA 346

Query: 572 DKQVKRV 578
           D ++  +
Sbjct: 347 DTRLTAI 353



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 155/381 (40%), Gaps = 29/381 (7%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           +  WGE    G LG G            D+  P AV       V  +A G RH + +T  
Sbjct: 56  ILAWGEN-DGGQLGNGT---------MIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSA 105

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G + +WG    G+LG+G     S P  + + +G     VA G  H+ A+T +G +  WGD
Sbjct: 106 GTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGD 165

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LFTFGDGSFG 381
            T+  G LG GS      P  VS    G  ++ I+ G  H  V+TS G  L T+G  + G
Sbjct: 166 NTF--GQLGDGSTTDRSTPVAVS-LPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRG 222

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LG G       P  V    G+  T V+ G  H+  +V+ +D ++              W
Sbjct: 223 QLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHS--LVLTSDDTA------------LAW 268

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G    G+LG+G     L P  VA         +A G   S ALT+ G  +  G    GQL
Sbjct: 269 GGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQL 328

Query: 502 G-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
           G     D   P  V               + H   +TS      WG  ANG+LG G   +
Sbjct: 329 GNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTD 388

Query: 561 RNSPTLVDFLKDKQVKRVVCG 581
           R++P  V      +V  +  G
Sbjct: 389 RSTPVAVSLPAGTRVAAIAAG 409



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 135/337 (40%), Gaps = 56/337 (16%)

Query: 190 HGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           HG A     S G V  WG  I  G LG G           T +  P AV          +
Sbjct: 98  HGLA---LTSAGTVLAWGRNI-EGQLGNGS---------TTSSSTPVAVSLPTGTRAVAV 144

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A GA H++ +T  G I +WG+ + G+LG G   D S P  + + +G  V  +A G  H  
Sbjct: 145 AAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNL 204

Query: 310 AVTRSGD-LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            +T +G  L TWG  T   G LG G+      P  V+    G+ ++ ++ G  H+ V+TS
Sbjct: 205 VLTSTGPTLLTWGKNTR--GQLGDGTTTGRDTPVAVT-LPPGVTVTSVAGGRDHSLVLTS 261

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV-------- 420
                 +G  SFG LG+G    + +P  V    G   T ++ G  H+AA+          
Sbjct: 262 DDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWG 321

Query: 421 -----------ATDSSS----SSPSGS----------------TSCGKLFTWGDGDKGRL 449
                       TDSS     S P+ +                TS G    WG    G L
Sbjct: 322 HNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGEL 381

Query: 450 GHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
           G G    R  P  V+      +  +A G D S+AL T
Sbjct: 382 GDGSTTDRSTPVAVSLPAGTRVAAIAAGDDQSMALPT 418



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 104/257 (40%), Gaps = 40/257 (15%)

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TAVV+    +  +G+   G LG+G  I +S P  V    G     V+ G  H  A+    
Sbjct: 49  TAVVSDT--ILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLAL---- 102

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                     TS G +  WG   +G+LG+G       P  V+         VA G D S+
Sbjct: 103 ----------TSAGTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSL 152

Query: 483 ALTTSGHVYTMGSAAYGQLG--------VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           ALT++G +   G   +GQLG         PVA  L         A + V  +A G  H  
Sbjct: 153 ALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLP--------AGTTVAAIAAGRDHNL 204

Query: 535 ALTSTSK-VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKW 593
            LTST   + TWGK   GQLG G    R++P  V       V  V  G +       H  
Sbjct: 205 VLTSTGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRD-------HSL 257

Query: 594 VSSVDHSVCSSCHNPFG 610
           V + D +  +   N FG
Sbjct: 258 VLTSDDTALAWGGNSFG 274



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 83/202 (41%), Gaps = 24/202 (11%)

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSP------SGSTSC--GKLFTWGDGDKGRLGHGDKE 455
           R  RV+ G +  A  V    S  +SP      S +T+     +  WG+ D G+LG+G   
Sbjct: 14  RAGRVALGWFILALAVTLAQSIGASPGWAQHRSAATAVVSDTILAWGENDGGQLGNGTMI 73

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG--------VPVAD 507
               P  V+      +  VA G    +ALT++G V   G    GQLG         PVA 
Sbjct: 74  DSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSSTPVAV 133

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
            L PT        +    VA GA H  ALTS   +  WG    GQLG G   +R++P  V
Sbjct: 134 SL-PT-------GTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAV 185

Query: 568 DFLKDKQVKRVVCGLNFTAIIC 589
                  V  +  G +   ++ 
Sbjct: 186 SLPAGTTVAAIAAGRDHNLVLT 207


>gi|82915023|ref|XP_728941.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii 17XNL]
 gi|23485631|gb|EAA20506.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii]
          Length = 426

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 181/374 (48%), Gaps = 46/374 (12%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH------GREADVS-H 286
           LP+ + +     ++ ++ G  HA  +   G+I+++G    G+LG       G+E+ +S  
Sbjct: 61  LPEKIPNFENKQINKLSAGCSHAAFIV-DGKIYTYGLNDKGQLGRTVSNGGGKESKISLT 119

Query: 287 PQLIEILSGVNVEL--VACGEYHTCAVTRSGDLYTWG-DGTYNSGL--LGHGSKVSCWIP 341
           P+ IE L   N++   V CG  HT AV  + DLY+WG  G +  G   LG G+K +   P
Sbjct: 120 PEEIE-LDDKNIKFKDVCCGYKHTLAVDVNNDLYSWGWGGNFFKGANGLGQGNKNNLMKP 178

Query: 342 RKVSG-NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE-- 398
           +K+   N D      I CG  H+  +T +G ++  G G FG LG G+H       E++  
Sbjct: 179 QKIEAFNNDNSEFINICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYF 238

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH----GD- 453
           T   +    ++CG   +AA+              ++ G+++ WG  D G+LG     GD 
Sbjct: 239 TNNNIIIKDIACGNSFSAAL--------------SNNGEVYVWGRNDYGQLGIENSIGDL 284

Query: 454 KEPRLFPECVAPLIDENIC--QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
               ++P  V     ENI    +ACG +  +A + S  +Y  GS A+ +   P A  L P
Sbjct: 285 YSHEVYPNKVKYFEIENIKIKLIACGDNHMIACSESNIIYFWGSRAWLE---PKAITLNP 341

Query: 512 TRVDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV-- 567
              +  I ++ ++++  G   Y+ + L S +K+Y+WGK  +  L   DK N N PTLV  
Sbjct: 342 KYQNSLIKKN-IDKIQAGGSTYYYSMLISDNKLYSWGKHNSSCLALKDKKNHNEPTLVDS 400

Query: 568 DFLKDKQVKRVVCG 581
           D   ++ +  + CG
Sbjct: 401 DLFNNEIICDISCG 414



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 35/302 (11%)

Query: 198 DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES--TMALDVHNIACGARH 255
           D   D++ WG G  N F G      G     + + + P+ +E+      +  NI CG +H
Sbjct: 146 DVNNDLYSWGWG-GNFFKGAN----GLGQGNKNNLMKPQKIEAFNNDNSEFINICCGEQH 200

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--VACGEYHTCAVTR 313
           ++ +TK G+++  G+   GRLG G   D    + I+  +  N+ +  +ACG   + A++ 
Sbjct: 201 SLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNIIIKDIACGNSFSAALSN 260

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN------LDGIHLSYISCGLWHTAVVT 367
           +G++Y WG   Y  G LG  + +      +V  N      ++ I +  I+CG  H    +
Sbjct: 261 NGEVYVWGRNDY--GQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMIACS 318

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            +  ++ +G  ++          T  P+   +L      ++  G             S+ 
Sbjct: 319 ESNIIYFWGSRAWLE----PKAITLNPKYQNSLIKKNIDKIQAG------------GSTY 362

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI--DENICQVACGHDLSVALT 485
             S   S  KL++WG  +   L   DK+    P  V   +  +E IC ++CGH   +A T
Sbjct: 363 YYSMLISDNKLYSWGKHNSSCLALKDKKNHNEPTLVDSDLFNNEIICDISCGHGRVLAKT 422

Query: 486 TS 487
            +
Sbjct: 423 LA 424


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 52/395 (13%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++ WG    N F   G+  +G S S+ +  L+P         +V  +AC +  +  + K 
Sbjct: 32  LYAWG---WNNF---GQLGIGNSISQYSPQLVP-------IQNVLFVACKSSVSAAIDKS 78

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           G++++WG    G LG+G+  +++ P L+E L  ++ + VACG YH  A+TR G LYTWG+
Sbjct: 79  GKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGN 138

Query: 323 GTYNSGLLGHGSKVSCWIPRK----VSGNL------DGIHLSY----ISCGLWHTAVVTS 368
              + G LGH       +P +       NL      + + L++    +S G   T +++ 
Sbjct: 139 --QDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSD 196

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G++++ G    G LG+          E +    L   ++S         ++  DS +  
Sbjct: 197 DGNVYSVGLNKKGILGY----------ETKNAEELSFKQIS-----NLKNIIQIDSGTDF 241

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                S G +F WG    G+LG         P+ +  L    I Q +CG     AL+  G
Sbjct: 242 SVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGL--PKIKQFSCGEQFIGALSADG 299

Query: 489 HVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            +YT G    GQLG P    +  P ++     +  +++V+CG  HV  + S +K+Y  G+
Sbjct: 300 VLYTWGFGGDGQLGTPSKQDIPTPHKIS---FDHNIDKVSCGQAHV-GIISNNKLYMHGR 355

Query: 548 GANGQLGHG-DKDNRNSPTLVDFLKDKQVKRVVCG 581
           G  GQLG G + ++ NS      L  + V ++ CG
Sbjct: 356 GKEGQLGRGSETESPNSSRYSPLLVLENVLKIACG 390



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 147/361 (40%), Gaps = 71/361 (19%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           + + +V+  +   S     D  G ++ WG     G LG G+           +  +P  V
Sbjct: 57  VPIQNVLFVACKSSVSAAIDKSGKLYTWGRS-KFGLLGNGQVE---------NINIPTLV 106

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG---------RE-------- 281
           E    LD   +ACG  H   +T+ G++++WG +  G+LGH          RE        
Sbjct: 107 ECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNL 166

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                P+L+++     V  V+ G+  T  ++  G++Y+   G    G+LG+ +K +  + 
Sbjct: 167 GSAKLPELVKL--NFKVHQVSLGDQFTLILSDDGNVYS--VGLNKKGILGYETKNAEELS 222

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
            K   NL  I    I  G   +  + S G++F +G   FG LG         P++++ L 
Sbjct: 223 FKQISNLKNI--IQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLP 280

Query: 402 GLRTTRVSCGVWHTAAV----VVAT-----DSSSSSPS----------------GSTSCG 436
            ++  + SCG     A+    V+ T     D    +PS                   SCG
Sbjct: 281 KIK--QFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCG 338

Query: 437 ----------KLFTWGDGDKGRLGHGDKEPRLFPECVAPL-IDENICQVACGHDLSVALT 485
                     KL+  G G +G+LG G +         +PL + EN+ ++ACG   S A+ 
Sbjct: 339 QAHVGIISNNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVLENVLKIACGGSHSFAIV 398

Query: 486 T 486
            
Sbjct: 399 N 399


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 34/379 (8%)

Query: 233  LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            LLP  V+   +     IA G  H V V + G +++WG    G+LG G  A    P  +++
Sbjct: 812  LLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV 871

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
               ++V  +A G YH  A  + G L+TWG  +Y  G LG G      +P +V G +D   
Sbjct: 872  QGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSY--GQLGGGPLSYRLLPVQVQGLMD--- 926

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
            ++ ++ G +H A     G L+T+G  S+G LG G      +P +V+ L  +  T ++ G 
Sbjct: 927  VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGG 984

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            +H AA              +   G L+TWG    G+LG G     L P  V       + 
Sbjct: 985  YHMAA--------------AGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVA 1030

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAY 531
             +A G   ++A+   G V++ G  AYGQLG    A  L P +V G      V  ++ G  
Sbjct: 1031 AIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTG---VTAISAGDA 1087

Query: 532  HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
            H  AL     V+ WG+ + GQLG G   +R +P  V  L          G+   A   LH
Sbjct: 1088 HTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL---------TGVIAIAAGSLH 1138

Query: 592  KWVSSVDHSVCSSCHNPFG 610
                  D +V +   N +G
Sbjct: 1139 TVALRQDGTVWAWGRNSWG 1157



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 179/394 (45%), Gaps = 44/394 (11%)

Query: 179  ISLSSVVSSSSH-GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
            +S++++ +   H  +A +D    G ++ WG   + G LGGG           + +L P  
Sbjct: 975  MSVTAMAAGGYHMAAAGQD----GTLWTWGLN-SYGQLGGGPL---------SQSLTPVQ 1020

Query: 238  VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
            V+      V  IA G  H + V + G ++SWG  + G+LG G  A    P  ++ L+GV 
Sbjct: 1021 VQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGVT 1080

Query: 298  VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
               ++ G+ HT A+ R G ++ WG  ++  G LG G+      P +V G L G+    I+
Sbjct: 1081 A--ISAGDAHTVALRRDGTVWAWGRNSW--GQLGDGTTTHRATPVQVQG-LTGV--IAIA 1133

Query: 358  CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
             G  HT  +   G ++ +G  S+G LG G     + P +V+ L G+    ++ G  HT A
Sbjct: 1134 AGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1191

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            +                 G ++ WG  D G+LG G    RL P  V  L    +  +A G
Sbjct: 1192 L--------------RQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL--TGVTTIAAG 1235

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            +  + A+   G  +T G   +GQLG     D   P +V G      V  +A G  H   +
Sbjct: 1236 YFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG---VSALAAGYAHTVVV 1292

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
                 V+ WG  +  QLG+G   +R++P  V+ L
Sbjct: 1293 GEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL 1326



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 158/361 (43%), Gaps = 39/361 (10%)

Query: 233  LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            LLP  V+  M+  V  +A G  H     + G +++WG  S G+LG G  +    P  +++
Sbjct: 966  LLPVQVQGLMS--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQV 1023

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                 V  +A G  HT AV + G +++WG   Y  G LG G+      P +V G L G+ 
Sbjct: 1024 QGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAY--GQLGDGTTAQSLTPVQVQG-LTGV- 1079

Query: 353  LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
             + IS G  HT  +   G ++ +G  S+G LG G     + P +V+ L G+    ++ G 
Sbjct: 1080 -TAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGS 1136

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
             HT A+                 G ++ WG    G+LG G    R  P  V  L    + 
Sbjct: 1137 LHTVAL--------------RQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL--TGVI 1180

Query: 473  QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVA 527
             +A G   +VAL   G V+  G    GQLG    DG     L P +V G      V  +A
Sbjct: 1181 AIAAGSLHTVALRQDGTVWAWGFNDLGQLG----DGTTTRRLTPAQVQGLTG---VTTIA 1233

Query: 528  CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAI 587
             G +H AA+      +TWG    GQLG G   +R +P  V  L    V  +  G   T +
Sbjct: 1234 AGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG--VSALAAGYAHTVV 1291

Query: 588  I 588
            +
Sbjct: 1292 V 1292



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 40/362 (11%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A    H + V + G +++WG    G+LG G       P  +++++G     +A G YHT 
Sbjct: 79  AGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSP--VQVMTGATA--IAAGIYHTV 134

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           A ++ G ++TWG    +SG LG G+ +  + P +V G L G+  + ++ G  H+A +   
Sbjct: 135 AASQDGTVWTWGR--NSSGQLGDGTSIQRFSPVQVQG-LTGV--TAVAAGRNHSAALGQG 189

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G ++T+GD   G LG G       P +V+ L G                V+A  ++ S  
Sbjct: 190 GTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTG----------------VIAISANDSET 233

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                 G ++ WG+   G+LG G    R  P  V  L    +  +A G   +VAL   G 
Sbjct: 234 VALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGL--TGVTAIAAGGGFAVALRQDGT 291

Query: 490 VYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           ++  GS + GQLG     G   P +V G      V  +A    H  AL     ++ WG  
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRPEQVQGLTG---VTAIAASGIHTVALRQDGTLWAWGNN 348

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNP 608
           ++GQLG G    R +P  V  L    V  +  G  +T         S  D +V +   N 
Sbjct: 349 SSGQLGDGTTTVRFTPVQVQGLTG--VTAIAAGYLYTV-------ASKQDGTVWAWGDNE 399

Query: 609 FG 610
           +G
Sbjct: 400 WG 401



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 158/341 (46%), Gaps = 29/341 (8%)

Query: 233  LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            L P  V+  M  DV  +A G  H     + G +++WG  S G+LG G  +    P  ++ 
Sbjct: 762  LTPVQVQGLM--DVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQG 819

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP--RKVSGNLDG 350
            L+      +A G+ HT AV + G ++ W  G+  SG LG G+      P   +V G +D 
Sbjct: 820  LTSATATAIAAGDSHTVAVRQDGTVWAW--GSNFSGQLGDGTTAQSLTPVQVQVQGLMD- 876

Query: 351  IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
              ++ ++ G +H A     G L+T+G  S+G LG G      +P +V+ L  +  T ++ 
Sbjct: 877  --VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL--MDVTAMAA 932

Query: 411  GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN 470
            G +H AA              +   G L+TWG    G+LG G    RL P  V  L+  +
Sbjct: 933  GGYHMAA--------------AGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLM--S 976

Query: 471  ICQVACGHDLSVALTTSGHVYTMGSAAYGQL-GVPVADGLVPTRVDGEIAESFVEEVACG 529
            +  +A G     A    G ++T G  +YGQL G P++  L P +V  +   + V  +A G
Sbjct: 977  VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQ-GLTGVAAIAAG 1035

Query: 530  AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
              H  A+     V++WG  A GQLG G      +P  V  L
Sbjct: 1036 FSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGL 1076



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 155/347 (44%), Gaps = 32/347 (9%)

Query: 265  IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
            +++WG+   G+LG G       P  ++ L  ++V  +A G YH  A  + G L+TWG  +
Sbjct: 742  LWAWGDNHWGQLGDGTTTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNS 799

Query: 325  YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
            Y  G LG G      +P +V G L     + I+ G  HT  V   G ++ +G    G LG
Sbjct: 800  Y--GQLGGGPLSYRLLPVQVQG-LTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLG 856

Query: 385  HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
             G    +  P +V+    +  T ++ G +H AA              +   G L+TWG  
Sbjct: 857  DGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAA--------------AGQDGTLWTWGLN 902

Query: 445  DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
              G+LG G    RL P  V  L+D  +  +A G     A    G ++T G  +YGQLG  
Sbjct: 903  SYGQLGGGPLSYRLLPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 960

Query: 504  PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS 563
            P++  L+P +V G ++   V  +A G YH+AA      ++TWG  + GQLG G      +
Sbjct: 961  PLSYRLLPVQVQGLMS---VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLT 1017

Query: 564  PTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
            P  V       V  +  G + T  +         D +V S   N +G
Sbjct: 1018 PVQVQVQGLTGVAAIAAGFSHTLAV-------RQDGTVWSWGGNAYG 1057



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 144/328 (43%), Gaps = 29/328 (8%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  IA G  + V   + G +++WG+   G+LG G       P  ++ L+GV    +A G 
Sbjct: 373 VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTA--IAAGY 430

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            +T A  + G ++ WGD   +   LG G+      P +V G L+GI     S  L  T  
Sbjct: 431 LYTVASKQDGTVWAWGDNKRSQ--LGEGAVSQRHTPGEVQG-LEGITAIAASNLL--TVA 485

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           V   G ++ +GD + G LG G       P +V+ L G+  T V+   +H  AV       
Sbjct: 486 VRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGV--TAVAASDYHLVAV------- 536

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G ++ WG G  G+LG G    R  P  V  L    +  +A G + +VAL 
Sbjct: 537 -------RQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGL--TGVTAIAAGSNHTVALR 587

Query: 486 TSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G V+  G   YGQLG     G L P +V G         +A G  H  AL     V+T
Sbjct: 588 QDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGA---VAIAAGGSHTVALLQDGTVWT 644

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           WG    GQLG G   +R+SP  V  L D
Sbjct: 645 WGYNIWGQLGDGTTTHRHSPVQVQGLAD 672



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 145/334 (43%), Gaps = 43/334 (12%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IA G  H V + + G +++WG    G+LG G       P  ++ L+  +V  +A    HT
Sbjct: 626 IAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLA--DVIAIATNNGHT 683

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            AV + G ++TWG    +SG LG G+      P +V G  D             TA++TS
Sbjct: 684 VAVRQDGTVWTWG--LNSSGQLGDGTTTQRLTPVQVHGLTD------------ATAILTS 729

Query: 369 AGH---------LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
           +           L+ +GD  +G LG G       P +V+ L  +  T ++ G +H AA  
Sbjct: 730 SSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL--MDVTAMAAGGYHMAA-- 785

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                       +   G L+TWG    G+LG G    RL P  V  L       +A G  
Sbjct: 786 ------------AGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDS 833

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
            +VA+   G V+  GS   GQLG    A  L P +V  +     V  +A G YH+AA   
Sbjct: 834 HTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQ-GLMDVTAMAAGGYHMAAAGQ 892

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
              ++TWG  + GQLG G    R  P  V  L D
Sbjct: 893 DGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD 926



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 158/375 (42%), Gaps = 49/375 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+  A G LG G           T  L P  V+      V  +A    H V V 
Sbjct: 490 GTVWAWGDN-ARGQLGDGT---------TTRRLTPVQVQGLAG--VTAVAASDYHLVAVR 537

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           + G +++WG    G+LG G   D S P  ++ L+GV    +A G  HT A+ + G ++ W
Sbjct: 538 QDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAW 595

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G   Y  G LG G+      P +V G    +    I+ G  HT  +   G ++T+G   +
Sbjct: 596 GFNNY--GQLGDGTTAGHLTPVQVPGVTGAVA---IAAGGSHTVALLQDGTVWTWGYNIW 650

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G       P +V+ L  +     + G  HT AV                 G ++T
Sbjct: 651 GQLGDGTTTHRHSPVQVQGLADVIAIATNNG--HTVAV--------------RQDGTVWT 694

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG    G+LG G    RL P  V  L D      +     +VA+     ++  G   +GQ
Sbjct: 695 WGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQ--TVAMRQDRTLWAWGDNHWGQ 752

Query: 501 LGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
           LG    DG     L P +V G +    V  +A G YH+AA      ++TWG  + GQLG 
Sbjct: 753 LG----DGTTTRRLTPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGG 805

Query: 556 GDKDNRNSPTLVDFL 570
           G    R  P  V  L
Sbjct: 806 GPLSYRLLPVQVQGL 820



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 141/342 (41%), Gaps = 39/342 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           IA G  H V  ++ G +++WG  S G+LG G       P  ++ L+GV    VA G  H+
Sbjct: 126 IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTA--VAAGRNHS 183

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+ + G ++TWGD     G LG G+      P +V G    I +S        T  +  
Sbjct: 184 AALGQGGTVWTWGDNLV--GQLGDGTSTQRLTPVQVQGLTGVIAISANDS---ETVALRQ 238

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G ++ +G+ S G LG G       P +V  L G+       G     AV +  D     
Sbjct: 239 DGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGF----AVALRQD----- 289

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                  G L+ WG   +G+LG+G       PE V  L    +  +A     +VAL   G
Sbjct: 290 -------GTLWAWGSNSRGQLGNGTTFGSYRPEQVQGL--TGVTAIAASGIHTVALRQDG 340

Query: 489 HVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            ++  G+ + GQLG    DG       P +V G      V  +A G  +  A      V+
Sbjct: 341 TLWAWGNNSSGQLG----DGTTTVRFTPVQVQGLTG---VTAIAAGYLYTVASKQDGTVW 393

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            WG    GQLG G    R +P  V  L    V  +  G  +T
Sbjct: 394 AWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYT 433



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 27/255 (10%)

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            IA G+ H V + + G +++WG  S G+LG G     + P  ++ L+GV    +A G  HT
Sbjct: 1132 IAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIA--IAAGSLHT 1189

Query: 309  CAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
             A+ + G ++ WG   +N  G LG G+      P +V G L G+  + I+ G +HTA V 
Sbjct: 1190 VALRQDGTVWAWG---FNDLGQLGDGTTTRRLTPAQVQG-LTGV--TTIAAGYFHTAAVR 1243

Query: 368  SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
              G  +T+G   +G LG G     + P +V+ L G+  + ++ G  HT  VVV  D    
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGV--SALAAGYAHT--VVVGED---- 1295

Query: 428  SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                    G ++ WG+    +LG+G    R  P  V  L       +A G   +VA++  
Sbjct: 1296 --------GTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL--TGAFSLAAGRFHTVAMSPD 1345

Query: 488  GHVYTMGSAAYGQLG 502
            G  +  G    GQ+G
Sbjct: 1346 GAGWGWGRNNLGQVG 1360



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 230  TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            TD   P  V+      V  +A G  H V+V + G +++WG  SG +LG+G   D S P  
Sbjct: 1265 TDRATPVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQ 1322

Query: 290  IEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            +E L+G     +A G +HT A++  G  + WG
Sbjct: 1323 VEALTGAFS--LAAGRFHTVAMSPDGAGWGWG 1352



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 11/171 (6%)

Query: 233  LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
            L P  V+      V  IA G  H   V + G  ++WG    G+LG G   D + P  ++ 
Sbjct: 1218 LTPAQVQGLTG--VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQG 1275

Query: 293  LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGL-LGHGSKVSCWIPRKVSGNLDGI 351
            L+GV+   +A G  HT  V   G ++ WG+   NSG  LG+GS      P +V       
Sbjct: 1276 LTGVSA--LAAGYAHTVVVGEDGTVWAWGN---NSGTQLGNGSSTDRSTPVQVEALTGAF 1330

Query: 352  HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
             L+    G +HT  ++  G  + +G  + G +G G       P  V    G
Sbjct: 1331 SLA---AGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNVMVQEG 1378


>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 1493

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 143/316 (45%), Gaps = 41/316 (12%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           IE+   + +   A GE H   VT    +Y+WG G  + G LGHG+  S   P  V  +L+
Sbjct: 544 IELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSG--DKGQLGHGNMESKMKPELVQ-SLN 600

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
           G  +S   CG   +   +  G + T GDG+ G LGHGD +S   PR +ETL  L    +S
Sbjct: 601 GKSISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAIS 660

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV---APL 466
           CG  H   V    +                TWG G  GRLG G ++    P+ +    P+
Sbjct: 661 CGSKHVVVVGSEGEV--------------LTWGCGADGRLGLGTEDNHCQPQELRIEEPV 706

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--------PTRVDGE- 517
           +   I  V CG D ++ LT  G VY  GS +  +LG+    G +         T V+G  
Sbjct: 707 V---IRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSN 763

Query: 518 -------IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
                  +A   V  ++ GA H A +     +YT+GK + GQLG GD     +P  V  +
Sbjct: 764 VPTPVRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM 823

Query: 571 KDKQVKRVVCGLNFTA 586
            +    RV CG ++T 
Sbjct: 824 LES--VRVQCGNHYTV 837



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 159/337 (47%), Gaps = 29/337 (8%)

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           V + F   T ++ P  +E    + + + A G  H ++VT + +++SWG    G+LGHG  
Sbjct: 530 VFFYFESCTASMTP--IELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNM 587

Query: 282 ADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIP 341
                P+L++ L+G ++    CGE  +   + +G + T GDGT  SG LGHG  +SC+ P
Sbjct: 588 ESKMKPELVQSLNGKSISRACCGEGFSIFASDNGIVLTCGDGT--SGCLGHGDTLSCYRP 645

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
           R +   L  + +  ISCG  H  VV S G + T+G G+ G LG G   +   P+E+    
Sbjct: 646 RLIE-TLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEE 704

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-- 459
            +    V CGV  T   +  TD  S    GS S  KL     G   R G       +F  
Sbjct: 705 PVVIRDVFCGVDGT---MFLTDVGSVYACGSNSDNKL-----GLNNRQGFIMAMKNIFTK 756

Query: 460 --------PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVP 511
                   P  V  L    +  ++ G   +  +   GH+YT G  + GQLG+       P
Sbjct: 757 TEVEGSNVPTPVRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGI---GDTKP 813

Query: 512 TRVDGEIAESFVE--EVACGAYHVAALTSTSKVYTWG 546
           +R   E+ ++ +E   V CG ++    T+++++Y WG
Sbjct: 814 SRAPVEV-KAMLESVRVQCGNHYTVCSTTSNELYYWG 849



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 119/257 (46%), Gaps = 43/257 (16%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V   G+G + G LG G+    Y          P+ +E+ ++LDV  I+CG++H V+V 
Sbjct: 621 GIVLTCGDGTS-GCLGHGDTLSCYR---------PRLIETLLSLDVIAISCGSKHVVVVG 670

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
            +GE+ +WG  + GRLG G E +   PQ + I   V +  V CG   T  +T  G +Y  
Sbjct: 671 SEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTMFLTDVGSVYAC 730

Query: 321 GDGTYNSGLLGHGSKVSCWIPRK---VSGNLDGIHLSY------------ISCGLWHTAV 365
           G  + N   LG  ++    +  K       ++G ++              IS G  HTAV
Sbjct: 731 GSNSDNK--LGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGACHTAV 788

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   GH++TFG  S G LG GD   +  P EV+ +  L + RV CG  +T          
Sbjct: 789 IVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM--LESVRVQCGNHYTVC-------- 838

Query: 426 SSSPSGSTSCGKLFTWG 442
                 ST+  +L+ WG
Sbjct: 839 ------STTSNELYYWG 849



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 83/156 (53%)

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           T+  ++++WG GDKG+LGHG+ E ++ PE V  L  ++I +  CG   S+  + +G V T
Sbjct: 566 TTEKQVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCGEGFSIFASDNGIVLT 625

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G    G LG          R+   +    V  ++CG+ HV  + S  +V TWG GA+G+
Sbjct: 626 CGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGR 685

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LG G +DN   P  +   +   ++ V CG++ T  +
Sbjct: 686 LGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTMFL 721



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           +   A G  HV  +T+  +VY+WG G  GQLGHG+ +++  P LV  L  K + R  CG 
Sbjct: 552 IRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCGE 611

Query: 583 NFT--------AIICLHKWVSSVDHSVCSSCHNP 608
            F+         + C       + H    SC+ P
Sbjct: 612 GFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRP 645


>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Strongylocentrotus
            purpuratus]
          Length = 1514

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 173/416 (41%), Gaps = 103/416 (24%)

Query: 245  DVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL----SGVNV 298
            DV  IA     +H + +T   E+++WG   GGRLG G  +    P L++ L    +G +V
Sbjct: 777  DVIQIAAHPEGKHYLALTADWEVYAWGNGEGGRLGLGNTSAREDPTLVQGLPSQSTGQHV 836

Query: 299  ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS- 357
              ++CG  ++ A+T +G++YTWG G Y  G LGHG+      P+ VS + D +    +S 
Sbjct: 837  IQISCGSSYSAALTSNGEVYTWGRGIY--GRLGHGNSDDQLTPKLVSNSDDQLTPKLVSN 894

Query: 358  ----------CGL--------------WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
                       GL                T  VT  G LF+FG+G +G LG G      +
Sbjct: 895  SDDQLTPKLVSGLKEQKFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL 954

Query: 394  PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD 453
            P+ V+ L+G    +  CG  +  +V++            T  G ++TWG GD  RLGHG 
Sbjct: 955  PKLVDKLQGQHAVKACCG--NQFSVIL------------TKTGTVYTWGKGDGHRLGHGS 1000

Query: 454  KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
            +E + FP+ +  L  + I  +      +VA+  SG  +  G    GQLG+          
Sbjct: 1001 EEHQRFPKMIEALRGKKIVDIQSSGCHTVAIAESGEFFCWGRNDQGQLGL---------- 1050

Query: 514  VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
              GE                AAL                     K N+  PTL++ ++ K
Sbjct: 1051 --GE----------------AAL---------------------KSNKGEPTLIECMEGK 1071

Query: 574  QVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKAC 629
            ++  + CG+  T       W SS   SV    H PF     R       L+  + C
Sbjct: 1072 KLCGLACGVAQT-----FAWTSSAHWSV--GLHVPFSVDVTRTTFEKLDLLLQRVC 1120



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 144/321 (44%), Gaps = 60/321 (18%)

Query: 202  DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
            +V+ WG G       GG   +G + +R+   L+      +    V  I+CG+ ++  +T 
Sbjct: 798  EVYAWGNG------EGGRLGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYSAALTS 851

Query: 262  QGEIFSWGEESGGRLGHGREADVSHPQLI---------------------EILSGVNVEL 300
             GE+++WG    GRLGHG   D   P+L+                     +++SG+  + 
Sbjct: 852  NGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLKEQK 911

Query: 301  ---VACG--EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
               +A G  +  T AVT +G L+++G+G Y  G LG G    C +P+ V   L G H   
Sbjct: 912  FIHIALGSNDGQTLAVTDTGLLFSFGNGDY--GKLGRGGSDGCKLPKLVD-KLQGQHAVK 968

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
              CG   + ++T  G ++T+G G    LGHG       P+ +E LRG +   +     HT
Sbjct: 969  ACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHT 1028

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-------EPRLFPECVAPLID 468
             A+                 G+ F WG  D+G+LG G+        EP L  EC+     
Sbjct: 1029 VAIA--------------ESGEFFCWGRNDQGQLGLGEAALKSNKGEPTLI-ECME---G 1070

Query: 469  ENICQVACGHDLSVALTTSGH 489
            + +C +ACG   + A T+S H
Sbjct: 1071 KKLCGLACGVAQTFAWTSSAH 1091



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 120/294 (40%), Gaps = 42/294 (14%)

Query: 144  NTNSRADSVSFSPSPLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDV 203
            NT++R D        L    P     +S+     +IS  S  S++          S G+V
Sbjct: 814  NTSAREDPT------LVQGLPS----QSTGQHVIQISCGSSYSAA--------LTSNGEV 855

Query: 204  FIWGEGIANGFLGGG---------------EHRVGYSFSRQTDALLPKAVESTMALDVHN 248
            + WG GI  G LG G               +       S   D L PK V         +
Sbjct: 856  YTWGRGI-YGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLKEQKFIH 914

Query: 249  IACGAR--HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY 306
            IA G+     + VT  G +FS+G    G+LG G       P+L++ L G +     CG  
Sbjct: 915  IALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVKACCGNQ 974

Query: 307  HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
             +  +T++G +YTWG G  +   LGHGS+     P+ +   L G  +  I     HT  +
Sbjct: 975  FSVILTKTGTVYTWGKG--DGHRLGHGSEEHQRFPKMIEA-LRGKKIVDIQSSGCHTVAI 1031

Query: 367  TSAGHLFTFGDGSFGALGHGDHISTS---IPREVETLRGLRTTRVSCGVWHTAA 417
              +G  F +G    G LG G+    S    P  +E + G +   ++CGV  T A
Sbjct: 1032 AESGEFFCWGRNDQGQLGLGEAALKSNKGEPTLIECMEGKKLCGLACGVAQTFA 1085



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLS--VALTTSGHVYTMGSAAYGQLGVPVA 506
           L + + EP  F   V  L ++++ Q+A   +    +ALT    VY  G+   G+LG+   
Sbjct: 757 LQYFNNEPPGF-HLVDGLSNKDVIQIAAHPEGKHYLALTADWEVYAWGNGEGGRLGLGNT 815

Query: 507 DGLV-PTRVDGEIAES---FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRN 562
                PT V G  ++S    V +++CG+ + AALTS  +VYTWG+G  G+LGHG+ D++ 
Sbjct: 816 SAREDPTLVQGLPSQSTGQHVIQISCGSSYSAALTSNGEVYTWGRGIYGRLGHGNSDDQL 875

Query: 563 SPTLVDFLKDKQVKRVV 579
           +P LV    D+   ++V
Sbjct: 876 TPKLVSNSDDQLTPKLV 892


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 172/391 (43%), Gaps = 51/391 (13%)

Query: 204 FIWGEGI-ANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           ++W  G    G LG G +          + L+P+ V     L V  ++ G +H+ LVT+ 
Sbjct: 85  YVWSFGQNTKGELGTGHY---------NEVLMPERVRGLPKLKVIFLSSGGKHSGLVTED 135

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQL--IEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           G+++  G     +LG       S      +E+L+ + ++ VACG+YHT A+++ G +Y W
Sbjct: 136 GKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVW 195

Query: 321 GDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           G   +N  G      K +      +  +  G  +  I CG +H+  +   G L+++G G 
Sbjct: 196 GGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGE 255

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G  GHG       P+ ++   G   T++  G  HT A+              T+  +++
Sbjct: 256 KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAI--------------TADNQVY 301

Query: 440 TWGDGDKGRLGHGDKEPRLFPECV--------APLIDEN--------------ICQVACG 477
            WGDG  G+ G G+ E    P+ V           +D++              I Q+A G
Sbjct: 302 AWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAG 361

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAAL 536
              ++ LT+SG +++ G    GQLG    D    P  V+G +    V +VA G  H   L
Sbjct: 362 EMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTV-QVAAGRNHSLCL 420

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
           T+ + VY  G    GQ G  D++ R + + V
Sbjct: 421 TNKNDVYACGNNQYGQCGLPDREMRKTFSHV 451



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 165/359 (45%), Gaps = 57/359 (15%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++S+G+ + G LG G   +V  P+ +  L  + V  ++ G  H+  VT  G L+  G   
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145

Query: 325 YNS-GLLG--HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
           ++  GL G   GSK   + P ++   L  I +  ++CG +HT  ++  G ++ +G    G
Sbjct: 146 HDKLGLEGITTGSK-KTFKPVEL---LTQIFIKQVACGDYHTLALSKEGQVYVWG----G 197

Query: 382 ALGH--GDHI------STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +L +  GD        +   P  +++  G +  ++ CG +H+ A+               
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL--------------D 243

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G L++WG G+KG  GHG  E +  P+ +     + I Q+  G+  ++A+T    VY  
Sbjct: 244 DNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAW 303

Query: 494 GSAAYGQLGV-PVADGLVPTRVD----------------GEIAESF-----VEEVACGAY 531
           G   YGQ G     +  +P  V+                 EI E F     ++++A G  
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEM 363

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           H   LTS+ +++++G    GQLGH   DN   P LV+ + + +  +V  G N +  +CL
Sbjct: 364 HTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHS--LCL 420



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 31/258 (12%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALL-PKAVESTMALDVHNIACGARHAVLV 259
           G V++WG  + N        R   S  R+ +A   P  ++S     +  I CG  H++ +
Sbjct: 190 GQVYVWGGSLHN-------KRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL 242

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              G ++SWG    G  GHG+  D   PQ I+   G  +  +  G +HT A+T    +Y 
Sbjct: 243 DDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYA 302

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY---------------------ISC 358
           WGDG Y  G  G G   +  IP+ V+    G + SY                     I+ 
Sbjct: 303 WGDGRY--GQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAA 360

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
           G  HT V+TS+G +F+FG    G LGH    +   P+ VE +   +T +V+ G  H+  +
Sbjct: 361 GEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCL 420

Query: 419 VVATDSSSSSPSGSTSCG 436
               D  +   +    CG
Sbjct: 421 TNKNDVYACGNNQYGQCG 438



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 26/227 (11%)

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           ++++FG  + G LG G +    +P  V  L  L+   +S G  H+  V            
Sbjct: 85  YVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLV------------ 132

Query: 431 GSTSCGKLFTWGDGDKGRLG-----HGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
             T  GKL+  G     +LG      G K+     E +  +    I QVACG   ++AL+
Sbjct: 133 --TEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIF---IKQVACGDYHTLALS 187

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTSTSK 541
             G VY  G + + + G    +     +    + +SF    ++++ CG +H  AL     
Sbjct: 188 KEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGT 247

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +Y+WG G  G+ GHG  +++ +P  + F   K + ++  G + T  I
Sbjct: 248 LYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAI 294


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 168/348 (48%), Gaps = 40/348 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           VH ++CG  H+ +VT+  +++ +G  + G+LG G ++ VS P  ++ L    V+L ACG 
Sbjct: 38  VH-LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H    T  G++Y  G    N G LG G          +S       +  +S G   +A 
Sbjct: 97  NHILVSTEGGNVYATGGN--NEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           VT  G LF +G  S G +G  +  +  +P++V    G   + +SCG +H+A V       
Sbjct: 155 VTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTI--GKPVSWISCGYYHSAFV------- 205

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLG------HGDKEPRLFPECVAPLIDENICQVACGHD 479
                  T+ G+L+ +G+ + G+LG         + P+L  E     I E + QVA G +
Sbjct: 206 -------TTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSE-----IPEKVIQVARGGE 253

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAAL 536
            +V LT +  VYT G   +GQLG  +   L  T   +V   I +  +  ++CG  H A +
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLG--LGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS--PTLV-DFLKDKQVKRVVCG 581
                +YT+G   +G+LG G ++  N   PTL  DFL+   VK V CG
Sbjct: 311 RDIGLMYTFGNSRHGKLGLGLENFTNHFIPTLCSDFLR-FIVKLVACG 357



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 155/317 (48%), Gaps = 41/317 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++     V   ACG  H ++ T+ G +++ G  + G+LG G   + +   +I   +
Sbjct: 78  PTCVKALKPEKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
             + ++ ++ G   + AVT  G L+ WG  +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SEHKIKQLSAGSNTSAAVTEDGRLFMWGKNS--EGQIGLKNVPNVCVPQQVT---IGKPV 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG-----HGDHISTSIPREVETLRGLRTTRV 408
           S+ISCG +H+A VT+ G L+ FG+   G LG      G+H +  +  E+      +  +V
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIPE----KVIQV 248

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVA 464
           + G  HT   VV T+++            ++T+G G  G+LG G     LF    P+ + 
Sbjct: 249 ARGGEHT---VVLTENA------------VYTFGLGQFGQLGLGT---FLFETSEPKVIE 290

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAES 521
            + D+ I  ++CG + +  +   G +YT G++ +G+LG+ +    +  +PT    +    
Sbjct: 291 NIRDQTISYISCGENHTALIRDIGLMYTFGNSRHGKLGLGLENFTNHFIPTLC-SDFLRF 349

Query: 522 FVEEVACGAYHVAALTS 538
            V+ VACG  H+    +
Sbjct: 350 IVKLVACGGCHMVVFAA 366



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 20/221 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G       +  +P+ V  T+   V  I+CG  H+  VT
Sbjct: 159 GRLFMWGKN--------SEGQIG--LKNVPNVCVPQQV--TIGKPVSWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++ +GE   G+LG   +   +H  PQL+  +    +++   GE HT  +T +  +Y
Sbjct: 207 TDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIPEKVIQVARGGE-HTVVLTENA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           T+G G +  G LG G+ +      KV  N+    +SYISCG  HTA++   G ++TFG+ 
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFGNS 322

Query: 379 SFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAA 417
             G LG G    T+  IP             V+CG  H   
Sbjct: 323 RHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVV 363



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 37/230 (16%)

Query: 365 VVTSAGHLFTFGDGSFGALGHGDH-ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           ++  +G +FTFG   F     G       +P             +SCG  H+A V     
Sbjct: 7   LMPDSGAVFTFGKSKFAENNPGKFWFKNDVP-----------VHLSCGDEHSAVV----- 50

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    T   KL+ +G  + G+LG G K     P CV  L  E +   ACG +  + 
Sbjct: 51  ---------TRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHILV 101

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF-----VEEVACGAYHVAALTS 538
            T  G+VY  G    GQLG+    G    R    +   F     +++++ G+   AA+T 
Sbjct: 102 STEGGNVYATGGNNEGQLGL----GDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAVTE 157

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
             +++ WGK + GQ+G  +  N   P  V     K V  + CG   +A +
Sbjct: 158 DGRLFMWGKNSEGQIGLKNVPNVCVPQQVTI--GKPVSWISCGYYHSAFV 205


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 33/357 (9%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC- 303
           + ++A G     +V   G +F+ G    G+ G+G  E  V     +  LSG+ + +VA  
Sbjct: 499 IRDVAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAA 558

Query: 304 -GEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGL 360
            G  H  AV   G +++WG   YN  G LG GS +S    PR +    +  H++  +   
Sbjct: 559 NGCEHMLAVASDGAVFSWG---YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSY 615

Query: 361 WHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            H+AVV+S G L TFG    G LG  H  H  T  P+ V+ L     T+ +CG++HT A 
Sbjct: 616 HHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHT--PQVVDALSSQVVTKAACGLYHTVA- 672

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI---DENICQVA 475
                        +TS G+++++G  D G+LG G       P  V   +   DE I  V+
Sbjct: 673 -------------ATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVS 719

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CG+  +V ++  G + T G   YGQLG+   +     +       S ++  +CG YH   
Sbjct: 720 CGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLI 779

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNS----PTLVDFLKDKQVKRVVCGLNFTAII 588
           L S  +V  +G+   GQLG G +   ++    P   + L + +V R+  G   + I+
Sbjct: 780 LMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 836



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 152/331 (45%), Gaps = 21/331 (6%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E+FS G+ + G L  G     S  + +   S   +  VA G      V   G ++T G  
Sbjct: 465 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCG-- 522

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISC--GLWHTAVVTSAGHLFTFGDGSFG 381
              SG  G+G+     I       L GI +S ++   G  H   V S G +F++G    G
Sbjct: 523 LNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRG 582

Query: 382 ALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG G  IS S  PR +++LR       +   +H +AVV             +S G+L T
Sbjct: 583 QLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVV-------------SSNGELLT 629

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           +G  D G+LG    + +  P+ V  L  + + + ACG   +VA T+ G VY+ G   YGQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689

Query: 501 LGVPVADGL-VPTRVDGEIAES--FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           LG+  A  +  P  V   + ES   +  V+CG YH   ++   K+ TWG+   GQLG G 
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           K+++NS   V      ++K   CG   + I+
Sbjct: 750 KEHKNSAQFVPLPMSSKIKNASCGCYHSLIL 780



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 144/326 (44%), Gaps = 28/326 (8%)

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV 284
           +F  +     P    S +A+ +   A G  H + V   G +FSWG    G+LG G     
Sbjct: 533 TFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISK 592

Query: 285 SH-PQLIEIL-SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           SH P++I+ L    ++   A   +H+  V+ +G+L T+G    + G LG         P+
Sbjct: 593 SHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFG--MNDCGQLGLDHTQHQHTPQ 650

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
            V   L    ++  +CGL+HT   TS G +++FG   +G LG G   +   P  V+T  G
Sbjct: 651 VVDA-LSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLG 709

Query: 403 L---RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
               +   VSCG +HT  +              +  GKL TWG  D G+LG G KE +  
Sbjct: 710 ESDEKIVAVSCGYYHTVTI--------------SEKGKLITWGRNDYGQLGIGSKEHKNS 755

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRV 514
            + V   +   I   +CG   S+ L ++G V   G    GQLG     +  AD  +P   
Sbjct: 756 AQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPS 815

Query: 515 DGEIAESFVEEVACGAYHVAALTSTS 540
           +  +A   V  +A G Y    LT  S
Sbjct: 816 N-SLANDEVVRIAAGFYSSYILTGRS 840



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 26/289 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG     G LG G         R  D+L  K   +T A+  H       H+ +V+
Sbjct: 571 GAVFSWGYN-DRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH-------HSAVVS 622

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             GE+ ++G    G+LG         PQ+++ LS   V   ACG YHT A T  G++Y++
Sbjct: 623 SNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSF 682

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G   Y    LGH   +      K S       +  +SCG +HT  ++  G L T+G   +
Sbjct: 683 GKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDY 742

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G     +  + V      +    SCG +H+  ++              S G++  
Sbjct: 743 GQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILM--------------SNGRVMV 788

Query: 441 WGDGDKGRLGHGDK----EPRLFPECVAPLIDENICQVACGHDLSVALT 485
           +G  +KG+LG G +         P     L ++ + ++A G   S  LT
Sbjct: 789 FGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 837


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 185/441 (41%), Gaps = 87/441 (19%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG+ I NG LG              D+ +P  V  T   DV  I+CG  H  ++ 
Sbjct: 379 GTVWTWGKNI-NGILG---------LGTALDSQIPSVVSGTG--DVEVISCGKTHMAIIK 426

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +++WG    G+LG+G    ++ P  I  +S  N+  ++CG  H  A+  +  L+ W
Sbjct: 427 SDGTLWTWGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAW 484

Query: 321 GDGTY-----NSGLLGH-GSKVSC------------------------------WI---P 341
           G+  Y     + GL    GS   C                              WI    
Sbjct: 485 GNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAK 544

Query: 342 RKVSGNLDGIHLSY----------ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD---H 388
             V+G+   ++L Y          +S G  H   +   G++++ G+  +G LG G    H
Sbjct: 545 NTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHH 604

Query: 389 ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
            S S    +   +GL               +VA  + S       + G ++TWG    G 
Sbjct: 605 NSYSETFNLTKAKGLTN-------------IVAVAAGSEHSVALKNDGTVWTWGSNQFGE 651

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVAD 507
           L HG+    L P     L  ENIC ++ G++ ++AL   G V+  G   YGQLG      
Sbjct: 652 LAHGNDTFSLEPMQAEGL--ENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYK 709

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             VP +VDG   E+ V+ +A G     A+T    V+ WGK   GQLG G   NR +P  +
Sbjct: 710 TNVPVQVDG--LENIVKIIA-GRDSSFAITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKI 766

Query: 568 DFLKDKQVKRVVCGLNFTAII 588
           D    K  K +V G++FT ++
Sbjct: 767 DAF--KGCKSIVSGMDFTMVL 785



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 161/343 (46%), Gaps = 34/343 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYH 307
           +ACG  H + + K G +++WG  S G+LG G   ++   P+ IE L   +V  VA G  H
Sbjct: 114 VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRH 171

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           + A+ + G ++ WG   Y  G LG  S +    P +V G L G+    I  G + +  + 
Sbjct: 172 SLALKKDGTVWAWGYNYY--GQLGDESNIRRNTPVQVKG-LTGVK--DIDAGDFFSVALR 226

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G ++ +G    G +G G  I++++P  ++T+     T++S G  H    V+A D   +
Sbjct: 227 DDGTVWGWGYNYKGQIGCGTGINSNVP--LQTVGVSNITQISAGDEH----VLALDKDKN 280

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTT 486
                     ++ WG GDKG+LG+G     L  PE ++   +  +  V  G  +S A+  
Sbjct: 281 ----------VWGWGAGDKGQLGNGTAASFLRIPEKLSSFTE--VKSVKAGTMVSAAIKE 328

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
            G ++  G   YG +G        P  R D     S ++ V    Y  AAL +   V+TW
Sbjct: 329 DGTLWIWGDNTYGIMGNSRNINSSPVQRKD----ISGIKAVELNQYCAAALKNDGTVWTW 384

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GK  NG LG G   +   P++V    D +V  + CG    AII
Sbjct: 385 GKNINGILGLGTALDSQIPSVVSGTGDVEV--ISCGKTHMAII 425



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL--VPTRVDGEIAESFVEEV 526
           E   QVACG   ++AL   G V+T G  +YGQLG+  A  +  +P +++G   E  + +V
Sbjct: 109 EGFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEG--LEDVI-KV 165

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           A G+ H  AL     V+ WG    GQLG      RN+P  V  L
Sbjct: 166 AAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGL 209



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK-DNRNSPTLVDFLKDKQVKRV 578
           E FV+ VACG YH  AL     V+TWG  + GQLG G+  +    P  ++ L+D  V +V
Sbjct: 109 EGFVQ-VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLED--VIKV 165

Query: 579 VCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAA 638
             G   +  + L K     D +V +  +N +G      N      V  K  +  K + A 
Sbjct: 166 AAGSRHS--LALKK-----DGTVWAWGYNYYGQLGDESNIRRNTPVQVKGLTGVKDIDAG 218


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVT---VGKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEK-VVY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 404


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 29/335 (8%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            I+CG  H+ L T  G+++ WG+  GGRLG G+E  V  P L  +    ++  +A G  H
Sbjct: 36  GISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLH 94

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           + A+T  GD++TWG G +  G LGH       +PR+V  + D   +S I+    HTA +T
Sbjct: 95  SVALTHQGDVFTWGYGGF--GALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAIT 151

Query: 368 SAGHLFTFG-------DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            +G L+ +G        G     G  +    S+P +V+ L  +    VSCG + T A+  
Sbjct: 152 ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMAL-- 208

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       T  G+L+ WG      LG GD      P  V  L    I Q+ACG   
Sbjct: 209 ------------TKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYH 256

Query: 481 SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           S+ALT  G V + G   +GQLG   + +  VPT ++  +A+  +  +A G    AA+T  
Sbjct: 257 SLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITDG 315

Query: 540 SKVYTWGKGANGQLG-HGDKDNRNSPTLVDFLKDK 573
            +++ WG   + QLG  G  + + +P  V+FL ++
Sbjct: 316 GELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEE 350



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 170/391 (43%), Gaps = 40/391 (10%)

Query: 156 PSPLTNAFPDNSNDRSSAAETFRISL--SSVVSSSSHGSAHEDFDSLGDVFIWGEGIANG 213
           PSP+ N    +    S A    RI    SS     S G  H      GD++IWG+G    
Sbjct: 3   PSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGG- 61

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
                  R+G  F ++    +P          +  IA G  H+V +T QG++F+WG    
Sbjct: 62  -------RLG--FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGF 112

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG-------DGTYN 326
           G LGH        P+ ++      +  +A    HT A+T SG+LY WG        G   
Sbjct: 113 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 327 SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG 386
                 G  +S  +P KV      + ++ +SCG + T  +T  G L+ +G  S   LG G
Sbjct: 173 GRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 228

Query: 387 DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK 446
           D++    P  V +L G+R T+++CG +H+ A+              T  GK+ +WG G  
Sbjct: 229 DNLGGWEPMPVPSLEGVRITQIACGGYHSLAL--------------TEEGKVLSWGHGGH 274

Query: 447 GRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA 506
           G+LG      +  P  +  L D+ I  +A G   S A+T  G ++  G+A   QLGVP  
Sbjct: 275 GQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGL 334

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
             +  T V+        EE  C  + V +++
Sbjct: 335 PEIQTTPVE---VNFLTEEDECQPHKVISIS 362



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 44/304 (14%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY----I 356
           ++CG +H+  +T  GDL+ WG G  + G LG G + S ++P     NL+ +   +    I
Sbjct: 37  ISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-----NLNPLFEEHSIRCI 88

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           + G  H+  +T  G +FT+G G FGALGH  +    +PR V+     + + ++    HTA
Sbjct: 89  ALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTA 148

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWG--DGDKGRL---------GHGDKEPRLFPECVAP 465
           A+              T  G+L+ WG  +GD             G G   P        P
Sbjct: 149 AI--------------TESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP 194

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVE 524
                +  V+CG   ++ALT  G ++  G+ +  +LG      G  P  V   +    + 
Sbjct: 195 -----VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVP-SLEGVRIT 248

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
           ++ACG YH  ALT   KV +WG G +GQLG     N+  PT ++ L DK++  +  G + 
Sbjct: 249 QIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSS 308

Query: 585 TAII 588
           +A I
Sbjct: 309 SAAI 312


>gi|389583915|dbj|GAB66649.1| hypothetical protein PCYB_094330, partial [Plasmodium cynomolgi
           strain B]
          Length = 371

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 176/372 (47%), Gaps = 43/372 (11%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI--- 290
           +P+ V +     +  ++ G  HA  +   G+IF++G    G+LG   E +    +     
Sbjct: 7   MPEKVPNFENAKIEKLSAGCNHAAFIV-DGKIFTYGLNDKGQLGRSIEEENDQNKNYTLT 65

Query: 291 --EILSGVNVEL--VACGEYHTCAVTRSGDLYTWG-DGTYNSGL--LGHGSKVSCWIPRK 343
             E+++  NV+   V CG  HT AV  + +LY+WG  G +  G   LGHG+K +   P+K
Sbjct: 66  PKEVITEGNVKFKDVCCGFKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKK 125

Query: 344 V-SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL-- 400
           V S   D      I CG  H+ V+T  G ++  G G FG LG G+H       E++    
Sbjct: 126 VESFKSDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLFFEEIDFFIS 185

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
             +    +SCG  H+ +  ++TD            G+++ WG  D G+LG  +    L+ 
Sbjct: 186 NNITVKGISCG--HSFSAALSTD------------GEVYVWGRNDYGQLGIENSIGDLYS 231

Query: 461 ECVAP-------LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
             V P       + +  I  +ACG +  +A + +  ++  GS A+ +   P A  L P  
Sbjct: 232 HEVYPNKVKYFDMENIKIKFIACGDNHMIACSENNVIFFWGSRAWLE---PKAITLSPLY 288

Query: 514 VDGEIAESFVEEVACGA--YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVD--F 569
            +  I ++ ++++  G   Y+ + L S +K+Y+WGK  +  L   DK N N PTLVD   
Sbjct: 289 QNSIIKKN-IDKIQAGGNTYYYSMLISDNKLYSWGKYNSSCLALSDKKNHNEPTLVDSKL 347

Query: 570 LKDKQVKRVVCG 581
             D+ V  + CG
Sbjct: 348 FNDEIVCDISCG 359



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 68/361 (18%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD-----ALLPKAVE 239
           +   S G  H  F   G +F +G           + ++G S   + D      L PK V 
Sbjct: 19  IEKLSAGCNHAAFIVDGKIFTYGLN--------DKGQLGRSIEEENDQNKNYTLTPKEVI 70

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWG-----EESGGRLGHGREADVSHPQLIEILS 294
           +   +   ++ CG +H V V     ++SWG      +    LGHG + ++S P+ +E   
Sbjct: 71  TEGNVKFKDVCCGFKHTVAVDVNNNLYSWGWGGNFFKGANGLGHGNKQNLSTPKKVESFK 130

Query: 295 GVNVELV--ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL-DGI 351
             + E V   CG+ H+  +T++G +Y  G G +  G LG G+        ++   + + I
Sbjct: 131 SDDSEFVNICCGDQHSLVLTKNGKVYGCGRGEF--GRLGKGNHGDQLFFEEIDFFISNNI 188

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG----HGDHISTSI-PREVE--TLRGLR 404
            +  ISCG   +A +++ G ++ +G   +G LG     GD  S  + P +V+   +  ++
Sbjct: 189 TVKGISCGHSFSAALSTDGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIK 248

Query: 405 TTRVSCGVWHTAAV-----------------------------VVATDSSSSSPSGST-- 433
              ++CG  H  A                              ++  +       G+T  
Sbjct: 249 IKFIACGDNHMIACSENNVIFFWGSRAWLEPKAITLSPLYQNSIIKKNIDKIQAGGNTYY 308

Query: 434 -----SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI--DENICQVACGHDLSVALTT 486
                S  KL++WG  +   L   DK+    P  V   +  DE +C ++CG    +A T 
Sbjct: 309 YSMLISDNKLYSWGKYNSSCLALSDKKNHNEPTLVDSKLFNDEIVCDISCGRGRVLAKTL 368

Query: 487 S 487
           +
Sbjct: 369 A 369


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 170/357 (47%), Gaps = 54/357 (15%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
            I+CG  H  L+TK G +F +G  + G+LG G +  V+ P  ++ L    V L ACG  H
Sbjct: 30  QISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNH 89

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH-LSYISCGLWHTAVV 366
           T   T  G +++   G  + G LG G        R++   LD +  +  ++ G   +A +
Sbjct: 90  TLICTGEGRVFS--SGGNSEGQLGLGDCEERTTFRRIHA-LDSLGPIKMLAAGSNTSAAL 146

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           T +G LF +GD + G +G G       P+EV    G   + VSCG +H+A V        
Sbjct: 147 TESGKLFMWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSWVSCGYYHSALV-------- 196

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKE-PR-LFPECVAPLIDENICQVACGHDLSVAL 484
                 T+ G L+T+G+ D G+LG   ++ PR   P+ V   I E + QVACG   +VAL
Sbjct: 197 ------TAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRS-IGEPVRQVACGGGHTVAL 249

Query: 485 TTSG-------------------------HVYTMGSAAYGQL--GVPVADGLVPTRVDGE 517
           T  G                          ++T G   +GQL  G  V +  +P  V+  
Sbjct: 250 TGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVE-H 308

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVD-FLK 571
             +  V +VACG  H A +T    +YT+G G +G+LG GD++  N+  PTL   FLK
Sbjct: 309 FKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLK 365



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 149/290 (51%), Gaps = 33/290 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V++  +  V   ACG  H ++ T +G +FS G  S G+LG G   + +  + I  L 
Sbjct: 69  PTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALD 128

Query: 295 GVN-VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            +  ++++A G   + A+T SG L+ WGD T   G +G G +     P++VS    G  +
Sbjct: 129 SLGPIKMLAAGSNTSAALTESGKLFMWGDNT--EGQIGLGKESHAPWPQEVS---VGAPV 183

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS------IPREVETLRGLRTTR 407
           S++SCG +H+A+VT+AG L+TFG+   G LG    ++T       +P+ V ++ G    +
Sbjct: 184 SWVSCGYYHSALVTAAGALYTFGERDSGKLG----LTTEQLPRHRVPQPVRSI-GEPVRQ 238

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGS------------TSCGKLFTWGDGDKGRLGHGD-- 453
           V+CG  HT A +    S+   P  +             S  +LFT+G G  G+LGHG   
Sbjct: 239 VACGGGHTVA-LTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFV 297

Query: 454 KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
            E RL P  V       + QVACG + S  +T  G +YT G   +G+LG+
Sbjct: 298 FESRL-PRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGL 346



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 148/319 (46%), Gaps = 53/319 (16%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  +T++G L+ +G  + N G LG GSKV+   P  V   L    +   +CG 
Sbjct: 31  ISCGDEHTALITKNGRLFMFG--SNNWGQLGLGSKVTVNKPTCVKA-LKSEKVLLAACGR 87

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            HT + T  G +F+ G  S G LG GD    +  R +  L  L   ++     +T+A + 
Sbjct: 88  NHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAAL- 146

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                       T  GKLF WGD  +G++G G +    +P+ V+  +   +  V+CG+  
Sbjct: 147 ------------TESGKLFMWGDNTEGQIGLGKESHAPWPQEVS--VGAPVSWVSCGYYH 192

Query: 481 SVALTTSGHVYTMGSAAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           S  +T +G +YT G    G+LG+     P      P R  GE     V +VACG  H  A
Sbjct: 193 SALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEP----VRQVACGGGHTVA 248

Query: 536 LT-------------------------STSKVYTWGKGANGQLGHGDKDNRNS-PTLVDF 569
           LT                         S  +++T+G G  GQLGHG     +  P LV+ 
Sbjct: 249 LTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEH 308

Query: 570 LKDKQVKRVVCGLNFTAII 588
            K  +V++V CG N +A+I
Sbjct: 309 FKKGRVRQVACGENHSAVI 327



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           +G V+T G + +       AD  +P++    +      +++CG  H A +T   +++ +G
Sbjct: 2   TGAVFTFGKSKF-------ADN-IPSKF--WLKNDVPSQISCGDEHTALITKNGRLFMFG 51

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
               GQLG G K   N PT V  LK ++V    CG N T +IC
Sbjct: 52  SNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHT-LIC 93


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 162/358 (45%), Gaps = 25/358 (6%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH-GREADVSHP 287
           Q  A  P  +E      V  ++    H+  V + GE+ + G+ S    GH      +  P
Sbjct: 150 QCVAFTP--IEFPFPAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRP 207

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           +L+E+L G   + VA G + T  ++R G  YT G  T+  G LGHG  +    P+ V   
Sbjct: 208 KLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTMDRPAPKVVEFL 265

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRT 405
            +   +  I+ G  +   VT  G +++FG GS   LGHG+      PR ++  +  G+  
Sbjct: 266 KNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
            RVS G  H     VA DS+          G+++TWG G  G LGHGD+  ++ P+ +  
Sbjct: 326 LRVSAGDEHA----VALDSN----------GRVYTWGKGYCGALGHGDENDKITPQVLVN 371

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESF 522
           L +    QV      +  L   G +Y  G   +G LG P   V+D ++  RV   +    
Sbjct: 372 LKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHR 431

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
           V +V+ G YH   +T   +++ +G     QLGH        PT + FL   + +  +C
Sbjct: 432 VSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEI-FLHCGRSRSRLC 488



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 131/281 (46%), Gaps = 31/281 (11%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +A G+YHT  +  S     +  G   SG+L HG + +  +            ++ +S   
Sbjct: 116 IATGKYHTLLINNS---KVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQ 172

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAV 418
            H+A V  +G + T GD S    GH D  S  I  P+ VE L+G    +V+ G+  T  V
Sbjct: 173 NHSAFVLQSGEVLTCGDNSSHCCGHLD-TSRPIFRPKLVEVLKGTPCKQVAAGLHFT--V 229

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACG 477
            ++ +            G  +T G    G+LGHGD   R  P+ V  L +   + Q+A G
Sbjct: 230 FLSRE------------GHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAG 277

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF------VEEVACGAY 531
               +A+T  G VY+ GS +   LG     G     +   + ++F      +  V+ G  
Sbjct: 278 PSYVLAVTQDGSVYSFGSGSNFCLG----HGEQQDELQPRVIQAFKRKGIHILRVSAGDE 333

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           H  AL S  +VYTWGKG  G LGHGD++++ +P ++  LK+
Sbjct: 334 HAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKN 374



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 16/222 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I+ G +HT ++ ++  +++ G    G L HG           ET + +  T +       
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGP----------ETTQCVAFTPIEFPFPAQ 164

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQV 474
            A V AT + S+    S   G++ T GD      GH D    +F P+ V  L      QV
Sbjct: 165 VAQVSATQNHSAFVLQS---GEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQV 221

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G   +V L+  GH YT GS  +GQLG     D   P  V+       V ++A G  +V
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYV 281

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
            A+T    VY++G G+N  LGHG++ +   P ++   K K +
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS G V+ WG+G   G LG G+         + D + P+ + +        +    R  
Sbjct: 338 LDSNGRVYTWGKGYC-GALGHGD---------ENDKITPQVLVNLKNCLAVQVCARKRKT 387

Query: 257 VLVTKQGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
            ++ + G ++ +G    G LG    G    V  P+++E L    V  V+ G YHT  VT+
Sbjct: 388 FVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ 447

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            G ++ +GD       LGH S   C  P ++
Sbjct: 448 GGRIFGFGDN--ERAQLGHNSLRGCLEPTEI 476


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 30/308 (9%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKG 548
           +V ++G G
Sbjct: 308 QVVSFGHG 315



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 18/267 (6%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG GE +   SF+     
Sbjct: 71  ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIGEFK-EISFT----- 118

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             PK + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E    + PQ + 
Sbjct: 119 --PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDG 350
            L G+ +  VA G  H+ A++  G  + WG  +     L G    V    P  V G L  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + + YISCG  HTAV+T  G +FTFGD   G LG+        P+ VE + GL  +++ C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +HT A V  T    S   G +   K
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHGPSDTSK 321



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 151/323 (46%), Gaps = 37/323 (11%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           F WG +S   L   R A     +L++          A GE H+  +  +  + + GD + 
Sbjct: 3   FCWGTDSR-ELQRRRTAGSPGAELLQ---------AASGERHSLLLLTNHRVLSCGDNS- 51

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G LG        +P  +   L+ + +  +SCG  H+  V   G +F +G GS G LG 
Sbjct: 52  -RGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 386 GDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           G+    S  P+++ TL G++  +VSCG +H+ A+  + DS            ++F+WG  
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL--SKDS------------QVFSWGKN 155

Query: 445 DKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG- 502
             G+LG G + P +  P+ V  L    + QVA G   S AL+  G  +  GS + GQL  
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215

Query: 503 ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
               VPV     P  V G +    V  ++CG  H A LT   KV+T+G   +GQLG+   
Sbjct: 216 SGRNVPVQSN-KPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT 273

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
             +  P LV+ + D  V ++ CG
Sbjct: 274 PEKRGPQLVERI-DGLVSQIDCG 295



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 11/140 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P +V +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + 
Sbjct: 227 PLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGN 347
           G+ V  + CG YHT A V  +G + ++G G  ++    H         +SC I    + +
Sbjct: 287 GL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLIS---AED 342

Query: 348 LDGIHLSYISCGLWHTAVVT 367
           L  +H+ +I  G +   V T
Sbjct: 343 LVDVHVKHIFAGTYANFVTT 362


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 30/308 (9%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKG 548
           +V ++G G
Sbjct: 308 QVVSFGHG 315



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 18/267 (6%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG GE +   SF+     
Sbjct: 71  ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIGEFK-EISFT----- 118

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             PK + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E    + PQ + 
Sbjct: 119 --PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDG 350
            L G+ +  VA G  H+ A++  G  + WG  +     L G    V    P  V G L  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + + YISCG  HTAV+T  G +FTFGD   G LG+        P+ VE + GL  +++ C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +HT A V  T    S   G +   K
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHGPSDTSK 321



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 151/323 (46%), Gaps = 37/323 (11%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           F WG +S   L   R A     +L++          A GE H+  +  +  + + GD + 
Sbjct: 3   FCWGTDSR-ELQRRRTAGSPGAELLQ---------AASGERHSLLLLTNHRVLSCGDNS- 51

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G LG        +P  +   L+ + +  +SCG  H+  V   G +F +G GS G LG 
Sbjct: 52  -RGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 386 GDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           G+    S  P+++ TL G++  +VSCG +H+ A+  + DS            ++F+WG  
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL--SKDS------------QVFSWGKN 155

Query: 445 DKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG- 502
             G+LG G + P +  P+ V  L    + QVA G   S AL+  G  +  GS + GQL  
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215

Query: 503 ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
               VPV     P  V G +    V  ++CG  H A LT   KV+T+G   +GQLG+   
Sbjct: 216 SGRNVPVQSN-KPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT 273

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
             +  P LV+ + D  V ++ CG
Sbjct: 274 PEKRGPQLVERI-DGLVSQIDCG 295



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 11/140 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P +V +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + 
Sbjct: 227 PLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGN 347
           G+ V  + CG YHT A V  +G + ++G G  ++    H         +SC I    + +
Sbjct: 287 GL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLIS---AED 342

Query: 348 LDGIHLSYISCGLWHTAVVT 367
           L  +H+ +I  G +   V T
Sbjct: 343 LVDVHVKHIFAGTYANFVTT 362


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 38/374 (10%)

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
           +S+   +  L  +  E +   ++   A G RHA+L+     + S GE S G+LG      
Sbjct: 3   FSWGAGSRGLQRRRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPR 62

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPR 342
              P+ ++ L  +   LV+CG+ H+ AV   G ++ WG G+   G LG G  K   + P+
Sbjct: 63  GDLPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGS--EGQLGIGEFKEINFTPK 120

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLR 401
           K++  L GI +  +SCG +H+  ++    +F++G  S G LG G  +S+   P+ V +L 
Sbjct: 121 KIT-TLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLE 179

Query: 402 GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL--- 458
           G+   +V+ G  H+ A+ +              CG  F WG    G+L    +  ++   
Sbjct: 180 GIPVAQVAAGGAHSFALSL--------------CGTSFGWGSNSAGQLALSGRNVQVQSN 225

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG---VPVADG-LVPTRV 514
            P  +  L +  +  ++CG + +  L+  G V+T G  + GQLG    P   G  +  R+
Sbjct: 226 KPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERI 285

Query: 515 DGEIAESFVEEVACGAYH-VAALTSTSKVYTWGKGAN--GQLGHGD--KDNRNSPTLV-- 567
           DG      V ++ CG  H +A + +T +V ++G G +   +  H +  K+N +   L+  
Sbjct: 286 DG-----LVSQIDCGGDHTIAYVHTTGQVVSFGHGPSDTSKPTHPEALKENFDIRCLISA 340

Query: 568 DFLKDKQVKRVVCG 581
           D L D QVK +  G
Sbjct: 341 DDLVDVQVKHIFAG 354


>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 36/333 (10%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G +F WG   +NG LG   + VG S  +     +P+ V+     +V  +  G  H+ L
Sbjct: 11  STGSLFTWGS--SNGSLG---YAVG-SQQQMKGVSMPQLVKG-FNNNVAQVQMGQNHSAL 63

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--VACGEYHTCAVTRSGD 316
           +T +GE+++WG  + G+LGH  + D   PQL+E  +  N+++  VA G+YHT A+T  GD
Sbjct: 64  ITSEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGD 123

Query: 317 LYTWGDG-----------TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
           ++TWG G               G LGHG+  + + P  V        + YI  GL  T  
Sbjct: 124 VWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQSGLRFTNA 183

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +     L+ +G G +G  G G++ S +IP+  E   G    + +         +V   S 
Sbjct: 184 INENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLS-------IVKLKSC 236

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDK------EPRLFPECVA--PLIDENICQVACG 477
           ++      S G L+ WG  D G++G   +      E   FP  V      D  I      
Sbjct: 237 NNYSVALMSDGNLYGWGSNDFGQIGVKIEIGVEIYETANFPTQVLKDKFGDNKIVDFVVA 296

Query: 478 HDLSVALTTSGHVYTMGSAA-YGQLGVPVADGL 509
            DL   L  +  VY  GS A Y     P+ DG+
Sbjct: 297 EDLVAVLLDNNEVYWSGSKAEYSPARFPLPDGI 329



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 40/233 (17%)

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI----DENICQVACGHDLSVALTTSGH 489
           S G LFTWG  + G LG+     +       P +    + N+ QV  G + S  +T+ G 
Sbjct: 11  STGSLFTWGSSN-GSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITSEGE 69

Query: 490 VYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGK 547
           +YT G+   GQLG     D + P  V+     +  V++VA G YH  ALT    V+TWG 
Sbjct: 70  LYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWTWGY 129

Query: 548 GAN-------------GQLGHGDKDNRNSPTLVDFLKD-KQVKRVVCGLNFTAIIC---- 589
           G               G LGHG+  NR +PT V  L+  K++K +  GL FT  I     
Sbjct: 130 GGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQSGLRFTNAINENNE 189

Query: 590 LHKWVSSVDHSVCSSCHNPF-----------GFRRKRHNCYNCGLVFCKACSS 631
           L+ W    D+ V    +N             G+ +K+    N  +V  K+C++
Sbjct: 190 LYVW-GKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQ---NLSIVKLKSCNN 238



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 130/295 (44%), Gaps = 57/295 (19%)

Query: 314 SGDLYTWGDGTYNSGLLGH--GSKVS---CWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           +G L+TWG    ++G LG+  GS+       +P+ V G  +  +++ +  G  H+A++TS
Sbjct: 12  TGSLFTWGS---SNGSLGYAVGSQQQMKGVSMPQLVKGFNN--NVAQVQMGQNHSALITS 66

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVE--TLRGLRTTRVSCGVWHTAAVVVATDSSS 426
            G L+T+G G+ G LGH +      P+ VE  T   L+  +V+ G +HT A+        
Sbjct: 67  EGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVAL-------- 118

Query: 427 SSPSGSTSCGKLFTWGDGDK-------------GRLGHGDKEPRLFPECVAPLID-ENIC 472
                 T  G ++TWG G K             G LGHG+ + R  P  V  L   + I 
Sbjct: 119 ------THDGDVWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIK 172

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLG--------VPVADGLVPTRVDGEIAESFVE 524
            +  G   + A+  +  +Y  G   YG  G        +P  +      +  +   S V+
Sbjct: 173 YIQSGLRFTNAINENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIVK 232

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK------DNRNSPTLVDFLKDK 573
             +C  Y VA L S   +Y WG    GQ+G   +      +  N PT V  LKDK
Sbjct: 233 LKSCNNYSVA-LMSDGNLYGWGSNDFGQIGVKIEIGVEIYETANFPTQV--LKDK 284



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 39/236 (16%)

Query: 368 SAGHLFTFG--DGSFG-ALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           S G LFT+G  +GS G A+G    +   S+P+ V+        +V  G  H+A +     
Sbjct: 11  STGSLFTWGSSNGSLGYAVGSQQQMKGVSMPQLVKGFNN-NVAQVQMGQNHSALI----- 64

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN--ICQVACGHDLS 481
                    TS G+L+TWG G+ G+LGH + +  + P+ V      N  + QVA G   +
Sbjct: 65  ---------TSEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHT 115

Query: 482 VALTTSGHVYTMGSAAYGQ------LGVPVA--------DGLVPTRVDGEIAESFVEEVA 527
           VALT  G V+T G     Q      L + V         +   PT V    +   ++ + 
Sbjct: 116 VALTHDGDVWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQ 175

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF----LKDKQVKRVV 579
            G     A+   +++Y WGKG  G  G G+  + N P   +F    LK KQ   +V
Sbjct: 176 SGLRFTNAINENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIV 231



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 11/106 (10%)

Query: 484 LTTSGHVYTMGSAAYGQLGVPVA-----DGL-VPTRVDGEIAESFVEEVACGAYHVAALT 537
           L ++G ++T GS+  G LG  V       G+ +P  V G    + V +V  G  H A +T
Sbjct: 9   LFSTGSLFTWGSSN-GSLGYAVGSQQQMKGVSMPQLVKG--FNNNVAQVQMGQNHSALIT 65

Query: 538 STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL--KDKQVKRVVCG 581
           S  ++YTWG G +GQLGH +  +  +P LV+F    + +VK+V  G
Sbjct: 66  SEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALG 111


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 30/308 (9%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKG 548
           +V ++G G
Sbjct: 308 QVVSFGHG 315



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 18/267 (6%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG GE +   SF+     
Sbjct: 71  ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIGEFK-EISFT----- 118

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             PK + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E    + PQ + 
Sbjct: 119 --PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDG 350
            L G+ +  VA G  H+ A++  G  + WG  +     L G    V    P  V G L  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + + YISCG  HTAV+T  G +FTFGD   G LG+        P+ VE + GL  +++ C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +HT A V  T    S   G +   K
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHGPSDTSK 321



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 151/323 (46%), Gaps = 37/323 (11%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           F WG +S   L   R A     +L++          A GE H+  +  +  + + GD + 
Sbjct: 3   FCWGTDSR-ELQRRRTAGSPGAELLQ---------AASGERHSLLLLTNHRVLSCGDNS- 51

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G LG        +P  +   L+ + +  +SCG  H+  V   G +F +G GS G LG 
Sbjct: 52  -RGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 386 GDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           G+    S  P+++ TL G++  +VSCG +H+ A+  + DS            ++F+WG  
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL--SKDS------------QVFSWGKN 155

Query: 445 DKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG- 502
             G+LG G + P +  P+ V  L    + QVA G   S AL+  G  +  GS + GQL  
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLAL 215

Query: 503 ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
               VPV     P  V G +    V  ++CG  H A LT   KV+T+G   +GQLG+   
Sbjct: 216 SGRNVPVQSN-KPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT 273

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
             +  P LV+ + D  V ++ CG
Sbjct: 274 PEKRGPQLVERI-DGLVSQIDCG 295



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 11/140 (7%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P +V +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + 
Sbjct: 227 PLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286

Query: 295 GVNVELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGN 347
           G+ V  + CG YHT A V  +G + ++G G  ++    H         +SC I    + +
Sbjct: 287 GL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLIS---AED 342

Query: 348 LDGIHLSYISCGLWHTAVVT 367
           L  +H+ +I  G +   V T
Sbjct: 343 LVDVHVKHIFAGTYANFVTT 362


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 37/362 (10%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K++  L+GI +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLG-HGDKEPRLF--PECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L   G   P     P  +  L +  +  ++CG + +  LT
Sbjct: 199 ------CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKGAN--GQLGHGDK--DNRNSPTLV--DFLKDKQVKRVVCGLNFTAIICLHKWV 594
           +V ++G G +   +  H +   +N +   L+  + L D QVK +  G  +   +  H+  
Sbjct: 308 QVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAG-TYANFVTTHQDT 366

Query: 595 SS 596
           SS
Sbjct: 367 SS 368



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 131/267 (49%), Gaps = 18/267 (6%)

Query: 173 AAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDA 232
           A ET  + L S     S    H+     G VF WG G + G LG GE +   SF+     
Sbjct: 71  ALETLIVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLGIGEFK-EISFT----- 118

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIE 291
             PK + +   + +  ++CG  H++ ++K  ++FSWG+ S G+LG G+E    + PQ + 
Sbjct: 119 --PKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDG 350
            L G+ +  VA G  H+ A++  G  + WG  +     L  G  V     + +S G L  
Sbjct: 177 SLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALS-GRNVPAQSNKPLSIGALKN 235

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
           + + YISCG  HTAV+T  G +FTFGD   G LG+        P+ VE + GL  +++ C
Sbjct: 236 LGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G +HT A V  T    S   G +   K
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHGPSDTSK 321



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+G+ +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G      ++ P  +  L+ L    +S
Sbjct: 183 LAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDEHTAVL--------------TQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L    I QV+CGH  S+AL+    V++ G  ++GQLG+       
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEF 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQL---GHGDKDNRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL   G       N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  +  LK+  V  + CG   TA++
Sbjct: 227 PLSIGALKNLGVVYISCGDEHTAVL 251



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P ++
Sbjct: 181 IPLAQVAAGGTHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPAQSNK--PLSI 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  ++    H        P  ++ N D      IS
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTH--------PEALTENFD------IS 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +    +V     H+F     +F    H D  ST  P
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANF-VTTHQDTSSTHAP 372


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 162/357 (45%), Gaps = 29/357 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC 303
           D+  +  G     ++T +G + + G    G+ G G  +  V   + ++ L    V+ +A 
Sbjct: 362 DIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 421

Query: 304 --GEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
             G  H  A+T +G  Y+WG   YN  G LGH +  +     K+  +L    L + S   
Sbjct: 422 SNGCEHMIALTDTGLAYSWG---YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSY 478

Query: 361 WHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
            H+AV+T AG L+TFG    G LG  H  H ST  P+ V++L     + V+CG++HT   
Sbjct: 479 HHSAVITDAGELYTFGMNDCGQLGLDHTQHQST--PQLVKSLEATEVSMVACGLYHTIIC 536

Query: 419 VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGH 478
                         T+ G+LFT G  D G+LG         P  VA L +E +  VACG+
Sbjct: 537 --------------TAAGELFTCGKNDYGQLGLAHNRQIKLPTLVA-LPNEMVSFVACGY 581

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             SV ++T G  ++ G   YGQLG+          V    + + +    CG YH   L+ 
Sbjct: 582 YHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSE 641

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR---VVCGLNFTAIICLHK 592
             +VY +G+   GQLG+    +   P  +    +K  +R   V  G   T++I   K
Sbjct: 642 QGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERK 698



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 18/227 (7%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +PK +ES     +   +    H+ ++T  GE++++G    G+LG       S PQL++ L
Sbjct: 459 VPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSL 518

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
               V +VACG YHT   T +G+L+T G   Y    L H  ++   +P  V+  L    +
Sbjct: 519 EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIK--LPTLVA--LPNEMV 574

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           S+++CG +H+ VV++ G  F+FG   +G LG G  +  ++P  V      R  R +CG +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCY 634

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           HT  +              +  G+++ +G  +KG+LG+      L P
Sbjct: 635 HTVLL--------------SEQGQVYVFGRNNKGQLGNRGSADALLP 667



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 43/263 (16%)

Query: 368 SAGHLFTFGDGSFGALGHGDHIS----TSIP-------REV----ETLRGLRTTRV---- 408
           ++G L++ G  S+G LG GD I     TS+        R+V    ETL  L    V    
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTC 385

Query: 409 ------SCGVWHTAAVV----------------VATDSSSSSPSGSTSCGKLFTWGDGDK 446
                  CG  H    V                +A  +        T  G  ++WG  D+
Sbjct: 386 GLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445

Query: 447 GRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
           G+LGH +   ++  P+ +  L D+ +   +  +  S  +T +G +YT G    GQLG+  
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDH 505

Query: 506 ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
                  ++   +  + V  VACG YH    T+  +++T GK   GQLG         PT
Sbjct: 506 TQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPT 565

Query: 566 LVDFLKDKQVKRVVCGLNFTAII 588
           LV  L ++ V  V CG   + ++
Sbjct: 566 LVA-LPNEMVSFVACGYYHSVVV 587


>gi|118357858|ref|XP_001012177.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89293944|gb|EAR91932.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1162

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 61/352 (17%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILS-GVNVELVACGEYHTCAVTRSG-------- 315
           IF+   ++ G+LG G         +  I S  V ++ ++CG+ H+  +  +G        
Sbjct: 43  IFNLLGDNEGQLGLGENKQGKKYAIPRICSFNVVIQQISCGKNHSAFIASNGYVYTMANG 102

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN----LDGIHLSYISCGLWHTAVV----- 366
           +++TWG  T   G LG G+ V+ +IP+KVS N    ++      ISCG +HT+++     
Sbjct: 103 EVFTWGKNT--DGQLGLGNYVNQYIPQKVSFNHIQTINSTIAKQISCGAYHTSILLGNYL 160

Query: 367 --------------TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
                            G + +FG    G LG G+  + S+P+  E ++ + TT +SCG 
Sbjct: 161 TQSLIQRFQKFNKQKEYGEVCSFGQNDKGQLGIGNQTNESLPKMNEFIQEI-TTMISCGY 219

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
           +++  +              T   K+   GD  +G+LG G+K  +L P  +  L  ENI 
Sbjct: 220 YYSLFL--------------TKSMKVLACGDNSEGQLGLGNKRSQLKPILINKL--ENI- 262

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           Q       S A++++G ++  G+  +G+        L P +V     +  +  V+ G   
Sbjct: 263 QTIDAKQHSAAISSNGELFLFGTCMFGEF-------LFPQKVHN--LKKQMAAVSIGDNF 313

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
             A+    ++Y+WG   NGQLG GD++ R  PT +  LK K+  ++ CG N+
Sbjct: 314 GCAIDIEGQIYSWGYNENGQLGLGDQEPRILPTPMVCLKGKKALKIQCGQNY 365



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 54/303 (17%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV- 259
           G+VF WG+   +G LG G + V     ++      + + ST+A     I+CGA H  ++ 
Sbjct: 102 GEVFTWGKN-TDGQLGLGNY-VNQYIPQKVSFNHIQTINSTIA---KQISCGAYHTSILL 156

Query: 260 ---------------TKQ---GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
                           KQ   GE+ S+G+   G+LG G + + S P++ E +  +   ++
Sbjct: 157 GNYLTQSLIQRFQKFNKQKEYGEVCSFGQNDKGQLGIGNQTNESLPKMNEFIQEITT-MI 215

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           +CG Y++  +T+S  +   GD +   G LG G+K S   P  ++  L+ I          
Sbjct: 216 SCGYYYSLFLTKSMKVLACGDNS--EGQLGLGNKRSQLKPILINK-LENIQ---TIDAKQ 269

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H+A ++S G LF FG   FG            P++V  L+  +   VS G     A+ + 
Sbjct: 270 HSAAISSNGELFLFGTCMFGEF--------LFPQKVHNLKK-QMAAVSIGDNFGCAIDIE 320

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                         G++++WG  + G+LG GD+EPR+ P  +  L  +   ++ CG +  
Sbjct: 321 --------------GQIYSWGYNENGQLGLGDQEPRILPTPMVCLKGKKALKIQCGQNYC 366

Query: 482 VAL 484
           ++L
Sbjct: 367 ISL 369


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 29/256 (11%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V +++ G   +  VTK G +++WG    G+LG G     S PQL++ L  VN+  V CG
Sbjct: 213 EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCG 272

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYISCGLWHT 363
             H CA+T  G++Y+WG G +  G LGHG+  S   P+K+   ++    ++ ++CG   T
Sbjct: 273 RQHICAITDQGEVYSWGLGVF--GQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFT 330

Query: 364 AVVTSAGHLFTFGDGSFGALG------HGD------HISTSIPREVETLRGLRTTRVSCG 411
            V +  G L+ FG G +G LG      H D      H   SIP  V++L   +   V+CG
Sbjct: 331 MVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACG 390

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI 471
             HT   +V TD +           +++ WG G  G LG G+K  +L P+ +  L  E I
Sbjct: 391 HLHT---IVVTDEN-----------EVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEI 436

Query: 472 CQVACGHDLSVALTTS 487
             +  G   ++ +  S
Sbjct: 437 ASITAGEKHTIVVRCS 452



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 189/448 (42%), Gaps = 82/448 (18%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGE------GIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           VS  +H  A   F   GDV+ WG       GI  G+  GG  +V +          P  +
Sbjct: 40  VSGEAHSLAVSRF---GDVYSWGRSKEGQLGIGQGY--GGSDKVMF-------VAKPTLI 87

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGE-----ESGGRL------GHGREADVSHP 287
           +S     +  +ACG  H++ +T  G+++ WG+     ES   L      G      +S  
Sbjct: 88  KSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQ 147

Query: 288 QLIE-----ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           ++IE      LSG      A G   T       D          S  LG    ++  IP 
Sbjct: 148 RIIEASVSQYLSGEKKAYDANG--GTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPM 205

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           ++    +   +  +S G   +A VT +G L+T+G    G LG G+    S P+ V+TL  
Sbjct: 206 QIQDIPE--EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLID 263

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
           +    V CG  H  A+              T  G++++WG G  G+LGHG+ +  L P+ 
Sbjct: 264 VNIVSVVCGRQHICAI--------------TDQGEVYSWGLGVFGQLGHGNVKSYLHPKK 309

Query: 463 VAPLID--ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG------------------ 502
           +   ++  E I QVACG + ++  +  G +Y  G   YGQLG                  
Sbjct: 310 IQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFK 369

Query: 503 --VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDN 560
             +P+    + T+         ++ VACG  H   +T  ++VY WG G++G LG G+K  
Sbjct: 370 YSIPIVVKSLETKK--------IKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRF 421

Query: 561 RNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +  P L+  L  +++  +  G   T ++
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 173/405 (42%), Gaps = 61/405 (15%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG-------READ 283
           + L P  +E  +   +     G  H++ V++ G+++SWG    G+LG G       +   
Sbjct: 21  ECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMF 80

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG------------DGTYNSGLLG 331
           V+ P LI+ L    +  VACG +H+ A+T  G +Y WG            D    +GL+ 
Sbjct: 81  VAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIE 140

Query: 332 HGSKVSC-WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIS 390
                S   I   VS  L G   +Y + G                       LG    ++
Sbjct: 141 MPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLN 200

Query: 391 TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG 450
            +IP +++ +       VS G   +AAV              T  G+L+TWG  +KG+LG
Sbjct: 201 QTIPMQIQDIPE-EVVDVSGGWAFSAAV--------------TKSGRLYTWGFNEKGQLG 245

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
            G++     P+ V  LID NI  V CG     A+T  G VY+ G   +GQLG     G V
Sbjct: 246 LGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLG----HGNV 301

Query: 511 PTRVDGEIAESFVE------EVACGAYHVAALTSTSKVYTWGKGANGQLG---------H 555
            + +  +  + FVE      +VACG+      +    +Y +G G  GQLG          
Sbjct: 302 KSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDF 361

Query: 556 GDKDNR---NSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
           G +DN    + P +V  L+ K++K V CG   T ++     +++W
Sbjct: 362 GGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQW 406



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 166/392 (42%), Gaps = 34/392 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + S G+   G+LGH    +   P +IE L G  +     GE H+ AV+R GD+Y+WG   
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62

Query: 325 YNSGLLGHG----SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---- 376
                +G G     KV       +  +L    +  ++CG +H+  +T  G ++ +G    
Sbjct: 63  EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHR 122

Query: 377 -DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            D S  +L   D  ST+   E+  L   R    S   + +        +  + P      
Sbjct: 123 LDESQSSL---DIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDED 179

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            +           LG      +  P  +   I E +  V+ G   S A+T SG +YT G 
Sbjct: 180 KEASNSAQSKSKHLGKIIDLNQTIPMQIQD-IPEEVVDVSGGWAFSAAVTKSGRLYTWGF 238

Query: 496 AAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
              GQLG+          LV T +D  I       V CG  H+ A+T   +VY+WG G  
Sbjct: 239 NEKGQLGLGNRWFHSTPQLVKTLIDVNIV-----SVVCGRQHICAITDQGEVYSWGLGVF 293

Query: 551 GQLGHGDKDNRNSPTLV-DFLK-DKQVKRVVCGLNFTAIICLHKWVSSVDH-------SV 601
           GQLGHG+  +   P  +  F++ ++++ +V CG NFT +  +   + +  H       S 
Sbjct: 294 GQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGST 353

Query: 602 CSSCHNPFGFRRKRHNCYNCGLVFCKACSSRK 633
             + H  FG  R  H  Y+  +V  K+  ++K
Sbjct: 354 EETQHLDFG-GRDNHFKYSIPIV-VKSLETKK 383


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 27/339 (7%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G ++ VS P  ++ L    V+  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T  G +Y  G    N G LG G          +S       +  +S G   +A +T 
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  +  +  +P++V    G   + +SCG +H+A V          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFV---------- 205

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTT 486
               T+ G+L+T+G+ + G+LG  ++       P+ V P I   + QVACG   +V LT 
Sbjct: 206 ----TTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPV-PGIPGKVVQVACGGGHTVVLTE 260

Query: 487 SGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
              VYT G   +GQLG+   + +  VP  ++  I +  +  +ACG  H A +T    +YT
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYT 318

Query: 545 WGKGANGQLGHGDKDNRNS--PTLVDFLKDKQVKRVVCG 581
           +G G +G+LG G +++ N   PTL        V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 35/314 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL- 293
           P  V++     V   ACG  H ++ T+ G++++ G  + G+LG G   + S   LI    
Sbjct: 78  PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFT 137

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           S   ++ ++ G   + A+T  G+L+ WGD +   G +G  +  +  +P++V+    G  +
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVT---VGKPI 192

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS--IPREVETLRGLRTTRVSCG 411
           S+ISCG +H+A VT+ G L+TFG+   G LG  + +  +  +P+ V  + G +  +V+CG
Sbjct: 193 SWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACG 251

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPLI 467
             HT   VV T+ +            ++T+G G  G+LG G     LF    P+ +  + 
Sbjct: 252 GGHT---VVLTEKA------------VYTFGLGQFGQLGLGT---FLFETSVPKAIEHIK 293

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVE 524
           D+ I  +ACG + +  +T  G +YT G   +G+LG+ + +     +PT          V+
Sbjct: 294 DQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS-NFLRFIVQ 352

Query: 525 EVACGAYHVAALTS 538
            V+CG  H     +
Sbjct: 353 LVSCGGCHTLVFAT 366



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 25/293 (8%)

Query: 300 LVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCG 359
            ++CG+ HT  VT +  LY +G    N G LG GSK +   P  V   L    + + +CG
Sbjct: 39  FLSCGDEHTAVVTGNNKLYMFGSN--NWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             HT V T  G ++  G  + G LG GD    S    +      R  +            
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIK------------ 143

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
               + S++ +  T  G+LF WGD  +G++G  +      P+ V   + + I  ++CG+ 
Sbjct: 144 -QLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYY 200

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
            S  +TT G +YT G    G+LG+P   + +  +P  V G   +  V +VACG  H   L
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVL 258

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDFLKDKQVKRVVCGLNFTAII 588
           T  + VYT+G G  GQLG G      S P  ++ +KD+++  + CG N TA+I
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 24/227 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F+WG+          E ++G      T+  +P+ V  T+   +  I+CG  H+  VT
Sbjct: 159 GELFMWGDN--------SEGQIG--LENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT 206

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +G+++++GE   G+LG   +  V+H  PQ +  + G  V+ VACG  HT  +T    +Y
Sbjct: 207 TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEKA-VY 264

Query: 319 TWGDGTYNSGLLGHGSKV-SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           T+G G +  G LG G+ +    +P+ +  ++    +S+I+CG  HTA++T  G ++TFGD
Sbjct: 265 TFGLGQF--GQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFGD 321

Query: 378 GSFGALGHGDHISTS--IPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           G  G LG G   ST+  IP             VSCG  HT  +V AT
Sbjct: 322 GRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT--LVFAT 366


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 19/218 (8%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
           + VH +  G+  A   T  GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++
Sbjct: 73  VQVHQLLAGSGGAR--TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 130

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            GE H+ A++ SG++Y+WG   +  G LG G   S   P  + G LD   + +++CG  H
Sbjct: 131 AGEAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSH 187

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A++T  G LFTFG G  G LGH    +   P  V  L   R T+++CG WHT A V   
Sbjct: 188 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYV--- 244

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                     +  GK+F++G G  G+LG+G    +L P
Sbjct: 245 ----------SDLGKVFSFGSGKDGQLGNGGTRDQLMP 272



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+ G  H++ ++
Sbjct: 90  GELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQISAGEAHSMALS 140

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+SWG+   G+LG G      +P LIE L    VE VACG  H+  +T+ G L+T+
Sbjct: 141 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 200

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G +  G LGH S  +   P  V+  L    ++ I+CG WHT A V+  G +F+FG G 
Sbjct: 201 GAGKH--GQLGHNSTQNELRPCLVA-ELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 257

Query: 380 FGALGHGDHISTSIPREVET 399
            G LG+G      +P  V+ 
Sbjct: 258 DGQLGNGGTRDQLMPLPVKV 277



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 18/213 (8%)

Query: 367 TSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           T +G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H+ A+ ++    
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS---- 142

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G +++WG  + G+LG G  E + +P  +  L ++ +  VACG   S  LT
Sbjct: 143 ----------GNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLT 192

Query: 486 TSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS-TSKVY 543
             G ++T G+  +GQLG     + L P  V  E+ E  V ++ACG +H  A  S   KV+
Sbjct: 193 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVEYRVTQIACGRWHTLAYVSDLGKVF 251

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           ++G G +GQLG+G   ++  P  V     +++K
Sbjct: 252 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 284



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 12/200 (6%)

Query: 389 ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS-TSCGKLFTWGDGDKG 447
           +  ++ R VE  R L  +     V       V      +   G+ T  G+LF WG    G
Sbjct: 42  LQRALLRRVEVTRQLCCSPGRLAVLERGGAGVQVHQLLAGSGGARTPSGELFAWGQNLHG 101

Query: 448 RLGHGDKEPRLFPECVAPLIDENIC-----QVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           +LG G K    FP    P I E++      Q++ G   S+AL+ SG++Y+ G   +GQLG
Sbjct: 102 QLGVGRK----FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLG 157

Query: 503 VPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
           +   +    P+ ++G +    VE VACG  H A LT    ++T+G G +GQLGH    N 
Sbjct: 158 LGHTESKDYPSLIEG-LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNE 216

Query: 562 NSPTLVDFLKDKQVKRVVCG 581
             P LV  L + +V ++ CG
Sbjct: 217 LRPCLVAELVEYRVTQIACG 236



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 7/110 (6%)

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTS 538
           A T SG ++  G   +GQLGV       P+    +I E      + +++ G  H  AL+ 
Sbjct: 85  ARTPSGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSM 141

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +  +Y+WGK   GQLG G  ++++ P+L++ L +++V+ V CG + +A++
Sbjct: 142 SGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 191


>gi|443710462|gb|ELU04715.1| hypothetical protein CAPTEDRAFT_111937 [Capitella teleta]
          Length = 689

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 149/345 (43%), Gaps = 52/345 (15%)

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSG-VNVELVACGEYHTCAVTRSGDLYTW 320
           Q  ++ WG   GG         +S P L+ + S   ++  V+ G     AVT++G L  W
Sbjct: 320 QSRVYCWG---GG---------ISAPHLLPLPSSDTHITEVSTGRTQKAAVTKNGRLLLW 367

Query: 321 -----GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
                G      G  G G     +IPR + G    + + ++SCG   TA +T  G L TF
Sbjct: 368 ETPSVGAEPSMPGATGAGGPA--FIPRYLEGQ-SAVTIKHVSCGDLFTACLTDRGILMTF 424

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G G+ G LGHG++   S  + VE L G   ++VSCG  H  AV    D            
Sbjct: 425 GSGANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGASHVMAVTNEHD------------ 472

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-----ICQVACGHDLSVALTTSGHV 490
             +F+WG GD GRLG G +E    P C  PL+ E      +C V C   L   ++T   +
Sbjct: 473 --VFSWGRGDNGRLGLGHQESCCSP-CRVPLMPETQPISALCGVDCSMLLVEPMST---L 526

Query: 491 YTMGSAAYGQLG-------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           +  GS  Y +L        V       P +    +A   +  VA G  H AA+ S  + Y
Sbjct: 527 FCCGSNRYNKLALDRESEHVEEVHSFCPVQ-SLPLASQAIAMVAMGTSHAAAIMSNGECY 585

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           T+G    GQLG     + N PT V  L    V  V CG  FT  I
Sbjct: 586 TFGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDTFTVAI 630



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 30/281 (10%)

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           A +P+ +E   A+ + +++CG      +T +G + ++G  + G LGHG   DVS  +++E
Sbjct: 388 AFIPRYLEGQSAVTIKHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVE 447

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI 351
            L G  V  V+CG  H  AVT   D+++WG G  ++G LG G + SC  P +V    +  
Sbjct: 448 DLLGFEVSQVSCGASHVMAVTNEHDVFSWGRG--DNGRLGLGHQESCCSPCRVPLMPETQ 505

Query: 352 HLSYISCGL-WHTAVVTSAGHLFTFGDGSFGALG------HGDHISTSIPREVETLRGLR 404
            +S + CG+     +V     LF  G   +  L       H + + +  P +   L    
Sbjct: 506 PISAL-CGVDCSMLLVEPMSTLFCCGSNRYNKLALDRESEHVEEVHSFCPVQSLPLASQA 564

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG---HGDKEPRLFPE 461
              V+ G  H AA++              S G+ +T+G    G+LG   +GD      P 
Sbjct: 565 IAMVAMGTSHAAAIM--------------SNGECYTFGSNQFGQLGIPANGDNN---MPT 607

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
            V  L    +  V+CG   +VA+   G +Y+ G AA G+LG
Sbjct: 608 RVLSLSKIAVSMVSCGDTFTVAIMKDGKIYSWGKAARGRLG 648



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 30/260 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +  +G G ANG LG G +          D    K VE  +  +V  ++CGA H + VT
Sbjct: 419 GILMTFGSG-ANGCLGHGNY---------NDVSQAKIVEDLLGFEVSQVSCGASHVMAVT 468

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG-EYHTCAVTRSGDLYT 319
            + ++FSWG    GRLG G +     P  + ++         CG +     V     L+ 
Sbjct: 469 NEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSMLLVEPMSTLFC 528

Query: 320 WGDGTYNSGLLG----HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
            G   YN   L     H  +V  + P + S  L    ++ ++ G  H A + S G  +TF
Sbjct: 529 CGSNRYNKLALDRESEHVEEVHSFCPVQ-SLPLASQAIAMVAMGTSHAAAIMSNGECYTF 587

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G   FG LG   +   ++P  V +L  +  + VSCG   T  V +  D            
Sbjct: 588 GSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCG--DTFTVAIMKD------------ 633

Query: 436 GKLFTWGDGDKGRLGHGDKE 455
           GK+++WG   +GRLG  D E
Sbjct: 634 GKIYSWGKAARGRLGRLDCE 653



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 46/242 (19%)

Query: 393 IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG-------- 444
           IP+ +    G    RVS G   T+    A+   SS+   S    +++ WG G        
Sbjct: 278 IPKSLSNYSGQNRGRVSRGSSITSKGFFASYRHSSTSKTSPLQSRVYCWGGGISAPHLLP 337

Query: 445 ----------------------DKGRL----------------GHGDKEPRLFPECVAPL 466
                                   GRL                  G   P   P  +   
Sbjct: 338 LPSSDTHITEVSTGRTQKAAVTKNGRLLLWETPSVGAEPSMPGATGAGGPAFIPRYLEGQ 397

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
               I  V+CG   +  LT  G + T GS A G LG    + +   ++  ++    V +V
Sbjct: 398 SAVTIKHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVEDLLGFEVSQV 457

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           +CGA HV A+T+   V++WG+G NG+LG G +++  SP  V  + + Q    +CG++ + 
Sbjct: 458 SCGASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSM 517

Query: 587 II 588
           ++
Sbjct: 518 LL 519


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 157/325 (48%), Gaps = 37/325 (11%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           DV  IA GA H + +   G +++WG   GG+LG G   D S P  +  L+  +V  +A G
Sbjct: 194 DVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT--DVIAIAGG 251

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
             HT A+   G ++ WGD     G LG GS  +  IP KV G  D I    I+ G  HT 
Sbjct: 252 YAHTIALKSDGTVWAWGDN--EGGRLGDGSTTNRSIPVKVGGLSDVIA---IAGGNAHTI 306

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
            + S G ++ +GD   G LG G   + S P +V  L  +    ++ G  HT  +V+ +D 
Sbjct: 307 ALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV--IAIAGGYSHT--IVLRSD- 361

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                      G ++TWG  + G+LG G    R  P  V+ L D  +  +A G   ++A+
Sbjct: 362 -----------GTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAV 408

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTST 539
            + G ++  G   YGQLG    DG       P +V+G    + V  +A G YH  A+ S 
Sbjct: 409 KSDGTMWAWGYNWYGQLG----DGTTINSSTPVQVNG---LTDVIAIAGGYYHTIAMKSD 461

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSP 564
             V+TWG    GQLG G   NR++P
Sbjct: 462 GAVWTWGFNYYGQLGDGSITNRSTP 486



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 155/329 (47%), Gaps = 37/329 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H + +   G +++WG    G+LG     + S P  +  L+  +V  +A G YHT
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLT--DVIAIAGGAYHT 205

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G ++ WG+     G LG GS      P +VSG  D I    I+ G  HT  + S
Sbjct: 206 IALKSDGTVWAWGNN--EGGQLGDGSTTDRSTPVQVSGLTDVIA---IAGGYAHTIALKS 260

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G ++ +GD   G LG G   + SIP +V  L  +    ++ G  HT A+          
Sbjct: 261 DGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV--IAIAGGNAHTIAL---------- 308

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                S G ++ WGD + G+LG G    R  P  V+ L D  +  +A G+  ++ L + G
Sbjct: 309 ----KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD--VIAIAGGYSHTIVLRSDG 362

Query: 489 HVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            V+T G    GQLG    DG       P +V G +A+  V  +A G YH  A+ S   ++
Sbjct: 363 TVWTWGHNEGGQLG----DGSTTNRSTPVQVSG-LAD--VIAIAGGVYHTIAVKSDGTMW 415

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            WG    GQLG G   N ++P  V+ L D
Sbjct: 416 AWGYNWYGQLGDGTTINSSTPVQVNGLTD 444



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 155/328 (47%), Gaps = 43/328 (13%)

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            DV  IA G  H + +     +++WG  S G+LG G   + S P  +  L+  N+  +A G
Sbjct: 1090 DVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLT--NIIAIAGG 1147

Query: 305  EYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLS--YISCGLW 361
              HT A+   G ++ WG   YN  G LG GS  +   P +VSG  D I ++  Y+     
Sbjct: 1148 YVHTIALKSDGTVWAWG---YNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYV----- 1199

Query: 362  HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            HT  + S G ++ +G   +G LG G   + S P +V  L  +    ++ G  HT A+   
Sbjct: 1200 HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV--IAIAGGYVHTIAL--- 1254

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                        S G ++TWG  + G+LG G    RL P  V+ L D     +A G   +
Sbjct: 1255 -----------KSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA--IAIAGGDYHT 1301

Query: 482  VALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAAL 536
            +AL +   V+  GS +YGQLG    DG     L P +V G + ++    +A G YH  AL
Sbjct: 1302 IALKSDNTVWAWGSNSYGQLG----DGTTINRLTPVQVSG-LTDAI--AIAGGDYHTIAL 1354

Query: 537  TSTSKVYTWGKGANGQLGHGDKDNRNSP 564
             S + V+ WG  + GQLG     N  +P
Sbjct: 1355 KSDNTVWAWGSNSYGQLGDVSTANSLTP 1382



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 153/329 (46%), Gaps = 37/329 (11%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H + +   G ++++G     +LG G   D S P  +  L+  +   +A G YHT
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT--DAIAIAGGVYHT 653

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G ++TWG    NSG LG G+ ++   P +V G  D I    I+ G +HT  + S
Sbjct: 654 IALKSDGTVWTWG--WNNSGQLGDGTTINRSTPVQVIGLTDVIA---IAGGDYHTIALKS 708

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G ++T+G   +G LG G   + S P +V+ L  +    ++ G  H+ A+          
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADI--IAIAGGYVHSIAL---------- 756

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                S G ++ WG    G+LG G     L P  V+ L D  I  +A G+  ++AL + G
Sbjct: 757 ----KSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTD--IIAIAGGYIHTIALKSDG 810

Query: 489 HVYTMGSAAYGQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            V+  G    GQLG    DG       P +V G    + V  V    YH  AL S   V+
Sbjct: 811 TVWAWGHNEGGQLG----DGTTTNSSTPVQVSGL---TDVIAVTARLYHTIALKSDGTVW 863

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           TWG+   GQLG G    R+ P  V  L D
Sbjct: 864 TWGRNIYGQLGDGSTTERSLPVQVIGLTD 892



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 159/343 (46%), Gaps = 45/343 (13%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           TD+  P  V+ +   D   IA G  H + +   G +++WG  + G+LG G   + S P  
Sbjct: 629 TDSSTP--VQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTP-- 684

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           ++++   +V  +A G+YHT A+   G ++TWG   Y  G LG G+  +   P +V G  D
Sbjct: 685 VQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYY--GQLGGGATTNRSTPVQVKGLAD 742

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTT 406
            I    I+ G  H+  + S G ++ +G   +G LG G   DH++   P +V  L  +   
Sbjct: 743 IIA---IAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLT---PVQVSGLTDI--I 794

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            ++ G  HT A+               S G ++ WG  + G+LG G       P  V+ L
Sbjct: 795 AIAGGYIHTIAL--------------KSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGL 840

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-----VPTRVDGEIAES 521
            D         H  ++AL + G V+T G   YGQLG    DG      +P +V   I  +
Sbjct: 841 TDVIAVTARLYH--TIALKSDGTVWTWGRNIYGQLG----DGSTTERSLPVQV---IGLT 891

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
            V  +A G YH  AL S   V+ WG   N QLG+    N ++P
Sbjct: 892 DVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP 934



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 157/340 (46%), Gaps = 43/340 (12%)

Query: 241  TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
            T+ L    I+ GA H + +   G +++ G    G+LG G   + S P  +  L+  +V  
Sbjct: 1036 TIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLT--DVIA 1093

Query: 301  VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS--GNLDGIHLSYISC 358
            +A G+YHT A+     ++ WG  +Y  G LG G+  +  IP  V+   N+  I   Y+  
Sbjct: 1094 IAGGDYHTIALKSDNTVWAWGSNSY--GQLGDGTITNRSIPTPVTYLTNIIAIAGGYV-- 1149

Query: 359  GLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW-HTAA 417
               HT  + S G ++ +G   +G LG G   + S P +V    GL       G + HT A
Sbjct: 1150 ---HTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVS---GLTDVIAIAGEYVHTVA 1203

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            +               S G ++ WG    G+LG G    R  P  V+ L D  +  +A G
Sbjct: 1204 L--------------KSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD--VIAIAGG 1247

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYH 532
            +  ++AL + G V+T G    GQLG    DG     L P +V G + ++    +A G YH
Sbjct: 1248 YVHTIALKSDGTVWTWGWNNSGQLG----DGTTINRLTPVQVSG-LTDAI--AIAGGDYH 1300

Query: 533  VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
              AL S + V+ WG  + GQLG G   NR +P  V  L D
Sbjct: 1301 TIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTD 1340



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 197/459 (42%), Gaps = 80/459 (17%)

Query: 162 AFPDNSNDRSSAAETFRIS-------LSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANG 213
           A+ DN   R     T   S       LS V++ +  G+AH     S G V+ WG+     
Sbjct: 266 AWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAG-GNAHTIALKSDGTVWAWGDNE--- 321

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESG 273
              GG+   G + +R T       V+ +   DV  IA G  H +++   G +++WG   G
Sbjct: 322 ---GGQLGDGSTTNRST------PVKVSGLADVIAIAGGYSHTIVLRSDGTVWTWGHNEG 372

Query: 274 GRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           G+LG G   + S P  +  L+  +V  +A G YHT AV   G ++ WG   Y  G LG G
Sbjct: 373 GQLGDGSTTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWY--GQLGDG 428

Query: 334 SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
           + ++   P +V+G  D I    I+ G +HT  + S G ++T+G   +G LG G   + S 
Sbjct: 429 TTINSSTPVQVNGLTDVIA---IAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRST 485

Query: 394 P--REVETLRGLRTTRVSCGV-------------WHTAAVVVAT---DSSSSS-----PS 430
           P  R +  ++ + T  V+ G              W     V  T   D  +S+      +
Sbjct: 486 PAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYFDAT 545

Query: 431 GSTSCGKLFTWGDGDKGRLGH--GDKEPRLFPECVAPLIDENI--------------CQV 474
            + SCG   T+       +G   GD  P     C   +  +NI               Q+
Sbjct: 546 KTISCGTGSTY-------VGATLGDLTPWTTYYC--RIASQNIGGIYYGSETTFMPRTQI 596

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           + G   ++ L   G V+  G+    QLG     D   P +V G + ++    +A G YH 
Sbjct: 597 SAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSG-LTDAI--AIAGGVYHT 653

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            AL S   V+TWG   +GQLG G   NR++P  V  L D
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD 692



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 149/385 (38%), Gaps = 93/385 (24%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           DV  IA G  H + V   G +++WG    G+LG G   + S P  +  L+  +V  +A G
Sbjct: 394 DVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLT--DVIAIAGG 451

Query: 305 EYHTCAVTRSGDLYTWGDGTY--------------------------------------- 325
            YHT A+   G ++TWG   Y                                       
Sbjct: 452 YYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVS 511

Query: 326 -NSGLL-----GHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF---- 375
            +S LL     G+G   + W     S  +       ISCG   T V  + G L  +    
Sbjct: 512 LSSALLNGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYY 571

Query: 376 ---GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
                 + G + +G   +T +PR          T++S G +HT  +          P G+
Sbjct: 572 CRIASQNIGGIYYGSE-TTFMPR----------TQISAGAYHTLTL---------KPDGT 611

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
                ++ +G     +LG G       P  V+ L D     +A G   ++AL + G V+T
Sbjct: 612 -----VWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA--IAIAGGVYHTIALKSDGTVWT 664

Query: 493 MGSAAYGQLGVPVADGLV-----PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            G    GQLG    DG       P +V   I  + V  +A G YH  AL S   V+TWG 
Sbjct: 665 WGWNNSGQLG----DGTTINRSTPVQV---IGLTDVIAIAGGDYHTIALKSDGTVWTWGF 717

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKD 572
              GQLG G   NR++P  V  L D
Sbjct: 718 NYYGQLGGGATTNRSTPVQVKGLAD 742



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 158/383 (41%), Gaps = 63/383 (16%)

Query: 201  GDVFIWGEGIANGF--LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
            G V+ WG    NG+  LG G           TD L P  V+ +   D+  IA G  H + 
Sbjct: 760  GTVWAWGY---NGYGQLGDGS---------TTDHLTP--VQVSGLTDIIAIAGGYIHTIA 805

Query: 259  VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
            +   G +++WG   GG+LG G   + S P  +  L+  +V  V    YHT A+   G ++
Sbjct: 806  LKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT--DVIAVTARLYHTIALKSDGTVW 863

Query: 319  TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            TWG   Y  G LG GS     +P +V G  D I    I+ G +HT  + S G ++ +G  
Sbjct: 864  TWGRNIY--GQLGDGSTTERSLPVQVIGLTDVIA---IAGGYYHTIALKSDGAVWAWGYN 918

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
                LG+    ++S P     +R LR    S     T AV+          +GST+C  L
Sbjct: 919  GNNQLGNWSTKNSSTP-----VRSLRYDMNSV---TTPAVI----------TGSTTCVSL 960

Query: 439  FT-----WGDGDKGR----LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
             +     W DG++        +G      F         +    + CG   +    T G 
Sbjct: 961  SSVLLNGWVDGNRAATTAWFDYGTSSGVYF---------DTTATIPCGTSSAYISATLGS 1011

Query: 490  VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            + T  +  Y ++    + G+       E       +++ GAYH   L     V+  G   
Sbjct: 1012 L-TPWTTYYYRIAAQNSRGI---SYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANW 1067

Query: 550  NGQLGHGDKDNRNSPTLVDFLKD 572
            NGQLG G   NR++P  V  L D
Sbjct: 1068 NGQLGDGTTINRSTPVQVSGLTD 1090



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAY 531
           Q++ G   ++ L   G V+T G+   GQLG     +   P +V G    + V  +A GAY
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGL---TDVIAIAGGAY 203

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
           H  AL S   V+ WG    GQLG G   +R++P  V  L D
Sbjct: 204 HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD 244


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 40/375 (10%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G+V+ WG G   G LG G      ++S +T  ++ K +     +DVH    G R  + 
Sbjct: 50  SSGEVYSWGYG-DRGQLGNG------TWSARTTPVMAKGLNHV--IDVH---TGVRSTMA 97

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +   G +++WG    G+LG G   D++ P  +  LSG+       G YH+ A++  G ++
Sbjct: 98  LRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDGSVW 156

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           TWG    ++G LG+G+ +    P +V+G  D   ++ I+ G + +  + S G ++ +G  
Sbjct: 157 TWGKN--DNGELGNGTTLQQNTPVQVAGLND---VTAIAAGGYFSLALKSDGTVWAWGVN 211

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LG G      +P +V  L  +    ++ G  H+ AV              T  G +
Sbjct: 212 GDGELGDGTTTDRYVPVQVAGLTDVMA--IAAGGSHSLAV--------------TQDGTV 255

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           + WG    G LG G +  R  P  +  L  ++I  VA G   S+AL  +G+V++ G  + 
Sbjct: 256 WAWGKNTYGTLGDGTRTNRTRPVQIKNL--QHIVAVAGGGYHSLALDRTGNVWSWGDNSQ 313

Query: 499 GQLGVPV-ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            QLGV   A  L+P  V G      V E+A G +H  A+     V+ WG    GQLG G 
Sbjct: 314 RQLGVGSNASSLIPVPVSGI---EHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370

Query: 558 KDNRNSPTLVDFLKD 572
              R++PTL   + D
Sbjct: 371 SSTRDTPTLTKAVLD 385



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 41/252 (16%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR-------GLRTT-- 406
           +  G +HTA + S+G ++++G G  G LG+G   + + P   + L        G+R+T  
Sbjct: 38  LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVHTGVRSTMA 97

Query: 407 -RVSCGVW-----HTAAVVVATDSSSSSP---SGSTSC-----------------GKLFT 440
            R    VW         + + T +  + P   SG +                   G ++T
Sbjct: 98  LRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGYHSMALSEDGSVWT 157

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG  D G LG+G    +  P  VA L D  +  +A G   S+AL + G V+  G    G+
Sbjct: 158 WGKNDNGELGNGTTLQQNTPVQVAGLND--VTAIAAGGYFSLALKSDGTVWAWGVNGDGE 215

Query: 501 LG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
           LG     D  VP +V G    + V  +A G  H  A+T    V+ WGK   G LG G + 
Sbjct: 216 LGDGTTTDRYVPVQVAG---LTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRT 272

Query: 560 NRNSPTLVDFLK 571
           NR  P  +  L+
Sbjct: 273 NRTRPVQIKNLQ 284



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--VEEVACGA 530
           ++  G+  + +L +SG VY+ G    GQLG    +G    R    +A+    V +V  G 
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLG----NGTWSARTTPVMAKGLNHVIDVHTGV 92

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
               AL S   V+TWG   NGQLG G   + N P  V  L    +K V  GL +      
Sbjct: 93  RSTMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSG--IKAVSGGLGY------ 144

Query: 591 HKWVSSVDHSVCSSCHNPFG 610
           H    S D SV +   N  G
Sbjct: 145 HSMALSEDGSVWTWGKNDNG 164


>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 306

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 126/248 (50%), Gaps = 27/248 (10%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+T+G G +G LGHGD+ +   P+ V+ L G R  +V+CG    A  +  TD        
Sbjct: 2   LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDE------- 53

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
               G +F+WGDGD G+LG G  E    P+ +  L  + +CQ+ CG   S+ALT SG V+
Sbjct: 54  ----GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 109

Query: 492 TMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           T G   Y +LG    V V     P  V+G   +  V  VA GA H  A+T   +VY WG 
Sbjct: 110 TWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGD 165

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN 607
             +GQ G+G       PTLV  L+ +++ RV CG + +       W ++VD +   S H 
Sbjct: 166 NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV-----AW-TTVDVAT-PSVHE 218

Query: 608 PFGFRRKR 615
           P  F+  R
Sbjct: 219 PVLFQTAR 226



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 120/228 (52%), Gaps = 18/228 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA--VLV 259
           +++ WG G   G LG G++         T  L PK V+  +   V  +ACG+R A  + +
Sbjct: 1   ELYTWGLG-EYGRLGHGDN---------TTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 50

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T +G +FSWG+   G+LG G     + PQ IE L+G  V  + CG   + A+T+SG ++T
Sbjct: 51  TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 110

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG G Y    LGHGS V    P+ V G L G  + +++ G  H   VT AG ++ +GD  
Sbjct: 111 WGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 167

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA---VVVATDS 424
            G  G+G       P  V+ L G + TRV+CG  H+ A   V VAT S
Sbjct: 168 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 215



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 8/157 (5%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSVALTTSGHVYTMG 494
           +L+TWG G+ GRLGHGD   +L P+ V  L+   + QVACG     ++ALT  G V++ G
Sbjct: 1   ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 60

Query: 495 SAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
              +G+LG   ++G  +P  ++  +    V ++ CGA    ALT +  V+TWGKG   +L
Sbjct: 61  DGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 119

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           GHG   +   P +V+ L+ K++  V  G    A+ CL
Sbjct: 120 GHGSDVHVRKPQVVEGLRGKKIVHVAVG----ALHCL 152



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 13/168 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG+G       GG               +P+ +E      V  I CGA+ ++ +T
Sbjct: 54  GLVFSWGDGDFGKLGRGGSEGCN----------IPQNIERLNGQGVCQIECGAQFSLALT 103

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G +++WG+    RLGHG +  V  PQ++E L G  +  VA G  H  AVT +G +Y W
Sbjct: 104 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 163

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
           GD  +  G  G+G+      P  V G L+G  ++ ++CG  H+   T+
Sbjct: 164 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 208


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 34/312 (10%)

Query: 229 QTDALLPKAVESTMALDVHNIA----------CGARHAVLVTKQGEIF-SWGEESGGRLG 277
            T ALL K  ES+  L    I+          C   +A  V   G +  SWG    G+LG
Sbjct: 23  HTVALLSKQFESSEMLARFLISTPLLPESWRLCSKVNASAVNFPGNVVCSWGRGEDGQLG 82

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG-DLYTWGDGTYNSGLLGHGSKV 336
           HG   D   P  +    G ++  V CG  +T A ++SG D+Y+WG G +  G LGHG   
Sbjct: 83  HGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDF--GRLGHGDPS 140

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
             +IP  +   L G+ +  ISCG  H   VT    + ++G    G LG G    + +P++
Sbjct: 141 DLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQK 199

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           +    G+R   V+ G  H+ A+              T  G L+ WG G  G LG GD   
Sbjct: 200 ILAFEGIRIKMVAAGAEHSVAI--------------TEDGDLYGWGWGRYGNLGLGDTND 245

Query: 457 RLFPECVAPLID-ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRV 514
           RL PE V   ID + I  V+CG   ++++++SG +YT G + YGQLG     D LVP +V
Sbjct: 246 RLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 515 DGEIAESFVEEV 526
              +++  + +V
Sbjct: 304 QA-LSDKLISQV 314



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 14/199 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV+ WG G   G LG G+          +D  +P  + +   L +  I+CG  H + VT 
Sbjct: 122 DVYSWGWG-DFGRLGHGD---------PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           + ++ SWG    G LG G   D   PQ I    G+ +++VA G  H+ A+T  GDLY WG
Sbjct: 172 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 231

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G      IP KV  N+DG  +  +SCG  HT  ++S+G L+T G   +G
Sbjct: 232 WGRY--GNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 287

Query: 382 ALGHGDHISTSIPREVETL 400
            LGHGD     +PR+V+ L
Sbjct: 288 QLGHGDFEDCLVPRKVQAL 306



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 137/280 (48%), Gaps = 22/280 (7%)

Query: 303 CGEYHTCAVTRSGDLY-TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           C + +  AV   G++  +WG G    G LGHG      +P K+S   DG  +  ++CG  
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGAD 111

Query: 362 HTAVVTSAGH-LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
           +T   + +G  ++++G G FG LGHGD     IP  +  L+GLR  ++SCG  H  AV +
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                           K+ +WG    G LG G  +    P+ +       I  VA G + 
Sbjct: 172 EN--------------KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEH 217

Query: 481 SVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           SVA+T  G +Y  G   YG LG+    D L+P +V+  I    +  V+CG  H  +++S+
Sbjct: 218 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSS 275

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
             +YT G    GQLGHGD ++   P  V  L DK + +V+
Sbjct: 276 GGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 315



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 16/216 (7%)

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           ++G G  G LGHGD     +P ++    G     V+CG  +T A              S 
Sbjct: 72  SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVAR-------------SK 118

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S   +++WG GD GRLGHGD      P  +  L    I Q++CG    +A+T    V + 
Sbjct: 119 SGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSW 178

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    G+LG+    D  VP ++        ++ VA GA H  A+T    +Y WG G  G 
Sbjct: 179 GRNQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 237

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LG GD ++R  P  V+   DK V  V CG   T  I
Sbjct: 238 LGLGDTNDRLIPEKVNIDGDKIV-MVSCGWRHTISI 272


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 39/333 (11%)

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSG----LLGHGSKVSCW 339
           V  P+ + +L+G  +  VACG  H   +T +GD+Y++GD          +  + +     
Sbjct: 485 VLRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADND 544

Query: 340 IPRKVSGNL---DGIH---LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI 393
             R +S  L     +H   ++ ISCG  H+  +T AG L+T+G G  G LGHGD    ++
Sbjct: 545 YTRSISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAV 604

Query: 394 PREVETLRGLRTTRVSCGV----WHTAAVVVATDSSSSSPSGSTSC-----------GKL 438
           PR+V +L        SCG+    W      +      +  S +  C           G +
Sbjct: 605 PRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRIS-NVVCGWNFTAALDRQGNI 663

Query: 439 FTWGDGDKGR--LGHGDKEPRLFPECVAPLID----ENICQVACGHDLSVALTTSGHVYT 492
           FTWG   +G+  LG+ DK+ ++ P CV  L +         VACG+  +V LT SG +Y+
Sbjct: 664 FTWGKTGEGQCGLGYVDKD-QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYS 722

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G   YGQL    A   +P+  D   A   +  V CGA+H  A T    ++ WG  + G 
Sbjct: 723 WGLGEYGQL----ARVQLPS--DALCAPDQLTRVYCGAFHSIATTEKRVMFAWGLNSYGA 776

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            G G   N++ P  +D    +    V CG  +T
Sbjct: 777 CGLGHTANKDKPERIDCFSSQTELVVACGHKYT 809



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 172/428 (40%), Gaps = 88/428 (20%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGY 224
           + S+D    AE              H + H+  +    +++WG   +   L GG   V  
Sbjct: 431 NESDDEEGTAEDDAEVEDEDERELDHLNDHQSEEPSSHMWVWGRPPS---LEGGTPLV-- 485

Query: 225 SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG------H 278
                   L PK V       +  +ACG  H + +T  G+++S+G+    +        +
Sbjct: 486 --------LRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATN 537

Query: 279 GREADVSHPQLI-------EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG 331
              AD  + + I       + L    + +++CG  H+ A+T +G+LYTWG G    G LG
Sbjct: 538 ANSADNDYTRSISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSG--EDGRLG 595

Query: 332 HGSKVSCWIPRKVS---------------------------GNLDGIHLSYISCGLWHTA 364
           HG      +PRKV                            G   G  +S + CG   TA
Sbjct: 596 HGDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTA 655

Query: 365 VVTSAGHLFTFGDGSFGALGHG----DHISTSIPREVETLR----GLRTTRVSCGVWHTA 416
            +   G++FT+G    G  G G    D +   +PR VE LR    G     V+CG  HT 
Sbjct: 656 ALDRQGNIFTWGKTGEGQCGLGYVDKDQV---VPRCVEKLREVAAGSAAVDVACGYTHTV 712

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
            +              T+ G+L++WG G+ G+L       R+     A    + + +V C
Sbjct: 713 VL--------------TASGELYSWGLGEYGQLA------RVQLPSDALCAPDQLTRVYC 752

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           G   S+A T    ++  G  +YG  G+   A+   P R+D   +++ +  VACG  +  A
Sbjct: 753 GAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTEL-VVACGHKYTIA 811

Query: 536 LTSTSKVY 543
           L     +Y
Sbjct: 812 LEVDPALY 819


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVT---VGKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEK-VVY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH--MLVFAT 404


>gi|196012953|ref|XP_002116338.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
 gi|190580929|gb|EDV21008.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
          Length = 448

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 50/364 (13%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
           + + + L P   +    LD  +IACG     +V++ G +F+ G+   G LG G   DV+ 
Sbjct: 21  ADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGVFACGKGHMGCLGLGNCDDVNI 80

Query: 287 PQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P+ I  L  V V  VA   G  H  A+T  G +Y+WG G  + G LGHG+ +    P  +
Sbjct: 81  PRQIPQLLPVMVTTVAIHPGGRHAMALTAEGIVYSWGCG--DRGQLGHGNTLGYLDPTLI 138

Query: 345 SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLR 404
              L    ++ I+CG  H+  V S G +F++GDGS GA  HG++++  +P+ + +L G  
Sbjct: 139 D-ELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGACVHGNNLAQLLPK-IMSLNGKH 196

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECV 463
              V+CG  +T A  VA D              +++WG G  G LG+G K P    P  +
Sbjct: 197 IMAVACGECYTIA--VAGDD-------------VWSWGHGGNGELGYGVKMPSYCMPTKI 241

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
             L  + I  VACG+  S A++ +G V+                           A    
Sbjct: 242 EALFFKGITNVACGYATSFAVSATGKVW---------------------------AWVKN 274

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           ++V    +H  A+    +VY WG    G +G+ D+D  N       L +K++  + CG+ 
Sbjct: 275 QKVVASLFHALAIDENGQVYIWGSQEIGPVGN-DEDAVNKQLKSFNLVNKKISNIACGIC 333

Query: 584 FTAI 587
           + A+
Sbjct: 334 WDAV 337



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 42/304 (13%)

Query: 197 FDSL------GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           +DSL      G VF  G+G   G LG G      +  RQ   LLP  V +T+A     I 
Sbjct: 47  YDSLFVVSRNGGVFACGKG-HMGCLGLGNCD-DVNIPRQIPQLLPVMV-TTVA-----IH 98

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G RHA+ +T +G ++SWG    G+LGHG       P LI+ L    V  +ACG  H+ A
Sbjct: 99  PGGRHAMALTAEGIVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIA 158

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           V   G +++WGDG+  +G   HG+ ++  +P+ +S  L+G H+  ++CG  +T +  +  
Sbjct: 159 VLSDGKIFSWGDGS--NGACVHGNNLAQLLPKIMS--LNGKHIMAVACGECYT-IAVAGD 213

Query: 371 HLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATD------ 423
            ++++G G  G LG+G  + S  +P ++E L     T V+CG + T+  V AT       
Sbjct: 214 DVWSWGHGGNGELGYGVKMPSYCMPTKIEALFFKGITNVACG-YATSFAVSATGKVWAWV 272

Query: 424 ------SSSSSPSGSTSCGKLFTWGDGDKGRLGHGD----KEPRLFPECVAPLIDENICQ 473
                 +S          G+++ WG  + G +G+ +    K+ + F      L+++ I  
Sbjct: 273 KNQKVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDAVNKQLKSF-----NLVNKKISN 327

Query: 474 VACG 477
           +ACG
Sbjct: 328 IACG 331


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 191/409 (46%), Gaps = 54/409 (13%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFS-RQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           V +WG G         + R+G S S  Q + +L +A+ES    +  +++CG  H +++T 
Sbjct: 30  VALWGNG--------DQGRLGLSESGSQFEPVLCRALESH---EPCSVSCGGAHTLILTD 78

Query: 262 QGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           +G +F+ G  S G+LG   +++ S  P  +       V  +A G YH+ A+T SG+ Y W
Sbjct: 79  KGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVW 137

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G  +     LG  +K     P+K+  +L G+ L  ++ G  H+  +   G + ++G   F
Sbjct: 138 GRNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRF 196

Query: 381 GALGHGDH---------ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           G LGHG+           +   PR +  L  L+   VS G+ H+A    A DS       
Sbjct: 197 GCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSA---CADDS------- 246

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
               G ++++G G   +LG G+      P C  P +   +  ++CG   + A+T  G +Y
Sbjct: 247 ----GTIYSFGQGSMCQLGLGNNNDASQP-CPIPDL-PRVSSISCGGYHTGAITQDGDIY 300

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN- 550
           T GS  +G LG        P R++  +AE+F+ E++CG  H AA+ S   +++WG G + 
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSY 358

Query: 551 -----------GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                      GQLG G   +   P  ++         V CG N TA I
Sbjct: 359 GTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V  WG     G LG GE    + F + T+   P+ +     L V +++ G  H+    
Sbjct: 186 GQVLSWGTN-RFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACAD 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+S+G+ S  +LG G   D S P  I  L    V  ++CG YHT A+T+ GD+YTW
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTW 302

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG-- 378
           G   +  G LG G + S   P ++  +L    +S ISCG  HTA + S G++F++G G  
Sbjct: 303 GSNEH--GCLGSGFRASS-KPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 379 ----------SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                     S G LG G       P  +E    L    VSCG  HTAA++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 34/299 (11%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G+ ++WG           E ++G     ++  + P+ +ES   + +  +A G  H++ 
Sbjct: 130 SSGETYVWGRN--------SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLG 181

Query: 259 VTKQGEIFSWGEESGGRLGHG---------READVSHPQLIEILSGVNVELVACGEYHTC 309
           + + G++ SWG    G LGHG         ++ +   P++I  L  + V  V+ G  H+ 
Sbjct: 182 LAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSA 241

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
               SG +Y++G G+     LG+ +  S  C IP       D   +S ISCG +HT  +T
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP-------DLPRVSSISCGGYHTGAIT 294

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G ++T+G    G LG G   S S P  +E+L     + +SCG  HTAA+   +D    
Sbjct: 295 QDGDIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI---SDGYIF 350

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI--CQVACGHDLSVAL 484
           S     S G   T  +   G+LG G      F E V   +D+ +    V+CG + + A+
Sbjct: 351 SWGWGGSYGTYATQAESSGGQLGVGTDFD--FFEPVPIEMDDRLSALHVSCGFNHTAAI 407


>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
 gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
          Length = 697

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 144/331 (43%), Gaps = 29/331 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           +F+WG  S   L             +++     + +  CG+     V+R        DG 
Sbjct: 320 VFTWGSSSSKPLMLNLPQRSLQITRVDVSRTQKMGVTNCGQIVIWEVSRCTKKIVQLDGK 379

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
                  +   ++  IPR + G    ++++++SCG   TA +T  G L TFG G+ G LG
Sbjct: 380 -------NDRNINIDIPRLLEGQ-SVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLG 431

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           HG+    + P+ VE+L G     VSCG  H  A+              T+  +LF WG G
Sbjct: 432 HGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAI--------------TAEHELFAWGRG 477

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           D GRLG  + +    PE +          V CG D S+ L   G +   GS    +L + 
Sbjct: 478 DNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLD 537

Query: 505 VAD-GLVP-----TRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            +D GLV      TRV      S  +E+VA G  H A +T   K+YT G    GQLG+  
Sbjct: 538 TSDTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQ 597

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              R S   V  L  KQ+K + CG  FT  +
Sbjct: 598 SKQRVSAKQVSSLNHKQIKYIACGDAFTIAV 628



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 29/297 (9%)

Query: 228 RQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
           R  +  +P+ +E    +++ +++CG      +T +G + ++G  + G LGHG   + +HP
Sbjct: 382 RNINIDIPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHP 441

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           +++E L G  +  V+CG  H  A+T   +L+ WG G  ++G LG  +  +  +P  +   
Sbjct: 442 KIVESLIGYEIVNVSCGASHIMAITAEHELFAWGRG--DNGRLGTSNTKTYSVPELIKLP 499

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFG---------DGSFGALGHGDHISTSIPREVE 398
            +    S + CG+  + V+   G L   G         D S   L    H  T +P    
Sbjct: 500 -ETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTSDTGLVDEKHSLTRVPS--M 556

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL 458
            L  L   +V+ G  HTA +              T  GKL+T G    G+LG+   + R+
Sbjct: 557 PLSSLSIEQVAAGTSHTAVI--------------TEDGKLYTCGVNTYGQLGYEQSKQRV 602

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRV 514
             + V+ L  + I  +ACG   ++A+T    VY  G  + G+LG+      V P R+
Sbjct: 603 SAKQVSSLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRGRLGLGTEKNFVEPQRI 659



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 46/312 (14%)

Query: 165 DNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSL----GDVFIWGEGIANGFLGGGEH 220
           D  NDR+   +  R+     V + +H S  + F +     G +  +G G ANG LG G  
Sbjct: 377 DGKNDRNINIDIPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSG-ANGCLGHGNF 435

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
                     +A  PK VES +  ++ N++CGA H + +T + E+F+WG    GRLG   
Sbjct: 436 ---------NEAAHPKIVESLIGYEIVNVSCGASHIMAITAEHELFAWGRGDNGRLGTSN 486

Query: 281 EADVSHPQLIE---------ILSGVNVELVAC--GEYHTCAVTRSGDLYTWGDGTYNSGL 329
               S P+LI+         +  G++  +V C  G    C   R+  L      T ++GL
Sbjct: 487 TKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSL---DTSDTGL 543

Query: 330 LGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
           +     ++    R  S  L  + +  ++ G  HTAV+T  G L+T G  ++G LG+    
Sbjct: 544 VDEKHSLT----RVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSK 599

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
                ++V +L   +   ++CG   T AV              T+  +++ WG G +GRL
Sbjct: 600 QRVSAKQVSSLNHKQIKYIACGDAFTIAV--------------TADNEVYAWGKGSRGRL 645

Query: 450 GHGDKEPRLFPE 461
           G G ++  + P+
Sbjct: 646 GLGTEKNFVEPQ 657



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 419 VVATDSSSSSPSGSTSCGKLFTWG-----------DGDKGRLGHGDKEPRLFP-ECVAPL 466
           +   D S +   G T+CG++  W            DG   R  + D  PRL   + V   
Sbjct: 342 ITRVDVSRTQKMGVTNCGQIVIWEVSRCTKKIVQLDGKNDRNINIDI-PRLLEGQSVV-- 398

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEE 525
              NI  V+CG   +  LT  G + T GS A G LG     +   P  V+  I    V  
Sbjct: 399 ---NITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHPKIVESLIGYEIVN- 454

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           V+CGA H+ A+T+  +++ WG+G NG+LG  +    + P L+   +  Q   V CG++ +
Sbjct: 455 VSCGASHIMAITAEHELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCS 514

Query: 586 AIIC 589
            ++C
Sbjct: 515 MVLC 518


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 184/412 (44%), Gaps = 61/412 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V  WG G  +G LG G    GY      +    + V +  AL V  +  G+R+++ +   
Sbjct: 13  VLAWGSG-EDGQLGMG----GYE-----EEDWARGVAALDALAVSAVVAGSRNSLAICAD 62

Query: 263 GEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           G +F+WG    G LGH  E    S P  ++ L+GV++   A G +H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 322 DGTYNSGLLGH-------GSKV---SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
              Y  G  G        G++       IP++ +  L    +  ++ G  H+ V+T  GH
Sbjct: 123 GNEY--GQCGEEAERKEDGTRALRRDIPIPQRCAPKL---KVRQVAAGGTHSVVLTQDGH 177

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++T+G         GD    S P  V+ L  ++   ++ G +H  A+             
Sbjct: 178 VWTWGQ----PWPPGDIKQISTPVRVQGLENVKV--IAVGAFHNLAL------------- 218

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G L+ WG+ + G+LG GD +PR  P  V  L D ++  +A G   S ALT  G VY
Sbjct: 219 -TEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVY 277

Query: 492 TMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
             G   +G+LG     +  +VP +V+    E  + +V+CG  H  ALT   +++++G+G 
Sbjct: 278 AWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALTRDGRMFSYGRGD 336

Query: 550 NGQLGHGDKDNRNSPTLV------------DFLKDKQVKRVVCGLNFTAIIC 589
           +G+LG+G K     P  V            D     Q + V CG   T  I 
Sbjct: 337 HGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 16/193 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + +T+ G +++WG    G+LG G     S P  +E LS +++  +A G
Sbjct: 204 NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAG 263

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            +H+ A+T+ G++Y WG G +  G LG G  K S  +P+KV   L G  +  +SCG  H+
Sbjct: 264 GWHSTALTKEGEVYAWGRGEH--GRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHS 320

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV------------ETLRGLRTTRVSCG 411
             +T  G +F++G G  G LG+G  ++T  P EV            ++    +   V+CG
Sbjct: 321 VALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACG 380

Query: 412 VWHTAAVVVATDS 424
             HT A+   T++
Sbjct: 381 GRHTLAIATWTEA 393



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 26/146 (17%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKA 237
           +SL  + +   H +A       G+V+ WG G         EH R+G+   + +  ++P+ 
Sbjct: 255 LSLVDIAAGGWHSTA---LTKEGEVYAWGRG---------EHGRLGFGDDKSSH-MVPQK 301

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI----- 292
           VE     D+  ++CG  H+V +T+ G +FS+G    GRLG+GR+    HP  + I     
Sbjct: 302 VELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPP 361

Query: 293 -LSGVN------VELVACGEYHTCAV 311
             SG +         VACG  HT A+
Sbjct: 362 GTSGGDSGGQWQARYVACGGRHTLAI 387


>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
          Length = 410

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 43/340 (12%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV--SHPQLIE 291
           +P+ +E+   L+V  +  G RH+ ++T+ G+++++G  + G LGHG E DV   +PQL+E
Sbjct: 42  IPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVE 101

Query: 292 ILSGVNVEL--VACGEYHTCAVTRSGDLYTWGDG----------TYNSGLLGHGSKVSCW 339
                N ++  V  GEYHT A+T  G++YTWG G          T   G LGHG K   +
Sbjct: 102 FFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHGDKKHHF 161

Query: 340 IPRKVS-GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVE 398
            P+KV     + I +S I  GL+HT  ++  G L+T+G G FG LG+  +  +  P   +
Sbjct: 162 FPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSYSLTPMLND 221

Query: 399 TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK---- 454
               ++  +           +   D +        + G L+ WG  D+G+LG G      
Sbjct: 222 EFHIMKQEKPDLK-------IQKIDVADEYTGALMNDGTLYVWGKNDRGQLGTGSGIGID 274

Query: 455 --EPRLFPECVAPLIDEN-----ICQVACGHDLSVALTTSGHVYTMG-SAAYGQLGVPVA 506
             E    P  +  ++D+N     +     G +  +      ++Y +G    Y    V + 
Sbjct: 275 MIESENVPIAIT-VLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGLKLDYSPKQVNI- 332

Query: 507 DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
                   + E  +  V +++CG  H   L + +K+  WG
Sbjct: 333 -------FNEEFKKEDVTQLSCGRKHYCVLNNQNKLMVWG 365



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 40/242 (16%)

Query: 340 IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDH--ISTSIPREV 397
           IP+K+    D +++  ++ GL H+AV+T  G L+TFG G++G LGHG    +    P+ V
Sbjct: 42  IPQKMEA-FDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLV 100

Query: 398 ETL--RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDK--------- 446
           E    R  +   V  G +HTAA+              TS G+++TWG G K         
Sbjct: 101 EFFEKRNKKIVEVGLGEYHTAAL--------------TSDGEVYTWGYGGKQTLFNWMIT 146

Query: 447 ---GRLGHGDKEPRLFPECVAPLIDENI--CQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
              G LGHGDK+   FP+ V      NI   ++  G   ++A++ +G +YT G   +G L
Sbjct: 147 QEVGGLGHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVL 206

Query: 502 G-VPVADGLVPTRVD------GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           G    +  L P   D       E  +  ++++     +  AL +   +Y WGK   GQLG
Sbjct: 207 GNASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGKNDRGQLG 266

Query: 555 HG 556
            G
Sbjct: 267 TG 268



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 32/199 (16%)

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
            I   IP+++E    L   +++ G+ H+A +              T  GKL+T+G G+ G
Sbjct: 37  QIPKGIPQKMEAFDKLNVKKLNIGLRHSAVI--------------TEDGKLYTFGSGNWG 82

Query: 448 RLGHGDKEPRLF--PECVAPLIDEN--ICQVACGHDLSVALTTSGHVYTMGSAAYGQL-- 501
            LGHG ++   F  P+ V      N  I +V  G   + ALT+ G VYT G      L  
Sbjct: 83  PLGHGSEKDVKFDNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFN 142

Query: 502 --------GVPVADG---LVPTRVDG-EIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
                   G+   D      P +VD  E     V  +  G YH  A++ T  +YTWG+G 
Sbjct: 143 WMITQEVGGLGHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGL 202

Query: 550 NGQLGHGDKDNRNSPTLVD 568
            G LG+       +P L D
Sbjct: 203 FGVLGNASNSYSLTPMLND 221



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 70/163 (42%), Gaps = 28/163 (17%)

Query: 456 PRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD 515
           P+  P+ +      N+ ++  G   S  +T  G +YT GS  +G LG      +   + D
Sbjct: 39  PKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDV---KFD 95

Query: 516 GEIAESFVE-------EVACGAYHVAALTSTSKVYTWGKGAN------------GQLGHG 556
                 F E       EV  G YH AALTS  +VYTWG G              G LGHG
Sbjct: 96  NPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHG 155

Query: 557 DKDNRNSPTLVDFLKDKQVK--RVVCGLNFTAIIC----LHKW 593
           DK +   P  VDF +   +K  R++ GL  T  I     L+ W
Sbjct: 156 DKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTW 198


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 176/376 (46%), Gaps = 60/376 (15%)

Query: 248 NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILS-GVNVELVACGE 305
           ++ACG  H + +T+ G +F+ G    G+LG G     +  P  IE+   G  V  ++ G 
Sbjct: 74  SLACGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDP--IEVTGFGEKVVQISAGN 131

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI--PRKVSGNLDGIHLSYISCGLWHT 363
           +H+CAVT  G+L+ WG  +  SG LG G  V   +  PRKV   L  + +  ++ G  H+
Sbjct: 132 HHSCAVTADGELFVWGKNS--SGQLGLGKGVGKVVSTPRKVD-YLADVRVRMVALGSEHS 188

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSI----------PREVETLRGLRTTRVSCGVW 413
             VT  G   ++G    G LGHG H S+ +          PR ++ L G++  R++ G+ 
Sbjct: 189 IAVTEGGEALSWGAAGAGRLGHG-HKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGML 247

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC- 472
           H+A +                 G LF +G   +   G  +  PR       P + E I  
Sbjct: 248 HSACI--------------DEKGTLFIFGQKTEKVFGRSNDAPR-------PTVVEEIQF 286

Query: 473 --QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGEIAESFVEEVAC 528
             +VACG   + ALT  G +Y+ GS   G LG+ V  G+V  P  +   + +  V +V+C
Sbjct: 287 SEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVT-GMVRSPEVLRSTLFKLPVSKVSC 345

Query: 529 GAYHVAALTSTSKVYTWGKG------------ANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           G  H A + S   +YTWG G            + GQLGHG+  +   P +V+  ++ +  
Sbjct: 346 GWKHTAVI-SGEDIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAV 404

Query: 577 RVVCGLNFTAIICLHK 592
            V CG N T  I  +K
Sbjct: 405 HVSCGFNHTGAIFEYK 420



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 146/337 (43%), Gaps = 38/337 (11%)

Query: 268 WGEESGGRLGHGREADVSHPQLIEIL---SGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           WG    GRLG G      +P         +G     +ACG  HT  +T+SG ++    G 
Sbjct: 39  WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVFA--TGL 96

Query: 325 YNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            + G LG GS  +  + P +V+G   G  +  IS G  H+  VT+ G LF +G  S G L
Sbjct: 97  NDFGQLGIGSSTTHIVDPIEVTGF--GEKVVQISAGNHHSCAVTADGELFVWGKNSSGQL 154

Query: 384 GHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           G G  +    S PR+V+ L  +R   V+ G  H+ AV              T  G+  +W
Sbjct: 155 GLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAV--------------TEGGEALSW 200

Query: 442 GDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           G    GRLGHG K   L          P  +  L    I ++A G   S  +   G ++ 
Sbjct: 201 GAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFI 260

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            G       G    D   PT V+ EI   F EEVACG YH  ALT    +Y+WG   NG 
Sbjct: 261 FGQKTEKVFGRS-NDAPRPTVVE-EI--QFSEEVACGGYHTCALTDGGDLYSWGSNENGC 316

Query: 553 LGHGDKDNRNSP-TLVDFLKDKQVKRVVCGLNFTAII 588
           LG G      SP  L   L    V +V CG   TA+I
Sbjct: 317 LGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI 353



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 130/302 (43%), Gaps = 80/302 (26%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           +S+ +H S     D  G++F+WG+  ++G LG G+  VG   S       P+ V+    +
Sbjct: 127 ISAGNHHSCAVTAD--GELFVWGKN-SSGQLGLGKG-VGKVVS------TPRKVDYLADV 176

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSG 295
            V  +A G+ H++ VT+ GE  SWG    GRLGHG ++ +           P+LI+ L G
Sbjct: 177 RVRMVALGSEHSIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDG 236

Query: 296 VNV------------------------------------------------ELVACGEYH 307
           V +                                                E VACG YH
Sbjct: 237 VKIKRIAAGMLHSACIDEKGTLFIFGQKTEKVFGRSNDAPRPTVVEEIQFSEEVACGGYH 296

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           TCA+T  GDLY+W  G+  +G LG G       P  +   L  + +S +SCG  HTAV++
Sbjct: 297 TCALTDGGDLYSW--GSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVIS 354

Query: 368 -----------SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
                      + G  F  G  S G LGHG+ +    P  VE  R  R   VSCG  HT 
Sbjct: 355 GEDIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTG 414

Query: 417 AV 418
           A+
Sbjct: 415 AI 416


>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
          Length = 1884

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 181/410 (44%), Gaps = 66/410 (16%)

Query: 191  GSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE--STMALDVHN 248
            G +H      G+V+ WG  +  G LG G   + Y          P+A+     M ++V +
Sbjct: 827  GFSHVVLIRNGNVYTWGSSV-QGCLGTGPSVLRYG--------PPQAISFFKIMEVEVLS 877

Query: 249  IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
            ++CG  H + VT  G +++WG    G+LG G+    S P+LI  L+   +     G+YH+
Sbjct: 878  VSCGHCHTLAVTNNG-VYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHS 936

Query: 309  CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
             A+T  G ++TWG G +  G LGHG+     +P  ++  L G  + YIS G  HT  +++
Sbjct: 937  VALTADGRVFTWGWGVH--GQLGHGNTDKKIVPTLITS-LLGTVIRYISAGHAHTLALST 993

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             G ++ FG   FG LG G ++ +S+P  ++ L   +   ++ G +H  AV          
Sbjct: 994  EGIVYAFGCNIFGQLGVGSNVKSSVP--IKVLLPEKIFLITTGYFHNLAV---------- 1041

Query: 429  PSGSTSCGKLFTWGDGDKG-RL-GHGDKEPRLFPECVAPL-----ID--ENICQVACGHD 479
                +   KL+ WG   +  RL     K  R+  +    +     ID  E +   AC +D
Sbjct: 1042 ----SYTNKLYVWGASPQVLRLQAQTQKRARILEQRDNIIKQFENIDEFEKVPDQACTND 1097

Query: 480  LSVALTTSGHVYTMGSAAYGQLGVPVADG------------------------LVPTRVD 515
             S  ++ S       +A   Q     +D                         L PT VD
Sbjct: 1098 TSEEVSESNA--QNKNAQVKQTESSYSDSRKKQLDNVCLKNVNVGSIEEAQTHLKPTVVD 1155

Query: 516  GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPT 565
              +    + +++ G +H A +T    +YTWG+  +GQ+G+G +     PT
Sbjct: 1156 TSLVRGDIIQISAGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIPT 1205



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 23/247 (9%)

Query: 303  CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG--NLDGIHLSYISCGL 360
            C  +    + R+G++YTWG      G LG G  V  + P +      +  + +  +SCG 
Sbjct: 825  CAGFSHVVLIRNGNVYTWGSSV--QGCLGTGPSVLRYGPPQAISFFKIMEVEVLSVSCGH 882

Query: 361  WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
             HT  VT+ G ++ +G   FG LG G  +  S P  +  L          G +H+ A+  
Sbjct: 883  CHTLAVTNNG-VYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHSVAL-- 939

Query: 421  ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                        T+ G++FTWG G  G+LGHG+ + ++ P  +  L+   I  ++ GH  
Sbjct: 940  ------------TADGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAH 987

Query: 481  SVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            ++AL+T G VY  G   +GQLGV       VP +V   +    +  +  G +H  A++ T
Sbjct: 988  TLALSTEGIVYAFGCNIFGQLGVGSNVKSSVPIKV---LLPEKIFLITTGYFHNLAVSYT 1044

Query: 540  SKVYTWG 546
            +K+Y WG
Sbjct: 1045 NKLYVWG 1051



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 6/150 (4%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPE---CVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           G ++TWG   +G LG G    R  P        +++  +  V+CGH  ++A+T +G VY 
Sbjct: 837 GNVYTWGSSVQGCLGTGPSVLRYGPPQAISFFKIMEVEVLSVSCGHCHTLAVTNNG-VYA 895

Query: 493 MGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            GS+ +GQLG+  +     P  +     E  ++ VA G YH  ALT+  +V+TWG G +G
Sbjct: 896 WGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVA-GQYHSVALTADGRVFTWGWGVHG 954

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           QLGHG+ D +  PTL+  L    ++ +  G
Sbjct: 955 QLGHGNTDKKIVPTLITSLLGTVIRYISAG 984



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 358  CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET---LRGLRTTRVSCGVWH 414
            C  +   V+   G+++T+G    G LG G  +    P +  +   +  +    VSCG  H
Sbjct: 825  CAGFSHVVLIRNGNVYTWGSSVQGCLGTGPSVLRYGPPQAISFFKIMEVEVLSVSCGHCH 884

Query: 415  TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
            T AV              T+ G ++ WG    G+LG G       PE +  L  E I   
Sbjct: 885  TLAV--------------TNNG-VYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDA 929

Query: 475  ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD-GLVPTRVDGEIAESFVEEVACGAYHV 533
              G   SVALT  G V+T G   +GQLG    D  +VPT +   +  + +  ++ G  H 
Sbjct: 930  VAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLG-TVIRYISAGHAHT 988

Query: 534  AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             AL++   VY +G    GQLG G     + P  V
Sbjct: 989  LALSTEGIVYAFGCNIFGQLGVGSNVKSSVPIKV 1022



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 23/160 (14%)

Query: 356  ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
            IS G  H A+VT  G L+T+G    G +G+G      IP           T +       
Sbjct: 1166 ISAGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIP-----------TPLCYNPASI 1214

Query: 416  AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-------ECVAPLID 468
             A V    +S          G +   G+ +K   G+G+ E +  P       E + P+I 
Sbjct: 1215 FAQVPPRHNSHRRDEEQELDGGMKNSGNSEKN--GNGNDEAKSSPAESSESREKINPII- 1271

Query: 469  ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVAD 507
                 + CG+D +VA+   G V   G+ +  QLG +P  D
Sbjct: 1272 -KTVGIYCGYDYTVAVQPGGTVLAWGNNSRAQLGRLPAKD 1310


>gi|449478696|ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE---ILSGVNVELVACGEYH 307
            G R  V+   + E++SWG  +  +LG GR  D + PQL+    + S   +  ++CG  H
Sbjct: 216 VGLREVVVDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAH 275

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
             A+T  G + TWG G  NSG LG G  +S   P+ V   L    ++++S G  H+  V+
Sbjct: 276 VIALTAGGGVLTWGRG--NSGQLGLGDMISSLHPKPVM-RLGSYFITHVSAGWSHSGFVS 332

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G L+T GDGSFG LGHGD+     P EV         +++CG+ H+ A+V        
Sbjct: 333 DEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKG------ 386

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTT 486
                +S  +++ +G G +G+LG   K   +  P   + L    I  +A G D S AL+ 
Sbjct: 387 -----SSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSA 441

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            GH+YT G           +D   P  +    + S   +VA G  H   LT   ++Y  G
Sbjct: 442 EGHLYTWGRGFKS-----TSDVYSPQHLP---SPSSFSKVALGWNHALVLTDEGELYMLG 493

Query: 547 KGANGQL 553
              +G L
Sbjct: 494 GKHHGAL 500



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 158/369 (42%), Gaps = 52/369 (14%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES---TMALDVHNIACGARHAVL 258
           +++ WG G  +  LG G         R  D  LP+ V +   + A  +  ++CG  H + 
Sbjct: 229 ELWSWGAG-TDAQLGTG---------RLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIA 278

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T  G + +WG  + G+LG G      HP+ +  L    +  V+ G  H+  V+  G LY
Sbjct: 279 LTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLY 338

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV---TSAGHLFTF 375
           T GDG++  G LGHG       P +V    D  H+  I+CG+ H+  +   +S   ++ F
Sbjct: 339 TCGDGSF--GQLGHGDYQLRCFPEEVLFFSDK-HVDKIACGMRHSLALVKGSSGEQVYGF 395

Query: 376 GDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G G  G LG    I T ++P     L       ++ G  H+AA+              ++
Sbjct: 396 GAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAAL--------------SA 441

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G L+TWG G K         P+  P         +  +VA G + ++ LT  G +Y +G
Sbjct: 442 EGHLYTWGRGFKST--SDVYSPQHLPS------PSSFSKVALGWNHALVLTDEGELYMLG 493

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF----------VEEVACGAYHVAALTSTSKVYT 544
              +G L        + +       ++F          V ++A GA H   +T    V T
Sbjct: 494 GKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKT 553

Query: 545 WGKGANGQL 553
           WG G +GQL
Sbjct: 554 WGWGEHGQL 562



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 5/150 (3%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDEN--ICQVACGHDLSVALTTSGHVYTM 493
           +L++WG G   +LG G  E    P+ V  P +     I  ++CG    +ALT  G V T 
Sbjct: 229 ELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVLTW 288

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    GQLG+  +   L P  V   +   F+  V+ G  H   ++   K+YT G G+ GQ
Sbjct: 289 GRGNSGQLGLGDMISSLHPKPV-MRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQ 347

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGL 582
           LGHGD   R  P  V F  DK V ++ CG+
Sbjct: 348 LGHGDYQLRCFPEEVLFFSDKHVDKIACGM 377



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           ++CG  HV ALT+   V TWG+G +GQLG GD  +   P  V  L    +  V  G + +
Sbjct: 269 LSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHS 328

Query: 586 AIICLH-KWVSSVDHSVCSSCHNPFGFRRKRHNCYNCGLVFCK-------ACSSRKSL 635
             +    K  +  D S     H  +  R     C+   ++F         AC  R SL
Sbjct: 329 GFVSDEGKLYTCGDGSFGQLGHGDYQLR-----CFPEEVLFFSDKHVDKIACGMRHSL 381


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 19/240 (7%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYH 307
           A G  H+  VT  G++++WG+   GRLGH    D   P+L+E L G  V  +AC  G+  
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           T  +T    +++WGDG Y  G LG G    C +P K+  +L G+ +  + CG   +  +T
Sbjct: 61  TLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALT 117

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
            +G ++T+G G +  LGHG       PR+V+ L+G +   ++ G  H             
Sbjct: 118 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC--------- 168

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
                T  G+++TWGD D+G+LG G       P  VA L  + + +VACG   ++A +TS
Sbjct: 169 -----TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 223



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 111/221 (50%), Gaps = 14/221 (6%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H+A VT+AG L+T+G G +G LGH D      P+ VE L+G R   ++CG      + + 
Sbjct: 6   HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 65

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
            D +            +++WGDGD G+LG G  +    P  +  L    + +V CG   S
Sbjct: 66  DDDT------------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 113

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           VALT SG VYT G   Y +LG    D +  P +V G   +  +  +A G+ H    T   
Sbjct: 114 VALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDG 172

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           +VYTWG    GQLG G  +    P LV  L+ K+V RV CG
Sbjct: 173 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACG 213



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 16/230 (6%)

Query: 191 GSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI 249
           G AH     + GD++ WG+G           R+G+S S   D L PK VE+     V +I
Sbjct: 3   GGAHSACVTAAGDLYTWGKGRYG--------RLGHSDSE--DQLKPKLVEALQGHRVVDI 52

Query: 250 ACGARHA--VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYH 307
           ACG+  A  + +T    ++SWG+   G+LG G       P  I+ L+G+ V  V CG   
Sbjct: 53  ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 112

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           + A+T+SG +YTWG G Y+   LGHGS      PR+V G L G  +  I+ G  H    T
Sbjct: 113 SVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 169

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
             G ++T+GD   G LG G   +   PR V  L+G +  RV+CG  HT A
Sbjct: 170 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 219



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 115/248 (46%), Gaps = 20/248 (8%)

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A G  H+  VT +GDLYTWG G Y  G LGH        P+ V   L G  +  I+CG  
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGSG 57

Query: 362 --HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
              T  +T    ++++GDG +G LG G      +P ++++L GL   +V CG   + A+ 
Sbjct: 58  DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL- 116

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHD 479
                        T  G ++TWG GD  RLGHG  +    P  V  L  + +  +A G  
Sbjct: 117 -------------TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL 163

Query: 480 LSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
             V  T  G VYT G    GQLG    + +   R+   +    V  VACG+ H  A  ST
Sbjct: 164 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-ST 222

Query: 540 SKVYTWGK 547
           SK  + GK
Sbjct: 223 SKPASAGK 230



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 8/144 (5%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +P  ++S   L V  + CG++ +V +TK G +++WG+    RLGHG +  V  P+ ++ L
Sbjct: 91  VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 150

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  V  +A G  H    T  G++YTWGD   + G LG G+  +   PR V+  L G  +
Sbjct: 151 QGKKVIAIATGSLHCVCCTEDGEVYTWGDN--DEGQLGDGTTNAIQRPRLVAA-LQGKKV 207

Query: 354 SYISCG-----LWHTAVVTSAGHL 372
           + ++CG      W T+   SAG L
Sbjct: 208 NRVACGSAHTLAWSTSKPASAGKL 231



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%)

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           A G  H A +T+   +YTWGKG  G+LGH D +++  P LV+ L+  +V  + CG     
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 587 IICL 590
            +CL
Sbjct: 61  TLCL 64



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGA--Y 531
           A G   S  +T +G +YT G   YG+LG     D L P  V+       V+ +ACG+   
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDA 59

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
               LT    V++WG G  G+LG G  D    P  +D L    V +V CG  F+  +
Sbjct: 60  QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 116


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 176/385 (45%), Gaps = 52/385 (13%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGV 296
           VE+  +  V  +  G+R+++ + + G +F+WG    G LGH  +    S P  +  L+G+
Sbjct: 35  VEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGL 94

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH-------GSKV---SCWIPRKVSG 346
            +   A G +H  AV  +G  Y WG   Y  G  G        G++        P++ + 
Sbjct: 95  KIVQAAIGGWHCLAVDDNGHAYAWGGNEY--GQCGEEPERKEDGTRALRRDIPTPQRCAP 152

Query: 347 NLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTT 406
            L    +  ++ G  H+ V+T  GH++T+G         GD    S P  V+ L  +R  
Sbjct: 153 KLK---VRQVAAGGTHSVVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRV- 204

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            ++ G +H  A+              T  G L+ WG+ + G+LG GD +PR  P  V  L
Sbjct: 205 -IAVGAFHNLAL--------------TEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGL 249

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVE 524
            D ++  +A G   S ALT  G VY  G   +G+LG     +  +VP +V+    E  V 
Sbjct: 250 SDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIV- 308

Query: 525 EVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF---------LKDK-- 573
           +V+CG  H  ALT   +++++G+G +G+LG+G K     P  VD           +D   
Sbjct: 309 QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQW 368

Query: 574 QVKRVVCGLNFTAIICLHKWVSSVD 598
           Q K V CG   T  I +  W  + D
Sbjct: 369 QAKYVACGGRHTLAIVV--WAETTD 391


>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
           siliculosus]
          Length = 983

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 135/287 (47%), Gaps = 28/287 (9%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
            P  V + + L    + CG +H V + K G + SWG    G+LGHG  A   HP+L+  L
Sbjct: 84  FPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRL 143

Query: 294 S----GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
                G  V  VACG YH+   T +G ++TWG   Y  G  G+GSK +  +P     +L 
Sbjct: 144 DPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRY--GQCGNGSKDNT-VPEPSLVDLS 200

Query: 350 GI------HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRG 402
            +       +  + CG  H+A+VT  G L+T+G  SFG LG  D   T  IP+EV     
Sbjct: 201 RVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSD 260

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPEC 462
               + + G +H  A+    +              +F+WG G +G+ GHG       P  
Sbjct: 261 KPLVQAAAGDFHMVALSRKRE--------------VFSWGYGAEGQGGHGSLLHMRMPRR 306

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL 509
           V+ L +  + QV CG   S+A+T  G+ Y  GSA  G  G+    GL
Sbjct: 307 VSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGL 353



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 148/316 (46%), Gaps = 42/316 (13%)

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWG--DGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           +  G +    A G  H+   T  G L+ WG  DG  +    G    V   IP        
Sbjct: 46  VKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTG----VCTQIP-------- 93

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR----GLRT 405
            +    + CG  HT  +   G + ++G G FG LGHGD+ S   PR +  L     G R 
Sbjct: 94  -LPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERV 152

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK-----EPRLFP 460
            +V+CG +H+A   VATD+           G++FTWG    G+ G+G K     EP L  
Sbjct: 153 VQVACGGYHSA---VATDA-----------GRVFTWGFNRYGQCGNGSKDNTVPEPSLVD 198

Query: 461 -ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV--PTRVDGE 517
              V P     + +V CG   S  +T  G +YT G+ ++G+LG+  A+  V  P  V   
Sbjct: 199 LSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVT-F 257

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
            ++  + + A G +H+ AL+   +V++WG GA GQ GHG   +   P  V  L++  V +
Sbjct: 258 FSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQ 317

Query: 578 VVCGLNFTAIICLHKW 593
           VVCG  ++  I +  +
Sbjct: 318 VVCGPWWSMAITVDGY 333



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 145/319 (45%), Gaps = 42/319 (13%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--VACGEYH 307
           A GA H++L T +G++F WG E G         DV HP    + + + +    V CG  H
Sbjct: 56  AAGANHSILRTSEGKLFRWGVEDG---------DV-HPFPTGVCTQIPLPCIEVCCGRKH 105

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD----GIHLSYISCGLWHT 363
           T A+ + G + +WG G +  G LGHG   S   PR +   LD    G  +  ++CG +H+
Sbjct: 106 TVALMKGGFVMSWGTGYF--GQLGHGDNASYRHPRLLR-RLDPQRLGERVVQVACGGYHS 162

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGL-----RTTRVSCGVWHTAA 417
           AV T AG +FT+G   +G  G+G   +T   P  V+  R          +V CG  H+A 
Sbjct: 163 AVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSAL 222

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVAC 476
           V              T  G L+TWG    G+LG  D E  +  P+ V    D+ + Q A 
Sbjct: 223 V--------------TRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAA 268

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           G    VAL+    V++ G  A GQ G   +    +P RV   + E  V +V CG +   A
Sbjct: 269 GDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVS-SLQEVPVAQVVCGPWWSMA 327

Query: 536 LTSTSKVYTWGKGANGQLG 554
           +T     Y WG    G  G
Sbjct: 328 ITVDGYCYAWGSADGGWTG 346


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 199/450 (44%), Gaps = 72/450 (16%)

Query: 165 DNSNDRSSAAETFRIS-LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVG 223
           D  ++R+   +   +S + SVV+  +H  A     S G V+ WG    +G LG G     
Sbjct: 133 DTRDNRTVPVQVTGLSGVVSVVAGDTHSLA---VRSDGSVWAWGRNT-SGQLGDGT---- 184

Query: 224 YSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD 283
                + D  +P  V+ T    V ++A G  H++ V   G +++WG  + G+LG   EA 
Sbjct: 185 -----RDDRAVP--VQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAA 237

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG--SKVSCWIP 341
              P  +E +SG  V  VA G+YH+ AV   G ++ WGD  Y  G LG G     S W+P
Sbjct: 238 YPVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLY--GQLGDGKLEGNSRWLP 293

Query: 342 RKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR 401
           ++V G L G+    +S G +H+ VV S G ++ +G+ ++G LG G     + P +V  + 
Sbjct: 294 KQVPG-LGGV--VAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVLGVS 350

Query: 402 GLRTTRVSCGVWHTAAV------------------------------------VVATDSS 425
           G     V+ G  H+  V                                    VV+  + 
Sbjct: 351 G--AVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGVVSVAAG 408

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                   S G ++ WGD   G+LG G +  R  P  V  L    +  VA G   S+A+ 
Sbjct: 409 GGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVPRQVPEL--SGVVAVAAGSSFSLAVR 466

Query: 486 TSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G V++ G  AYGQLG    D   VP  V  E++E  V  VA G+ H  A+ +   V+ 
Sbjct: 467 YDGSVWSWGDNAYGQLGHGSTDASSVPLHVR-ELSE--VVAVAAGSMHALAVRADGTVWG 523

Query: 545 WGKGANGQLGHGDKD---NRNSPTLVDFLK 571
           WG    GQLG G +     R SP  V  L 
Sbjct: 524 WGFNDYGQLGDGFEGISARRYSPVQVPGLS 553



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 187/438 (42%), Gaps = 90/438 (20%)

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           G + SR+T    P  V+      V  +A G  H++ +   G +++WG  + G+LG     
Sbjct: 83  GTTLSRRT----PVQVQGLSG--VAAVAAGHGHSLALRYDGTVWAWGNNAYGQLGDDTRD 136

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           + + P  +  LSGV V +VA G+ H+ AV   G ++ WG  T  SG LG G++    +P 
Sbjct: 137 NRTVPVQVTGLSGV-VSVVA-GDTHSLAVRSDGSVWAWGRNT--SGQLGDGTRDDRAVPV 192

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG 402
           +V+G L G+    ++ G  H+  V S G ++ +G+ + G LG     +  +P  VE + G
Sbjct: 193 QVTG-LSGV--VSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPWRVEDVSG 249

Query: 403 LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKE--PRLFP 460
           +    V+ G +H+ AV                 G ++ WGD   G+LG G  E   R  P
Sbjct: 250 V--VAVAAGQYHSLAV--------------RYDGTVWAWGDNLYGQLGDGKLEGNSRWLP 293

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG------------------ 502
           + V  L    +  V+ G   S+ + + G V+  G+ AYGQLG                  
Sbjct: 294 KQVPGL--GGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVLGVSG 351

Query: 503 -VPVADG-------------------LVPTRVDGEIAE----------SFVEEVACGAYH 532
            V VA G                   L   R DG +            S V  VA G  H
Sbjct: 352 AVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGH 411

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
           V AL S   V+ WG  A+GQLG G + +R  P  V  L    V  V  G +F+  +    
Sbjct: 412 VLALLSDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAV---- 465

Query: 593 WVSSVDHSVCSSCHNPFG 610
                D SV S   N +G
Sbjct: 466 ---RYDGSVWSWGDNAYG 480



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 165/374 (44%), Gaps = 50/374 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V+ WG   A G LGGG      S +     +    V   +A     +A G RH+++V 
Sbjct: 319 GTVWAWGNN-AYGQLGGG------SRAHAASPVQVLGVSGAVA-----VAAGYRHSLVVN 366

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G +++WG    G+ G G       P  +  LSGV    VA G  H  A+   G ++ W
Sbjct: 367 SDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGV--VSVAAGGGHVLALLSDGTVWAW 424

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           GD    SG LG G++ S W+PR+V   L G+    ++ G   +  V   G ++++GD ++
Sbjct: 425 GDNA--SGQLGDGTRHSRWVPRQVP-ELSGV--VAVAAGSSFSLAVRYDGSVWSWGDNAY 479

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LGHG   ++S+P  V  L       V+ G  H  AV               + G ++ 
Sbjct: 480 GQLGHGSTDASSVPLHVRELS--EVVAVAAGSMHALAV--------------RADGTVWG 523

Query: 441 WGDGDKGRLGHGDK--EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           WG  D G+LG G +    R +     P +   +  VA     S+A+   G V+  G+   
Sbjct: 524 WGFNDYGQLGDGFEGISARRYSPVQVPGL-SGMVSVAADFGHSLAVRADGTVWAWGNNTD 582

Query: 499 GQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            +LG    DG     LVP RV+   A   V  ++ G  +  A+ +   ++ WG    GQL
Sbjct: 583 SELG----DGTTTRRLVPLRVN---APGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQL 635

Query: 554 GHGDKDNRNSPTLV 567
           G G   +R  P  V
Sbjct: 636 GDGSTTSRAVPVRV 649



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 155/351 (44%), Gaps = 37/351 (10%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           H++ V   G +++ G    G+LG G       P  ++ LSG  V  VA G  H+ A+   
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG--VAAVAAGHGHSLALRYD 116

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G ++ WG+  Y  G LG  ++ +  +P +V+G L G+    +  G  H+  V S G ++ 
Sbjct: 117 GTVWAWGNNAY--GQLGDDTRDNRTVPVQVTG-LSGV--VSVVAGDTHSLAVRSDGSVWA 171

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           +G  + G LG G     ++P +V  L G+    V+ G  H+ AV               S
Sbjct: 172 WGRNTSGQLGDGTRDDRAVPVQVTGLSGV--VSVAAGGNHSLAV--------------RS 215

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G ++ WG+   G+LG   +     P  V  +    +  VA G   S+A+   G V+  G
Sbjct: 216 DGSVWAWGNNASGQLGGAPEAAYPVPWRVEDV--SGVVAVAAGQYHSLAVRYDGTVWAWG 273

Query: 495 SAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
              YGQLG    +G    +P +V G      V  V+ G YH   + S   V+ WG  A G
Sbjct: 274 DNLYGQLGDGKLEGNSRWLPKQVPG---LGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYG 330

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII----CLHKWVSSVD 598
           QLG G + +  SP  V  L       V  G   + ++     L  W S++D
Sbjct: 331 QLGGGSRAHAASP--VQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLD 379



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 160/383 (41%), Gaps = 54/383 (14%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           LS VVS ++ G       S G V+ WG+  A+G LG G        SR     +P+ +  
Sbjct: 399 LSGVVSVAAGGGHVLALLSDGTVWAWGDN-ASGQLGDGTRH-----SRWVPRQVPE-LSG 451

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
            +A     +A G+  ++ V   G ++SWG+ + G+LGHG     S P  +  LS   V  
Sbjct: 452 VVA-----VAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELS--EVVA 504

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSC--WIPRKVSGNLDGIHLSYIS 357
           VA G  H  AV   G ++ WG   Y  G LG G   +S   + P +V G L G  +  ++
Sbjct: 505 VAAGSMHALAVRADGTVWGWGFNDY--GQLGDGFEGISARRYSPVQVPG-LSG--MVSVA 559

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
               H+  V + G ++ +G+ +   LG G      +P  V                  A 
Sbjct: 560 ADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVN-----------------AP 602

Query: 418 VVVATDSSSSSPSGSTSC-GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
             VA  S+  + S +    G L+ WG    G+LG G    R  P  V   +      +A 
Sbjct: 603 GTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPV--RASTLAA 660

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVACGAY 531
           G   S+A+ + G ++  G    GQLG    DG      +P RV G    S V  V     
Sbjct: 661 GQSHSMAVGSDGFLWAWGFNFEGQLG----DGTLTHHALPVRVPG---MSGVVAVDVTLN 713

Query: 532 HVAALTSTSKVYTWGKGANGQLG 554
              A+ S   ++ WG    GQLG
Sbjct: 714 LSLAVRSDGSLWAWGNNDVGQLG 736


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 161/333 (48%), Gaps = 51/333 (15%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           QT+   P  +         +++CGA+H++ ++  GE++SWG  +GGR GHG EA    PQ
Sbjct: 169 QTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSLSPQ 228

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           ++  L G  +  +A G  H+ A    G +YTWG   Y  G LG+ +      P K+  ++
Sbjct: 229 VVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY--GQLGNNTAKKHLSPNKLR-DM 285

Query: 349 DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
           +  H+  ++CG  HT ++T+ GH+++FG    G LG G +  +  P++V+         +
Sbjct: 286 EKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPE--HAVDI 343

Query: 409 SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-----KEPRLFPECV 463
             G +HT  +              T+ G +++WG    G LG GD      +P+L P   
Sbjct: 344 VSGYYHTLCL--------------TNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIP--- 386

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFV 523
                  +  +   H+ S ++ +   +Y  G            +G  P    G++A    
Sbjct: 387 -------LSHIR--HNYSDSMDSYNSIYESG-----------GEGTNPRYAKGDVA---- 422

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           E++A GA++ A +T++ K+Y +G G + ++G+G
Sbjct: 423 EKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNG 455



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 29/311 (9%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL----VACGEYHTCAVTRSGD-LY 318
           +I+SWG    G+     ++ +  P  +E L  +N++L    +A G+ H  A+   G+ +Y
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQL--INMQLRVLAMASGDSHVLAIVHPGNQVY 154

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG   +  G LG G + +   P  ++     +  S +SCG  H+  +++ G L+++G G
Sbjct: 155 AWGCNRW--GQLGTGDQTNRATPTPIAIATPTVFTS-VSCGAQHSMALSNYGELYSWGCG 211

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           + G  GHG    +  P+ V  L G + T ++ G+ H+AA  +               G +
Sbjct: 212 TGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLR--------------GSV 257

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +TWG    G+LG+   +  L P  +  +   ++ +V CG + +  LT  GH+Y+ G    
Sbjct: 258 YTWGWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVC 317

Query: 499 GQLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLGV   AD   P +VD  + E  V+ +  G YH   LT+   VY+WG  ++G LG GD
Sbjct: 318 GQLGVGGYADSQQPKKVD--LPEHAVD-IVSGYYHTLCLTNKGNVYSWGYMSDGALGLGD 374

Query: 558 -KDNRNSPTLV 567
              +++ P L+
Sbjct: 375 IAGHQSKPKLI 385



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 16/207 (7%)

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A+V     ++ +G   +G LG GD  + + P  +        T VSCG  H+ A+     
Sbjct: 145 AIVHPGNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMAL----- 199

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    ++ G+L++WG G  GR GHG + P L P+ V+ L+ + I  +A G   S A
Sbjct: 200 ---------SNYGELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAA 250

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
               G VYT G   YGQLG   A   L P ++  ++ +  V +V CG  H   LT+   +
Sbjct: 251 TDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKLR-DMEKHHVVKVTCGKNHTHLLTAEGHI 309

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDF 569
           Y++G    GQLG G   +   P  VD 
Sbjct: 310 YSFGFNVCGQLGVGGYADSQQPKKVDL 336



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 97/235 (41%), Gaps = 17/235 (7%)

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            ++++G   FG           +P  VE L    LR   ++ G  H  A+V   +     
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGN----- 151

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
                   +++ WG    G+LG GD+  R  P  +A         V+CG   S+AL+  G
Sbjct: 152 --------QVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYG 203

Query: 489 HVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
            +Y+ G    G+ G    A  L P  V   + +  +  +A G  H AA      VYTWG 
Sbjct: 204 ELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQ-ITSMAGGMLHSAATDLRGSVYTWGW 262

Query: 548 GANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVC 602
              GQLG+       SP  +  ++   V +V CG N T ++     + S   +VC
Sbjct: 263 NKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVC 317



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 12/178 (6%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN--ICQVACGHDLSVALTTSGH-VYTM 493
           ++++WG    G+     +     P  V  LI+    +  +A G    +A+   G+ VY  
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G   +GQLG     +   PT +       F   V+CGA H  AL++  ++Y+WG G  G+
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTS-VSCGAQHSMALSNYGELYSWGCGTGGR 215

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
            GHG +    SP +V  L  KQ+  +  G+       LH   + +  SV +   N +G
Sbjct: 216 TGHGSEAPSLSPQVVSALVGKQITSMAGGM-------LHSAATDLRGSVYTWGWNKYG 266


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 182/439 (41%), Gaps = 84/439 (19%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WG G A+G LG G            +  +P  V       +   A GARH++ + 
Sbjct: 189 GYLYAWGVG-AHGVLGNGS---------VANRYIPVKVIFPQDTFISKCAAGARHSMALD 238

Query: 261 KQGEIFSWGE-----------ESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
            +G I+SWG               GRLG G       P LIEI     V  ++CG+ H+ 
Sbjct: 239 IKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSA 298

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
            + R G +YTWG  +   G LG G+ +S  +   +  +L GIH+  +SCG  +T  ++S+
Sbjct: 299 CLDRFGTVYTWG--SCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSS 356

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLR-----GLRTTRVSCGVWHTAAVVVATDS 424
           G ++ +G      LG        I   V +       G +   V+ G +  AA+ +    
Sbjct: 357 GKIYQWGS----TLGFNKQTDGLISHTVYSPEPVAETGFKNIFVTSGPYSFAAINIF--- 409

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA-------------------- 464
                      G L TWG G   RLGHGD +  + P+ V+                    
Sbjct: 410 -----------GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAF 458

Query: 465 -----------PLIDENICQVACGHDLSVALTTSGHVYTMGS---AAYGQLGVPVADGLV 510
                      P  +  I Q+A G      LT +G VYT G+           P+ +   
Sbjct: 459 KVEDTVEKTVNPYDERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCE 518

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           P   +     S + ++ACG+ H  A+T    +++WG   +GQLGHGD  +R  P  V  +
Sbjct: 519 PILFNH--FSSKITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNI 576

Query: 571 KDKQVKRVVCGLNFTAIIC 589
           ++     V  G++ +  IC
Sbjct: 577 EN--CINVFAGIDNSGCIC 593



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 168/385 (43%), Gaps = 66/385 (17%)

Query: 234 LPKAVESTMALDVHNIACGARH-AVLV------TKQGEIFSWGEESGGRLGHGREAD--- 283
            P+ +       V  ++CG  H AVLV         G +F++G  + GRLG+  + +   
Sbjct: 80  FPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEI 139

Query: 284 VSH----------------PQLIEILSGV--NVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           +S                 PQ + +  G+  NV  ++CG  HT   T  G LY WG G +
Sbjct: 140 ISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGANHTLVTTADGYLYAWGVGAH 199

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF----- 380
             G+LG+GS  + +IP KV    D   +S  + G  H+  +   G+++++G G       
Sbjct: 200 --GVLGNGSVANRYIPVKVIFPQD-TFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIF 256

Query: 381 ------GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
                 G LG G   S   P  +E        ++SCG  H+A +                
Sbjct: 257 HIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACL--------------DR 302

Query: 435 CGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
            G ++TWG    G+LG G+     L P  V  L   +I QV+CG   ++AL++SG +Y  
Sbjct: 303 FGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQW 362

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGE--IAESFVEE--VACGAYHVAALTSTSKVYTWGKG 548
           GS     LG     DGL+   V     +AE+  +   V  G Y  AA+     + TWG G
Sbjct: 363 GST----LGFNKQTDGLISHTVYSPEPVAETGFKNIFVTSGPYSFAAINIFGDLLTWGLG 418

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDK 573
              +LGHGD  +   P  V +L+ +
Sbjct: 419 TGYRLGHGDSKDHVIPKFVSYLRTR 443



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 197/473 (41%), Gaps = 104/473 (21%)

Query: 163 FPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           F  N  +     E F+IS        SH +     D  G V+ WG         GG+  +
Sbjct: 274 FTPNLIEIFDTYEVFQIS-----CGDSHSAC---LDRFGTVYTWGS------CRGGKLGL 319

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
           G   S   D L P  V+S   + +  ++CG+ + + ++  G+I+ WG      LG  ++ 
Sbjct: 320 GNILS---DVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST----LGFNKQT 372

Query: 283 D--VSH----PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKV 336
           D  +SH    P+ +      N+  V  G Y   A+   GDL TWG GT     LGHG   
Sbjct: 373 DGLISHTVYSPEPVAETGFKNI-FVTSGPYSFAAINIFGDLLTWGLGT--GYRLGHGDSK 429

Query: 337 SCWIPRKVSG-----NLDGIHLSY-------------------------ISCGLWHTAVV 366
              IP+ VS       +D +  +Y                         I+ G  H A++
Sbjct: 430 DHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDERRIQQIAVGDAHGALL 489

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL------RTTRVSCGVWHTAAVVV 420
           T  G ++T+G  +    G G + ST+ P E      L      + T+++CG  HT AV +
Sbjct: 490 TCNGTVYTWGANN----GTGCN-STTEPLENYCEPILFNHFSSKITKIACGSSHTLAVTI 544

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
                          G LF+WG  + G+LGHGD   R+ P+ V+ +  EN   V  G D 
Sbjct: 545 N--------------GLLFSWGSNESGQLGHGDLRSRVVPDSVSNI--ENCINVFAGIDN 588

Query: 481 SVALTTSGH----------VYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVAC 528
           S  + +  H          ++  GS+  G+LG+   +   ++  R   E+  + V  VA 
Sbjct: 589 SGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPR---EVNITGVHSVAL 645

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G  H  ALTS   +Y  G G+ G+LG G  +  NS T V    D +   V  G
Sbjct: 646 GPMHSLALTSDGTLYAAGAGSGGRLGTG--NTTNSFTFVQVKTDHKFVAVGAG 696



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 44/257 (17%)

Query: 371 HLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           ++ ++G   F  LG G  ++TS  PR +    G R T+VSCG +H+A +V ++       
Sbjct: 57  NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRE----- 111

Query: 430 SGSTSCGKLFTWGDGDKGRLG-HGDKEPRLF-----------PECVAPL---------ID 468
             + + G +FT+G G+ GRLG H D    +            P    P+         + 
Sbjct: 112 --NINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLR 169

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVA 527
            N+  ++CG + ++  T  G++Y  G  A+G LG   VA+  +P +V     ++F+ + A
Sbjct: 170 NNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFP-QDTFISKCA 228

Query: 528 CGAYHVAALTSTSKVYTWGKGA-----------NGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            GA H  AL     +++WG G            NG+LG G   +  +P L++     +V 
Sbjct: 229 AGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVF 288

Query: 577 RVVCGLNFTAIICLHKW 593
           ++ CG + +A  CL ++
Sbjct: 289 QISCGDSHSA--CLDRF 303



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 64/310 (20%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT-------S 368
           ++ +WG   +N   LG G +V+     +V     G  ++ +SCG +H+AV+        +
Sbjct: 57  NVLSWGKVPFNC--LGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENIN 114

Query: 369 AGHLFTFGDGSFGALGHGDHISTS---------------------IPREVETLRGLR--T 405
           AG +FTFG G+ G LG+  HI T+                     +P+ V    GLR   
Sbjct: 115 AGTVFTFGLGNSGRLGY--HIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNV 172

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             +SCG  HT                +T+ G L+ WG G  G LG+G    R  P  V  
Sbjct: 173 VTISCGANHTLV--------------TTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIF 218

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMGSAAY-----------GQLGV-PVADGLVPTR 513
             D  I + A G   S+AL   G++++ G               G+LG+        P  
Sbjct: 219 PQDTFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNL 278

Query: 514 VDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLK 571
           +  EI +++ V +++CG  H A L     VYTWG    G+LG G+   +   PT+V  LK
Sbjct: 279 I--EIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLK 336

Query: 572 DKQVKRVVCG 581
              + +V CG
Sbjct: 337 GIHIIQVSCG 346



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 138/333 (41%), Gaps = 42/333 (12%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP-------QLIEILSGVNV 298
           +  IACG+ H + VT  G +FSWG    G+LGHG       P         I + +G++ 
Sbjct: 529 ITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAGIDN 588

Query: 299 ELVACGEYHTCAVT-RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
               C   H   +    G L+ +G  T     LG     +   PR+V  N+ G+H   ++
Sbjct: 589 SGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREV--NITGVH--SVA 644

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  H+  +TS G L+  G GS G LG G+  ++    +V+T    +   V  G  H+ A
Sbjct: 645 LGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTNSFTFVQVKTDH--KFVAVGAGASHSLA 702

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
           + +  D              L+ WG+G          EP +     +      +  +A  
Sbjct: 703 ISMEND--------------LYGWGEGKYLTFDEDVLEPTIINTIPSTTGQAKVVALAVA 748

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPV-----ADGLV----PTRVDGEIAESFVEEVAC 528
            + S+ L+ SG++   G  +YGQLGV +     A+  +    P  V G I       VA 
Sbjct: 749 ANHSLVLSQSGNLSGFGDNSYGQLGVFLSMKSSANNFIKMPLPVNVQGNIV-----CVAT 803

Query: 529 GAYHVAALTSTSKVYTWGKGANGQLGHGDKDNR 561
             Y  +        ++WG   + +LG G+  ++
Sbjct: 804 SRYFSSCSNLGGDAFSWGLAKDHRLGIGETKSK 836



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)

Query: 164 PDNSNDRSSAAETFR-ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRV 222
           PD+ ++  +    F  I  S  + S SH +  +D    G ++++G     G LG GE+  
Sbjct: 570 PDSVSNIENCINVFAGIDNSGCICSVSHENMMKD--EYGTLWVFGSSTC-GKLGLGENMT 626

Query: 223 GYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA 282
                  +  + P+ V  T    VH++A G  H++ +T  G +++ G  SGGRLG G   
Sbjct: 627 -------SAVMTPREVNIT---GVHSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTT 676

Query: 283 DVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR 342
           +      +++ +      V  G  H+ A++   DLY WG+G Y   L      +   I  
Sbjct: 677 N--SFTFVQVKTDHKFVAVGAGASHSLAISMENDLYGWGEGKY---LTFDEDVLEPTIIN 731

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG--------HGDHISTSIP 394
            +        +  ++    H+ V++ +G+L  FGD S+G LG          + I   +P
Sbjct: 732 TIPSTTGQAKVVALAVAANHSLVLSQSGNLSGFGDNSYGQLGVFLSMKSSANNFIKMPLP 791

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
             V+                    +V   +S    S S   G  F+WG     RLG G+ 
Sbjct: 792 VNVQ------------------GNIVCVATSRYFSSCSNLGGDAFSWGLAKDHRLGIGET 833

Query: 455 EPRL 458
           + ++
Sbjct: 834 KSKI 837



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 81/211 (38%), Gaps = 37/211 (17%)

Query: 408 VSCGVWHTAAVVVATDSSSSSPS--------GSTSCGKLFTWGDGDKGRLGHG-DKEPRL 458
           +S G+ H+  +     S++SS S         + S   + +WG      LG G +     
Sbjct: 20  ISLGINHSLCISRTNASANSSRSRKKSDDGKQTASYLNVLSWGKVPFNCLGQGVEVNTSE 79

Query: 459 FPECVAPLIDENICQVACGHDLSVALTTS-------GHVYTMGSAAYGQLGV-------- 503
           FP  +       + QV+CG   S  L  S       G V+T G    G+LG         
Sbjct: 80  FPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEI 139

Query: 504 ------------PVADGLVPTRVDGEIA-ESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
                       P     VP  V   I   + V  ++CGA H    T+   +Y WG GA+
Sbjct: 140 ISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGANHTLVTTADGYLYAWGVGAH 199

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           G LG+G   NR  P  V F +D  + +   G
Sbjct: 200 GVLGNGSVANRYIPVKVIFPQDTFISKCAAG 230


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 155/363 (42%), Gaps = 46/363 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVN----VELVACGEYHTCAVTRSGDLYTW 320
           +FS+G+ + G L  G   D S P  ++ L  +N    V  VACG   T  +  +GD++T 
Sbjct: 32  LFSFGQNTYGELALGDTNDRSTPTRVD-LGRINDTKHVVDVACGNEQTTILFENGDVFTC 90

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS--YISCGLWHTAVVTSAGHLFTFGDG 378
           G        +G   +V      + S  L   H    +   G  H A + + G L+T G  
Sbjct: 91  GYNDSGQCAIGTTERVPSL---RFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFN 147

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             G LG G   + +    VE L G R   V+C  +HTA V+                G L
Sbjct: 148 MRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVM--------------DNGDL 193

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
              G  D G+LG GD    L P  V       +  VACG   +VA    G V   G   +
Sbjct: 194 HACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDH 253

Query: 499 GQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           GQLG+     PV   L+PTR+   +  + V +++CG +H A +T    VYT+G+   GQL
Sbjct: 254 GQLGLDRVSEPV---LLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQL 310

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFGFRR 613
           G G K +   PT V+ L   ++ +V CG       C H    S D  V       F F R
Sbjct: 311 GLGHKLHMARPTPVESLSRMRITQVACG-------CYHTLALSDDGKV-------FPFGR 356

Query: 614 KRH 616
             H
Sbjct: 357 NNH 359



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 158/336 (47%), Gaps = 25/336 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN-VELVAC- 303
           V ++ACG     ++ + G++F+ G    G+   G    V   +    LS  + V L +  
Sbjct: 68  VVDVACGNEQTTILFENGDVFTCGYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGN 127

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           G  H  A+  +G LYT G   +N  G LG G+  +      V   L G  +  ++C  +H
Sbjct: 128 GSEHLAALCANGFLYTVG---FNMRGQLGLGTATTVTEATLVE-ELAGKRVVDVACSYFH 183

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           TA+V   G L   G   +G LG GDH    +PR V+         V+CG  +T A     
Sbjct: 184 TAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVA----- 238

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENIC-QVACGHDL 480
                    S   G +  +G  D G+LG     EP L P  +AP +D  +  Q++CG+  
Sbjct: 239 ---------SLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHH 289

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTST 539
           +  +T  G VYT G   YGQLG+     +  PT V+  ++   + +VACG YH  AL+  
Sbjct: 290 TAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVE-SLSRMRITQVACGCYHTLALSDD 348

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
            KV+ +G+  +GQLG     +  SP L+  L++K V
Sbjct: 349 GKVFPFGRNNHGQLGLETSMDCLSPQLISTLRNKPV 384



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 38/286 (13%)

Query: 211 ANGFLGGGEHRVGYSFSRQ---------TDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           ANGFL    + VG++   Q         T+A L   VE      V ++AC   H  +V  
Sbjct: 137 ANGFL----YTVGFNMRGQLGLGTATTVTEATL---VEELAGKRVVDVACSYFHTAIVMD 189

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
            G++ + G    G+LG G  +    P+ ++      V  VACG+++T A  R G +  +G
Sbjct: 190 NGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFG 249

Query: 322 DGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
               + G LG   +VS    +P +++  LD   +  +SCG  HTA+VT  G ++TFG   
Sbjct: 250 KN--DHGQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRND 306

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LG G  +  + P  VE+L  +R T+V+CG +HT A+              +  GK+F
Sbjct: 307 YGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLAL--------------SDDGKVF 352

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
            +G  + G+LG       L P+ ++ L ++    VA G   SV L 
Sbjct: 353 PFGRNNHGQLGLETSMDCLSPQLISTLRNK---PVAAGFYHSVCLV 395



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 128/294 (43%), Gaps = 26/294 (8%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G+ H   +   G +++ G    G+LG G    V+   L+E L+G  V  VAC  +HT  V
Sbjct: 128 GSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIV 187

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
             +GDL+  G   Y  G LG G      +PR V        L+ ++CG  +T      G 
Sbjct: 188 MDNGDLHACGCNDY--GQLGMGDHSGHLVPRPVDYFFRHPVLA-VACGQHYTVASLRDGG 244

Query: 372 LFTFGDGSFGALGHGDHISTSI---PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +  FG    G LG  D +S  +    R    L      ++SCG  HTA V          
Sbjct: 245 VVAFGKNDHGQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIV---------- 293

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
               T  G ++T+G  D G+LG G K     P  V  L    I QVACG   ++AL+  G
Sbjct: 294 ----TEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDG 349

Query: 489 HVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
            V+  G   +GQLG+  + D L P      I+    + VA G YH   L  T K
Sbjct: 350 KVFPFGRNNHGQLGLETSMDCLSPQL----ISTLRNKPVAAGFYHSVCLVGTPK 399


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE---ILSGVNVELVACGEYH 307
            G R  V+   + E++SWG  +  +LG GR  D + PQL+    + S   +  ++CG  H
Sbjct: 216 VGLREVVVDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAH 275

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
             A+T  G + TWG G  NSG LG G  +S   P+ V   L    ++++S G  H+  V+
Sbjct: 276 VIALTAGGGVLTWGRG--NSGQLGLGDMISSLHPKPVM-RLGSYFITHVSAGWSHSGFVS 332

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G L+T GDGSFG LGHGD+     P EV         +++CG+ H+ A+V        
Sbjct: 333 DEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKG------ 386

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTT 486
                +S  +++ +G G +G+LG   K   +  P   + L    I  +A G D S AL+ 
Sbjct: 387 -----SSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSA 441

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            GH+YT G           +D   P  +    + S   +VA G  H   LT   ++Y  G
Sbjct: 442 EGHLYTWGRGFKS-----TSDVYSPQHLP---SPSSFSKVALGWNHALVLTDEGELYMLG 493

Query: 547 KGANGQL 553
              +G L
Sbjct: 494 GKHHGAL 500



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 176/409 (43%), Gaps = 56/409 (13%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES---TMALDVHNIACGARHAVL 258
           +++ WG G  +  LG G         R  D  LP+ V +   + A  +  ++CG  H + 
Sbjct: 229 ELWSWGAG-TDAQLGTG---------RLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIA 278

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T  G + +WG  + G+LG G      HP+ +  L    +  V+ G  H+  V+  G LY
Sbjct: 279 LTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLY 338

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV---TSAGHLFTF 375
           T GDG++  G LGHG       P +V    D  H+  I+CG+ H+  +   +S   ++ F
Sbjct: 339 TCGDGSF--GQLGHGDYQLRCFPEEVLFFSDK-HVDKIACGMRHSLALVKGSSGEQVYGF 395

Query: 376 GDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
           G G  G LG    I T ++P     L       ++ G  H+AA+              ++
Sbjct: 396 GAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAAL--------------SA 441

Query: 435 CGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMG 494
            G L+TWG G K         P+  P         +  +VA G + ++ LT  G +Y +G
Sbjct: 442 EGHLYTWGRGFKST--SDVYSPQHLPS------PSSFSKVALGWNHALVLTDEGELYMLG 493

Query: 495 SAAYGQLGVPVADGLVPTRVDGEIAESF----------VEEVACGAYHVAALTSTSKVYT 544
              +G L        + +       ++F          V ++A GA H   +T    V T
Sbjct: 494 GKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKT 553

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDF-LKDKQVK---RVVCGLNFTAIIC 589
           WG G +GQLG GD  +  +P  V+  LK +      +V CG  FT  + 
Sbjct: 554 WGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVA 602



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 28/224 (12%)

Query: 213 GFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEES 272
           GF  G   ++G S   QT   LP    +  A ++  IA G  H+  ++ +G +++WG   
Sbjct: 394 GFGAGKRGQLGISKKIQT-VNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWGR-- 450

Query: 273 GGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH 332
               G    +DV  PQ   + S  +   VA G  H   +T  G+LY  G   +  G L  
Sbjct: 451 ----GFKSTSDVYSPQ--HLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHH--GALSD 502

Query: 333 GSKVSCWIPRKVSGN-----------LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              ++    + + G+           L GI +  I+ G  H+ +VT  G + T+G G  G
Sbjct: 503 SEMLNSM--KSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHG 560

Query: 382 ALGHGDHISTSIPREVETLRGLRTT----RVSCGVWHTAAVVVA 421
            LG GD    + P+ V     L +T    +V CG   T AV  +
Sbjct: 561 QLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVATS 604


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 23/360 (6%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH-GREADVS 285
           S  T  +    +E      V  ++    H+  V + G++ + G+ S    GH      + 
Sbjct: 146 SETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIF 205

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+L+E L G   + VA G + T  ++R G  YT G  T+  G LGHG  +   +P+ V 
Sbjct: 206 RPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVE 263

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GL 403
                  +  I+ G  +   VT  G +++FG GS   LGHG+      PR ++  +  G+
Sbjct: 264 FLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              RVS G  H     VA DS+          G+++TWG G  G LGHGD+  ++ P+ +
Sbjct: 324 HILRVSAGDEHA----VALDSN----------GRVYTWGKGYCGALGHGDENDKITPQVL 369

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAE 520
             L +    QV      +  L   G +Y  G   +G LG P   V+D ++  RV   +  
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V +V+ G YH   +T   +++ +G     QLGH        PT + FL   + +  +C
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI-FLHCGRSRSRLC 488



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 33/318 (10%)

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T Q E+F+  E +  RL    ++      ++E   G     +A G+YHT  +  S    
Sbjct: 76  LTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGK--MQIATGKYHTLLINNS---K 130

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +  G   SG+L HGS+ +  +            ++ +S    H+A V  +G + T GD 
Sbjct: 131 VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDN 190

Query: 379 SFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           S    GH D  S  I  P+ VE L+G    +V+ G+  T  V ++ +            G
Sbjct: 191 SSHCCGHLD-TSRPIFRPKLVEALKGTPCKQVAAGLHFT--VFLSRE------------G 235

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYTMGS 495
             +T G    G+LGHGD   R  P+ V  L     + Q+A G    +A+T  G VY+ GS
Sbjct: 236 HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGS 295

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESF------VEEVACGAYHVAALTSTSKVYTWGKGA 549
            +   LG     G     +   + ++F      +  V+ G  H  AL S  +VYTWGKG 
Sbjct: 296 GSNFCLG----HGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY 351

Query: 550 NGQLGHGDKDNRNSPTLV 567
            G LGHGD++++ +P ++
Sbjct: 352 CGALGHGDENDKITPQVL 369



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 89/194 (45%), Gaps = 26/194 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH--NIACGARHAVL 258
           G V+ +G G +N  LG GE         Q D L P+ +++     +H   ++ G  HAV 
Sbjct: 288 GSVYSFGSG-SNFCLGHGE---------QQDELQPRVIQAFKRKGIHILRVSAGDEHAVA 337

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +   G +++WG+   G LGHG E D   PQ++       V L  C     CA  R   + 
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVL-------VNLNNCLAVQVCARKRKTFVL 390

Query: 319 TWGDGTYNSGLLGHGS------KVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
             G   Y  G +G GS       VS  + R +V   L    +S +S GL+HT VVT  G 
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGR 450

Query: 372 LFTFGDGSFGALGH 385
           +F FGD     LGH
Sbjct: 451 IFGFGDNERAQLGH 464



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 16/222 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I+ G +HT ++ ++  +++ G    G L HG           ET + +  T +       
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGS----------ETTQCVAFTPIEFPFPAQ 164

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQV 474
            A V AT + S+    S   G++ T GD      GH D    +F P+ V  L      QV
Sbjct: 165 VAQVSATQNHSAFVLQS---GQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G   +V L+  GH YT GS  +GQLG     D  VP  V+       V ++A G  +V
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
            A+T    VY++G G+N  LGHG++ +   P ++   K K +
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS G V+ WG+G   G LG G+         + D + P+ + +        +    R  
Sbjct: 338 LDSNGRVYTWGKGYC-GALGHGD---------ENDKITPQVLVNLNNCLAVQVCARKRKT 387

Query: 257 VLVTKQGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
            ++ + G ++ +G    G LG    G    V  P+++E L    V  V+ G YHT  VT+
Sbjct: 388 FVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ 447

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            G ++ +GD       LGH S   C  P ++
Sbjct: 448 RGRIFGFGDN--ERAQLGHDSLRGCLEPTEI 476


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 36/314 (11%)

Query: 263 GEIFSWGEESGGRLGHG-READVSH------------PQLIEILSGVNVELVACGEYHTC 309
           G +F+WG  + GRLG    E ++ +            P +++  + + +  V+CG   T 
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY----ISCGLWHTAV 365
           A+++ G +Y+WG G  NSG LG G +     P  +    +G HL      I+CG  H   
Sbjct: 266 ALSQEGHVYSWGLG--NSGGLGQGEQNVSMTPNIIKYQKNG-HLFQNIKDIACGSNHVLS 322

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +   G ++++G+G  G LGHGD    +IP+E+  LR  +   +  G   +AA+ +  +  
Sbjct: 323 LDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNE-- 380

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                       LF WG G  GRLG G     L P  +  L D+ +  +A G + S+ + 
Sbjct: 381 ------------LFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428

Query: 486 TSGHVYTMGSAAYGQLGVPVA--DGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
            +G     GS+  G+LG+  A        +    + +  + ++A G +H  ALT   ++Y
Sbjct: 429 RNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIY 488

Query: 544 TWGKGANGQLGHGD 557
           ++G   +G+LG+ +
Sbjct: 489 SFGNSKDGKLGYDE 502



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 30/326 (9%)

Query: 201 GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLP---KAVESTMALDVHNIACGARHA 256
           G VF WG  +  G LG     +   +  ++ + L+P     V+   ++ +  ++CG    
Sbjct: 206 GIVFTWGV-VNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFT 264

Query: 257 VLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSG----VNVELVACGEYHTCAVT 312
           + ++++G ++SWG  + G LG G +     P +I+         N++ +ACG  H  ++ 
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLD 324

Query: 313 RSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHL 372
             G +Y+WG+G    G LGHG +    IP+++ G L    +  I  G   +A ++    L
Sbjct: 325 HQGIVYSWGNG--QGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNEL 381

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           F +G G  G LG G   +   P  +E L+  +   ++ G  H+  ++             
Sbjct: 382 FIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL------------- 428

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLF--PECVAPLIDENICQVACGHDLSVALTTSGHV 490
              GK   WG    G+LG      R F  P+ +  L  E + Q+A G   S+ALT +G +
Sbjct: 429 -RNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEI 487

Query: 491 YTMGSAAYGQLGVPVADG--LVPTRV 514
           Y+ G++  G+LG     G   +P ++
Sbjct: 488 YSFGNSKDGKLGYDEIKGNVQIPRKI 513



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 36/287 (12%)

Query: 314 SGDLYTWGDGTYNSGLLGHG----------SKVSCWIPRKVS-GNLDG-IHLSYISCGLW 361
           +G ++TWG    N G LG             K +  IP K S    D  I +  +SCG  
Sbjct: 205 NGIVFTWG--VVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNS 262

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG----LRTTRVSCGVWHTAA 417
            T  ++  GH++++G G+ G LG G+   +  P  ++  +          ++CG  H   
Sbjct: 263 FTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNH--- 319

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            V++ D            G +++WG+G  GRLGHGD+     P+ +  L    I  +  G
Sbjct: 320 -VLSLDHQ----------GIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAG 368

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
              S A++    ++  G   +G+LG    A+ L P  ++ ++ +  VE++A G+ H   +
Sbjct: 369 EGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLE-DLKDQKVEDIALGSNHSLCI 427

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRN--SPTLVDFLKDKQVKRVVCG 581
               K   WG   +G+LG     +RN   P  +  L  +++ ++  G
Sbjct: 428 LRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAG 474



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 156/383 (40%), Gaps = 66/383 (17%)

Query: 242  MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVEL 300
            + + + +++ G  H + VT +G  F WG    G+LG GR +  VS P  I+ L    + +
Sbjct: 673  VQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIM 732

Query: 301  VACGEYHTCAVTRSGDLYTWG------------------------DGTYNSGLLGHGSKV 336
             A GE H+  ++  G++   G                        D  Y+        + 
Sbjct: 733  TASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIET 792

Query: 337  SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS------AGHLFTFGDGSFGALGHGDHIS 390
               +  K+   L+ I   +I+ G  H+  + +      A  LFT+G G  G  GHG   +
Sbjct: 793  KIELTPKIIKGLESI--GFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQN 850

Query: 391  TSIPR--EVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
              +P+  +V  L+  +  + SCG  HT    +A D++               W  G K  
Sbjct: 851  DYLPQIVKVPVLKDTKFIQASCGSKHT----IALDTTGH------------IWFFGYKPS 894

Query: 449  LGHGD--KEPRLFPECVAP--LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
            +G  D   E +  P  +     I E    ++ G + ++A+T SG VY  G     ++   
Sbjct: 895  VGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTKINSS 954

Query: 505  VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG--------HG 556
              + L   +V+ E         ACGA H   + +    YTWG   NG+ G          
Sbjct: 955  HKEYLYFDQVENEEKAVLT---ACGANHSVLIDTKGVPYTWGFVGNGRCGLKLEKDDAQQ 1011

Query: 557  DKDNRNSPTLVDFLKDKQVKRVV 579
            ++++ ++PT++ F+K    K ++
Sbjct: 1012 EQESLSAPTVIYFMKTLFQKEII 1034



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 25/176 (14%)

Query: 436 GKLFTWGDGDKGRLGHG----------DKEPRLFP------ECVAPLIDENICQVACGHD 479
           G +FTWG  ++GRLG             K   L P      +  A +I   I +V+CG+ 
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASII---IIKVSCGNS 262

Query: 480 LSVALTTSGHVYTMGSAAYGQLG-----VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            ++AL+  GHVY+ G    G LG     V +   ++  + +G + ++ ++++ACG+ HV 
Sbjct: 263 FTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQN-IKDIACGSNHVL 321

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +L     VY+WG G  G+LGHGD+   N P  +  L+  ++  +  G   +A I +
Sbjct: 322 SLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISI 377



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRG----LRTTRVSCGVWHTAAVVVATDSS 425
           G +FT+G  + G LG    I+ +  +E+E +      L   + S   +  + +++     
Sbjct: 206 GIVFTWGVVNEGRLG----IALN-EKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCG 260

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLS 481
           +S     +  G +++WG G+ G LG G++   + P  +       + +NI  +ACG +  
Sbjct: 261 NSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHV 320

Query: 482 VALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTS 540
           ++L   G VY+ G+   G+LG     G  +P  + G + +  +  +  G    AA++  +
Sbjct: 321 LSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKN 379

Query: 541 KVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
           +++ WG G +G+LG G   N   P +++ LKD++V+ +  G N +  I 
Sbjct: 380 ELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 153/439 (34%), Gaps = 114/439 (25%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLI--- 290
           PK + +     ++ IA G  H++ +T+ GEI+S+G    G+LG+   + +V  P+ I   
Sbjct: 457 PKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNC 516

Query: 291 --------------------------------EILSGVNVELVACGEYHTCAVTRSGDLY 318
                                           + L G  V    CG   T  +   G +Y
Sbjct: 517 PIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMY 576

Query: 319 TWGDGTYNSGLLGH----GSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
             G   Y  G LG     G K        ++ N DG      + G    A          
Sbjct: 577 VCGSNKY--GQLGFSKRAGGKDKDGNKMLINSNNDG------NQGGMSGANDNDNDDDDN 628

Query: 375 FGDGSFGALGHGDHISTSIPREVETLRGL------------------RTTRVSCGVWHTA 416
              G F      D +   + +++  L+ L                  +   VS G +H  
Sbjct: 629 GIGGGFLQQNSDDVLPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVL 688

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQVA 475
           AV              T  G  F WG  D G+LG G K+  +  P  +  L D+ I   A
Sbjct: 689 AV--------------THEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTA 734

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPV------------ADGLVPTRVDGEIAESFV 523
            G   S+ L+  G V   G   +G+LG+ +             D +       ++ E+ +
Sbjct: 735 SGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKI 794

Query: 524 EE-------------VACGAYHVAALTSTS------KVYTWGKGANGQLGHGDKDNRNSP 564
           E              +A G  H  A+ +        K++TWG G +GQ GHG   N   P
Sbjct: 795 ELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLP 854

Query: 565 TLVD--FLKDKQVKRVVCG 581
            +V    LKD +  +  CG
Sbjct: 855 QIVKVPVLKDTKFIQASCG 873



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 511 PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNS-PTLVDF 569
           P  +  +  +  ++ V+ G +HV A+T     + WG+  NGQLG G KD   S PT +  
Sbjct: 665 PLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKS 724

Query: 570 LKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
           L+DK +     G + +       ++S +   +CS   N FG
Sbjct: 725 LQDKVIIMTASGESHSL------FLSDLGEVLCSG-FNEFG 758



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 20/178 (11%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNI--ACGARHAVLVT 260
           +F WG G  +G  G G  +  Y         LP+ V+  +  D   I  +CG++H + + 
Sbjct: 832 LFTWGCG-WHGQTGHGSWQNDY---------LPQIVKVPVLKDTKFIQASCGSKHTIALD 881

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN--VELVACGEYHTCAVTRSGDLY 318
             G I+ +G +    +    +     P  +E  S +    + ++ GE H  AVT+SG +Y
Sbjct: 882 TTGHIWFFGYKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVY 941

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
            +G  T N+ +  + S        +V      +     +CG  H+ ++ + G  +T+G
Sbjct: 942 GFGKNT-NTKI--NSSHKEYLYFDQVENEEKAV---LTACGANHSVLIDTKGVPYTWG 993


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG-DLYTWGDG 323
           + SWG    G+LGHG   D   P  +    G ++  V CG  +T A ++SG D+Y+WG G
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 184

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
            +  G LGHG     +IP  +   L G+ +  ISCG  H   VT    + ++G    G L
Sbjct: 185 DF--GRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 384 GHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGD 443
           G G    + +P+++    G+R   V+ G  H+ A+              T  G L+ WG 
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI--------------TEDGDLYGWGW 287

Query: 444 GDKGRLGHGDKEPRLFPECVAPLID-ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           G  G LG GD   RL PE V   ID + I  V+CG   ++++++SG +YT G + YGQLG
Sbjct: 288 GRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLG 345

Query: 503 -VPVADGLVPTRVDGEIAESFVEEV 526
                D LVP +V   +++  + +V
Sbjct: 346 HGDFEDCLVPRKVQA-LSDKLISQV 369



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 29/270 (10%)

Query: 206 WGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQG-E 264
           WG G  +G LG G+           D LLP  + +    D+ ++ CGA + V  +K G +
Sbjct: 128 WGRG-EDGQLGHGD---------TDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 177

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           ++SWG    GRLGHG  +D+  P  I  L G+ ++ ++CG+ H  AVT    + +W  G 
Sbjct: 178 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSW--GR 235

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
             +G LG G+     +P+K+    +GI +  ++ G  H+  +T  G L+ +G G +G LG
Sbjct: 236 NQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLG 294

Query: 385 HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
            GD     IP +V  + G +   VSCG  HT ++              +S G L+T G  
Sbjct: 295 LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISI--------------SSSGGLYTHGWS 339

Query: 445 DKGRLGHGDKEPRLFPECVAPLIDENICQV 474
             G+LGHGD E  L P  V  L D+ I QV
Sbjct: 340 KYGQLGHGDFEDCLVPRKVQALSDKLISQV 369



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 14/199 (7%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           DV+ WG G   G LG G+          +D  +P  + +   L +  I+CG  H + VT 
Sbjct: 177 DVYSWGWG-DFGRLGHGD---------PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 226

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           + ++ SWG    G LG G   D   PQ I    G+ +++VA G  H+ A+T  GDLY WG
Sbjct: 227 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 286

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G Y  G LG G      IP KV  N+DG  +  +SCG  HT  ++S+G L+T G   +G
Sbjct: 287 WGRY--GNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 342

Query: 382 ALGHGDHISTSIPREVETL 400
            LGHGD     +PR+V+ L
Sbjct: 343 QLGHGDFEDCLVPRKVQAL 361



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 21/263 (7%)

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH-LFTFGD 377
           +WG G    G LGHG      +P K+S   DG  +  ++CG  +T   + +G  ++++G 
Sbjct: 127 SWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           G FG LGHGD     IP  +  L+GLR  ++SCG  H  AV +                K
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMEN--------------K 229

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           + +WG    G LG G  +    P+ +       I  VA G + SVA+T  G +Y  G   
Sbjct: 230 VLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGR 289

Query: 498 YGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHG 556
           YG LG+    D L+P +V+  I    +  V+CG  H  +++S+  +YT G    GQLGHG
Sbjct: 290 YGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 347

Query: 557 DKDNRNSPTLVDFLKDKQVKRVV 579
           D ++   P  V  L DK + +V+
Sbjct: 348 DFEDCLVPRKVQALSDKLISQVI 370



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 16/216 (7%)

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           ++G G  G LGHGD     +P ++    G     V+CG  +T A              S 
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVAR-------------SK 173

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           S   +++WG GD GRLGHGD      P  +  L    I Q++CG    +A+T    V + 
Sbjct: 174 SGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSW 233

Query: 494 GSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
           G    G+LG+    D  VP ++        ++ VA GA H  A+T    +Y WG G  G 
Sbjct: 234 GRNQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 292

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           LG GD ++R  P  V+   DK V  V CG   T  I
Sbjct: 293 LGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISI 327



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
            S + V +WG+G +GQLGHGD D+R  PT +     + +  V CG ++T 
Sbjct: 120 VSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV 169



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 18/123 (14%)

Query: 173 AAETFRISLSSVVSSSSHGSA-HEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTD 231
           A E  RI +  V + + H  A  ED    GD++ WG G   G LG G+           D
Sbjct: 257 AFEGIRIKM--VAAGAEHSVAITED----GDLYGWGWG-RYGNLGLGD---------TND 300

Query: 232 ALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
            L+P+ V +     +  ++CG RH + ++  G +++ G    G+LGHG   D   P+ ++
Sbjct: 301 RLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQ 359

Query: 292 ILS 294
            LS
Sbjct: 360 ALS 362


>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
           congolense IL3000]
          Length = 1149

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 171/401 (42%), Gaps = 59/401 (14%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G  H + +T  G ++SWG E  GRLGHG   +    ++I+ LS   +   +CG +HT  +
Sbjct: 559 GPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAVL 618

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T+ G +Y +G+ ++  G LG   +    +P  V      I    +SCG  HT ++   G 
Sbjct: 619 TKHGQVYVFGENSF--GQLGLKGQQPRLLPEVVPLPKRAI---VVSCGREHTCILLEDGD 673

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA---VVVATDSSSSS 428
           L   G      +G G     S+PR +  L+      V+ G  H  A   +   T ++  +
Sbjct: 674 LMACGSVRSSGVGVGFGARFSVPRRI--LQNFLIMSVASGDLHAIASGTLRTMTLTAVQT 731

Query: 429 PSGS-------------------------------TSCGKLFTWGDGDKGRLGHGDKEP- 456
           P GS                                  G+ F  G G  G+LG GD  P 
Sbjct: 732 PQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLGSGDDTPA 791

Query: 457 --RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL----- 509
              LF   V P   E++C V CG   ++A+ +SG +Y+ G   +GQLG  +A  L     
Sbjct: 792 QRNLFRRVVVPDF-EDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESVF 850

Query: 510 VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
            P  +      S V +VACG   V ALT   +VYTWG+ A    G+G +     P  +  
Sbjct: 851 TPKEISVVKTLSQVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNGVEKFFLCPKRLAS 910

Query: 570 LKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
           L+D  +  V  G    A +       S DH++ +  + P G
Sbjct: 911 LQD--ISAVAAGDRHAAAL-------SYDHTIYAWGNGPVG 942



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 162/395 (41%), Gaps = 58/395 (14%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEES--GGRLGHGREADVSHP------QLIEILSGV 296
           +V ++ACG+ +A +    G + +WG  +    ++   +  D   P      + I +    
Sbjct: 490 EVVDVACGSFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPF 549

Query: 297 NVELVA--CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
           N ++VA   G +H  A+T SG +Y+W  G   +G LGHG   +    R +   L    + 
Sbjct: 550 NKKVVALRAGPFHCLAITSSGAVYSW--GMERNGRLGHGDNKNEERMRVIDA-LSSHVIV 606

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
             SCG +HTAV+T  G ++ FG+ SFG LG        +P  V   +  R   VSCG  H
Sbjct: 607 DASCGCFHTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREH 664

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLF-----------------TWGDGDKGRLGHGDKEPR 457
           T  ++   D  +     S+  G  F                 +   GD   +  G     
Sbjct: 665 TCILLEDGDLMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTM 724

Query: 458 LFPECVAPL---IDENICQ------------VACGHDLSVALTTSGHVYTMGSAAYGQLG 502
                  P    +D+N+ +            +  G D +V L  +G  + +G  + GQLG
Sbjct: 725 TLTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG 784

Query: 503 ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
                P    L    V  +  +  V  V CG     A+ S+  +Y+WG   +GQLGHG  
Sbjct: 785 SGDDTPAQRNLFRRVVVPDFED--VCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLA 842

Query: 559 ----DNRNSPTLVDFLKD-KQVKRVVCGLNFTAII 588
               ++  +P  +  +K   QV +V CG  F   +
Sbjct: 843 VELGESVFTPKEISVVKTLSQVIQVACGGTFVVAL 877



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 177/452 (39%), Gaps = 106/452 (23%)

Query: 165 DNSNDRSSAAETFRI--SLSS-VVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEH 220
           DN N+     E  R+  +LSS V+  +S G  H       G V+++GE  + G LG    
Sbjct: 587 DNKNE-----ERMRVIDALSSHVIVDASCGCFHTAVLTKHGQVYVFGEN-SFGQLG---- 636

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
                   Q   LLP+ V       V  ++CG  H  ++ + G++ + G      +G G 
Sbjct: 637 -----LKGQQPRLLPEVVPLPKRAIV--VSCGREHTCILLEDGDLMACGSVRSSGVGVGF 689

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCA------------------------------ 310
            A  S P+   IL    +  VA G+ H  A                              
Sbjct: 690 GARFSVPR--RILQNFLIMSVASGDLHAIASGTLRTMTLTAVQTPQGSPVDDNMSKLNEM 747

Query: 311 ------------------VTRSGDLYTWGDGTYNSGLLGHGSKVSC---WIPRKVSGNLD 349
                             +  +G+ +  G G+  +G LG G           R V  + +
Sbjct: 748 VKRHGLRSLCVGKDFAVILAETGEAFAIGCGS--NGQLGSGDDTPAQRNLFRRVVVPDFE 805

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI----STSIPREVETLRGL-R 404
            +    + CG      + S+G L+++G  + G LGHG  +    S   P+E+  ++ L +
Sbjct: 806 DV--CAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTPKEISVVKTLSQ 863

Query: 405 TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF--PEC 462
             +V+CG       VVA           T CG+++TWG+      GHG+   + F  P+ 
Sbjct: 864 VIQVACG----GTFVVAL----------TQCGEVYTWGEA--AFCGHGNGVEKFFLCPKR 907

Query: 463 VAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF 522
           +A L  ++I  VA G   + AL+    +Y  G+   G  G   A  +VPT V        
Sbjct: 908 LASL--QDISAVAAGDRHAAALSYDHTIYAWGNGPVGNGGA--AGVMVPTPVALNFVHP- 962

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           V ++ CG  +   +T    +Y WG   +GQ G
Sbjct: 963 VRQLFCGQVNTFVITDVGDLYVWGLNTSGQCG 994



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 106/489 (21%), Positives = 169/489 (34%), Gaps = 149/489 (30%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE- 291
           L+P  +   + + V + +CGA     +T   ++FS G +   +LG G+  ++    ++  
Sbjct: 362 LIPTRM--AIPVPVLSFSCGAYSCYFLTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRH 419

Query: 292 -----------ILSGVNVELVACGEYHTCAV-TRSGDLYTWGDGTYNS----GLLGHGSK 335
                      + SG ++  +  G     A+  +S  +Y WG  ++      G L   + 
Sbjct: 420 GEGKYRLFRVPLRSGDHICKLTAGSAFAAAIGLQSRRMYLWGQNSFGQCLMEGSLTVSTP 479

Query: 336 VSCWIPRKVSGNLD--------GIHLSYISCGLW-------------------------- 361
           V+  IP + S  +D         I  S  S G W                          
Sbjct: 480 VAVDIPGQYSEVVDVACGSFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKC 539

Query: 362 ----------------------HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET 399
                                 H   +TS+G ++++G    G LGHGD+ +    R ++ 
Sbjct: 540 AKTINLFKPFNKKVVALRAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDA 599

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L        SCG +HTA +              T  G+++ +G+   G+LG   ++PRL 
Sbjct: 600 LSSHVIVDASCGCFHTAVL--------------TKHGQVYVFGENSFGQLGLKGQQPRLL 645

Query: 460 PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEI 518
           PE V PL    I  V+CG + +  L   G +   GS     +GV       VP R+   +
Sbjct: 646 PE-VVPLPKRAIV-VSCGREHTCILLEDGDLMACGSVRSSGVGVGFGARFSVPRRI---L 700

Query: 519 AESFVEEVACGAYHVAA------------------------------------------- 535
               +  VA G  H  A                                           
Sbjct: 701 QNFLIMSVASGDLHAIASGTLRTMTLTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGK 760

Query: 536 -----LTSTSKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                L  T + +  G G+NGQLG GD     RN    V     + V  V CG +F   I
Sbjct: 761 DFAVILAETGEAFAIGCGSNGQLGSGDDTPAQRNLFRRVVVPDFEDVCAVDCGFSFAIAI 820

Query: 589 ----CLHKW 593
                L+ W
Sbjct: 821 GSSGALYSW 829



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 25/166 (15%)

Query: 180  SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
            +LS V+  +  G+        G+V+ WGE    G   G E             L PK + 
Sbjct: 860  TLSQVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNGVEKFF----------LCPKRLA 909

Query: 240  STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVE 299
            S    D+  +A G RHA  ++    I++WG    G +G+G  A V  P  + +     V 
Sbjct: 910  SLQ--DISAVAAGDRHAAALSYDHTIYAWGN---GPVGNGGAAGVMVPTPVALNFVHPVR 964

Query: 300  LVACGEYHTCAVTRSGDLYTWG----------DGTYNSGLLGHGSK 335
             + CG+ +T  +T  GDLY WG           G  NS  L  G K
Sbjct: 965  QLFCGQVNTFVITDVGDLYVWGLNTSGQCGALQGAINSSQLAPGRK 1010



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 30/304 (9%)

Query: 315 GDLYTWGD-GTYNSGL-LGHGSKVSCWIPRKVSGNLDGIHLSY------ISCGLWHTAVV 366
           G ++TWG+  +  +G  L   S  + W P + S  L    ++        SCG +    +
Sbjct: 327 GVVFTWGNVASVKTGKKLQLSSPSNSWDPPQGSYTLIPTRMAIPVPVLSFSCGAYSCYFL 386

Query: 367 TSAGHLFTFGDGSFGALGHG---DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           T+   +F+ G+  +  LG G   +  S+S+ R  E    L    +  G      +   T 
Sbjct: 387 TADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRSG----DHICKLTA 442

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGR-LGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
            S+ + +      +++ WG    G+ L  G            P     +  VACG   + 
Sbjct: 443 GSAFAAAIGLQSRRMYLWGQNSFGQCLMEGSLTVSTPVAVDIPGQYSEVVDVACGSFYAA 502

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVA-----DGLVPTRVDG----EIAESFVEEVAC---GA 530
              + G V T G +    L   VA     D   P          + + F ++V     G 
Sbjct: 503 IAFSCGSVGTWGVST--MLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVALRAGP 560

Query: 531 YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           +H  A+TS+  VY+WG   NG+LGHGD  N     ++D L    +    CG   TA++  
Sbjct: 561 FHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAVLTK 620

Query: 591 HKWV 594
           H  V
Sbjct: 621 HGQV 624


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 40/279 (14%)

Query: 233 LLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI 292
           L P  V S     V +++ G  ++  VTK G++F+WG    G+LG G       PQ ++ 
Sbjct: 216 LTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKF 275

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            + V++  V+CG  H   ++  GDL+TWG G +  G LGHG   SC  P+KV    +   
Sbjct: 276 FTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVF--GQLGHGKLKSCLHPKKVLAFSEADQ 333

Query: 353 LSY----ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD--------------------H 388
           L+     ++CG   T  +T  G L++FG G +G LG  +                    H
Sbjct: 334 LNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAH 393

Query: 389 ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
           +  ++P++VE L  ++  +V+CG  HT  +VV  D+             +++WG G  G 
Sbjct: 394 LQYAVPQQVEALASVKVKQVTCGHLHT--IVVTEDND------------VYSWGWGASGC 439

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTS 487
           LG GD++ +L P+ V  L  E +  ++ G   S+ + ++
Sbjct: 440 LGFGDRKFQLVPQRVPALSGEIVSSISAGEKHSLVVRST 478



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 182/423 (43%), Gaps = 81/423 (19%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D L P  +++   + +   ACG  H++ VT+ G+++S+G    G+LGH  + + +HP 
Sbjct: 19  EKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNTAHPN 78

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD---------------GTYNSGLLGHG 333
           +I  L+   +  VACG +H+ A+T +G +Y WG                G      +G  
Sbjct: 79  VITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLEAPSGLIEMKGIGFA 138

Query: 334 SKVSCWIPRKVSGNLDGIHLSY------ISCGLWHTAVVTSAGHLFTFGDGSFGALG--- 384
           S+++    + +S  L G   +Y      IS     +A    A  L T  D  F A     
Sbjct: 139 SRIA---EQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDL-TNKDEEFDAAAGSG 194

Query: 385 --------HGDHISTSI------PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
                    G HI   +      P  V +++  +   +S G  ++AAV            
Sbjct: 195 GDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAV------------ 242

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
             T  GK+FTWG  +KG+LG GD+     P+ V    + +I  V+CG      ++  G +
Sbjct: 243 --TKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDL 300

Query: 491 YTMGSAAYGQLGV-PVADGLVPTRV----DGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
           +T G   +GQLG   +   L P +V    + +     V +VACGA    ALT   +++++
Sbjct: 301 FTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSF 360

Query: 546 GKGANGQLGHGDKDNRNS--------------------PTLVDFLKDKQVKRVVCGLNFT 585
           G G  GQLG  +++                        P  V+ L   +VK+V CG   T
Sbjct: 361 GHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHT 420

Query: 586 AII 588
            ++
Sbjct: 421 IVV 423



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 193/465 (41%), Gaps = 86/465 (18%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           +  S+ G AH       GDV+ +G G   G LG  E         + +   P  + +   
Sbjct: 36  IVMSACGEAHSLAVTEFGDVYSFGRG-REGQLGHPE---------KYNTAHPNVITALAH 85

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWG------------EESGGRL---GHGREADVSHPQ 288
             +  +ACG  H++ +T  G+I+ WG            E   G +   G G  + ++   
Sbjct: 86  ERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLEAPSGLIEMKGIGFASRIAEQS 145

Query: 289 LIEILSG------------VNVELVACGEYHTCAVTRSGDLY-----TWGDGTYNSGLLG 331
           L + LSG             NV   +        +T   + +     + GD + N     
Sbjct: 146 LSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGK 205

Query: 332 HGSKV--SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI 389
           H  K+     +   + G++    +  +S G  ++A VT +G +FT+G    G LG GD  
Sbjct: 206 HIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRW 265

Query: 390 STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL 449
              +P++V+    +    VSCG  H   +              +  G LFTWG G  G+L
Sbjct: 266 FHGLPQQVKFFTNVHIVSVSCGRQHIGVI--------------SDQGDLFTWGLGVFGQL 311

Query: 450 GHGDKEPRLFPECV-----APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           GHG  +  L P+ V     A  +++ + QVACG + ++ALT  G +++ G   YGQLG  
Sbjct: 312 GHGKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGAT 371

Query: 505 VADGL---------------------VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
             +                       VP +V+  +A   V++V CG  H   +T  + VY
Sbjct: 372 EENQYRDWNRGGNGNGNEREAHLQYAVPQQVEA-LASVKVKQVTCGHLHTIVVTEDNDVY 430

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +WG GA+G LG GD+  +  P  V  L  + V  +  G   + ++
Sbjct: 431 SWGWGASGCLGFGDRKFQLVPQRVPALSGEIVSSISAGEKHSLVV 475



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 60/385 (15%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + S+G     +LGH  E D   P +I+ LSG+ + + ACGE H+ AVT  GD+Y++G G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRG- 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
              G LGH  K +   P  ++  L    ++ ++CG +H+  +T  G ++      +G L 
Sbjct: 62  -REGQLGHPEKYNTAHPNVITA-LAHERITRVACGNFHSLALTDTGKIY-----EWGQLH 114

Query: 385 HGDHISTSI--PREVETLRGL-RTTRVSCGVWHTAAVVVATDSSSSSPSGS--------- 432
             D  +  +  P  +  ++G+   +R++     + +  ++ D ++  P+           
Sbjct: 115 EIDKSAKGLEAPSGLIEMKGIGFASRIA---EQSLSQYLSGDKAAYDPTSKNISNVNSQS 171

Query: 433 ---------TSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-----APLI-----DENICQ 473
                    T+  + F    G  G     +++ +   + V      PL+     ++ +  
Sbjct: 172 AQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVD 231

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAY 531
           ++ G   S A+T SG V+T G    GQLG+      GL P +V        +  V+CG  
Sbjct: 232 MSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGL-PQQVKF-FTNVHIVSVSCGRQ 289

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV------DFLKDKQVKRVVCGLNFT 585
           H+  ++    ++TWG G  GQLGHG   +   P  V      D L  K V++V CG NFT
Sbjct: 290 HIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQK-VRQVACGANFT 348

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFG 610
             +       +VD  + S  H  +G
Sbjct: 349 MAL-------TVDGRLWSFGHGEYG 366


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 129/267 (48%), Gaps = 30/267 (11%)

Query: 235 PKAVESTMA-LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           P  V+  +A  +V +I+ G   +  VTK G+IF+WG    G+LG       S PQL++ L
Sbjct: 195 PIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTL 254

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSG-NLDGIH 352
             V +  V+CG  H  AVT  GDLYTWG G +  G LGH +  S   P+KV+  +L+GI 
Sbjct: 255 LDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVF--GQLGHSNVKSYLHPKKVAAFSLNGIQ 312

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALG------HGD------HISTSIPREVETL 400
           +S +SCG   T V+     L+ FG G +  LG      H D      H   S P+ VE L
Sbjct: 313 VSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEAL 372

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
              +   V+CG  HT A+              T   +++ WG G  G LG   K  +L P
Sbjct: 373 EDKKIKYVTCGHLHTLAL--------------TEDNEVYVWGWGSSGCLGLNSKRFQLVP 418

Query: 461 ECVAPLIDENICQVACGHDLSVALTTS 487
           + V  +  E I  ++ G   S+ +  S
Sbjct: 419 QLVTSISGEEISCISAGEKHSLIVRGS 445



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 184/432 (42%), Gaps = 51/432 (11%)

Query: 184 VVSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           V+ S S G AH       GDV+ WG G   G LG  E  +   FS +     P  +++ +
Sbjct: 35  VIVSCSSGEAHNICVSRFGDVYSWGRG-KEGQLGVPEKML---FSTK-----PNLIKTLL 85

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGE-------ESGGRLGHG--READVSHPQLIEIL 293
              V  +ACG  H++ +T QG ++ WG+       ++G    +G      +S P+   I+
Sbjct: 86  HERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSII 145

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW---IPRKVSGNLDG 350
              +V     GE      T   +       T       H  K+  +    P +V G L  
Sbjct: 146 EN-SVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLAN 204

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSC 410
             +  IS G   +A VT +G +FT+G    G LG       S P+ V+TL  ++   VSC
Sbjct: 205 EEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSC 264

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP--LID 468
           G  H  AV              T  G L+TWG G  G+LGH + +  L P+ VA   L  
Sbjct: 265 GRQHIGAV--------------TEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNG 310

Query: 469 ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT------------RVDG 516
             + QV+CG + ++ L  +  +Y  G   Y QLG       +              +V  
Sbjct: 311 IQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVE 370

Query: 517 EIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            + +  ++ V CG  H  ALT  ++VY WG G++G LG   K  +  P LV  +  +++ 
Sbjct: 371 ALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEIS 430

Query: 577 RVVCGLNFTAII 588
            +  G   + I+
Sbjct: 431 CISAGEKHSLIV 442



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 165/387 (42%), Gaps = 60/387 (15%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS-HPQL 289
           + L PK +ES     + + + G  H + V++ G+++SWG    G+LG   +   S  P L
Sbjct: 21  EHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNL 80

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGD----------GTYNSGLLGH----GSK 335
           I+ L    V  VACG +H+ A+T  G +Y WG               +GLL        K
Sbjct: 81  IKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPK 140

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-- 393
               I   VS  L+G    Y S          ++G+     + S      G HI   I  
Sbjct: 141 YQSIIENSVSQYLNGEKEIYDS----------TSGNNDDDDEASTSEQSKGKHIGKIIDY 190

Query: 394 ----PREVE-TLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
               P +V+  L       +S G   +AAV              T  GK+FTWG  +KG+
Sbjct: 191 NQTTPIQVQGLLANEEVIDISAGWAFSAAV--------------TKSGKIFTWGFNEKGQ 236

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVAD 507
           LG   +     P+ V  L+D  I  V+CG     A+T  G +YT G   +GQLG   V  
Sbjct: 237 LGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKS 296

Query: 508 GLVPTRVDGEIAESF-VEEVACGAYHVAALTSTSKVYTWGKGANGQLG---------HGD 557
            L P +V         V +V+CG+     L     +Y +G G   QLG          G 
Sbjct: 297 YLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGS 356

Query: 558 KDNR---NSPTLVDFLKDKQVKRVVCG 581
           +DN    +SP +V+ L+DK++K V CG
Sbjct: 357 RDNHFKYSSPKVVEALEDKKIKYVTCG 383



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 24/347 (6%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           + S G    G+LG     +   P+++E L G  +   + GE H   V+R GD+Y+WG G 
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG- 61

Query: 325 YNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALG 384
              G LG   K+       +   L    +  ++CG +H+  +T  G ++      +G L 
Sbjct: 62  -KEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVY-----EWGQLH 115

Query: 385 HGDHISTSIPRE--VETLRGLRTTRVSCGVWHTAAVVVATDSS-SSSPSGSTSCGKLFTW 441
             D   T +     +  + G+   +    + ++ +  +  +     S SG+       + 
Sbjct: 116 KIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEAST 175

Query: 442 GDGDKGR-LGHGDKEPRLFPECVAPLI-DENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            +  KG+ +G      +  P  V  L+ +E +  ++ G   S A+T SG ++T G    G
Sbjct: 176 SEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKG 235

Query: 500 QLGVP-----VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           QLG+       +  LV T +D +I       V+CG  H+ A+T    +YTWG G  GQLG
Sbjct: 236 QLGLKHRWFNSSPQLVKTLLDVKIV-----SVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290

Query: 555 HGDKDNRNSPTLVDF--LKDKQVKRVVCGLNFTAIICLHKWVSSVDH 599
           H +  +   P  V    L   QV +V CG NFT ++  ++ + +  H
Sbjct: 291 HSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGH 337



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK VE+     +  + CG  H + +T+  E++ WG  S G LG   +     PQL+  +S
Sbjct: 366 PKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSIS 425

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWG 321
           G  +  ++ GE H+  V R  DL ++ 
Sbjct: 426 GEEISCISAGEKHSLIV-RGSDLTSFA 451


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 54/409 (13%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFS-RQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           V +WG G         + R+G S S  Q + +L +A+ES    +  +++CG  H +++T 
Sbjct: 30  VALWGNG--------DQGRLGLSESGSQFEPVLCRALESH---EPCSVSCGGAHTLILTD 78

Query: 262 QGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           +G +F+ G  S G+LG   + + S  P  +       V  +A G YH+ A+T SG+ Y W
Sbjct: 79  KGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVW 137

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           G  +     LG  +K     P+K+  +L G+ L  ++ G  H+  +   G + ++G   F
Sbjct: 138 GRNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRF 196

Query: 381 GALGHGDH---------ISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           G LGHG+           +   PR +  L  L+   VS G+ H+A    A DS       
Sbjct: 197 GCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSA---CADDS------- 246

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
               G ++++G G   +LG G+      P C  P +   +  ++CG   + A+T  G +Y
Sbjct: 247 ----GTIYSFGQGSMCQLGLGNNNDASQP-CPIPDL-PRVSSISCGGYHTGAITQDGDIY 300

Query: 492 TMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN- 550
           T GS  +G LG        P R++  +AE+F+ E++CG  H AA+ S   +++WG G + 
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSY 358

Query: 551 -----------GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
                      GQLG G   +   P  ++         V CG N TA I
Sbjct: 359 GTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V  WG     G LG GE    + F + T+   P+ +     L + +++ G  H+    
Sbjct: 186 GQVLSWGTN-RFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACAD 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+S+G+ S  +LG G   D S P  I  L    V  ++CG YHT A+T+ GD+YTW
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTW 302

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG-- 378
           G   +  G LG G + S   P ++  +L    +S ISCG  HTA + S G++F++G G  
Sbjct: 303 GSNEH--GCLGSGFRASS-KPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 379 ----------SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                     S G LG G       P  +E    L    VSCG  HTAA++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 34/299 (11%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G+ ++WG           E ++G     ++  + P+ +ES   + +  +A G  H++ 
Sbjct: 130 SSGETYVWGRN--------SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLG 181

Query: 259 VTKQGEIFSWGEESGGRLGHG---------READVSHPQLIEILSGVNVELVACGEYHTC 309
           + + G++ SWG    G LGHG         ++ +   P++I  L  + +  V+ G  H+ 
Sbjct: 182 LAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSA 241

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVS--CWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
               SG +Y++G G+     LG+ +  S  C IP       D   +S ISCG +HT  +T
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP-------DLPRVSSISCGGYHTGAIT 294

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G ++T+G    G LG G   S S P  +E+L     + +SCG  HTAA+   +D    
Sbjct: 295 QDGDIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI---SDGYIF 350

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENI--CQVACGHDLSVAL 484
           S     S G   T  +   G+LG G      F E V   +D+ +    V+CG + + A+
Sbjct: 351 SWGWGGSYGTYATQAESSGGQLGVGTDFD--FFEPVPIEMDDRLSALHVSCGFNHTAAI 407


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 144/308 (46%), Gaps = 24/308 (7%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHG-READVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           HA  V + GE+F+ G+ S    GH      +  P+L+E L GV  + VA G   T  +TR
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTR 233

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLWHTAVVTSAGHL 372
            G LYT G  T+  G LGHG       P K+   L+G+  +  I+ G  +   VT  G +
Sbjct: 234 QGQLYTCGTNTH--GQLGHGDTQDRPTP-KIIELLEGVGSVVQIAAGPSYVLAVTDNGVV 290

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           ++FG GS   LGHG+      PR ++T R   +    VS G  H     VA DSS     
Sbjct: 291 YSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHA----VALDSS----- 341

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
                G +++WG G  G LGHGD+  +  P  V  L      QV      +  L   G V
Sbjct: 342 -----GFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSV 396

Query: 491 YTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           Y  G   +G LG P   ++D ++  RV   +    V +++ G YH   +T+  +++ +G 
Sbjct: 397 YGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGD 456

Query: 548 GANGQLGH 555
               QLGH
Sbjct: 457 NERAQLGH 464



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 16/283 (5%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ VE+   +    +A G    V +T+QG++++ G  + G+LGHG   D   P++IE+L 
Sbjct: 207 PRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLE 266

Query: 295 GV-NVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIH 352
           GV +V  +A G  +  AVT +G +Y++G G+  +  LGHG +   + PR + +     IH
Sbjct: 267 GVGSVVQIAAGPSYVLAVTDNGVVYSFGSGS--NLCLGHGEQHDEFRPRAIQTFRRKDIH 324

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGV 412
           + ++S G  H   + S+G ++++G G  GALGHGD I  ++P  V  L+     +V C  
Sbjct: 325 VVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQV-CAR 383

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
                V+V  D  S    G    G L   G  D+G     DK  R  P  +  L   ++ 
Sbjct: 384 KRKTFVLV--DGGSVYGFGWMGFGSL---GFPDRGL---SDKVMR--PRVLDSLRARHVS 433

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRV 514
           Q++ G   +V +T  G ++  G     QLG     G L PT +
Sbjct: 434 QISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 132/282 (46%), Gaps = 21/282 (7%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           V  G YHT  + R   +Y+ G      G+LGHG++ +  +           ++  +S   
Sbjct: 116 VTTGRYHTLLI-RDSSVYSCGSSL--CGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASH 172

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            H A V  +G +FT GD S    GH D +     PR VE L+G+   +V+ G+  T  + 
Sbjct: 173 NHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFL- 231

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID-ENICQVACGH 478
                        T  G+L+T G    G+LGHGD + R  P+ +  L    ++ Q+A G 
Sbjct: 232 -------------TRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGP 278

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDG-EIAESFVEEVACGAYHVAAL 536
              +A+T +G VY+ GS +   LG     D   P  +      +  V  V+ G  H  AL
Sbjct: 279 SYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRV 578
            S+  VY+WGKG  G LGHGD+ ++  P LV+ LK     +V
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQV 380



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 170 RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           R  A +TFR     VV  S+        DS G V+ WG+G   G LG G+         +
Sbjct: 311 RPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC-GALGHGD---------E 360

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG---HGREADVSH 286
            D  LP  V    +     +    R   ++   G ++ +G    G LG    G    V  
Sbjct: 361 IDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMR 420

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
           P++++ L   +V  ++ G YHT  VT  G ++ +GD       LGH +   C  P ++
Sbjct: 421 PRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDN--ERAQLGHDTLRGCLQPTEI 476


>gi|299116914|emb|CBN75024.1| Regulator of chromosome condensation, RCC1; Ankyrin ubiquitin
           interaction motif, zinc finger protein [Ectocarpus
           siliculosus]
          Length = 1310

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 174/413 (42%), Gaps = 46/413 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDVF +G+          +  +GY    + D + P+ VES   L V  +A    H+  VT
Sbjct: 167 GDVFSFGKA---------DFTLGYDSFGRADIIPPRRVESLANLHVTRVAASKHHSAAVT 217

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G++F+WG    GRLGHG E     P  ++ L+   V  V+  E HT A+TR G+LYTW
Sbjct: 218 VCGKLFTWGHGKSGRLGHGNEEVCMLPTPVDGLAHQAVTDVSVAETHTAALTREGELYTW 277

Query: 321 GDGTYNSGLLGHGSKVSC--WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
           G   +  G LGHGS  S   + P++V G L  + +  ++ G  HTAV TS+GH +TFG  
Sbjct: 278 GRDRF--GQLGHGSAGSSGRFAPKRVEG-LRKVTVVAVAAGTEHTAVATSSGHCYTFGRN 334

Query: 379 SFGALGHGDHISTSIPREVETLR----------GLRTTRVSCGVWHTAAVVVATDSSSSS 428
           + G LG      T  PR V  L           G    +VS     T  V    D     
Sbjct: 335 NHGQLGLAGVKETCAPRVVSYLASGASRGAGGVGRHVIKVSASARSTVVVTRGIDRG--- 391

Query: 429 PSGSTSCGKLFTWGDGD--KGRLGHG---DKEPRLFPECVAPLIDENICQVACGHDLSVA 483
            SG  +  ++  WG G     R+      D  P    +     +D  I  VA     +VA
Sbjct: 392 -SGLQTVNEVHQWGHGSPVPSRVSFNSAKDASPSSRWQTHDARVD--IVDVAAARCHNVA 448

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE--------VACGAYHVAA 535
           L   G V+T G  A   LG+   +    T    ++  + + E        V+    H   
Sbjct: 449 LDRVGMVFTWGFGA-DHLGLDPRE--TRTARGPQLVAAMLPENCGGNPISVSASDQHSCV 505

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +T T  ++TWG         G   NR  P        K+V RV    + T ++
Sbjct: 506 VTDTGDLFTWGTSGGEGGALGHGSNRWQPLAKRVPSLKKVARVAAAPDHTVVL 558


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 155/354 (43%), Gaps = 29/354 (8%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P  V+      +  +A G  H++ VT  G + +WG  S G+LG G     S P  +++ +
Sbjct: 84  PVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPA 143

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHL 353
           G  V  VA G+ H+ AVT +G +  WG    N +G L  G+  +      V     G  +
Sbjct: 144 GTTVTAVAAGDRHSLAVTSTGTVLAWG---LNVTGQLYDGTTTTNSSTPIVVDLPAGTTV 200

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRG-LRTTRVSCGV 412
           + ++ G  H+  +TSAG +  +G  S G LG G     S P  V+   G   +T  +   
Sbjct: 201 TAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSS 260

Query: 413 WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC 472
            H+ AV              TS G +  WG    G+LG G    R  P  V       + 
Sbjct: 261 SHSLAV--------------TSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVT 306

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFVEEVA 527
            VA G   S+A+T++G +   G    GQLG    DG       P  VD   A + V  VA
Sbjct: 307 AVATGSGHSLAVTSTGTMLAWGGNGSGQLG----DGSTTSSSTPVAVD-LPAGTTVTAVA 361

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            GA H  ALTST  +  WG   +GQLG G   NR++P   D   D  +  +  G
Sbjct: 362 GGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGG 415



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 121/288 (42%), Gaps = 31/288 (10%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G V  WG  +             Y  +  T++  P  V+      V  +A G  H++ 
Sbjct: 162 STGTVLAWGLNVTGQL---------YDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLA 212

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEY-HTCAVTRSGDL 317
           +T  G + +WG  S G+LG G     S P  +++ +G  +  +A     H+ AVT +G +
Sbjct: 213 LTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTM 272

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYISCGLWHTAVVTSAGHLFTFG 376
             WG     +G LG G+  +   P  V  +L  G  ++ ++ G  H+  VTS G +  +G
Sbjct: 273 LAWG--ANFTGQLGDGTITNRSTPVAV--DLPAGTTVTAVATGSGHSLAVTSTGTMLAWG 328

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
               G LG G   S+S P  V+   G   T V+ G  H+ A+              TS G
Sbjct: 329 GNGSGQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLAL--------------TSTG 374

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG--HDLSV 482
            +  WG    G+LG G    R  P       D  I  +A G  H L+V
Sbjct: 375 TMLAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAV 422



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 85/202 (42%), Gaps = 17/202 (8%)

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           G    +GD +   LG G   + S P  V+       T V+ G  H+ AV           
Sbjct: 60  GTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAV----------- 108

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
              TS G +  WG    G+LG G   PR  P  V       +  VA G   S+A+T++G 
Sbjct: 109 ---TSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGT 165

Query: 490 VYTMGSAAYGQL--GVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           V   G    GQL  G    +   P  VD   A + V  VA G  H  ALTS   V  WG 
Sbjct: 166 VLAWGLNVTGQLYDGTTTTNSSTPIVVD-LPAGTTVTAVAAGNAHSLALTSAGTVLAWGA 224

Query: 548 GANGQLGHGDKDNRNSPTLVDF 569
            ++GQLG G    R++P  VD 
Sbjct: 225 NSSGQLGDGTTTPRSTPVAVDL 246



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 17/240 (7%)

Query: 183 SVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE-S 240
           + V++ + G+AH     S G V  WG   ++G LG G      +  R T    P AV+  
Sbjct: 198 TTVTAVAAGNAHSLALTSAGTVLAWGAN-SSGQLGDGT-----TTPRST----PVAVDLP 247

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                    A  + H++ VT  G + +WG    G+LG G   + S P  +++ +G  V  
Sbjct: 248 AGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTA 307

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYISCG 359
           VA G  H+ AVT +G +  WG     SG LG GS  S   P  V  +L  G  ++ ++ G
Sbjct: 308 VATGSGHSLAVTSTGTMLAWGG--NGSGQLGDGSTTSSSTPVAV--DLPAGTTVTAVAGG 363

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
             H+  +TS G +  +G  + G LG G   + S P   +       T ++ G +H+ AVV
Sbjct: 364 AGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAVV 423



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 11/138 (7%)

Query: 183 SVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           + V++ + GS H     S G +  WG G  +G LG G           T +  P AV+  
Sbjct: 303 TTVTAVATGSGHSLAVTSTGTMLAWG-GNGSGQLGDGS---------TTSSSTPVAVDLP 352

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
               V  +A GA H++ +T  G + +WG  + G+LG G  ++ S P   ++ +   +  +
Sbjct: 353 AGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAI 412

Query: 302 ACGEYHTCAVTRSGDLYT 319
           A G +H+ AV  S    T
Sbjct: 413 AGGSFHSLAVVPSASTTT 430


>gi|259490066|ref|NP_001159144.1| uncharacterized protein LOC100304223 [Zea mays]
 gi|223942239|gb|ACN25203.1| unknown [Zea mays]
          Length = 450

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 35/275 (12%)

Query: 597 VDHSVCSSCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAALAPSINKPYRVCDDCFTK 656
           ++ S CS+C  PFGF RKRHNCYNCGLV C +CSS+K+L+AAL+P+  KPYRVCD C+ K
Sbjct: 1   MEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVK 60

Query: 657 LKKTDTKLKRTSGYTSVVQSPRNRTGNVNHKT-AELADREAQGPRLQDQLSILSSFDSNK 715
           L K            S V   RN    +   T AE  D +A       +++  +S D  +
Sbjct: 61  LSKV---------LDSGVSYSRNTIPRLPGDTKAERIDTKA------TRVAQSNSSDMIR 105

Query: 716 QTESRLSKQNLKLELQDNHVYPVNKNLQMGRIYSPKSSIFLAKSSKKKFSASASS----- 770
             + + +KQ  K E        V   LQ+  I       F++    +  S  A+      
Sbjct: 106 NLDVKAAKQTKKSEYSSQ----VPATLQLKDI------PFISAPDLQNLSTVANQYPYDP 155

Query: 771 -SRMSSLATSPVSGKSSSARSSAVTIDDSKQMNDSLNQEIIKLRAQVEELTSKSEHLEAE 829
            S + SL    ++  SS +  S+ ++ D+   N+ L QE+ KL+A+V  L  + E  +AE
Sbjct: 156 RSTLPSLRMPYLNYSSSMSSESSESLKDA---NELLKQEVQKLQAEVNSLRQEREQQDAE 212

Query: 830 LERTSKQLKTVTAIAEDEAEKCKTANEVIKSLTVQ 864
           L++   + +    +A +EA K KTA +VI SLT Q
Sbjct: 213 LQKADAKAREAMNLATEEASKLKTAKDVINSLTAQ 247


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 28/314 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I  G   AV++T  G ++SWG  S G+LGH  + D+S P +I       +  +ACG+ H+
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHS 272

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G +Y WG+G+   G LG G+     IP K+  + +   ++ I+CG   +  ++ 
Sbjct: 273 LALDEIGVVYAWGNGS--GGRLGLGNSEVVSIP-KIIPHFEDEKITSIACGQEFSLALSD 329

Query: 369 AGHLFTFGDGSFGALGH--GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           +G +F++G G  G LG+     +S S P+ +  L     +++SCG WH+  +        
Sbjct: 330 SGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLP--PASQISCGNWHSMVL-------- 379

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                 +  G ++T+G     RLGH        P  V   I   I ++  G + +  L+ 
Sbjct: 380 ------SKSGDVYTFGSNIDCRLGHSGNGST--PTMVQ--IGSKIKKIGAGANFNAVLSE 429

Query: 487 SGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           S  +YT GS  + QLGV + D    T   +V   +    +  +  G  HV  LT T +V+
Sbjct: 430 SNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVF 489

Query: 544 TWGKGANGQLGHGD 557
           T+G  +  Q G G+
Sbjct: 490 TFGDNSMMQCGVGE 503



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)

Query: 229 QTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           + D  +P  + +     +  IACG  H++ + + G +++WG  SGGRLG G    VS P+
Sbjct: 245 KNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPK 304

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
           +I       +  +ACG+  + A++ SG +++WG G +  G LG+   VS  + +     +
Sbjct: 305 IIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLH--GNLGY--DVSTMLSQSTPKVI 360

Query: 349 DGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
             +   S ISCG WH+ V++ +G ++TFG      LGH  + ST  P  V+   G +  +
Sbjct: 361 PMLPPASQISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGST--PTMVQI--GSKIKK 416

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF---PECVA 464
           +  G    A +              +    ++TWG     +LG    + R +   P+ V 
Sbjct: 417 IGAGANFNAVL--------------SESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVK 462

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
            L+   I  +  G++  V LT +G V+T G  +  Q GV
Sbjct: 463 TLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGV 501



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 36/297 (12%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           +  G+     +T +G +Y+WG  +Y  G LGH +K    IP  +S       ++ I+CG 
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSY--GKLGHPTKNDISIPSMISA-FKNKQITQIACGK 269

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  +   G ++ +G+GS G LG G+    SIP+ +      + T ++CG   + A+  
Sbjct: 270 DHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLAL-- 327

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH------GDKEPRLFPECVAPLIDENICQV 474
            +DS           GK+F+WG G  G LG+          P++ P  + P       Q+
Sbjct: 328 -SDS-----------GKVFSWGKGLHGNLGYDVSTMLSQSTPKVIP-MLPP-----ASQI 369

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           +CG+  S+ L+ SG VYT GS    +LG    +G  PT V      S ++++  GA   A
Sbjct: 370 SCGNWHSMVLSKSGDVYTFGSNIDCRLG-HSGNGSTPTMVQ---IGSKIKKIGAGANFNA 425

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRN---SPTLVDFLKDKQVKRVVCGLNFTAII 588
            L+ ++ +YTWG   + QLG    D+RN    P +V  L    +  +  G     ++
Sbjct: 426 VLSESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVL 482



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 16/190 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G VF WG+G+ +G LG   + V    S+ T  ++P      M      I+CG  H+++++
Sbjct: 331 GKVFSWGKGL-HGNLG---YDVSTMLSQSTPKVIP------MLPPASQISCGNWHSMVLS 380

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
           K G+++++G     RLGH    + S P +++I  G  ++ +  G      ++ S  +YTW
Sbjct: 381 KSGDVYTFGSNIDCRLGHS--GNGSTPTMVQI--GSKIKKIGAGANFNAVLSESNAIYTW 436

Query: 321 GDGTY-NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           G   +   G+L    +     P+ V   L    +S I  G  H  V+T  G +FTFGD S
Sbjct: 437 GSNIHCQLGVLLPDHRNYTGEPQVVK-TLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNS 495

Query: 380 FGALGHGDHI 389
               G G+ I
Sbjct: 496 MMQCGVGEAI 505



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 498 YGQLGVP----VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
           +GQ+  P    +A G  PT V     E     +  G      LT T  VY+WG  + G+L
Sbjct: 182 WGQMLCPSLSLIATG-TPTGVLFNQKEHSPTTIKFGQNFAVMLTDTGGVYSWGLCSYGKL 240

Query: 554 GHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           GH  K++ + P+++   K+KQ+ ++ CG
Sbjct: 241 GHPTKNDISIPSMISAFKNKQITQIACG 268



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDV+ +G  I        + R+G+S +  T    P  V+  +   +  I  GA    +++
Sbjct: 383 GDVYTFGSNI--------DCRLGHSGNGST----PTMVQ--IGSKIKKIGAGANFNAVLS 428

Query: 261 KQGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDL 317
           +   I++WG     +LG            PQ+++ L    +  +  G  H   +T +G++
Sbjct: 429 ESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEV 488

Query: 318 YTWGDGTYNSGLLGHGSKVSCWIPR 342
           +T+GD +     +G   K  C   R
Sbjct: 489 FTFGDNSMMQCGVGEAIKEVCNFTR 513


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 139/278 (50%), Gaps = 24/278 (8%)

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           SG L  + +  Y  GLLG G  +    P+KV  NL+G+  + +S G  H A +   G +F
Sbjct: 46  SGRLRRFLERMYCWGLLGLGETLDVLYPQKV--NLEGV--TCVSAGHRHAAAIVGGGDVF 101

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
            +G G  G LG G + S   P+ +     ++   +SCG  H+  +              T
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSFPMPVKA--LSCGGSHSLFI--------------T 145

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
             G+L+  G G +G+LG G +E  L P E   P     +    CG D SV  T SG V+T
Sbjct: 146 EDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFT 205

Query: 493 MGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGAN 550
            GS  YGQLG+       + P  V   +A   V  +A G YH AA+TS  K+YTWG G +
Sbjct: 206 FGSDDYGQLGLGQFARYAMTPKEV-AVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRS 264

Query: 551 GQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           GQLG+G+  + + P LV  L++ +V+ V CG + T  +
Sbjct: 265 GQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 142/331 (42%), Gaps = 59/331 (17%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D L P+ V       V  ++ G RHA  +   G++F WG    G+LG G       PQ +
Sbjct: 69  DVLYPQKVNLE---GVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPL 125

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
                + V+ ++CG  H+  +T  G LY  G G    G LG GS+ S   P +V      
Sbjct: 126 SFP--MPVKALSCGGSHSLFITEDGRLYATGRG--KEGQLGTGSQESVLSPVEVQMPEGS 181

Query: 351 IHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVS 409
             +    CG   + + T +G +FTFG   +G LG G     ++ P+EV  L G     ++
Sbjct: 182 GRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIA 241

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G +H AAV              TS GKL+TWG G  G+LG+G+      P  V  L + 
Sbjct: 242 AGDYHAAAV--------------TSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNL 287

Query: 470 NICQVACGHDLSVALT----------------TSGHVYTMGSAAYGQLGVPVADGLVPTR 513
            +  VACG D +VA+                  SG V+ MG    GQLG           
Sbjct: 288 RVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLG----------- 336

Query: 514 VDGEIAES---------FVEEVACGAYHVAA 535
             G+I ES          V++VACG  H  A
Sbjct: 337 -RGDIVESPAVYRSVPLQVQQVACGTSHTLA 366



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 151/293 (51%), Gaps = 26/293 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           GDVF+WG G  +G LG G ++  ++         P+ +  +  + V  ++CG  H++ +T
Sbjct: 98  GDVFVWGRGF-SGQLGLGTNKSHFT---------PQPL--SFPMPVKALSCGGSHSLFIT 145

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN-VELVACGEYHTCAVTRSGDLYT 319
           + G +++ G    G+LG G +  V  P  +++  G   V+   CG+  +   T SG ++T
Sbjct: 146 EDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFT 205

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           +G   Y    LG  ++ +   P++V+  L G ++  I+ G +H A VTS G L+T+G G 
Sbjct: 206 FGSDDYGQLGLGQFARYA-MTPKEVA-VLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGR 263

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV--VATDSSSSSPSGSTSCGK 437
            G LG+G+ +  S+P  V  L+ LR   V+CG  HT AV+     +      S     G+
Sbjct: 264 SGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGE 323

Query: 438 LFTWGDGDKGRLGHGD--KEPRLFPECVAPLIDENICQVACG--HDLSVALTT 486
           +F  G G +G+LG GD  + P ++     PL    + QVACG  H L+  + T
Sbjct: 324 VFVMGRGREGQLGRGDIVESPAVYRS--VPL---QVQQVACGTSHTLARGVRT 371



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 156/343 (45%), Gaps = 56/343 (16%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC---GEYHTCAVTRSGDLYTWG 321
           ++ WG      LG G   DV +PQ       VN+E V C   G  H  A+   GD++ WG
Sbjct: 56  MYCWG-----LLGLGETLDVLYPQK------VNLEGVTCVSAGHRHAAAIVGGGDVFVWG 104

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
            G   SG LG G+  S + P+ +S  +    +  +SCG  H+  +T  G L+  G G  G
Sbjct: 105 RGF--SGQLGLGTNKSHFTPQPLSFPMP---VKALSCGGSHSLFITEDGRLYATGRGKEG 159

Query: 382 ALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG G   S   P EV+   G  R     CG   +   V+AT+S           G++FT
Sbjct: 160 QLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFS---VIATES-----------GQVFT 205

Query: 441 WGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
           +G  D G+LG G      + P+ VA L  +N+  +A G   + A+T+ G +YT G    G
Sbjct: 206 FGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSG 265

Query: 500 QLGVP-VADGLVPTRVDGEIAESFVEEVACGAYHVAALT----------------STSKV 542
           QLG     D  +P  V  E+    V+ VACG  H  A+                  + +V
Sbjct: 266 QLGNGNTVDVSLPVLVR-ELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEV 324

Query: 543 YTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           +  G+G  GQLG GD     SP +   +   QV++V CG + T
Sbjct: 325 FVMGRGREGQLGRGDI--VESPAVYRSVP-LQVQQVACGTSHT 364


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 77/375 (20%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--V 284
           S  T +L P  V S     V  ++ G  H+  VT  G++F+WG  S G+LG G+ A   V
Sbjct: 109 SSVTHSLEPIEV-SGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVV 167

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC------ 338
           S P+ ++ L+   V++VA G  H+ A T  G++ +W  G   +G LGHG K S       
Sbjct: 168 STPRKVDCLADARVKMVALGSEHSIATTEEGEVLSW--GAAGAGRLGHGHKTSILGFSIT 225

Query: 339 ---WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH-GDHISTSIP 394
              + PR +  NLDG+ +  I+ G+ H+A +   G LF FG  +    G  GD +  ++ 
Sbjct: 226 TSEYTPRLIK-NLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVV 284

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
            EV       +  V+CG +HT    V TDS           G L++WG  + G LG G  
Sbjct: 285 EEVPF-----SEEVACGGYHT---CVVTDS-----------GDLYSWGSNENGCLGLGGT 325

Query: 455 EPRLFPECV-APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
           +    PE + + L    + +V+CG     A+ + G +YT G           A+G     
Sbjct: 326 DMVRSPEVLKSSLFKFPVSKVSCGWK-HTAVISGGDIYTWGWGG--------ANG----- 371

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
                  +F EE                    G  + GQLGHG+  +   P +V+F K+ 
Sbjct: 372 -------TFFEE--------------------GHSSGGQLGHGNDVDYFEPMMVEFGKNA 404

Query: 574 QVKRVVCGLNFTAII 588
           +   V CG N T  I
Sbjct: 405 RAVHVSCGFNHTGAI 419



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 43/342 (12%)

Query: 268 WGEESGGRLGHG----READVSHPQLIEILSGVNVEL----VACGEYHTCAVTRSGDLYT 319
           WG    GRLG G    R +  + P  +    G + +     +ACG  HT  +T SG ++ 
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 320 WGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
              G  + G LG GS V+  + P +VSG  +   +  +S G  H+  VT+ G LF +G  
Sbjct: 97  --AGLNDFGQLGIGSSVTHSLEPIEVSGFDE--KVVEVSAGNHHSCAVTADGKLFAWGRN 152

Query: 379 SFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           S G LG G       S PR+V+ L   R   V+ G  H+ A              +T  G
Sbjct: 153 SSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIA--------------TTEEG 198

Query: 437 KLFTWGDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGHDLSVALTTS 487
           ++ +WG    GRLGHG K   L          P  +  L    I ++A G   S  +   
Sbjct: 199 EVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEK 258

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G ++  G       G    D L PT V+ E+   F EEVACG YH   +T +  +Y+WG 
Sbjct: 259 GTLFIFGQKTEKGFGRS-GDELRPTVVE-EVP--FSEEVACGGYHTCVVTDSGDLYSWGS 314

Query: 548 GANGQLGHGDKDNRNSP-TLVDFLKDKQVKRVVCGLNFTAII 588
             NG LG G  D   SP  L   L    V +V CG   TA+I
Sbjct: 315 NENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           VS+ +H S     D  G +F WG   ++G LG G+ R G   S       P+ V+     
Sbjct: 130 VSAGNHHSCAVTAD--GKLFAWGRN-SSGQLGLGK-RAGKVVS------TPRKVDCLADA 179

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSG 295
            V  +A G+ H++  T++GE+ SWG    GRLGHG +  +           P+LI+ L G
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDG 239

Query: 296 VNV------------------------------------------------ELVACGEYH 307
           V +                                                E VACG YH
Sbjct: 240 VKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYH 299

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           TC VT SGDLY+W  G+  +G LG G       P  +  +L    +S +SCG  HTAV+ 
Sbjct: 300 TCVVTDSGDLYSW--GSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI- 356

Query: 368 SAGHLFTFG----DGSF--------GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           S G ++T+G    +G+F        G LGHG+ +    P  VE  +  R   VSCG  HT
Sbjct: 357 SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHT 416

Query: 416 AAV 418
            A+
Sbjct: 417 GAI 419


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 33/342 (9%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           ++CG  H  +VT   +++ +G  + G+LG G +A +  P  I+ L    V+L ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              T +G +Y  G    N G LG G         ++        +  +S G   +A +T 
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195

Query: 369 AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
            G LF +GD S G +G  D  +  IP EV    G   + +SCG +H+A V          
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFV---------- 243

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL----IDENICQVACGHDLSVAL 484
               T  G+L+T+G+ + G+LG  ++   L     +P     I E + QVACG   +V L
Sbjct: 244 ----TMDGELYTFGEPENGKLGLPNE---LLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296

Query: 485 TTSGHVYTMGSAAYGQLGVPVADGLVPT---RVDGEIAESFVEEVACGAYHVAALTSTSK 541
           T    VY  G   +GQLG  +   L  T   ++   I +  +  ++CG  H A +T    
Sbjct: 297 TEK-VVYAFGLGQFGQLG--LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGL 353

Query: 542 VYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +YT+G G +G+LG G ++  N+  PTL        V+ + CG
Sbjct: 354 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 37/315 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEI 292
           P  +++     V   ACG  H ++ T  G +++ G  + G+LG G   + D  H Q++  
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
                ++ ++ G   + A+T  G L+ WGD +   G +G   K +  IP +V+    G  
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVT---VGKP 229

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL--RTTRVSC 410
           +S+ISCG +H+A VT  G L+TFG+   G LG  + +  +  R  + + G+  R  +V+C
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288

Query: 411 GVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF----PECVAPL 466
           G  HT   VV T+              ++ +G G  G+LG G     LF    P+ +  +
Sbjct: 289 GGGHT---VVLTEKV------------VYAFGLGQFGQLGLGT---FLFETSEPKIIERI 330

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV---ADGLVPTRVDGEIAESFV 523
            D+ IC ++CG + +  +T  G +YT G   +G+LG+ +    +   PT     +  + V
Sbjct: 331 KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA-V 389

Query: 524 EEVACGAYHVAALTS 538
           + +ACG  H+    +
Sbjct: 390 QLIACGGCHMLVFAT 404



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G +F+WG+          E ++G     +++  +P  V  T+   +  I+CG  H+  VT
Sbjct: 197 GKLFMWGDN--------SEGQIG--LEDKSNVCIPHEV--TVGKPISWISCGYYHSAFVT 244

Query: 261 KQGEIFSWGEESGGRLGHGREADVSH--PQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
             GE++++GE   G+LG   E  ++H  PQ +  +    ++ VACG  HT  +T    +Y
Sbjct: 245 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLTEK-VVY 302

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +G G +  G LG G+ +      K+   +    + +ISCG  HTA++T  G L+TFGDG
Sbjct: 303 AFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360

Query: 379 SFGALGHG--DHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
             G LG G  +  +   P             ++CG  H   +V AT
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHM--LVFAT 404


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 109/216 (50%), Gaps = 15/216 (6%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           IS G  HT  + +   + ++G G  G LGHGD     +P  V  L G   T V CG  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVA 475
            A              S S   +++WG GD GRLGHG+      P  +  L    I Q+A
Sbjct: 79  TAY-------------SDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIA 125

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
           CG    +A+T +G V + G    GQLGV    D   P RV    AE  V +V+CG  H  
Sbjct: 126 CGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVK-LPAEEEVVQVSCGWRHTV 184

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           A+T  S V++WG+G +GQLGHGD  +RN P L++ L
Sbjct: 185 AITGKSNVFSWGRGTSGQLGHGDILDRNMPVLIEAL 220



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 19/227 (8%)

Query: 249 IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHT 308
           I+ GA H V +     + SWG    G+LGHG   D   P  +  L G  +  V CG  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 309 CAVTRSG-DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
            A + S   +Y+WG G +  G LGHG+    +IP  +   L G+ +  I+CG  H   VT
Sbjct: 79  TAYSDSRLVVYSWGWGDF--GRLGHGNSSDLFIPHAIK-TLQGLQIKQIACGDSHCLAVT 135

Query: 368 SAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
             G + ++G    G LG GD+I  S P+ V+        +VSCG  HT A+         
Sbjct: 136 INGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAI--------- 186

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL-IDENICQ 473
                T    +F+WG G  G+LGHGD   R  P  +  L +D + C+
Sbjct: 187 -----TGKSNVFSWGRGTSGQLGHGDILDRNMPVLIEALSVDGSACE 228



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 18/206 (8%)

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V L++ G  HT A+     + +WG G    G LGHG      +P  VS  LDG  ++ + 
Sbjct: 16  VLLISAGASHTVALVAGNLVCSWGRG--EDGQLGHGDAEDRPMPTFVSA-LDGCEITSVI 72

Query: 358 CGLWH-TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           CG  H TA   S   ++++G G FG LGHG+     IP  ++TL+GL+  +++CG  H  
Sbjct: 73  CGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCL 132

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
           AV +               G++ +WG    G+LG GD     FP+ V    +E + QV+C
Sbjct: 133 AVTIN--------------GEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSC 178

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLG 502
           G   +VA+T   +V++ G    GQLG
Sbjct: 179 GWRHTVAITGKSNVFSWGRGTSGQLG 204



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 15/182 (8%)

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           +S G  HT A+V          +G+  C    +WG G+ G+LGHGD E R  P  V+ L 
Sbjct: 19  ISAGASHTVALV----------AGNLVC----SWGRGEDGQLGHGDAEDRPMPTFVSALD 64

Query: 468 DENICQVACGHDLSVALTTSGHV-YTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEV 526
              I  V CG D + A + S  V Y+ G   +G+LG   +  L        +    ++++
Sbjct: 65  GCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQI 124

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTA 586
           ACG  H  A+T   +V +WG+  NGQLG GD  + + P  V    +++V +V CG   T 
Sbjct: 125 ACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTV 184

Query: 587 II 588
            I
Sbjct: 185 AI 186



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 14/153 (9%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           ++SV+  + H +A+ D   +  V+ WG G           R+G+  S  +D  +P A+++
Sbjct: 68  ITSVICGADHTTAYSDSRLV--VYSWGWGDFG--------RLGHGNS--SDLFIPHAIKT 115

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
              L +  IACG  H + VT  GE+ SWG    G+LG G   D S PQ +++ +   V  
Sbjct: 116 LQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQ 175

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG 333
           V+CG  HT A+T   ++++WG GT  SG LGHG
Sbjct: 176 VSCGWRHTVAITGKSNVFSWGRGT--SGQLGHG 206



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 512 TRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
           TR DG+  +  +  ++ GA H  AL + + V +WG+G +GQLGHGD ++R  PT V  L 
Sbjct: 7   TRNDGQRRKVLL--ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALD 64

Query: 572 DKQVKRVVCGLNFT 585
             ++  V+CG + T
Sbjct: 65  GCEITSVICGADHT 78



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 13/112 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V  WG    NG LG G++ + +SF        P+ V+     +V  ++CG RH V +T
Sbjct: 138 GEVQSWGRN-QNGQLGVGDN-IDHSF--------PQRVKLPAEEEVVQVSCGWRHTVAIT 187

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
            +  +FSWG  + G+LGHG   D + P LIE LS   V+  AC +  T   T
Sbjct: 188 GKSNVFSWGRGTSGQLGHGDILDRNMPVLIEALS---VDGSACEQIQTSKTT 236


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 169/367 (46%), Gaps = 44/367 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V  +ACG+ ++V+V   G++ S G+   G+LGHG   + + P+++E L GV V  VA   
Sbjct: 69  VDGVACGSSYSVVVVA-GQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARG 127

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT A+   G +Y+WG G  + G LGHG+  +   PR+++  L    +  +  G  H+  
Sbjct: 128 AHTLALDDRGRVYSWGRG--DEGQLGHGAFEAVPHPRRIA-RLP-TSVVAVGAGRTHSLA 183

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           + + G ++++G G  GALGHGD      PR VE  +      VSCG  H A V       
Sbjct: 184 LDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVV------- 236

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ---VACG--HDL 480
                  T+ G L TWG    G+ G       L P  V PL  +   +    ACG  H L
Sbjct: 237 -------TADGALVTWGWAAYGQCGASAGGDGLRPAEV-PLPGDGGAECVLAACGYRHTL 288

Query: 481 SVALTTSGH-VYTMGSAAYGQLGVPVADGLVPTRVDGEIAES-------FVEEVACGAYH 532
                 SG  ++  G  AYGQ G        P RV G+   S        VE ++ G  H
Sbjct: 289 CATRHASGDAIWAFGWNAYGQCGGSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRH 348

Query: 533 ----VAALTSTSKVYTWGKGANGQLGHGD-KDNRNSPTL------VDFLKDKQVKRVVCG 581
               V      +  Y WG+G +GQLG GD +D R +P +      V+ +  + ++ + CG
Sbjct: 349 SVCCVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACG 408

Query: 582 LNFTAII 588
              T  +
Sbjct: 409 WAHTVFV 415



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 34/301 (11%)

Query: 265 IFSWGEESGGRLGHG-READVSHPQLIEI--LSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           +++ G  + G+LG G RE+ V  P  +    L    V+ VACG  ++  V  +G + + G
Sbjct: 34  VYACGYNATGQLGCGDRESRVV-PWRVRTSRLGKGRVDGVACGSSYSVVVV-AGQVASCG 91

Query: 322 DGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
              +  G LGHG +     PR V G L G+ +  ++    HT  +   G ++++G G  G
Sbjct: 92  KNVH--GQLGHGGRDEETAPRVVEG-LRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEG 148

Query: 382 ALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
            LGHG   +   PR +  L    T+ V+ G   T ++ +  D            G +++W
Sbjct: 149 QLGHGAFEAVPHPRRIARLP---TSVVAVGAGRTHSLALDAD------------GAVYSW 193

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
           G GD G LGHGD+  +L P  V          V+CG   +  +T  G + T G AAYGQ 
Sbjct: 194 GCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQC 253

Query: 502 GVPV-ADGLVPTRV----DGEIAESFVEEVACGAYHVAALT---STSKVYTWGKGANGQL 553
           G     DGL P  V    DG  AE  +   ACG  H    T   S   ++ +G  A GQ 
Sbjct: 254 GASAGGDGLRPAEVPLPGDGG-AECVLA--ACGYRHTLCATRHASGDAIWAFGWNAYGQC 310

Query: 554 G 554
           G
Sbjct: 311 G 311



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 138/331 (41%), Gaps = 69/331 (20%)

Query: 325 YNS-GLLGHGSKVSCWIPRKV------SGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
           YN+ G LG G + S  +P +V       G +DG+     +CG  ++ VV  AG + + G 
Sbjct: 39  YNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGV-----ACGSSYSVVVV-AGQVASCGK 92

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
              G LGHG     + PR VE LRG+R   V+    HT    +A D            G+
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHT----LALDDR----------GR 138

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           +++WG GD+G+LGHG  E    P  +A L   ++  V  G   S+AL   G VY+ G   
Sbjct: 139 VYSWGRGDEGQLGHGAFEAVPHPRRIARL-PTSVVAVGAGRTHSLALDADGAVYSWGCGD 197

Query: 498 YGQLG--------VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
            G LG         P A     TR            V+CG+ H A +T+   + TWG  A
Sbjct: 198 DGALGHGDRRRQLAPRAVEFFKTRP--------AAAVSCGSRHNAVVTADGALVTWGWAA 249

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHN-- 607
            GQ G     +   P  V    D   + V+    +              H++C++ H   
Sbjct: 250 YGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGY-------------RHTLCATRHASG 296

Query: 608 ----PFGFRRKRHNCY-NCGLVFCKACSSRK 633
                FG+     N Y  CG   C A + R+
Sbjct: 297 DAIWAFGW-----NAYGQCGGSTCSAAAPRR 322



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 18/219 (8%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLR--GLRTTRVSCGVWHTAAVVVATDSSSSSP 429
           ++  G  + G LG GD  S  +P  V T R    R   V+CG  ++  VV          
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA--------- 84

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
                 G++ + G    G+LGHG ++    P  V  L    +  VA     ++AL   G 
Sbjct: 85  ------GQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGR 138

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           VY+ G    GQLG    + +   R    +  S V  V  G  H  AL +   VY+WG G 
Sbjct: 139 VYSWGRGDEGQLGHGAFEAVPHPRRIARLPTSVVA-VGAGRTHSLALDADGAVYSWGCGD 197

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +G LGHGD+  + +P  V+F K +    V CG    A++
Sbjct: 198 DGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVV 236



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           P+ VE    + V  +A    H + +  +G ++SWG    G+LGHG    V HP+ I  L 
Sbjct: 109 PRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLP 168

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             +V  V  G  H+ A+   G +Y+WG G  + G LGHG +     PR V         +
Sbjct: 169 -TSVVAVGAGRTHSLALDADGAVYSWGCG--DDGALGHGDRRRQLAPRAVE-FFKTRPAA 224

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGV 412
            +SCG  H AVVT+ G L T+G  ++G  G         P EV      G      +CG 
Sbjct: 225 AVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGY 284

Query: 413 WHT 415
            HT
Sbjct: 285 RHT 287



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 114/286 (39%), Gaps = 36/286 (12%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VV+ ++ G+     D  G V+ WG G   G LG G         R+  A LP +V +   
Sbjct: 120 VVAVAARGAHTLALDDRGRVYSWGRG-DEGQLGHGAFEA-VPHPRRI-ARLPTSVVA--- 173

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
                +  G  H++ +   G ++SWG    G LGHG       P+ +E         V+C
Sbjct: 174 -----VGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSC 228

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD-GIHLSYISCGLWH 362
           G  H   VT  G L TWG   Y  G  G  +      P +V    D G      +CG  H
Sbjct: 229 GSRHNAVVTADGALVTWGWAAY--GQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRH 286

Query: 363 TAVVT---SAGHLFTFGDGSFGALGHGDHISTSIPREV--------ETLRGLRTTRVSCG 411
           T   T   S   ++ FG  ++G  G G   S + PR V        E   G     +S G
Sbjct: 287 TLCATRHASGDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAG 345

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR 457
             H+   V         P G T+    + WG GD G+LG GD+  R
Sbjct: 346 GRHSVCCV-------RLPGGGTAT---YAWGRGDDGQLGSGDRRDR 381


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 183/412 (44%), Gaps = 61/412 (14%)

Query: 203 VFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           V  WG G  +G LG G    GY      +    + V +  AL V  +  G+R+++ +   
Sbjct: 13  VLAWGSG-EDGQLGMG----GYE-----EEDWARGVAALDALAVSAVVAGSRNSLAICAD 62

Query: 263 GEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWG 321
           G +F+WG    G LGH  E    S P  ++ L+GV++   A G +H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 322 DGTYNSGLLGH-------GSKV---SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
              Y  G  G        G++       IP+  +  L    +  ++ G  H+ V+T  GH
Sbjct: 123 GNEY--GQCGEEAERKEDGTRALRRDIPIPQGCAPKL---KVRQVAAGGTHSVVLTQDGH 177

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++T+G         GD    S P  V+ L  ++   ++ G +H  A+             
Sbjct: 178 VWTWGQ----PWPPGDIKQISTPVRVQGLENVKV--IAVGAFHNLAL------------- 218

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVY 491
            T  G L+ WG+ + G+LG GD +PR  P  V  L D ++  +A G   S ALT  G VY
Sbjct: 219 -TEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVY 277

Query: 492 TMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
             G   +G+LG     +  +VP +V+    E  + +V+CG  H  ALT   +++++G+G 
Sbjct: 278 AWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALTRDGRMFSYGRGD 336

Query: 550 NGQLGHGDKDNRNSPTLV------------DFLKDKQVKRVVCGLNFTAIIC 589
           +G+LG+G K     P  V            D     Q + V CG   T  I 
Sbjct: 337 HGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 16/193 (8%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
           +V  IA GA H + +T+ G +++WG    G+LG G     S P  +E LS +++  +A G
Sbjct: 204 NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAG 263

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
            +H+ A+T+ G++Y WG G +  G LG G  K S  +P+KV   L G  +  +SCG  H+
Sbjct: 264 GWHSTALTKEGEVYAWGRGEH--GRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHS 320

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV------------ETLRGLRTTRVSCG 411
             +T  G +F++G G  G LG+G  ++T  P EV            ++    +   V+CG
Sbjct: 321 VALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACG 380

Query: 412 VWHTAAVVVATDS 424
             HT A+   T++
Sbjct: 381 GRHTLAIATWTEA 393



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 26/146 (17%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKA 237
           +SL  + +   H +A       G+V+ WG G         EH R+G+   + +  ++P+ 
Sbjct: 255 LSLVDIAAGGWHSTA---LTKEGEVYAWGRG---------EHGRLGFGDDKSSH-MVPQK 301

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI----- 292
           VE     D+  ++CG  H+V +T+ G +FS+G    GRLG+GR+    HP  + I     
Sbjct: 302 VELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPP 361

Query: 293 -LSGVN------VELVACGEYHTCAV 311
             SG +         VACG  HT A+
Sbjct: 362 GTSGGDSGGQWQARYVACGGRHTLAI 387



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 3/130 (2%)

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
           + P  S+    +  WG G+ G+LG G  E   +   VA L    +  V  G   S+A+  
Sbjct: 2   APPPASSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICA 61

Query: 487 SGHVYTMGSAAYGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
            G ++T G    G LG P        P  VD     S V + A G +H  A+    + Y 
Sbjct: 62  DGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIV-QAAIGGWHCLAVDDKGRAYA 120

Query: 545 WGKGANGQLG 554
           WG    GQ G
Sbjct: 121 WGGNEYGQCG 130


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 39/363 (10%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K+   L+ I +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKGAN--GQLGHGDK--DNRNSPTLV---DFLKDKQVKRVVCGLNFTAIICLHKW 593
           +V ++G G +   +  H +   +N +   L+   DF+ D QVK +  G  +   +  H+ 
Sbjct: 308 QVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV-DVQVKHIFAG-TYANFVTTHQD 365

Query: 594 VSS 596
            SS
Sbjct: 366 TSS 368



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+ + +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L D  I QV+CGH  S+AL+    V++ G  ++GQLG+       
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEF 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  V  LK+  V  + CG   TA++
Sbjct: 227 PLSVGALKNLGVVYISCGDAHTAVL 251



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P +V
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSV 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  ++    H        P  ++ N D      IS
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTH--------PEALTENFD------IS 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +     V     H+F     +F    H D  ST  P
Sbjct: 336 CLISAEDFVDVQVKHIFAGTYANF-VTTHQDTSSTRAP 372


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 179/399 (44%), Gaps = 46/399 (11%)

Query: 178 RISLSSVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPK 236
           RI   S ++S + G+ H       G V+ WG   ++G LG G         R   A LP 
Sbjct: 262 RIPTLSGITSVAAGTYHAVALGKDGTVWTWGSN-SSGQLGDGTWN-----DRAVPAPLPG 315

Query: 237 --AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
                +  +LD  ++A        + + G++ +WG  + G+LG G  AD S P L+  LS
Sbjct: 316 VGGARAVASLDAGSLA--------LLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELS 367

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
            V    V  G  H  A+ + G L+ WG G   +G LGHG      +P  V G     +++
Sbjct: 368 AVTA--VVGGAQHALALRKDGTLWAWGGGL--AGQLGHGGSERHVVPATVMGL---TNVT 420

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            ++ G +H+      G ++ +G  S+G LG G      +P  V    GL + R      H
Sbjct: 421 SMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVP---GLPSVRAVAAAGH 477

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
            + + VA D            G ++TWG    G+LG G    R  P  V+ L   ++  +
Sbjct: 478 HS-IAVAMD------------GTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAI 522

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVA-DGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G    +AL + G V+  G  A GQLG   + D L P RV G    + ++ VA G Y  
Sbjct: 523 AAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGL---APIQSVAAGTYFS 579

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKD 572
            AL +   V+TWG+G  GQLG G    R SP  V  L D
Sbjct: 580 MALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSD 618



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 200/445 (44%), Gaps = 56/445 (12%)

Query: 171 SSAAETFRISLSSVVSSSSHGSAHEDF-DSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
           S AA+  R++        + G+ H  F    G V+ WG G + G LGG +     SF R 
Sbjct: 54  SRAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWG-GNSAGQLGGAD----TSFQRL 108

Query: 230 TDALLP--KAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHP 287
           + A LP  + + S ++ D H++A GA         G +++WG  S G+LG G   D + P
Sbjct: 109 SPARLPVLEDIVSVVSGDAHSLALGA--------DGTVWTWGSNSSGQLGDGTTTDRAEP 160

Query: 288 QLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
           Q +E  +  +V  VA G++H+  +   G ++ W  GT   G LG G   +   P+ V G 
Sbjct: 161 QRVEGFT--DVVAVAAGDFHSLVLKSDGTVWAW--GTNFHGQLGQGHTQTGLWPKPVPG- 215

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L+G+    ++ G   T  V + G + ++G  SFG LG G       P  + TL G+  T 
Sbjct: 216 LEGV--VALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGI--TS 271

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+ G +H  AV +  D            G ++TWG    G+LG G    R  P   APL 
Sbjct: 272 VAAGTYH--AVALGKD------------GTVWTWGSNSSGQLGDGTWNDRAVP---APLP 314

Query: 468 DENICQVACGHDL-SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEE 525
                +     D  S+AL   G V   G+   GQLG    AD   P+ V  E+  S V  
Sbjct: 315 GVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP-EL--SAVTA 371

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           V  GA H  AL     ++ WG G  GQLGHG  +    P  V  L +  V  +  G +F 
Sbjct: 372 VVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTN--VTSMATG-SFH 428

Query: 586 AIICLHKWVSSVDHSVCSSCHNPFG 610
           ++  L       D SV +   N +G
Sbjct: 429 SLAALE------DGSVWAWGRNSYG 447



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 166/403 (41%), Gaps = 53/403 (13%)

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            DV ++A G + +V V   G  FSWG    G+LG G+      P  ++I       +V  G
Sbjct: 1069 DVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVG 1128

Query: 305  EY--HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLW 361
             +  H  A+   G L  WGD    +G LG G+       R   G + G+  ++ +S G W
Sbjct: 1129 AWGQHAVALMADGTLQAWGDNA--TGQLGDGTTTR----RSSPGEIRGVTRVTAVSTGAW 1182

Query: 362  HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            H+  +   G ++ +G   FG LG G   + ++P  V+ LR      ++ G +H+ AV   
Sbjct: 1183 HSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLR--DVVAIAAGGYHSVAV--- 1237

Query: 422  TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLS 481
                        S G ++TWG    G+LG G  E R  P  V  L  E +  V  G   S
Sbjct: 1238 -----------RSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKL--EGVQAVTGGDHHS 1284

Query: 482  VALTTSGHVYTMGSAAYGQLG-VPVADGLVPTR---VDGEIAESFVEEVACGAYHVAALT 537
            +AL   G V   G  A GQLG     D   P R   VDG      + EV  GA H  AL 
Sbjct: 1285 LALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDG------LTEVRAGAAHTVALG 1338

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSV 597
                V+TWG  A+GQLG    D    P +      + V + V GL     I    W    
Sbjct: 1339 KDGTVWTWGDNAHGQLG----DGVTGPRM------RLVPKPVSGLPAATAIGAGAW---- 1384

Query: 598  DHSVCSSC-HNPFGFRRKRHNCYNCGLVFCKACSSRKSLKAAL 639
             HS  S      F + R  H     G    +A   R  L + L
Sbjct: 1385 -HSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGL 1426



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 189/428 (44%), Gaps = 71/428 (16%)

Query: 201 GDVFIWGEGIANGFLG--GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           G V+ WGEG   G LG  GG  R           L P AV+     D+ NI+ G+ HA+ 
Sbjct: 586 GTVWTWGEGF-EGQLGDGGGVQR-----------LSPVAVKGLS--DIRNISVGSAHALA 631

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           V   G +++WG+ + G+LG G   D   P  +  L+G+    V+ G  H+ A+   G + 
Sbjct: 632 VRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHADGTVR 689

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WG   Y  G LG G+  S  +P  + G L GI    +  G  H   + +   L  +G  
Sbjct: 690 AWGSNGY--GQLGDGTLTSRVLPSVIPG-LSGIQ--ALHPGHLHVLALHADKTLRGWGYN 744

Query: 379 SFGALGHGDHISTSIPREVETLRGL-RTTRVSCGVWHTAAV-----VVATDSSSSSPSG- 431
            FG LG G    ++ P +V   RG+ R  R++ G  H   V     VVA  +++S   G 
Sbjct: 745 RFGQLGLGAAGWSARPVQV---RGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGD 801

Query: 432 -------------STSC-----------------GKLFTWGDGDKGRLGHGDKEPRLFPE 461
                          SC                 G ++TWG+  +G+LG G    R+ P 
Sbjct: 802 GGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPG 861

Query: 462 CVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAE 520
            V  L  E I  VA G D S+AL + G V+  G+ A GQ+G   V D L P R++   A 
Sbjct: 862 RVEGL--EGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIE---AL 916

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
           S V  +A G  H  A+     V+ WG  A+GQLG G +     P  V  L+   V  V  
Sbjct: 917 SDVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEG--VGSVAA 974

Query: 581 GLNFTAII 588
           G  F+  +
Sbjct: 975 GRAFSLAV 982



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 186/435 (42%), Gaps = 53/435 (12%)

Query: 181  LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
            L  +V+ +  G       S G V+ WG   A+G +G G            D L P+ +E+
Sbjct: 866  LEGIVAVAGGGDTSLALRSDGTVWAWGAN-ASGQVGDGTVE---------DRLTPRRIEA 915

Query: 241  TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                DV  IA G  HA+ V + G +++WG  + G+LG G E     P  ++ L GV    
Sbjct: 916  LS--DVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGS-- 971

Query: 301  VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
            VA G   + AV   G  + W  G   SG LG GS  S  +P +V+ ++ G  L  +S G 
Sbjct: 972  VAAGRAFSLAVRDDGTAWAW--GANESGQLGDGSNQSRRVPHRVA-SVKG--LRAVSAGA 1026

Query: 361  WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVV 419
             H   +   G ++ +GD + G LG G    T + P+ V  L  + +  V+ G     +V 
Sbjct: 1027 HHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVES--VAAG--EQFSVA 1082

Query: 420  VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV--APLIDENICQVACG 477
            VA D            G  F+WG  + G+LG G   PRL P  V         +  V   
Sbjct: 1083 VAHD------------GTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAW 1130

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVD-GEI-AESFVEEVACGAYHVAA 535
               +VAL   G +   G  A GQLG    DG    R   GEI   + V  V+ GA+H  A
Sbjct: 1131 GQHAVALMADGTLQAWGDNATGQLG----DGTTTRRSSPGEIRGVTRVTAVSTGAWHSLA 1186

Query: 536  LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVS 595
            L     V+ WG    GQLG G    R  P  V  L+D  V     G +  A+        
Sbjct: 1187 LRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRDV-VAIAAGGYHSVAVRS------ 1239

Query: 596  SVDHSVCSSCHNPFG 610
              D +V +  +N FG
Sbjct: 1240 --DGTVWTWGYNTFG 1252



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 170/377 (45%), Gaps = 37/377 (9%)

Query: 238  VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
            +  + A  V  +    +HAV +   G + +WG+ + G+LG G     S P   EI     
Sbjct: 1116 IGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPG--EIRGVTR 1173

Query: 298  VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
            V  V+ G +H+ A+   G ++ WG   +  G LG G+  +  +P  V G  D   +  I+
Sbjct: 1174 VTAVSTGAWHSLALRLDGTVWAWGANGF--GQLGDGTTTARAVPVPVQGLRD---VVAIA 1228

Query: 358  CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
             G +H+  V S G ++T+G  +FG LG G   S ++P +V  L G++   V+ G  H+ A
Sbjct: 1229 AGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQA--VTGGDHHSLA 1286

Query: 418  VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACG 477
            +               + G +  WG    G+LG G +  R  P  +  +  + + +V  G
Sbjct: 1287 L--------------HADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDV--DGLTEVRAG 1330

Query: 478  HDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHVA 534
               +VAL   G V+T G  A+GQLG  V      LVP  V G  A +    +  GA+H  
Sbjct: 1331 AAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAAT---AIGAGAWHSF 1387

Query: 535  ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWV 594
            A       +TWG+ ++GQLG GD   R  P  +  L      +V+ G   T++    +  
Sbjct: 1388 ASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSG---LKVIAGGADTSLAMTQE-- 1442

Query: 595  SSVDHSVCSSCHNPFGF 611
              V  S  SS H   G 
Sbjct: 1443 -GVLMSWGSSLHGTLGL 1458



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 177/417 (42%), Gaps = 57/417 (13%)

Query: 201  GDVFIWGEGIANGFLG-GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLV 259
            G V+ WG   A+G LG GGE          T +LLP  V+      V ++A G   ++ V
Sbjct: 936  GTVWAWGAN-ASGQLGDGGE----------TPSLLPARVKGLEG--VGSVAAGRAFSLAV 982

Query: 260  TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
               G  ++WG    G+LG G       P  +  + G+    V+ G +H  A+   G ++ 
Sbjct: 983  RDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRA--VSAGAHHAMALGEDGAVWA 1040

Query: 320  WGDGTYNSGLLGHG-SKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            WGD T   G LG G S  +   P++V+   D   +  ++ G   +  V   G  F++G  
Sbjct: 1041 WGDNTL--GQLGDGTSAFTVMWPQRVAELSD---VESVAAGEQFSVAVAHDGTAFSWGSN 1095

Query: 379  SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
             +G LG G       P EV+       T V+ G W   AV +  D            G L
Sbjct: 1096 EYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMAD------------GTL 1143

Query: 439  FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
              WGD   G+LG G    R  P  +  +    +  V+ G   S+AL   G V+  G+  +
Sbjct: 1144 QAWGDNATGQLGDGTTTRRSSPGEIRGVT--RVTAVSTGAWHSLALRLDGTVWAWGANGF 1201

Query: 499  GQLGVPVADGL-----VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
            GQLG    DG      VP  V G      V  +A G YH  A+ S   V+TWG    GQL
Sbjct: 1202 GQLG----DGTTTARAVPVPVQGL---RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQL 1254

Query: 554  GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSCHNPFG 610
            G G  ++R  P  V  L+   V+ V  G + +  + LH      D +V    HN  G
Sbjct: 1255 GDGTSESRALPVQVHKLEG--VQAVTGGDHHS--LALH-----ADGTVSGWGHNASG 1302



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 47/341 (13%)

Query: 170  RSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQ 229
            RSS  E   ++  + VS+ +  S     D  G V+ WG   ANGF   G+   G + +R 
Sbjct: 1162 RSSPGEIRGVTRVTAVSTGAWHSLALRLD--GTVWAWG---ANGF---GQLGDGTTTARA 1213

Query: 230  TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
                +P  V+     DV  IA G  H+V V   G +++WG  + G+LG G     + P  
Sbjct: 1214 ----VPVPVQGLR--DVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQ 1267

Query: 290  IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNL 348
            +  L GV  + V  G++H+ A+   G +  WG   +N SG LG GS+   + P ++  ++
Sbjct: 1268 VHKLEGV--QAVTGGDHHSLALHADGTVSGWG---HNASGQLGDGSRTDRYTPVRLK-DV 1321

Query: 349  DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS----IPREVETLRGLR 404
            DG  L+ +  G  HT  +   G ++T+GD + G LG  D ++      +P+ V  L    
Sbjct: 1322 DG--LTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG--DGVTGPRMRLVPKPVSGLP--A 1375

Query: 405  TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA 464
             T +  G WH         S +S P         FTWG    G+LG GD  PR  P+ + 
Sbjct: 1376 ATAIGAGAWH---------SFASGPEEGA-----FTWGRNSHGQLGVGDNAPRAEPQRMK 1421

Query: 465  PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
             L    +  +A G D S+A+T  G + + GS+ +G LG+ V
Sbjct: 1422 LL--SGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGV 1460



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 149/328 (45%), Gaps = 37/328 (11%)

Query: 246  VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
            V  ++ GA H++ +   G +++WG    G+LG G     + P  ++ L   +V  +A G 
Sbjct: 1174 VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLR--DVVAIAAGG 1231

Query: 306  YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            YH+ AV   G ++TWG  T+  G LG G+  S  +P +V   L+G+    ++ G  H+  
Sbjct: 1232 YHSVAVRSDGTVWTWGYNTF--GQLGDGTSESRALPVQVH-KLEGVQ--AVTGGDHHSLA 1286

Query: 366  VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            + + G +  +G  + G LG G       P  ++ + GL  T V  G  HT  V +  D  
Sbjct: 1287 LHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGL--TEVRAGAAHT--VALGKD-- 1340

Query: 426  SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPR--LFPECVAPLIDENICQVACGHDLSVA 483
                      G ++TWGD   G+LG G   PR  L P+ V+ L           H  S A
Sbjct: 1341 ----------GTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWH--SFA 1388

Query: 484  LTTSGHVYTMGSAAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
                   +T G  ++GQLGV    P A+   P R+      S ++ +A GA    A+T  
Sbjct: 1389 SGPEEGAFTWGRNSHGQLGVGDNAPRAE---PQRMK---LLSGLKVIAGGADTSLAMTQE 1442

Query: 540  SKVYTWGKGANGQLGHGDKDNRNSPTLV 567
              + +WG   +G LG G    R SP  V
Sbjct: 1443 GVLMSWGSSLHGTLGLGVLGQRASPGRV 1470



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 165/392 (42%), Gaps = 41/392 (10%)

Query: 181 LSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVES 240
           L+SV++ ++ GS      S GDV+ WG   A G LG G            D L P  V  
Sbjct: 516 LTSVLAIAAGGSHVLALRSDGDVWAWGYN-ALGQLGDGT---------SGDKLTPVRVPG 565

Query: 241 TMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL 300
                + ++A G   ++ +   G +++WGE   G+LG G       P  ++ LS  ++  
Sbjct: 566 LA--PIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLS--DIRN 621

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++ G  H  AV   G ++ WGD   N G LG GS +  + P +V  NL GI  + +S G 
Sbjct: 622 ISVGSAHALAVRGDGTVWAWGD--NNEGQLGDGSWMDRFAPVQVR-NLTGI--TAVSGGR 676

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVV 420
            H+  + + G +  +G   +G LG G   S  +P  +  L G++         H   + +
Sbjct: 677 SHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPG----HLHVLAL 732

Query: 421 ATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDL 480
             D +            L  WG    G+LG G       P  V  +    + ++A G   
Sbjct: 733 HADKT------------LRGWGYNRFGQLGLGAAGWSARPVQVRGI--GRVERLAAGRAH 778

Query: 481 SVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           ++ +   G V   G+ A GQLG      G     V G    S    VA G  H   L   
Sbjct: 779 ALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVRG---VSCARSVASGGQHSLVLACD 835

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             V+TWG+   GQLG G    R +P  V+ L+
Sbjct: 836 GTVWTWGENQRGQLGDGTTSARVAPGRVEGLE 867



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 142/348 (40%), Gaps = 41/348 (11%)

Query: 230  TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
            T  +LP  +       +  +  G  H + +     +  WG    G+LG G     + P  
Sbjct: 705  TSRVLPSVIPGLSG--IQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQ 762

Query: 290  IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
            +  +    VE +A G  H   V   G +  WG     SG LG G        R V+  + 
Sbjct: 763  VRGIG--RVERLAAGRAHALLVRADGSVVAWG--ANASGQLGDGGTTHG--ARAVT--VR 814

Query: 350  GIHLSY-ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRV 408
            G+  +  ++ G  H+ V+   G ++T+G+   G LG G   +   P  VE L G+     
Sbjct: 815  GVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGI----- 869

Query: 409  SCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID 468
                    AV    D+S +      S G ++ WG    G++G G  E RL P  +  L D
Sbjct: 870  -------VAVAGGGDTSLAL----RSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSD 918

Query: 469  ENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-----LVPTRVDGEIAESFV 523
              +  +A G   ++A+   G V+  G+ A GQLG    DG     L+P RV G      V
Sbjct: 919  --VMVIALGESHALAVGEDGTVWAWGANASGQLG----DGGETPSLLPARVKG---LEGV 969

Query: 524  EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
              VA G     A+      + WG   +GQLG G   +R  P  V  +K
Sbjct: 970  GSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVK 1017



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 15/135 (11%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG+  A+G LG G      +  R    L+PK V    A     I  GA H+    
Sbjct: 1341 GTVWTWGDN-AHGQLGDG-----VTGPRMR--LVPKPVSGLPAATA--IGAGAWHSFASG 1390

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             +   F+WG  S G+LG G  A  + PQ +++LSG+ V  +A G   + A+T+ G L +W
Sbjct: 1391 PEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGLKV--IAGGADTSLAMTQEGVLMSW 1448

Query: 321  GD---GTYNSGLLGH 332
            G    GT   G+LG 
Sbjct: 1449 GSSLHGTLGLGVLGQ 1463


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 24/339 (7%)

Query: 235  PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
            P  V  T+   +  I CG RH + +   G + S G  S G+LG  ++ +      +E L 
Sbjct: 1702 PSPVSWTVPGVITKICCGDRHTLFLNADGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALG 1761

Query: 295  GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVSCWIPRKVSGNLDGIHL 353
             V    +ACG+ H  AV+ SG +++WG G     GLL   S  S   P KV   L    +
Sbjct: 1762 SVVA--MACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPS--SSHRPSKVPIPLPIPII 1817

Query: 354  SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGV 412
              ++CG  H+  +T  G +F++G  S G LG G  +     P  +  L G+  T+++ G 
Sbjct: 1818 Q-VACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGG 1876

Query: 413  WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NI 471
             H+  + +A         G+  CG+L      +KGR          F  C+ P +   ++
Sbjct: 1877 THSLFLTLADLVYCC---GANKCGQLGVNRVDEKGR----------FNICMVPALRPLSV 1923

Query: 472  CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV-ADGLVPTRVDGEIAESFVEEVACGA 530
              ++CG   S  LT  G VYT G  + GQLG    A+ + P  V G   +    ++ACG 
Sbjct: 1924 SFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAG--LDGPASQIACGR 1981

Query: 531  YHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
            +H   L S+ +++ +G GA GQ G+G  D+  +PTLV F
Sbjct: 1982 HHTLVLGSSGQLWAFGSGAKGQTGNGHNDSCLTPTLVQF 2020



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 131/275 (47%), Gaps = 48/275 (17%)

Query: 201  GDVFIWGEGIANGFLG-----GGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARH 255
            G VF WG G  +G LG        HR             P  V   + + +  +ACG  H
Sbjct: 1780 GHVFSWGAG-EDGQLGLLPTPSSSHR-------------PSKVPIPLPIPIIQVACGNSH 1825

Query: 256  AVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGVNVELVACGEYHTCAVTRS 314
            ++ +TK G++FSWG  S G+LG G+E  V H P +I  L+GV V  +A G  H+  +T +
Sbjct: 1826 SLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLA 1885

Query: 315  GDLYTWGDGTYNSGLLG------HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
              +Y  G      G LG       G    C +P      L  + +S+ISCG  H+AV+T 
Sbjct: 1886 DLVYCCGAN--KCGQLGVNRVDEKGRFNICMVP-----ALRPLSVSFISCGESHSAVLTK 1938

Query: 369  AGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             G ++TFGDGS G LGH    +   P+ V  L G   ++++CG  HT  +          
Sbjct: 1939 DGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDG-PASQIACGRHHTLVL---------- 1987

Query: 429  PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
                 S G+L+ +G G KG+ G+G  +  L P  V
Sbjct: 1988 ----GSSGQLWAFGSGAKGQTGNGHNDSCLTPTLV 2018



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 33/331 (9%)

Query: 264  EIFSWGEESGGRLG-HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            ++F WG+ S G+ G     + VS       + GV +  + CG+ HT  +   G++ + G 
Sbjct: 1684 QLFCWGDSSSGQFGPQAAPSPVSW-----TVPGV-ITKICCGDRHTLFLNADGNVLSCGH 1737

Query: 323  GTYNSGLLGHGSKVSCWIPRKVSGNLDGI-HLSYISCGLWHTAVVTSAGHLFTFGDGSFG 381
             +   G LG   K +     K+   ++ +  +  ++CG  H   V+++GH+F++G G  G
Sbjct: 1738 NS--QGQLGRQKKKN----GKIIAQVEALGSVVAMACGQDHCLAVSASGHVFSWGAGEDG 1791

Query: 382  ALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
             LG     S+S  P +V     +   +V+CG  H+ A+              T  G +F+
Sbjct: 1792 QLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLAL--------------TKGGDVFS 1837

Query: 441  WGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            WG    G+LG G + P +  P  +  L    + Q+A G   S+ LT +  VY  G+   G
Sbjct: 1838 WGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCG 1897

Query: 500  QLGVPVAD--GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
            QLGV   D  G     +   +    V  ++CG  H A LT   KVYT+G G+ GQLGH  
Sbjct: 1898 QLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHST 1957

Query: 558  KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              N   P LV  L D    ++ CG + T ++
Sbjct: 1958 SANEVKPKLVAGL-DGPASQIACGRHHTLVL 1987


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 77/375 (20%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--V 284
           S  T +L P  V S     V  ++ G  H+  VT  G++F+WG  S G+LG G+ A   V
Sbjct: 84  SSVTHSLEPIEV-SGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVV 142

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC------ 338
           S P+ ++ L+   V++VA G  H+ A T  G++ +W  G   +G LGHG K S       
Sbjct: 143 STPRKVDCLADARVKMVALGSEHSIATTEEGEVLSW--GAAGAGRLGHGHKTSILGFSIT 200

Query: 339 ---WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH-GDHISTSIP 394
              + PR +  NLDG+ +  I+ G+ H+A +   G LF FG  +    G  GD +  ++ 
Sbjct: 201 TSEYTPRLIK-NLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVV 259

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
            EV       +  V+CG +HT    V TDS           G L++WG  + G LG G  
Sbjct: 260 EEVPF-----SEEVACGGYHTC---VVTDS-----------GDLYSWGSNENGCLGLGGT 300

Query: 455 EPRLFPECV-APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
           +    PE + + L    + +V+CG     A+ + G +YT G           A+G     
Sbjct: 301 DMVRSPEVLKSSLFKFPVSKVSCGWK-HTAVISGGDIYTWGWGG--------ANG----- 346

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
                  +F EE                    G  + GQLGHG+  +   P +V+F K+ 
Sbjct: 347 -------TFFEE--------------------GHSSGGQLGHGNDVDYFEPMMVEFGKNA 379

Query: 574 QVKRVVCGLNFTAII 588
           +   V CG N T  I
Sbjct: 380 RAVHVSCGFNHTGAI 394



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           VS+ +H S     D  G +F WG   ++G LG G+ R G   S       P+ V+     
Sbjct: 105 VSAGNHHSCAVTAD--GKLFAWGRN-SSGQLGLGK-RAGKVVST------PRKVDCLADA 154

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSG 295
            V  +A G+ H++  T++GE+ SWG    GRLGHG +  +           P+LI+ L G
Sbjct: 155 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDG 214

Query: 296 VNV------------------------------------------------ELVACGEYH 307
           V +                                                E VACG YH
Sbjct: 215 VKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYH 274

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           TC VT SGDLY+W  G+  +G LG G       P  +  +L    +S +SCG  HTAV+ 
Sbjct: 275 TCVVTDSGDLYSW--GSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI- 331

Query: 368 SAGHLFTFG----DGSF--------GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           S G ++T+G    +G+F        G LGHG+ +    P  VE  +  R   VSCG  HT
Sbjct: 332 SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHT 391

Query: 416 AAV 418
            A+
Sbjct: 392 GAI 394



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 130/291 (44%), Gaps = 35/291 (12%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           +T SG ++    G  + G LG GS V+  + P +VSG  +   +  +S G  H+  VT+ 
Sbjct: 63  LTESGRVFA--AGLNDFGQLGIGSSVTHSLEPIEVSGFDE--KVVEVSAGNHHSCAVTAD 118

Query: 370 GHLFTFGDGSFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSS 427
           G LF +G  S G LG G       S PR+V+ L   R   V+ G  H+ A          
Sbjct: 119 GKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIA---------- 168

Query: 428 SPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGH 478
               +T  G++ +WG    GRLGHG K   L          P  +  L    I ++A G 
Sbjct: 169 ----TTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGM 224

Query: 479 DLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTS 538
             S  +   G ++  G       G    D L PT V+ E+   F EEVACG YH   +T 
Sbjct: 225 LHSACIDEKGTLFIFGQKTEKGFGRS-GDELRPTVVE-EVP--FSEEVACGGYHTCVVTD 280

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSP-TLVDFLKDKQVKRVVCGLNFTAII 588
           +  +Y+WG   NG LG G  D   SP  L   L    V +V CG   TA+I
Sbjct: 281 SGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 331


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 31/291 (10%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF+WG   ++    G + ++          LLPK   S    +   I  G     +++ 
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKI----------LLPKMAISFA--ESQQIEAGQYCTFVISS 423

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
            G + + G+ S GRLG G   + +  + +   + +   + +    + HT A+T  G +++
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+ ++   P+ + G L G  +  IS G  H+A VT  G L+T+G+G 
Sbjct: 484 WGDGDY--GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGD 541

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LGHGD  S ++P  V+ +  +   +V CG  HT A  V+ DS +           ++
Sbjct: 542 YGRLGHGDSNSRNVPTLVKDVSNV--GKVVCGSSHTIA--VSQDSRT-----------VW 586

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
           ++G GD G+LGHGD      P+ +  LI   I +V CG   S+ALT++G V
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 27/293 (9%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           ++++V++  E+F WG  S  +L  G +  +  P++   +S    + +  G+Y T  ++  
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISSD 424

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW---HTAVVTSAGH 371
           G +   G G+Y  G LG G   +    +K+  N D   ++ IS       HT  +TS G 
Sbjct: 425 GSVRACGKGSY--GRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 372 LFTFGDGSFGALGHGDHISTSIPREV-ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+ ++   P+ +   L G     +S G  H+A V            
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACV------------ 528

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT-SGH 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V CG   ++A++  S  
Sbjct: 529 --TDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRT 584

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKV 542
           V++ G    G+LG    + +   ++   +   F+++V CG+    ALTST +V
Sbjct: 585 VWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 142/278 (51%), Gaps = 23/278 (8%)

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           ++  V+ + +++ WG  +  S  L  GS+    +P+     +       I  G + T V+
Sbjct: 367 NSLVVSENSEVFVWGSNS--SHQLAEGSQEKILLPKMA---ISFAESQQIEAGQYCTFVI 421

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           +S G +   G GS+G LG GD  + +  +++     +  TR+S           ++  S 
Sbjct: 422 SSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSI-ITRIS-----------SSKGSD 469

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALT 485
                 TS G++F+WGDGD G+LGHG+   + +P+ +   L+ + +  ++ G+  S  +T
Sbjct: 470 GHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVT 529

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VY 543
             G +YT G   YG+LG   ++   VPT V      S V +V CG+ H  A++  S+ V+
Sbjct: 530 DDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV---SNVGKVVCGSSHTIAVSQDSRTVW 586

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           ++G G NG+LGHGD +    P +++ L    +K+V CG
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCG 624



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++ VV+    +F +G  S   L  G      +P+   +     + ++  G + T   V++
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFA--ESQQIEAGQYCT--FVIS 422

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL------FPECVAPLIDENICQVA 475
           +D S  +      CGK      G  GRLG GD   +       F   +   I  +  + +
Sbjct: 423 SDGSVRA------CGK------GSYGRLGLGDSNNQTQLKKLNFDNSIITRISSS--KGS 468

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            GH L  ALT+ G V++ G   YG+LG         P  + G +    V  ++ G  H A
Sbjct: 469 DGHTL--ALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSA 526

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +T   ++YTWG+G  G+LGHGD ++RN PTLV  + +  V +VVCG + T  +
Sbjct: 527 CVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSN--VGKVVCGSSHTIAV 578


>gi|85001023|ref|XP_955230.1| chromosome condensation (RCC1 homologue) protein [Theileria
           annulata strain Ankara]
 gi|65303376|emb|CAI75754.1| chromosome condensation (RCC1 homologue) protein, putative
           [Theileria annulata]
          Length = 759

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 199/451 (44%), Gaps = 72/451 (15%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSL-GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKA 237
           I L + V + S GS H    ++ G ++ WG G A G LG G        S     +  K 
Sbjct: 166 IGLRNNVVTISCGSNHTLVTTVDGCMYSWGVG-AYGVLGNG--------SVANRYIPVKV 216

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN 297
           +     + +   A G+RH++ + +QG ++SWG    GRLG G       P LIEI     
Sbjct: 217 IFPYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYE 276

Query: 298 VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
           V  ++CG+ H+  + R G +YTW  G+   G LG G+ +S  +   V  +L GIH+  +S
Sbjct: 277 VFQISCGDSHSACLDRFGTVYTW--GSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVS 334

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI---STSIPRE-VETLRGLRTTRVSCGVW 413
           CG  +T  ++S G ++ +G  + G     D +   +  +P+  VET  G +   V+ G +
Sbjct: 335 CGTGNTLALSSTGKIYQWGS-TLGFNKQTDGLISHTVYLPQPVVET--GFKNIFVTSGPY 391

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA--------- 464
             AA+ +               G L TWG G   RLGHGD +  + P+ V+         
Sbjct: 392 SFAAINIF--------------GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYID 437

Query: 465 -----------------------PLIDENICQVACGHDLSVALTTSGHVYTMG---SAAY 498
                                  P  +  I Q+A G      LT +G VYT G      Y
Sbjct: 438 NLLKTYDEAAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGTGY 497

Query: 499 GQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
                 + +   P   +     S + ++ACG+ H  A+T    +++WG   NGQLGHGD 
Sbjct: 498 NSSSEALENYCEPILFNH--FSSKITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDL 555

Query: 559 DNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            NR  P  V+ +++     V  G++ +  IC
Sbjct: 556 RNRVVPDSVNTIEN--CINVFAGIDNSGCIC 584



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 168/377 (44%), Gaps = 58/377 (15%)

Query: 234 LPKAVESTMALDVHNIACGARH-AVLV------TKQGEIFSWGEESGGRLGHGREAD--- 283
            P+ +       V  ++CG  H AVLV         G +F++G  + GRLG+  + +   
Sbjct: 80  FPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMNAGTVFTFGLGNSGRLGYHIDTNSEI 139

Query: 284 ----------------VSHPQLIEILSGV--NVELVACGEYHTCAVTRSGDLYTWGDGTY 325
                              PQ + +  G+  NV  ++CG  HT   T  G +Y+WG G Y
Sbjct: 140 LSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGSNHTLVTTVDGCMYSWGVGAY 199

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G+LG+GS  + +IP KV    D I +S  + G  H+  +   G+++++G G  G LG 
Sbjct: 200 --GVLGNGSVANRYIPVKVIFPYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGL 257

Query: 386 GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
           G+  S   P  +E        ++SCG  H+A +                 G ++TWG   
Sbjct: 258 GNTRSYFTPNLIEIFDTYEVFQISCGDSHSACL--------------DRFGTVYTWGSCR 303

Query: 446 KGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV- 503
            G+LG G+     L P  V  L   +I QV+CG   ++AL+++G +Y  GS     LG  
Sbjct: 304 GGKLGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTLALSSTGKIYQWGST----LGFN 359

Query: 504 PVADGLVPTRVDGEIAESFVEE------VACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
              DGL+   V   + +  VE       V  G Y  AA+     + TWG G   +LGHGD
Sbjct: 360 KQTDGLISHTV--YLPQPVVETGFKNIFVTSGPYSFAAINIFGDLLTWGLGTGYRLGHGD 417

Query: 558 KDNRNSPTLVDFLKDKQ 574
             +   P  V +L+ + 
Sbjct: 418 SKDHVIPKFVSYLRTRM 434



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 32/250 (12%)

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           TS  ++ ++G   F  LG G  ++TS  PR +    G R T+VSCG +H+A +V ++  +
Sbjct: 53  TSYLNVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSREN 112

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEPRLF-----------PECVAPL------- 466
            ++       G +FT+G G+ GRLG H D    +            P    P+       
Sbjct: 113 MNA-------GTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMS 165

Query: 467 --IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFV 523
             +  N+  ++CG + ++  T  G +Y+ G  AYG LG   VA+  +P +V     + F+
Sbjct: 166 IGLRNNVVTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFI 225

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
            + A G+ H  AL     V++WG G NG+LG G+  +  +P L++     +V ++ CG +
Sbjct: 226 SKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDS 285

Query: 584 FTAIICLHKW 593
            +A  CL ++
Sbjct: 286 HSA--CLDRF 293



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 58/320 (18%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT-------S 368
           ++ +WG   +N   LG G +V+     +V     G  ++ +SCG +H+AV+        +
Sbjct: 57  NVLSWGKVPFNC--LGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMN 114

Query: 369 AGHLFTFGDGSFGALGHGDHISTS---------------------IPREVETLRGLR--T 405
           AG +FTFG G+ G LG+  HI T+                     +P+ V    GLR   
Sbjct: 115 AGTVFTFGLGNSGRLGY--HIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNV 172

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVA 464
             +SCG  HT    V               G +++WG G  G LG+G    R  P + + 
Sbjct: 173 VTISCGSNHTLVTTVD--------------GCMYSWGVGAYGVLGNGSVANRYIPVKVIF 218

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESF- 522
           P  D  I + A G   S+AL   G+V++ G    G+LG+        P  +  EI +++ 
Sbjct: 219 PYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLI--EIFDTYE 276

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCG 581
           V +++CG  H A L     VYTWG    G+LG G+   +   PT+V+ LK   + +V CG
Sbjct: 277 VFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVSCG 336

Query: 582 LNFTAIIC----LHKWVSSV 597
              T  +     +++W S++
Sbjct: 337 TGNTLALSSTGKIYQWGSTL 356



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 88/421 (20%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL------LPKAVESTMALDVHNIA 250
             S G ++ WG  +               F++QTD L      LP+ V  T   ++  + 
Sbjct: 343 LSSTGKIYQWGSTLG--------------FNKQTDGLISHTVYLPQPVVETGFKNIF-VT 387

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL----------------- 293
            G      +   G++ +WG  +G RLGHG   D   P+ +  L                 
Sbjct: 388 SGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAA 447

Query: 294 ---------SGVN------VELVACGEYHTCAVTRSGDLYTWG--DGT-YNSGLLGHGSK 335
                      +N      ++ +A G+ H   +T +G +YTWG  +GT YNS       +
Sbjct: 448 FKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGTGYNSS--SEALE 505

Query: 336 VSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
             C     +  N     ++ I+CG  HT  +T  G LF++G    G LGHGD  +  +P 
Sbjct: 506 NYC---EPILFNHFSSKITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPD 562

Query: 396 EVETLR-------GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGR 448
            V T+        G+  +   C V H    ++  +  +    GS++CGKL          
Sbjct: 563 SVNTIENCINVFAGIDNSGCICSVSHEN--MMKDEYGTLWVFGSSTCGKL---------G 611

Query: 449 LGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVAD 507
           LG       + P  +  +    +  +A G   S+ALT  G +Y  G+ + G+LG     +
Sbjct: 612 LGENMTSTVMTPREITTI--TGVHSLALGAMHSLALTHDGTLYASGAGSGGRLGTGDTTN 669

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             V  +V  +    FV  +A G+ H  A++  + +Y WG+G    L   D+D    PT++
Sbjct: 670 AFVFVQVKTD--HKFVA-IAAGSSHSLAISMENDLYGWGEGKYLTL---DEDFVLEPTII 723

Query: 568 D 568
           +
Sbjct: 724 N 724


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 149/332 (44%), Gaps = 22/332 (6%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELVACG 304
           V NI+    HA  VT+ G++F+ G+ S    GHG     +  P  IE L G   + VA G
Sbjct: 156 VVNISAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATG 215

Query: 305 EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
              T  +TR G +YT G  T+  G LGHG  +    P+ +        +  ++ G  +T 
Sbjct: 216 LSFTVILTREGQVYTCGSNTH--GQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTF 273

Query: 365 VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL--RGLRTTRVSCGVWHTAAVVVAT 422
            VT  G + +FG  +   LGHGD  +  +PR +++   R +   RVS G  H  A+    
Sbjct: 274 AVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 329

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSV 482
                      + G ++TWG G  G LGHGD+  +  PE +  L  +   QV      + 
Sbjct: 330 ----------DALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTF 379

Query: 483 ALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
            LT  G V   G   +G LG P    +D ++   V   +   +V +++ G YH  A+T+ 
Sbjct: 380 VLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNK 439

Query: 540 SKVYTWGKGANGQLGHGDKDNRNSPTLVDFLK 571
             V+ +G     QLG         PT + F K
Sbjct: 440 GIVFGFGDNERAQLGQEYIRGCLKPTEIMFHK 471



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 167/357 (46%), Gaps = 33/357 (9%)

Query: 180 SLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVE 239
           +LS VV+ S+  +        G VF  G+   N  L  G   VG +  R      P  +E
Sbjct: 152 ALSRVVNISAFHNHAAFVTETGQVFTCGD---NSSLCCGHGDVGRTIFR------PTQIE 202

Query: 240 STMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVN-V 298
           +        +A G    V++T++G++++ G  + G+LGHG   D + P++IE+  G + V
Sbjct: 203 ALKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPV 262

Query: 299 ELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYIS 357
             VA G  +T AVT  G ++++G  T  +  LGHG + +  +PR + S     IH+  +S
Sbjct: 263 VQVAAGASYTFAVTDDGTVHSFGSCT--NFCLGHGDQHNELLPRAIQSFKRRNIHVVRVS 320

Query: 358 CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            G  H   + + G+++T+G G  GALGHGD    + P  + +L+G    +V      T  
Sbjct: 321 AGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKT-- 378

Query: 418 VVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP--RLFPECVA-PLIDENICQV 474
             V TD            G +  +G    G LG  D+E   ++   CV   L    + Q+
Sbjct: 379 -FVLTDE-----------GSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQI 426

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGA 530
           + G   +VA+T  G V+  G     QLG     G L PT +     +S +E++A  A
Sbjct: 427 STGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI--MFHKSSMEDIAIAA 481



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 134/297 (45%), Gaps = 48/297 (16%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVS-CWIPRKVSG-------NLDGIH 352
           VA G YHT  V    D   +  G+   G+LGHG   + C    +VS        N+   H
Sbjct: 107 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFH 163

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI-PREVETLRGLRTTRVSCG 411
                    H A VT  G +FT GD S    GHGD   T   P ++E L+G    +V+ G
Sbjct: 164 --------NHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATG 215

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN- 470
           +  T  +              T  G+++T G    G+LGHGD   R  P+ +      + 
Sbjct: 216 LSFTVIL--------------TREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSP 261

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESF------V 523
           + QVA G   + A+T  G V++ GS     LG     + L+P  +     +SF      V
Sbjct: 262 VVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAI-----QSFKRRNIHV 316

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V+ G  H  AL +   VYTWG+G  G LGHGD++++ SP L+  LK  QV   VC
Sbjct: 317 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKG-QVAVQVC 372


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 23/360 (6%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH-GREADVS 285
           S  T  +    +E      V  ++    H+  V + G++ + G+ S    GH      + 
Sbjct: 146 SETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIF 205

Query: 286 HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
            P+L+E L G   + VA G + T  ++R G  YT G  T+  G LGHG  +   +P+ V 
Sbjct: 206 RPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVE 263

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GL 403
                  +  I+ G  +   +T  G +++FG GS   LGHG+      PR ++  +  G+
Sbjct: 264 FLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323

Query: 404 RTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV 463
              RVS G  H     VA DS+          G+++TWG G  G LGHGD+  ++ P+ +
Sbjct: 324 HILRVSAGDEHA----VALDSN----------GRVYTWGKGYCGALGHGDENDKITPQVL 369

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAE 520
             L +    QV      +  L   G +Y  G   +G LG P   V+D ++  RV   +  
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429

Query: 521 SFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             V +V+ G YH   +T   +++ +G     QLGH        PT + FL   + +  +C
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI-FLHCGRSRSRLC 488



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 33/318 (10%)

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +T Q E+F+  E +  RL    ++      ++E   G     +A G+YHT  +  S    
Sbjct: 76  LTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGK--MQIATGKYHTLLINNS---K 130

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            +  G   SG+L HGS+ +  +            ++ +S    H+A V  +G + T GD 
Sbjct: 131 VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDN 190

Query: 379 SFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           S    GH D  S  I  P+ VE L+G    +V+ G+  T  V ++ +            G
Sbjct: 191 SSHCCGHLD-TSRPIFRPKLVEALKGTPCKQVAAGLHFT--VFLSRE------------G 235

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACGHDLSVALTTSGHVYTMGS 495
             +T G    G+LGHGD   R  P+ V  L     + Q+A G    +ALT  G VY+ GS
Sbjct: 236 HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGS 295

Query: 496 AAYGQLGVPVADGLVPTRVDGEIAESF------VEEVACGAYHVAALTSTSKVYTWGKGA 549
            +   LG     G     +   + ++F      +  V+ G  H  AL S  +VYTWGKG 
Sbjct: 296 GSNFCLG----HGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY 351

Query: 550 NGQLGHGDKDNRNSPTLV 567
            G LGHGD++++ +P ++
Sbjct: 352 CGALGHGDENDKITPQVL 369



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 89/194 (45%), Gaps = 26/194 (13%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH--NIACGARHAVL 258
           G V+ +G G +N  LG GE         Q D L P+ +++     +H   ++ G  HAV 
Sbjct: 288 GSVYSFGSG-SNFCLGHGE---------QQDELQPRVIQAFKRKGIHILRVSAGDEHAVA 337

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLY 318
           +   G +++WG+   G LGHG E D   PQ++       V L  C     CA  R   + 
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVL-------VNLNNCLAVQVCARKRKTFVL 390

Query: 319 TWGDGTYNSGLLGHGS------KVSCWIPR-KVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
             G   Y  G +G GS       VS  + R +V   L    +S +S GL+HT VVT  G 
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGR 450

Query: 372 LFTFGDGSFGALGH 385
           +F FGD     LGH
Sbjct: 451 IFGFGDNERAQLGH 464



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 16/222 (7%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           I+ G +HT ++ ++  +++ G    G L HG           ET + +  T +       
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGS----------ETTQCVAFTPIEFPFPAQ 164

Query: 416 AAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF-PECVAPLIDENICQV 474
            A V AT + S+    S   G++ T GD      GH D    +F P+ V  L      QV
Sbjct: 165 VAQVSATQNHSAFVLQS---GQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           A G   +V L+  GH YT GS  +GQLG     D  VP  V+       V ++A G  +V
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQV 575
            ALT    VY++G G+N  LGHG++ +   P ++   K K +
Sbjct: 282 LALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHA 256
            DS G V+ WG+G   G LG G+         + D + P+ + +        +    R  
Sbjct: 338 LDSNGRVYTWGKGYC-GALGHGD---------ENDKITPQVLVNLNNCLAVQVCARKRKT 387

Query: 257 VLVTKQGEIFSWGEESGGRLG---HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
            ++ + G ++ +G    G LG    G    V  P+++E L    V  V+ G YHT  VT+
Sbjct: 388 FVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ 447

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV 344
            G ++ +GD       LGH S   C  P ++
Sbjct: 448 RGRIFGFGDN--ERAQLGHDSLRGCLEPTEI 476


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 121/217 (55%), Gaps = 17/217 (7%)

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVAC 303
           ++  I CG  H++ ++K GE+F+WG+ + G+LG GR  A    PQ++E LSGV +  ++ 
Sbjct: 83  NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISA 142

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           GE H+ A++ S ++Y+WG    + G LG G   +   P  +   LD   + +++CG  HT
Sbjct: 143 GEAHSMALSMSRNVYSWGRN--DCGQLGLGHTNNKDSPSLIEA-LDNQEVEFLACGGSHT 199

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
           A++T  G +FTFG G  G LGH    +   P  V  L G R T+++CG  HT A V    
Sbjct: 200 ALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYV---- 255

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                    +  GK+F++G G+ G+LG+G    +L P
Sbjct: 256 ---------SDLGKVFSFGSGEGGQLGNGATHHQLIP 283



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 29/269 (10%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILS 294
           PK ++    + +H++  GA H ++++  G+ F +               + H +   +L 
Sbjct: 33  PKCIKLGRKMKIHSMDQGAEHLLVLSSDGKPFEYN------------YSIEHARFQCVLQ 80

Query: 295 GVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLS 354
             N+  + CG+YH+ A+++ G+L+ WG  TY  G LG G   +     ++  +L G+ L 
Sbjct: 81  EKNIIQITCGDYHSLALSKGGELFAWGQNTY--GQLGVGRTFASTPTPQIVEHLSGVPLV 138

Query: 355 YISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWH 414
            IS G  H+  ++ + +++++G    G LG G   +   P  +E L       ++CG  H
Sbjct: 139 QISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSH 198

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           TA +              T  G +FT+G G  G+LGH   +  L P  V  L+ + + Q+
Sbjct: 199 TALL--------------TKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQI 244

Query: 475 ACGHDLSVALTTS-GHVYTMGSAAYGQLG 502
           ACG   ++A  +  G V++ GS   GQLG
Sbjct: 245 ACGRRHTLAYVSDLGKVFSFGSGEGGQLG 273



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWH 414
           I+CG +H+  ++  G LF +G  ++G LG G    ST  P+ VE L G+   ++S G  H
Sbjct: 87  ITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAH 146

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQV 474
           + A+ ++ +              +++WG  D G+LG G    +  P  +  L ++ +  +
Sbjct: 147 SMALSMSRN--------------VYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFL 192

Query: 475 ACGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHV 533
           ACG   +  LT  G V+T G+   GQLG     + L P  V  E+    V ++ACG  H 
Sbjct: 193 ACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVT-ELVGKRVTQIACGRRHT 251

Query: 534 AALTS-TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
            A  S   KV+++G G  GQLG+G   ++  P  +    ++++K
Sbjct: 252 LAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELK 295



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 18/205 (8%)

Query: 196 DFDSL-----GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIA 250
           D+ SL     G++F WG+         G+  VG +F+       P+ VE    + +  I+
Sbjct: 91  DYHSLALSKGGELFAWGQNTY------GQLGVGRTFASTPT---PQIVEHLSGVPLVQIS 141

Query: 251 CGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCA 310
            G  H++ ++    ++SWG    G+LG G   +   P LIE L    VE +ACG  HT  
Sbjct: 142 AGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTAL 201

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSA 369
           +T+ G ++T+G G    G LGH S  +   P  V+  L G  ++ I+CG  HT A V+  
Sbjct: 202 LTKDGLVFTFGAG--KCGQLGHNSTQNELTPCLVT-ELVGKRVTQIACGRRHTLAYVSDL 258

Query: 370 GHLFTFGDGSFGALGHGDHISTSIP 394
           G +F+FG G  G LG+G      IP
Sbjct: 259 GKVFSFGSGEGGQLGNGATHHQLIP 283



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 23/180 (12%)

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
           +++CG +H+ A+              +  G+LF WG    G+LG G    R F     P 
Sbjct: 86  QITCGDYHSLAL--------------SKGGELFAWGQNTYGQLGVG----RTFASTPTPQ 127

Query: 467 IDENI-----CQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAES 521
           I E++      Q++ G   S+AL+ S +VY+ G    GQLG+   +      +   +   
Sbjct: 128 IVEHLSGVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQ 187

Query: 522 FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
            VE +ACG  H A LT    V+T+G G  GQLGH    N  +P LV  L  K+V ++ CG
Sbjct: 188 EVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACG 247



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 78/129 (60%), Gaps = 3/129 (2%)

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT-RVDGEIA 519
           +CV  L ++NI Q+ CG   S+AL+  G ++  G   YGQLGV       PT ++   ++
Sbjct: 76  QCV--LQEKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLS 133

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVV 579
              + +++ G  H  AL+ +  VY+WG+   GQLG G  +N++SP+L++ L +++V+ + 
Sbjct: 134 GVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLA 193

Query: 580 CGLNFTAII 588
           CG + TA++
Sbjct: 194 CGGSHTALL 202


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 39/363 (10%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K+   L+ I +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKGAN--GQLGHGDK--DNRNSPTLV---DFLKDKQVKRVVCGLNFTAIICLHKW 593
           +V ++G G +   +  H +   +N +   L+   DF+ D QVK +  G  +   +  H+ 
Sbjct: 308 QVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV-DVQVKHIFAG-TYANFVTTHQD 365

Query: 594 VSS 596
            SS
Sbjct: 366 TSS 368



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+ + +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 338 CW------IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHIST 391
           CW      + R+ +    G  L   + G  H+ ++ +   + + GD S G LG       
Sbjct: 4   CWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG 63

Query: 392 SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGH 451
            +P  ++ L  L    VSCG  H+ AV                 G++F WG G +G+LG 
Sbjct: 64  ELPEPIQALETLIVDLVSCGKEHSLAVCHK--------------GRVFAWGAGSEGQLGI 109

Query: 452 GD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV 510
           G+ KE    P+ +  L D  I QV+CGH  S+AL+    V++ G  ++GQLG+       
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGL---GKEF 166

Query: 511 PTRVDGEIAESF----VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD---NRNS 563
           P++   +   S     + +VA G  H  AL+     + WG  + GQL    ++     N 
Sbjct: 167 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK 226

Query: 564 PTLVDFLKDKQVKRVVCGLNFTAII 588
           P  V  LK+  V  + CG   TA++
Sbjct: 227 PLSVGALKNLGVVYISCGDAHTAVL 251



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 28/218 (12%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P +V
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSV 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS 357
             + CG YHT A V  +G + ++G G  ++    H        P  ++ N D      IS
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTH--------PEALTENFD------IS 335

Query: 358 CGLWHTAVV-TSAGHLFTFGDGSFGALGHGDHISTSIP 394
           C +     V     H+F     +F    H D  ST  P
Sbjct: 336 CLISAEDFVDVQVKHIFAGTYANF-VTTHQDTSSTRAP 372


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 77/375 (20%)

Query: 227 SRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--V 284
           S  T +L P  V S     V  ++ G  H+  VT  G++F+WG  S G+LG G+ A   V
Sbjct: 109 SSVTHSLEPIEV-SGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVV 167

Query: 285 SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC------ 338
           S P+ ++ L+   V++VA G  H+ A T  G++ +W  G   +G LGHG K S       
Sbjct: 168 STPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSW--GAAGAGRLGHGHKTSILGFSIT 225

Query: 339 ---WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH-GDHISTSIP 394
              + PR +  NLDG+ +  I+ G+ H+A +   G LF FG  +    G  GD +  ++ 
Sbjct: 226 TSEYTPRLIK-NLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVV 284

Query: 395 REVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDK 454
            EV       +  V+CG +HT    V TDS           G L++WG  + G LG G  
Sbjct: 285 EEVPF-----SEEVACGGYHT---CVVTDS-----------GDLYSWGSNENGCLGLGGT 325

Query: 455 EPRLFPECV-APLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR 513
           +    PE + + L    + +V+CG     A+ + G +YT G           A+G     
Sbjct: 326 DMVRSPEVLKSSLFKFPVSKVSCGWK-HTAVISGGDIYTWGWGG--------ANG----- 371

Query: 514 VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDK 573
                  +F EE                    G  + GQLGHG+  +   P +V+F K+ 
Sbjct: 372 -------TFFEE--------------------GHSSGGQLGHGNDVDYFEPMMVEFGKNA 404

Query: 574 QVKRVVCGLNFTAII 588
           +   V CG N T  I
Sbjct: 405 RAVHVSCGFNHTGAI 419



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 43/342 (12%)

Query: 268 WGEESGGRLGHG----READVSHPQLIEILSGVNVEL----VACGEYHTCAVTRSGDLYT 319
           WG    GRLG G    R +  + P  +    G + +     +ACG  HT  +T SG ++ 
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 320 WGDGTYNSGLLGHGSKVSCWI-PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
              G  + G LG GS V+  + P +VSG  +   +  +S G  H+  VT+ G LF +G  
Sbjct: 97  --AGLNDFGQLGIGSSVTHSLEPIEVSGFDE--KVVEVSAGNHHSCAVTADGKLFAWGRN 152

Query: 379 SFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
           S G LG G       S PR+V+ L   R   V+ G  H+ A              +T  G
Sbjct: 153 SSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIA--------------TTEEG 198

Query: 437 KLFTWGDGDKGRLGHGDKEPRL---------FPECVAPLIDENICQVACGHDLSVALTTS 487
           ++ +WG    GRLGHG K   L          P  +  L    I ++A G   S  +   
Sbjct: 199 EVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEK 258

Query: 488 GHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           G ++  G       G    D L PT V+ E+   F EEVACG YH   +T +  +Y+WG 
Sbjct: 259 GTLFIFGQKTEKGFGRS-GDELRPTVVE-EVP--FSEEVACGGYHTCVVTDSGDLYSWGS 314

Query: 548 GANGQLGHGDKDNRNSP-TLVDFLKDKQVKRVVCGLNFTAII 588
             NG LG G  D   SP  L   L    V +V CG   TA+I
Sbjct: 315 NENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 131/303 (43%), Gaps = 82/303 (27%)

Query: 185 VSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMAL 244
           VS+ +H S     D  G +F WG   ++G LG G+ R G   S       P+ V+     
Sbjct: 130 VSAGNHHSCAVTAD--GKLFAWGRN-SSGQLGLGK-RAGKVVS------TPRKVDCLADS 179

Query: 245 DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSG 295
            V  +A G+ H++  T++GE+ SWG    GRLGHG +  +           P+LI+ L G
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDG 239

Query: 296 VNV------------------------------------------------ELVACGEYH 307
           V +                                                E VACG YH
Sbjct: 240 VKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYH 299

Query: 308 TCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVT 367
           TC VT SGDLY+W  G+  +G LG G       P  +  +L    +S +SCG  HTAV+ 
Sbjct: 300 TCVVTDSGDLYSW--GSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI- 356

Query: 368 SAGHLFTFG----DGSF--------GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHT 415
           S G ++T+G    +G+F        G LGHG+ +    P  VE  +  R   VSCG  HT
Sbjct: 357 SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHT 416

Query: 416 AAV 418
            A+
Sbjct: 417 GAI 419


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 19/265 (7%)

Query: 221 RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR 280
           ++G   ++ + +LL   VES   + V + +C   H+V+V+  G  FS+G    G+LG G 
Sbjct: 167 QLGLGSTKMSPSLL--LVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGT 224

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWI 340
             +   P  +E+ S   V L ACG+YHT  +T  G +++ G     +G LG GS+ S  +
Sbjct: 225 RPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNL--NGQLGLGSRSSTNV 282

Query: 341 PRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL 400
           P  ++  L     S I+CG  HT VV   G LFTFG    G LG G   S S P +VETL
Sbjct: 283 PTLIAA-LQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETL 341

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           R ++  ++SCG   T  +              +  G+L+++G    G+LG GD   RL P
Sbjct: 342 RNVKVVKISCGTHFTCVL--------------SESGELWSFGCNCHGQLGLGDSTDRLVP 387

Query: 461 ECVAPLIDENICQVACGHDLSVALT 485
             V  +  +N+ ++ACG    VA++
Sbjct: 388 VLVPSMTKKNLSEIACGFHHLVAIS 412



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 146/288 (50%), Gaps = 21/288 (7%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           GA H ++VT  G+++S G  + G+LG G         L+E L  V V   +C  +H+  V
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVV 203

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYIS-CGLWHTAVVTSAG 370
           +  G  +++G    + G LG G++ +  +P +V   L   HL  ++ CG +HT  +T  G
Sbjct: 204 SSDGSAFSFG--LNDCGQLGIGTRPNQLLPHRV--ELPSPHLVRLAACGQYHTIFLTEEG 259

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
            +F+ G    G LG G   ST++P  +  L+    + ++CG  HT   VV  D       
Sbjct: 260 MVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTC--VVLED------- 310

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
                GKLFT+G   +G+LG G  +    P  V  L +  + +++CG   +  L+ SG +
Sbjct: 311 -----GKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGEL 365

Query: 491 YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALT 537
           ++ G   +GQLG+    D LVP  V   + +  + E+ACG +H+ A++
Sbjct: 366 WSFGCNCHGQLGLGDSTDRLVPVLVP-SMTKKNLSEIACGFHHLVAIS 412



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 181/399 (45%), Gaps = 40/399 (10%)

Query: 207 GEGIANGFLGGGEHRVGY----SFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQ 262
           GEG   G    G++R G     +F  Q +  L   V+S     +  +A G+  +  +T++
Sbjct: 36  GEGDC-GVFACGQNRKGELGHSTFREQVEMSL---VQSLRRKRIVKVAAGSETSYFLTEE 91

Query: 263 GEIFSWGEESGGRLG---HGREADVS--HPQLIEILSGV----NVELVAC--GEYHTCAV 311
           G+++  G  S G+L    H   A+ S  +   IE++ G+     V  V+C  G  H   V
Sbjct: 92  GKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVV 151

Query: 312 TRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
           T +G +Y+ G    N G LG GS K+S  +    S  L  + +   SC   H+ VV+S G
Sbjct: 152 TSAGQVYSCG--CNNHGQLGLGSTKMSPSLLLVES--LKHVRVLSASCSYHHSVVVSSDG 207

Query: 371 HLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
             F+FG    G LG G   +  +P  VE          +CG +HT  +            
Sbjct: 208 SAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFL------------ 255

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
             T  G +F+ G    G+LG G +     P  +A L +     +ACG+  +  +   G +
Sbjct: 256 --TEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKL 313

Query: 491 YTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           +T G    GQLG+   D +  P +V+  +    V +++CG +    L+ + +++++G   
Sbjct: 314 FTFGYNHQGQLGLGHTDSVSSPMQVE-TLRNVKVVKISCGTHFTCVLSESGELWSFGCNC 372

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +GQLG GD  +R  P LV  +  K +  + CG +    I
Sbjct: 373 HGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 133/271 (49%), Gaps = 31/271 (11%)

Query: 233 LLPKAVESTMALDVHNIAC----GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           L P+ ++S   L    IAC       H VL T +GE+FSWG  + G+LG+G       P 
Sbjct: 87  LEPRRLDS---LSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPS 143

Query: 289 LIEI-LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            I   LS   V  VACG YH+  +T  G+++ WG    NSG +G GS  +  IPR+V+G 
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTANQAIPRRVTGC 201

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L    +  I+CG   +  V   G ++ +G    G LG G   +   P  V  L+G+R  R
Sbjct: 202 LQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR 261

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+CG  HT   +V TD            G+++ WG    G+LG G+K  + +P    P++
Sbjct: 262 VACGYAHT---LVLTDE-----------GQVYAWGANSYGQLGTGNKSNQSYP---TPVV 304

Query: 468 DEN--ICQVACGHD--LSVALTTSGHVYTMG 494
            E   I ++A  H    S A T  GHVY  G
Sbjct: 305 VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 128/265 (48%), Gaps = 26/265 (9%)

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW----HTAVVTSAGHLFTFGDG 378
           GT  SG LG G   S   PR+    LD +    I+C  +    H  + T+ G +F++G  
Sbjct: 71  GTNCSGCLGLGDVQSTLEPRR----LDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHN 126

Query: 379 SFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGK 437
           ++G LG+G      +P  + T L   + T V+CG +H+  +              TS G+
Sbjct: 127 AYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVL--------------TSDGE 172

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAP-LIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           +F WG  + G++G G    +  P  V   L ++ +  +ACG   S+A+  +G VY  G  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             GQLG+    +   P RV   +    V+ VACG  H   LT   +VY WG  + GQLG 
Sbjct: 233 GNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVC 580
           G+K N++ PT V   KD+ ++   C
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIEIAAC 316



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 15/219 (6%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           +F  G    G LG GD  ST  PR +++L      +++C  + +   +V           
Sbjct: 67  IFVLGTNCSGCLGLGDVQSTLEPRRLDSLS---DKKIACLSYGSGPHIVL---------- 113

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP-LIDENICQVACGHDLSVALTTSGHV 490
           +T+ G++F+WG    G+LG+G     L P  ++  L ++ + +VACG   S+ LT+ G V
Sbjct: 114 ATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 491 YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGA 549
           +  G    GQ+G    A+  +P RV G +    V  +ACG     A+  T +VY WG   
Sbjct: 174 FAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 233

Query: 550 NGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           NGQLG G   N+ +P  V  L+  +V+RV CG   T ++
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V+  + GS H     S G+VF WG    +G +G G      +  R+    L   V     
Sbjct: 154 VTEVACGSYHSLVLTSDGEVFAWGYN-NSGQVGSGS-TANQAIPRRVTGCLQNKV----- 206

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
             V NIACG   ++ V   GE++ WG    G+LG G   +   P  +  L G+ V+ VAC
Sbjct: 207 --VVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVAC 264

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  HT  +T  G +Y WG  +Y  G LG G+K +   P  V    D I +   +C   HT
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSTHT 321

Query: 364 -AVVTSAGHLFTFGD--GSFGALGHGDHISTS 392
            A  T  GH++ +G   G    L H  H S +
Sbjct: 322 SAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCT 353


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 174/427 (40%), Gaps = 90/427 (21%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQ 288
           +AL P  +E      + ++ACG +H++ V + G+++ WG    G+LG+G  + A+   P 
Sbjct: 16  EALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPV 75

Query: 289 LIEILSGVNVELVACGEYHTCAVTRSGDLYTWG------DGTYNSGLLGHGSKVSCWIPR 342
            +E L    V    CG  H  AVT  G LY WG      +G+ N    G    +S     
Sbjct: 76  RVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSD 135

Query: 343 KVSGNLDGIHLSY-------------------------------ISCGLWHTAV------ 365
           ++   +   H +Y                               +  GL H  V      
Sbjct: 136 RMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAG 195

Query: 366 ------VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
                 VTS G ++++G      LG G   + S+P+ V  L+G+     +CG  H+  + 
Sbjct: 196 YSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLL- 254

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID---------EN 470
                        ++ G ++T+G G  G+LGHG      FP  V  L+          E 
Sbjct: 255 -------------SAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGER 301

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLG-------------VPVADGLV---PTRV 514
           I Q+ACG   ++AL  SG V+T GSA YGQ G                +  ++   P  +
Sbjct: 302 IVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSL 361

Query: 515 DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQ 574
            G      +  V+CG  H  A      VY+WG G+ G LGHG+   +  P L+  +  ++
Sbjct: 362 SGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGER 421

Query: 575 VKRVVCG 581
           + +   G
Sbjct: 422 IVQTAAG 428



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 32/242 (13%)

Query: 199 SLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           S G+V+ WG      F    +  +G+ +++     +P+ V     + + +  CG +H+VL
Sbjct: 204 SQGEVYSWG------FNEKCQLGLGHRYNQS----VPQLVPHLQGVHIVSATCGQQHSVL 253

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL---------SGVNVELVACGEYHTC 309
           ++  G ++++G    G+LGHG  +D   P+ +E L         +G  +  +ACG +HT 
Sbjct: 254 LSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTL 313

Query: 310 AVTRSGDLYTWGDGTYN------------SGLLGHGSK-VSCWIPRKVSGNLDGIHLSYI 356
           A+  SG ++TWG   Y             +G     S  + C  PR +SG  DG H++++
Sbjct: 314 ALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHV 373

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           SCG  H       G ++++G GS+G LGHG+H    +P+ +  + G R  + + G  H+ 
Sbjct: 374 SCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSL 433

Query: 417 AV 418
           AV
Sbjct: 434 AV 435



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 114/262 (43%), Gaps = 70/262 (26%)

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGL-LGHGSKVSCWIPRKVS 345
           P+++  L  V V  VA G   + AVT  G++Y+WG   +N    LG G + +  +P+ V 
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWG---FNEKCQLGLGHRYNQSVPQLVP 234

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETL----- 400
            +L G+H+   +CG  H+ ++++AGH++TFG G FG LGHG       PR VE L     
Sbjct: 235 -HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEE 293

Query: 401 ----RGLRTTRVSCGVWHT--------------------------------------AAV 418
                G R  +++CG  HT                                      AA+
Sbjct: 294 GVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAM 353

Query: 419 VVATDSSSS-----SPSGSTSCGKL-----------FTWGDGDKGRLGHGDKEPRLFPEC 462
           + AT  S S           SCG L           ++WG G  G LGHG+   +L P+ 
Sbjct: 354 ICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKL 413

Query: 463 VAPLIDENICQVACG--HDLSV 482
           +  +  E I Q A G  H L+V
Sbjct: 414 IRRIGGERIVQTAAGAKHSLAV 435



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 114/322 (35%), Gaps = 70/322 (21%)

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           GT   G LG G      +   +     G  +  ++CG  H+  V   G ++ +G    G 
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 383 LGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           LG+G+  + +   P  VE LR  R     CG  H  AV V               GKL+ 
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVG--------------GKLYQ 106

Query: 441 W--------GDGDKGRLG--------HGDKEPRLF------------------------- 459
           W        G  +K   G        + D+  R+                          
Sbjct: 107 WGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQN 166

Query: 460 -----------PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVAD 507
                      PE V  L    + +VA G+  S+A+T+ G VY+ G     QLG+    +
Sbjct: 167 FGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYN 226

Query: 508 GLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
             VP  V   +    +    CG  H   L++   VYT+G G  GQLGHG   +   P  V
Sbjct: 227 QSVPQLVP-HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRV 285

Query: 568 DFLKDKQVKRVVCGLNFTAIIC 589
           + L   +      G     I C
Sbjct: 286 EALVPAEEGVESAGERIVQIAC 307


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 38/348 (10%)

Query: 250 ACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTC 309
           A G RH++L+     + S G+ S G+LG         P+ I+ L  + V+LV+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 310 AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSA 369
           AV   G ++ WG G+     +G   ++S + P+K+   L+ I +  +SCG +H+  ++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146

Query: 370 GHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
             +F++G  S G LG G    S + P+ V +L G+   +V+ G  H+ A+ +        
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-------- 198

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALT 485
                 CG  F WG    G+L    +   +    P  V  L +  +  ++CG   +  LT
Sbjct: 199 ------CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252

Query: 486 TSGHVYTMGSAAYGQLGV-PVADGLVPT---RVDGEIAESFVEEVACGAYH-VAALTSTS 540
             G V+T G    GQLG  P  +   P    R+DG      V ++ CG+YH +A + +T 
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTG 307

Query: 541 KVYTWGKGAN--GQLGHGDK--DNRNSPTLV---DFLKDKQVKRVVCG 581
           +V ++G G +   +  H +   +N +   L+   DF+ D QVK +  G
Sbjct: 308 QVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV-DVQVKHIFAG 354



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEI 292
           LP+ +++   L V  ++CG  H++ V  +G +F+WG  S G+LG G   ++S  P+ I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
           L+ + +  V+CG YH+ A+++   +++WG  ++  G LG G +       +   +L+GI 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRSLEGIP 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL---GHGDHISTSIPREVETLRGLRTTRVS 409
           L+ ++ G  H+  ++  G  F +G  S G L   G    + ++ P  V  L+ L    +S
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
           CG  HTA +              T  GK+FT+GD   G+LG+     +  P+ V   ID 
Sbjct: 243 CGDAHTAVL--------------TQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287

Query: 470 NICQVACG--HDLSVALTTSGHVYTMG 494
            + Q+ CG  H L+   TT G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTT-GQVVSFG 313



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 150/323 (46%), Gaps = 37/323 (11%)

Query: 266 FSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
           F WG +S   L   R A     +L++          A GE H+  +  +  + + GD + 
Sbjct: 3   FCWGADSR-ELQRRRTAGSPGAELLQ---------AASGERHSLLLLTNHRVLSCGDNS- 51

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G LG        +P  +   L+ + +  +SCG  H+  V   G +F +G GS G LG 
Sbjct: 52  -RGQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 386 GDHISTSI-PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDG 444
           G+    S  P+++ TL  ++  +VSCG +H+ A+  + DS            ++F+WG  
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL--SKDS------------QVFSWGKN 155

Query: 445 DKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG- 502
             G+LG G + P +  P+ V  L    + QVA G   S AL+  G  +  GS + GQL  
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215

Query: 503 ----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
               VPV     P  V G +    V  ++CG  H A LT   KV+T+G   +GQLG+   
Sbjct: 216 SGRNVPVQSN-KPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT 273

Query: 559 DNRNSPTLVDFLKDKQVKRVVCG 581
             +  P LV+ + D  V ++ CG
Sbjct: 274 PEKRGPQLVERI-DGLVSQIDCG 295



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 21/204 (10%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV 238
           I L+ V +  +H  A       G  F WG   A     G     G +   Q++   P +V
Sbjct: 181 IPLAQVAAGGAHSFA---LSLCGTSFGWGSNSA-----GQLALSGRNVPVQSNK--PLSV 230

Query: 239 ESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNV 298
            +   L V  I+CG  H  ++T+ G++F++G+   G+LG+    +   PQL+E + G+ V
Sbjct: 231 GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-V 289

Query: 299 ELVACGEYHTCA-VTRSGDLYTWGDGTYNSGLLGHGS------KVSCWIPRKVSGNLDGI 351
             + CG YHT A V  +G + ++G G  ++    H         +SC I    + +   +
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLIS---AEDFVDV 346

Query: 352 HLSYISCGLWHTAVVTSAGHLFTF 375
            + +I  G +   V T    +  F
Sbjct: 347 QVKHIFAGTYANFVTTHQVSIILF 370


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 31/294 (10%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +VF+WG   ++    G + ++          LLPK   S    +   I  G     +++ 
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKI----------LLPKMAISFA--ESQQIEAGQYCTFVISS 423

Query: 262 QGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC--GEYHTCAVTRSGDLYT 319
            G + + G+ S GRLG G   + +  + +   + +   + +    + HT A+T  G +++
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WGDG Y  G LGHG+ ++   P+ + G L G  +  IS G  H+A VT  G L+T+G+G 
Sbjct: 484 WGDGDY--GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGD 541

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
           +G LGHGD  S ++P  V+ +  +   +V CG  HT A  V+ DS +           ++
Sbjct: 542 YGRLGHGDSNSRNVPTLVKDVSNV--GKVVCGSSHTIA--VSQDSRT-----------VW 586

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
           ++G GD G+LGHGD      P+ +  LI   I +V CG   S+ALT++G + T 
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 27/298 (9%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRS 314
           ++++V++  E+F WG  S  +L  G +  +  P++   +S    + +  G+Y T  ++  
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISSD 424

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW---HTAVVTSAGH 371
           G +   G G+Y  G LG G   +    +K+  N D   ++ IS       HT  +TS G 
Sbjct: 425 GSVRACGKGSY--GRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 372 LFTFGDGSFGALGHGDHISTSIPREV-ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F++GDG +G LGHG+ ++   P+ +   L G     +S G  H+A V            
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACV------------ 528

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT-SGH 489
             T  G+L+TWG+GD GRLGHGD   R  P  V  +   N+ +V CG   ++A++  S  
Sbjct: 529 --TDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRT 584

Query: 490 VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGK 547
           V++ G    G+LG    + +   ++   +   F+++V CG+    ALTST ++ T+ K
Sbjct: 585 VWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTFIK 642



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 142/278 (51%), Gaps = 23/278 (8%)

Query: 307 HTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVV 366
           ++  V+ + +++ WG  +  S  L  GS+    +P+     +       I  G + T V+
Sbjct: 367 NSLVVSENSEVFVWGSNS--SHQLAEGSQEKILLPKMA---ISFAESQQIEAGQYCTFVI 421

Query: 367 TSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           +S G +   G GS+G LG GD  + +  +++     +  TR+S           ++  S 
Sbjct: 422 SSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSI-ITRIS-----------SSKGSD 469

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV-APLIDENICQVACGHDLSVALT 485
                 TS G++F+WGDGD G+LGHG+   + +P+ +   L+ + +  ++ G+  S  +T
Sbjct: 470 GHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVT 529

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSK-VY 543
             G +YT G   YG+LG   ++   VPT V      S V +V CG+ H  A++  S+ V+
Sbjct: 530 DDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV---SNVGKVVCGSSHTIAVSQDSRTVW 586

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           ++G G NG+LGHGD +    P +++ L    +K+V CG
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCG 624



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           ++ VV+    +F +G  S   L  G      +P+   +     + ++  G + T   V++
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFA--ESQQIEAGQYCT--FVIS 422

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL------FPECVAPLIDENICQVA 475
           +D S  +      CGK      G  GRLG GD   +       F   +   I  +  + +
Sbjct: 423 SDGSVRA------CGK------GSYGRLGLGDSNNQTQLKKLNFDNSIITRISSS--KGS 468

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVA 534
            GH L  ALT+ G V++ G   YG+LG         P  + G +    V  ++ G  H A
Sbjct: 469 DGHTL--ALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSA 526

Query: 535 ALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            +T   ++YTWG+G  G+LGHGD ++RN PTLV  + +  V +VVCG + T  +
Sbjct: 527 CVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSN--VGKVVCGSSHTIAV 578



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 13/121 (10%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G ++ WGEG   G LG G+     S SR    L+          +V  + CG+ H + V+
Sbjct: 532 GQLYTWGEG-DYGRLGHGD-----SNSRNVPTLVKDVS------NVGKVVCGSSHTIAVS 579

Query: 261 KQGE-IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           +    ++S+G    G+LGHG    +  P++IE L G+ ++ V CG   + A+T +G L T
Sbjct: 580 QDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCT 639

Query: 320 W 320
           +
Sbjct: 640 F 640


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 35/344 (10%)

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSGV 296
           VE+     V ++  G+R+++ +   G +F+WG    G LGH  E    + P  ++ L+ V
Sbjct: 32  VEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANV 91

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYNS-------GLLGHGSKVSCWIPRKVSGNLD 349
            +   A G +H  AV   G  Y WG   Y           +G   +    IP++ +  L 
Sbjct: 92  KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT 151

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
              +  ++ G  H+ V+T  GH++T+G         GD     +P  V+ L  +    ++
Sbjct: 152 ---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIFVPVRVQGLENVSI--IA 202

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE 469
            G +H  A+                 G+L  WG+ + G+LG GD +P   P  V  L D 
Sbjct: 203 VGAFHNLAL--------------EEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDL 248

Query: 470 NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD---GLVPTRVDGEIAESFVEEV 526
            +  +A G   S ALT  G VY  G   +G+LG    D    +VP +V+  +AE  + +V
Sbjct: 249 TLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN-LLAEEDIIQV 307

Query: 527 ACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFL 570
           +CG  H  ALT   +++++G+G +G+LG+G K     P  +  +
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIM 351



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 43/332 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT 324
           I +WG    G+LG G   +     ++E L   +V  V  G  ++ A+   G ++TWG   
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--- 63

Query: 325 YNS-GLLGHGSKVSCW-IPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
           +N  G LGH  +     IP +V   L  + ++  + G WH   V   G  + +G   +G 
Sbjct: 64  WNQRGTLGHPPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122

Query: 383 LGH---GDHISTSIPREVETLR----GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
            G     D +   + R++   +     L   +V+ G  H+  +              T  
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL--------------TRE 168

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G ++TWG         GD +    P  V  L  EN+  +A G   ++AL   G +   G+
Sbjct: 169 GHVWTWGQ----PWPPGDIKQIFVPVRVQGL--ENVSIIAVGAFHNLALEEDGRLLAWGN 222

Query: 496 AAYGQLGV----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
             YGQLG     P +    P  V G + +  + ++A G +H  ALT   +VY WG+G +G
Sbjct: 223 NEYGQLGTGDTQPTSH---PVPVHG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278

Query: 552 QLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
           +LG GD D  ++  P  V+ L ++ + +V CG
Sbjct: 279 RLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCG 310



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 47/231 (20%)

Query: 108 PFDFGDIQGTQVP-----LDNVSNNGLGKAFADIISYTE----AANTNSRADSVSFSPSP 158
           P+  GDI+   VP     L+NVS   +G AF ++    +    A   N      +    P
Sbjct: 177 PWPPGDIKQIFVPVRVQGLENVSIIAVG-AFHNLALEEDGRLLAWGNNEYGQLGTGDTQP 235

Query: 159 LTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGG 218
            ++  P +  D         ++L  + +   H +A  D    G+V+ WG G         
Sbjct: 236 TSHPVPVHGLDD--------LTLVDIAAGGWHSTALTD---KGEVYGWGRG--------- 275

Query: 219 EH-RVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           EH R+G+  + ++  ++P+ V      D+  ++CG  H+V +T+ G IFS+G    GRLG
Sbjct: 276 EHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 278 HGREADVSHPQLIEIL----------------SGVNVELVACGEYHTCAVT 312
           +GR+     P  + I+                   + + +ACG  HT A+ 
Sbjct: 336 YGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIV 386


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 19/218 (8%)

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE-ADVSHPQLIEILSGVNVELVA 302
           + VH +  G+  A   T  GE+F+WG+   G+LG GR+    + PQ++E L+GV +  ++
Sbjct: 73  VQVHQVLAGSGGAR--TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 130

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
            GE H+ A++ SG++Y+WG   +  G LG G   S   P  +   LD   + +++CG  H
Sbjct: 131 AGEAHSMALSMSGNIYSWGKNEF--GQLGLGHTESKDSPSLIEA-LDNQKVEFLACGGSH 187

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
           +A++T  G LFTFG G  G LGH    +   P  V  L G R T+++CG WHT A V   
Sbjct: 188 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV--- 244

Query: 423 DSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
                     +  GK+F++G G  G+LG+G    +L P
Sbjct: 245 ----------SDFGKVFSFGSGKDGQLGNGGTLDQLIP 272



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G++F WG+ + +G LG     VG  F   T    P+ VE    + +  I+ G  H++ ++
Sbjct: 90  GELFAWGQNL-HGQLG-----VGRKFPSTTT---PQIVEHLAGVPLAQISAGEAHSMALS 140

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
             G I+SWG+   G+LG G       P LIE L    VE +ACG  H+  +T+ G L+T+
Sbjct: 141 MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 200

Query: 321 GDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT-AVVTSAGHLFTFGDGS 379
           G G +  G LGH S  +   P  V+  L G  ++ I+CG WHT A V+  G +F+FG G 
Sbjct: 201 GAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 257

Query: 380 FGALGHGDHISTSIPREVET 399
            G LG+G  +   IP  V+ 
Sbjct: 258 DGQLGNGGTLDQLIPLPVKV 277



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 18/213 (8%)

Query: 367 TSAGHLFTFGDGSFGALGHGDHI-STSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           T +G LF +G    G LG G    ST+ P+ VE L G+   ++S G  H+ A+ ++    
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS---- 142

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                     G +++WG  + G+LG G  E +  P  +  L ++ +  +ACG   S  LT
Sbjct: 143 ----------GNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 192

Query: 486 TSGHVYTMGSAAYGQLG-VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST-SKVY 543
             G ++T G+  +GQLG     + L P  V  E+  + V ++ACG +H  A  S   KV+
Sbjct: 193 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDFGKVF 251

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVK 576
           ++G G +GQLG+G   ++  P  V     +++K
Sbjct: 252 SFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 284



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 100/218 (45%), Gaps = 24/218 (11%)

Query: 372 LFTFGDGSFGALGHGDHISTSI---PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           LF    G + AL     ++  I   PR +  L      R   GV      V+A    + +
Sbjct: 35  LFPSAAGFYRALLRRAEVTRQISCSPRRLAVLE-----RGGAGV--QVHQVLAGSGGART 87

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-----QVACGHDLSVA 483
           PSG     +LF WG    G+LG G K    FP    P I E++      Q++ G   S+A
Sbjct: 88  PSG-----ELFAWGQNLHGQLGVGRK----FPSTTTPQIVEHLAGVPLAQISAGEAHSMA 138

Query: 484 LTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           L+ SG++Y+ G   +GQLG+   +      +   +    VE +ACG  H A LT    ++
Sbjct: 139 LSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLF 198

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           T+G G +GQLGH    N   P LV  L   +V ++ CG
Sbjct: 199 TFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 236



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 7/110 (6%)

Query: 483 ALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF----VEEVACGAYHVAALTS 538
           A T SG ++  G   +GQLGV       P+    +I E      + +++ G  H  AL+ 
Sbjct: 85  ARTPSGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSM 141

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           +  +Y+WGK   GQLG G  ++++SP+L++ L +++V+ + CG + +A++
Sbjct: 142 SGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 191


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 195/485 (40%), Gaps = 96/485 (19%)

Query: 184 VVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           VV  S+  S     D  G ++ WG G   G LG G+         Q +  +P+ VE    
Sbjct: 306 VVFVSAGDSHSACIDRQGVLYTWGSG-GFGRLGHGD---------QGEIPVPRKVEGFGG 355

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL--V 301
           + V  +ACG  H + +T +G +F+WG      LG G +       + + LS + V +  V
Sbjct: 356 VPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNV 415

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH--------- 352
           A G YH+ AVT  GDL  WG G   S  LGHG + +   P+ V+   + ++         
Sbjct: 416 AAGPYHSAAVTVGGDLLVWGVG--GSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLG 473

Query: 353 -----------------------------LSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
                                        L  + CG  HT  +T  G ++ +G    G L
Sbjct: 474 VSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQL 533

Query: 384 GHGDHISTSIPREVETLRGLRTT--RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           G G+ +       V+ L    T   R++CG  H  AV                 G +F W
Sbjct: 534 GLGEQVEEDQYEPVK-LDCFSTPIRRIACGSKHCLAV--------------AQYGDVFAW 578

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG------------- 488
           G  D G+LG G   P   P  V  L       V CG D S  +T++G             
Sbjct: 579 GANDDGQLGLGVLRPSFEPAAVTAL--RQAIDVFCGDDYSACITSNGGAQTVSLALESGT 636

Query: 489 ---HVYTMGSAAYGQLGV--PVADG--LVPTRVDGEIAESFVEEVACGAYHVAALTSTSK 541
               ++T G+A  G+LG+   VA G  L P +V   +    V   + G  H  A+T+  +
Sbjct: 637 EFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVP---VCACSLGTSHALAITARGE 693

Query: 542 VYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK--WVSSVDH 599
            Y WG G  G+LG G   N  +PT  DF K  +++ V  G + +  + +    W+     
Sbjct: 694 CYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKE 753

Query: 600 SVCSS 604
             CS+
Sbjct: 754 DTCST 758



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 185/433 (42%), Gaps = 88/433 (20%)

Query: 184 VVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTM 242
           VV+  + G+ H     S G ++ WG G  NG LG G +R          +L P  V+  +
Sbjct: 253 VVTCCAAGAKHSMACTSDGTLWTWGHG-GNGRLGLGHNR---------GSLSPAVVDYIL 302

Query: 243 ALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             DV  ++ G  H+  + +QG +++WG    GRLGHG + ++  P+ +E   GV V  VA
Sbjct: 303 DRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVA 362

Query: 303 CGEYHTCAVTRSGDLYTWGDG-TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           CG +HT A+T  G ++ WG G     G    G      +P+ +S +++ + +  ++ G +
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLS-DIE-VAVLNVAAGPY 420

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR------------GLRTTR-- 407
           H+A VT  G L  +G G    LGHGD  +   P+ V  LR            G+   R  
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRD 480

Query: 408 -------------------------VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
                                    + CG  HT A+              T  G ++ WG
Sbjct: 481 YSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVAL--------------TGTGAVWVWG 526

Query: 443 DGDKGRLGHGDK-EPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQL 501
             D+G+LG G++ E   +           I ++ACG    +A+   G V+  G+   GQL
Sbjct: 527 SNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKHCLAVAQYGDVFAWGANDDGQL 586

Query: 502 GVPVADGLVPTRVDGEI-AESFVEEVACGAYHVAALTST----------------SKVYT 544
           G+ V   L P+     + A     +V CG  + A +TS                   ++T
Sbjct: 587 GLGV---LRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWT 643

Query: 545 WGKGANGQLGHGD 557
           WG   +G+LG G+
Sbjct: 644 WGAAESGKLGLGE 656



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 164/375 (43%), Gaps = 63/375 (16%)

Query: 246 VHNIACGARHAVLVTKQ-----GEIFSWGEESGGRLGH------------------GREA 282
           V  ++CG  ++ ++ K+     G+++++G  + GRLG+                  G+E 
Sbjct: 104 VFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQED 163

Query: 283 DVS----HPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSC 338
             S     P  +       +  ++CG  HT A++  G LY WG G+Y  G LG G     
Sbjct: 164 GPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSY--GNLGQGDTSDA 221

Query: 339 WIPRKV-------SG----NL-------DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSF 380
           + P +V       SG    NL       D + ++  + G  H+   TS G L+T+G G  
Sbjct: 222 YSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGN 281

Query: 381 GALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
           G LG G +  +  P  V+ +       VS G  H+A +                 G L+T
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACI--------------DRQGVLYT 327

Query: 441 WGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQ 500
           WG G  GRLGHGD+     P  V       + QVACG   ++ALT  G V+  G+     
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 501 LGVPVADGLVPTRVDGEIA--ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDK 558
           LG     G     V   ++  E  V  VA G YH AA+T    +  WG G + +LGHGD+
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 559 DNRNSPTLVDFLKDK 573
            N+  P  V  L+++
Sbjct: 448 QNQPFPKYVADLRNR 462



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 154/344 (44%), Gaps = 49/344 (14%)

Query: 246 VHNIACGARHAVLVTKQG---EIFSWGEESGGRLGHGREA-DVSHPQLIEILSGVNVELV 301
           V  +A G  H ++V  +G   ++ +WG+     LG G E  +   P L+   S   V  V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 302 ACGEYHTCAVTR-----SGDLYTWGDGTYNSGLLGH-------GSK-------------V 336
           +CG  ++  + +      G +YT+G G  N G LG+       G++              
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLG--NRGRLGYPKSKAEGGARQQGDDAGDGQEDGP 165

Query: 337 SCWIPRKVSGNL-DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPR 395
           S + P+       D   ++ ISCG  HT  ++  G L+ +G GS+G LG GD      P 
Sbjct: 166 SWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPV 225

Query: 396 EV----ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPS-GSTSCGKLFTWGDGDKGRLG 450
            V    E   G +   +  G   T  VVV   ++ +  S   TS G L+TWG G  GRLG
Sbjct: 226 RVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLG 285

Query: 451 HGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG------VP 504
            G     L P  V  ++D ++  V+ G   S  +   G +YT GS  +G+LG      +P
Sbjct: 286 LGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345

Query: 505 VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           V     P +V+G      V +VACG +H  ALT    V+ WG G
Sbjct: 346 V-----PRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAG 383



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 144/361 (39%), Gaps = 76/361 (21%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G V++WG     G LG GE         + D   P  ++   +  +  IACG++H + V 
Sbjct: 520 GAVWVWGSN-DEGQLGLGEQV-------EEDQYEPVKLD-CFSTPIRRIACGSKHCLAVA 570

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV--------- 311
           + G++F+WG    G+LG G       P  +  L    +++    +Y  C           
Sbjct: 571 QYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQA-IDVFCGDDYSACITSNGGAQTVS 629

Query: 312 ------TRSGDLYTWGDGTYNSGLLGHGSKV---SCWIPRKVSGNLDGIHLSYISCGLWH 362
                 T  GDL+TWG     SG LG G  V   S   P+KV  +   + +   S G  H
Sbjct: 630 LALESGTEFGDLWTWG--AAESGKLGLGEDVASGSILTPQKVPFS---VPVCACSLGTSH 684

Query: 363 TAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVAT 422
              +T+ G  + +G G +G LG G   +   P + +  +G+R   V+ G  H+ A+ +  
Sbjct: 685 ALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDG 744

Query: 423 D----------------------SSSSSPSGS----------------TSCGKLFTWGDG 444
           D                          SPSG                 T  G++F WGD 
Sbjct: 745 DLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDN 804

Query: 445 DKGRLGHGDKEPRLF--PECVAPLIDENICQ-VACGHDLSVALTTSGHVYTMGSAAYGQL 501
              + G G ++      PE +A L   N+CQ VA G   S  +  SG VY  G    G+L
Sbjct: 805 KLYQTGCGKRQAERLDRPEMIAGL--PNVCQWVATGPQASFFVLCSGEVYAAGVINGGRL 862

Query: 502 G 502
           G
Sbjct: 863 G 863



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 139/356 (39%), Gaps = 74/356 (20%)

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGD---LYTWGDGTYNSGLLGHGSKVSCWIPRKVSG 346
           I  L   +V+ VA G YHT  V   GD   L  WG   YN+ +LG G +    +   +  
Sbjct: 40  IARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGK-NYNN-VLGLGVETRERVFPGLVP 97

Query: 347 NLDGIHLSYISCGLWHTAVVT-----SAGHLFTFGDGSFGALGH---------------- 385
                 +  +SCG  ++AV+      S G ++TFG G+ G LG+                
Sbjct: 98  FFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDA 157

Query: 386 ------GDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
                 G    T  P  V      +  R+SCG  HT A+              +  G L+
Sbjct: 158 GDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLAL--------------SDGGALY 203

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVA----------------------PLIDENICQVACG 477
            WG G  G LG GD      P  V                       P++   +   A G
Sbjct: 204 AWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVV---VTCCAAG 260

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADG-LVPTRVDGEIAESFVEEVACGAYHVAAL 536
              S+A T+ G ++T G    G+LG+    G L P  VD  I +  V  V+ G  H A +
Sbjct: 261 AKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVD-YILDRDVVFVSAGDSHSACI 319

Query: 537 TSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHK 592
                +YTWG G  G+LGHGD+     P  V+      V +V CG  F  +   HK
Sbjct: 320 DRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACG-TFHTLALTHK 374



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 27/218 (12%)

Query: 193 AHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG 252
           A E     GD++ WG    +G LG GE     S       L P+ V    ++ V   + G
Sbjct: 631 ALESGTEFGDLWTWGAA-ESGKLGLGEDVASGSI------LTPQKV--PFSVPVCACSLG 681

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVT 312
             HA+ +T +GE ++WG    GRLG G  A+   P   +   GV +  VA G  H+ A++
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 313 RSGDLYTWGDG-------TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
             GDL+ WG          YNS  +    +    +P+  S          I+    H+  
Sbjct: 742 MDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKS----------IAAAEHHSLA 791

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGL 403
           VT  G +F +GD      G G   +  + R  E + GL
Sbjct: 792 VTETGEVFAWGDNKLYQTGCGKRQAERLDRP-EMIAGL 828


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 163/359 (45%), Gaps = 42/359 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADV---------SHPQLIEILSGV 296
           V ++ACG     ++ + G++++ G    G+   G    V         S  + + I SG 
Sbjct: 69  VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSG- 127

Query: 297 NVELVACGEYHTCAVTRSGDLYTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSY 355
                  G  H  A+  +G+LYT G   +N  G LG GS  +      V   L G  ++ 
Sbjct: 128 ------NGSEHLAALHANGNLYTVG---FNMRGQLGLGSSTTVMEATLVE-ELAGKRVAD 177

Query: 356 ISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWH 414
           + C  +HTA+V   G L+  G   +G LG GDH +   +PR VE         V+CG  +
Sbjct: 178 VGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHY 237

Query: 415 TAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG-HGDKEPRLFP-ECVAPLIDENIC 472
           T A              S   G +  +G  D G+LG     EP   P    APL    + 
Sbjct: 238 TIA--------------SLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVP 283

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLV-PTRVDGEIAESFVEEVACGAY 531
           Q++CG+  +  +T  G VYT G   YGQLG+     +  P RV+  +A   + +VACG Y
Sbjct: 284 QLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVE-SLARMRITQVACGCY 342

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICL 590
           H   L+   KV+ +G+  +GQLG     +  SP L+  L++K V +V  G  F   +CL
Sbjct: 343 HTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAG--FYHSVCL 399



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 153/371 (41%), Gaps = 61/371 (16%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLIEILS---GVNVELVACGEYHTCAVTRSGDLYTWG 321
           ++S+G+ + G L  G   D S P  +++ +   G  V  VACG   T  +   GD+YT G
Sbjct: 33  VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCG 92

Query: 322 DGTYNSGLLGHGSKV----------SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
                   +G   +V          S    R  SGN           G  H A + + G+
Sbjct: 93  YNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGN-----------GSEHLAALHANGN 141

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           L+T G    G LG G   +      VE L G R   V C  +HTA V+            
Sbjct: 142 LYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVM------------ 189

Query: 432 STSCGKLFTWGDGDKGRLGHGD-KEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
               G L+  G  D G+LG GD +   L P  V       +  VACG   ++A    G V
Sbjct: 190 --DNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGV 247

Query: 491 YTMGSAAYGQLGV-----PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
              G   +GQLG+     PV+    PTR+   +    V +++CG +H A +T    VYT+
Sbjct: 248 VAFGKNDHGQLGLDSTSEPVSQ---PTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTF 304

Query: 546 GKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLHKWVSSVDHSVCSSC 605
           G+   GQLG G K +   P  V+ L   ++ +V CG       C H  V S D  V    
Sbjct: 305 GRNDYGQLGLGHKMHMARPARVESLARMRITQVACG-------CYHTLVLSDDGKV---- 353

Query: 606 HNPFGFRRKRH 616
              F F R  H
Sbjct: 354 ---FPFGRNNH 361



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 135/278 (48%), Gaps = 26/278 (9%)

Query: 217 GGEHRVGYSFSRQ------TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGE 270
           G  + VG++   Q      T  +    VE      V ++ C   H  +V   G++++ G 
Sbjct: 140 GNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGC 199

Query: 271 ESGGRLGHG--READVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNS- 327
              G+LG G  R  ++  P+ +E      V  VACG+++T A  R G +  +G   +   
Sbjct: 200 NDYGQLGLGDHRNGELV-PRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQL 258

Query: 328 GLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGD 387
           GL      VS   P +++  LD + +  +SCG  HTAVVT  G ++TFG   +G LG G 
Sbjct: 259 GLDSTSEPVS--QPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGH 316

Query: 388 HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG 447
            +  + P  VE+L  +R T+V+CG +HT  +V++ D            GK+F +G  + G
Sbjct: 317 KMHMARPARVESLARMRITQVACGCYHT--LVLSDD------------GKVFPFGRNNHG 362

Query: 448 RLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
           +LG       L P+ ++ L ++ + +VA G   SV L 
Sbjct: 363 QLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 134/312 (42%), Gaps = 27/312 (8%)

Query: 252 GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           G+ H   +   G +++ G    G+LG G    V    L+E L+G  V  V C  +HT  V
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIV 188

Query: 312 TRSGDLYTWGDGTYNSGLLGHGS-KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAG 370
             +GDLY  G   Y  G LG G  +    +PR V        L+ ++CG  +T      G
Sbjct: 189 MDNGDLYACGCNDY--GQLGLGDHRNGELVPRPVEYFFRRPVLA-VACGQHYTIASLRDG 245

Query: 371 HLFTFGDGSFGALGHGDHISTSIP-----REVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
            +  FG    G LG     STS P     R    L  L   ++SCG  HTA V       
Sbjct: 246 GVVAFGKNDHGQLGLD---STSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVV------- 295

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALT 485
                  T  G ++T+G  D G+LG G K     P  V  L    I QVACG   ++ L+
Sbjct: 296 -------TEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLS 348

Query: 486 TSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTW 545
             G V+  G   +GQLG+  +   +  ++   +    V +VA G YH   L   ++  T 
Sbjct: 349 DDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTEGETP 408

Query: 546 GKGANGQLGHGD 557
               +G L +GD
Sbjct: 409 PAQGSGTL-NGD 419


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 35/325 (10%)

Query: 246  VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELVAC- 303
            + +IA G    V++ K G +F+ G    G+ G G  +  +  P  I  LSG+ + +VA  
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAAS 3227

Query: 304  -GEYHTCAVTRSGDLYTWGDGTYNS-GLLGHGSKVS-CWIPRKVSGNLDGIHLSYISCGL 360
             G  H  A++  G +Y+WG   YN  G LG G+ VS    PR +    +   +++ +   
Sbjct: 3228 NGCEHMLAISHDGAVYSWG---YNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSY 3284

Query: 361  WHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTAAV 418
             H+AVV++ G L TFG    G LG  H  H  T  P+ VETL   +  RV+CG++HT A+
Sbjct: 3285 HHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHT--PQLVETLSSQKVGRVACGLYHTVAI 3342

Query: 419  VVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG----HGDKEPRLF---PECVAPLID--E 469
            V                G ++++G  + G+LG       K P L    P    P++D   
Sbjct: 3343 V--------------DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVN 3388

Query: 470  NICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACG 529
               QV CG+  +V +   G V T G   YGQLG+   +     +       S V+  +CG
Sbjct: 3389 KAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCG 3448

Query: 530  AYHVAALTSTSKVYTWGKGANGQLG 554
             YH   L    +   +G+   GQLG
Sbjct: 3449 CYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 53/368 (14%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGR-EADVSHPQLIEILSGVNVELV--A 302
           +  +  G     ++T  G + + G    G+ GHG  +  V   + I+ L    V+ +  +
Sbjct: 383 IRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINAS 442

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNS-GLLGH---GSKVSCWIPRKVSGNLDGIHLSYISC 358
            G  H  A+T +G  Y+WG   YN  G LGH   G+K+  ++P+ +  ++    +   + 
Sbjct: 443 NGCEHLIAITDTGLAYSWG---YNDRGQLGHENVGTKL--YLPKLIE-SIKEKKMKSAAV 496

Query: 359 GLWHTAVVTSAGHLFTFGDGSFGALG--HGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
              H+A+V+ +G L+TFG    G LG  H  H ST  P+ V+ L G   + VSCG++H  
Sbjct: 497 SYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQST--PQLVKALLGHHVSMVSCGLYHMV 554

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVA 475
              ++              G++FT G  D G+LG G +K+ ++  + V P  +E +C VA
Sbjct: 555 LCTIS--------------GEVFTCGKNDHGQLGLGHNKQVKVPTQVVLP--NELVCFVA 598

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGV--------PVADGLVPTRVDGEIAESFVEEVA 527
           CG+  + A+T++G  Y+ G   YGQLG+        P+A  +         + + +   A
Sbjct: 599 CGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS--------SNTRMVHAA 650

Query: 528 CGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR---VVCGLNF 584
           CG YH   ++ + +V+ +G+   GQLG+    +   P  +    +K ++R   +  G   
Sbjct: 651 CGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYT 710

Query: 585 TAIICLHK 592
           T++I   K
Sbjct: 711 TSLIVERK 718



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 18/231 (7%)

Query: 230 TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQL 289
           T   LPK +ES     + + A    H+ LV+  GE++++G    G+LG       S PQL
Sbjct: 475 TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQL 534

Query: 290 IEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD 349
           ++ L G +V +V+CG YH    T SG+++T G   +    LGH  +V   +P +V   L 
Sbjct: 535 VKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK--VPTQVV--LP 590

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
              + +++CG +H   +TS G  ++FG   +G LG G  I  +IP  +      R    +
Sbjct: 591 NELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAA 650

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           CG +HT   ++ +DS           G++F +G  +KG+LG+      L P
Sbjct: 651 CGCYHT---LLMSDS-----------GQVFVFGRNNKGQLGNRGNTDSLLP 687



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 160/354 (45%), Gaps = 49/354 (13%)

Query: 261  KQGEIFSWGEESGGRL--GH-------GREADVSHPQLIEILSG--VNVELVACGEYHTC 309
            ++ EIFS G+ + G L  GH        R +  S+  +  I  G  V V L+  G   TC
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTC 3190

Query: 310  AVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGLWHTAVVT 367
             + +SG     G G ++  L+         +P  +   L GI ++ +  S G  H   ++
Sbjct: 3191 GLNKSGQC---GIGNFDERLI---------VPSPIPA-LSGIPITMVAASNGCEHMLAIS 3237

Query: 368  SAGHLFTFGDGSFGALGHGDHISTS-IPREVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
              G ++++G    G LG G  +S S  PR +E+LR       +   +H +AVV       
Sbjct: 3238 HDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVV------- 3290

Query: 427  SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTT 486
                  ++ G L T+G  D G+LG    + +  P+ V  L  + + +VACG   +VA+  
Sbjct: 3291 ------SNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD 3344

Query: 487  SGHVYTMGSAAYGQLG--------VPVADGLVPT-RVDGEIAESFVEEVACGAYHVAALT 537
             G VY+ G   YGQLG        VP+   + P  R     A +   +V CG YH   + 
Sbjct: 3345 DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTIL 3404

Query: 538  STSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
               KV TWG+   GQLG G K++++    V      +VKR  CG   T ++ ++
Sbjct: 3405 ECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVN 3458



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 44/339 (12%)

Query: 233  LLPKAVESTMALDVHNIAC--GARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQL 289
            ++P  + +   + +  +A   G  H + ++  G ++SWG    G+LG G     SH P++
Sbjct: 3208 IVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRV 3267

Query: 290  IEIL-SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
            IE L     +   A   +H+  V+ +GDL T+G    +SG LG         P+ V   L
Sbjct: 3268 IESLREKYFITFAAVSYHHSAVVSNNGDLLTFG--MNDSGQLGLDHTQHQHTPQLVE-TL 3324

Query: 349  DGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT--- 405
                +  ++CGL+HT  +   G +++FG   +G LG     +T +P  V+     RT   
Sbjct: 3325 SSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPML 3384

Query: 406  ------TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
                   +V CG +HT  ++               CGK+ TWG  D G+LG G KE +  
Sbjct: 3385 DAVNKAVQVYCGYYHTVTIL--------------ECGKVVTWGRNDYGQLGIGSKEHKSI 3430

Query: 460  PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-----PVADGLVPTRV 514
             + V   +   + + +CG   ++ L  +G     G    GQLGV     P AD  +P  +
Sbjct: 3431 AQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVASRSLPSADLPLPIPL 3490

Query: 515  DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL 553
                ++  V  ++ G Y    LT        GK AN QL
Sbjct: 3491 HPLSSDEVV-YISAGFYCSYILT--------GKEANDQL 3520



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 154/331 (46%), Gaps = 24/331 (7%)

Query: 263 GEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
           GE++S G+ S G LG G + +      + +    ++  V  G      +T  G + T G 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCG- 406

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI--SCGLWHTAVVTSAGHLFTFGDGSF 380
               SG  GHG+     +  +    L    + YI  S G  H   +T  G  +++G    
Sbjct: 407 -LNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 381 GALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
           G LGH +++ T +  P+ +E+++  +    +    H+A V V+              G+L
Sbjct: 466 GQLGH-ENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVS--------------GEL 510

Query: 439 FTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAY 498
           +T+G  D G+LG    + +  P+ V  L+  ++  V+CG    V  T SG V+T G   +
Sbjct: 511 YTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDH 570

Query: 499 GQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
           GQLG+     + VPT+V   +    V  VACG YH  A+TST   Y++G+   GQLG G 
Sbjct: 571 GQLGLGHNKQVKVPTQV--VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGS 628

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           K ++N P  +    + ++    CG   T ++
Sbjct: 629 KIHQNIPIALTISSNTRMVHAACGCYHTLLM 659



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 28/256 (10%)

Query: 201  GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
            G V+ WG     G LG G         R  ++L  K   +  A+  H       H+ +V+
Sbjct: 3240 GAVYSWGYN-DRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYH-------HSAVVS 3291

Query: 261  KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTW 320
              G++ ++G    G+LG         PQL+E LS   V  VACG YHT A+   GD+Y++
Sbjct: 3292 NNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSF 3351

Query: 321  GDGTYNSGLLGH--GSKVSCWI---PRKVSGNLDGIHLSY-ISCGLWHTAVVTSAGHLFT 374
            G   Y    L H   +KV   +   P   +  LD ++ +  + CG +HT  +   G + T
Sbjct: 3352 GKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVT 3411

Query: 375  FGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTS 434
            +G   +G LG G     SI + V      R  R SCG +HT  ++V              
Sbjct: 3412 WGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVN------------- 3458

Query: 435  CGKLFTWGDGDKGRLG 450
             G+   +G  +KG+LG
Sbjct: 3459 -GRPMVFGRNNKGQLG 3473



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 45/257 (17%)

Query: 368 SAGHLFTFGDGSFGALGHGDHIS----TSIP-------REV----ETLRGLRTTRV--SC 410
           S G L++ G  S+G LG GD I     TS+P       R+V    E L  L +  V  +C
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405

Query: 411 GV-------------------------WHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
           G+                          H    + A++         T  G  ++WG  D
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHL-IAITDTGLAYSWGYND 464

Query: 446 KGRLGHGDKEPRLF-PECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP 504
           +G+LGH +   +L+ P+ +  + ++ +   A  +  S  ++ SG +YT G    GQLG+ 
Sbjct: 465 RGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLD 524

Query: 505 VADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
                   ++   +    V  V+CG YH+   T + +V+T GK  +GQLG G       P
Sbjct: 525 HTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVP 584

Query: 565 TLVDFLKDKQVKRVVCG 581
           T V  L ++ V  V CG
Sbjct: 585 TQV-VLPNELVCFVACG 600


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 35/344 (10%)

Query: 237 AVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-PQLIEILSG 295
           AV++  A +V ++  G+R+++ + + G++F+WG    G LGH  E    + P  ++ L+ 
Sbjct: 32  AVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALAN 91

Query: 296 VNVELVACGEYHTCAVTRSGDLYTWGDGTYNS--------GLLGHGSKVSCWIPRKVSGN 347
             +   A G +H  AV   G  Y WG   Y             G   +    IP++ +  
Sbjct: 92  AKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASK 151

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
           L    +  ++ G  H+ V+T  GH++T+G         GD    S P  V+ L  +R   
Sbjct: 152 LS---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRL-- 202

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           ++ G +H  A++                G L+ WG+ + G+LG GD +PR  P  V  L 
Sbjct: 203 IAVGAFHNLALL--------------EDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLS 248

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV--PVADGLVPTRVDGEIAESFVEE 525
           D  +  +A G   S ALT  G VY  G   +G+LG     +  +VP +V   + E+ V +
Sbjct: 249 DLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIV-Q 307

Query: 526 VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
           ++CG  H  ALT   +++++G+G +G+LG+G K     P  V  
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPI 351



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 149/329 (45%), Gaps = 51/329 (15%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGH--GREADVSHPQLIE 291
           +P  V++     +   A G  H + V  QG  ++WG    G+ G    R+ D   P   +
Sbjct: 82  IPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 141

Query: 292 IL------SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           I       S ++V  VA G  H+  +TR G ++TWG   +  G +    ++S   P +V 
Sbjct: 142 ITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDI---KQIS--TPVRVQ 195

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
           G L+ + L  I+ G +H   +   G L+ +G+  +G LG GD    S P  V+ L  L  
Sbjct: 196 G-LEKVRL--IAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTL 252

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVA 464
             ++ G WH+ A+              T  G ++ WG G+ GRLG G DK  ++ P+ V 
Sbjct: 253 VDIAAGGWHSTAL--------------TDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQ 298

Query: 465 PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG----------------VPVADG 508
            L++ENI Q++CG   SVALT  G +++ G   +G+LG                +P A  
Sbjct: 299 LLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATN 358

Query: 509 LVPTRVDGEIAESFVEEVACGAYHVAALT 537
           L  +   G         VACG  H  A+ 
Sbjct: 359 LSGSGAGGHWCSKL---VACGGRHTLAIV 384



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 94/226 (41%), Gaps = 39/226 (17%)

Query: 370 GHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G LFT+G    G LGH     T +IP +V+ L   +  + + G WH  AV          
Sbjct: 58  GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAV---------- 107

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-----------NICQVACG 477
                  G+ + WG  + G+ G   +EP    +   PL  +           ++ QVA G
Sbjct: 108 ----DDQGRAYAWGGNEYGQCG---EEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAG 160

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVP--VADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
              SV LT  GHV+T     +GQ   P  +     P RV G      V  +A GA+H  A
Sbjct: 161 GTHSVVLTREGHVWT-----WGQPWPPGDIKQISTPVRVQGL---EKVRLIAVGAFHNLA 212

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           L     ++ WG    GQLG GD   R+ P  V  L D  +  +  G
Sbjct: 213 LLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAG 258



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 27/148 (18%)

Query: 179 ISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEH-RVGYSFSRQTDALLPKA 237
           ++L  + +   H +A  D    G V+ WG G         EH R+G+   + +  ++P+ 
Sbjct: 250 LTLVDIAAGGWHSTALTDD---GGVYGWGRG---------EHGRLGFGDDKSSK-MVPQK 296

Query: 238 VESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEI----- 292
           V+  +  ++  I+CG  H+V +T+ G +FS+G    GRLG+GR+    HP  + I     
Sbjct: 297 VQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPA 356

Query: 293 --LSGVNV------ELVACGEYHTCAVT 312
             LSG         +LVACG  HT A+ 
Sbjct: 357 TNLSGSGAGGHWCSKLVACGGRHTLAIV 384



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 438 LFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
           + +WG G+ G+LG G+ E + +   V  L  +N+C V  G   S+A+   G ++T G   
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67

Query: 498 YGQLGVPVADGL--VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
            G LG P       +P++V   +A + + + A G +H  A+    + Y WG    GQ G 
Sbjct: 68  RGTLGHPPETKTENIPSQVK-ALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126

Query: 556 GD--KDNRNSPTLVDF 569
               KD+   P   D 
Sbjct: 127 EPERKDDTGRPLRRDI 142


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 134/271 (49%), Gaps = 25/271 (9%)

Query: 231 DALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLI 290
           D  +P+ V+   + DV N+A GA H   VT  GE++  G     +LG  + +D   P  +
Sbjct: 20  DVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRV 79

Query: 291 EILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGH-GSKVSCWIPRKVSGNLD 349
             L    V+ VACG  HT AV   G +  +G   Y    LG  G++V   +PR V  +L 
Sbjct: 80  TALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVE--LPRVVK-DLR 136

Query: 350 GIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVS 409
            +H+  ++ G  HT  ++S G +F+ G+GSFGALG G      +PR +  L  L   +++
Sbjct: 137 SMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLGVVQIA 196

Query: 410 CGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRL------GHGDKEPRLFPECV 463
           CG  H+AA+              T+ G++ TWG G K RL      GHGD E    P+ V
Sbjct: 197 CGENHSAAI--------------TADGRVLTWGRG-KHRLLPAFHCGHGDFENCSTPKPV 241

Query: 464 APLIDENICQVACGHDLSVALTTSGHVYTMG 494
             L      QV+CG D +V LT  G VY  G
Sbjct: 242 QALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 21/276 (7%)

Query: 319 TWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDG 378
            W  G  + G LG GS    ++PR V G L    +  ++ G  HTA VTS G L+  G  
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKG-LKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 379 SFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKL 438
               LG         P  V  L   +  RV+CG  HT AVV                G +
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVV--------------DGGAV 106

Query: 439 FTWGDGDKGRLGHGDKEPRL-FPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAA 497
             +G  + G++G G    R+  P  V  L   +I +VA G   ++AL+++G V++ G+ +
Sbjct: 107 AAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGS 166

Query: 498 YGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQL---- 553
           +G LG    +G    R    +    V ++ACG  H AA+T+  +V TWG+G +  L    
Sbjct: 167 FGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFH 226

Query: 554 -GHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            GHGD +N ++P  V  LK    ++V CG + T ++
Sbjct: 227 CGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLL 262



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 25/290 (8%)

Query: 264 EIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDG 323
           E++ +G    G+LG G   DV  P+L++ L   +V  +A G  HT AVT  G+LY  G  
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 324 TYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGAL 383
             +   LG   +     P +V+  L+   +  ++CG  HT  V   G +  FG   +G +
Sbjct: 61  EESQ--LGVRQRSDALAPTRVTA-LEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQV 117

Query: 384 GHGD-HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           G G       +PR V+ LR +   RV+ G  HT A+              +S G +F+ G
Sbjct: 118 GLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLAL--------------SSTGGVFSCG 163

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           +G  G LG G  E    P  ++ L    + Q+ACG + S A+T  G V T G   +  L 
Sbjct: 164 NGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLP 223

Query: 503 V------PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
                     +   P  V   +      +V+CG  H   LT    VY WG
Sbjct: 224 AFHCGHGDFENCSTPKPVQ-ALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 3/151 (1%)

Query: 437 KLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           +++ +G GD G+LG G  E    P  V  L   ++  +A G   + A+T+ G +Y MGS 
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
              QLGV   +D L PTRV   + +  V+ VACG  H  A+     V  +G    GQ+G 
Sbjct: 61  EESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 556 GDKDNR-NSPTLVDFLKDKQVKRVVCGLNFT 585
           G    R   P +V  L+   + RV  G + T
Sbjct: 120 GPCGARVELPRVVKDLRSMHIVRVAAGGSHT 150


>gi|156398544|ref|XP_001638248.1| predicted protein [Nematostella vectensis]
 gi|156225367|gb|EDO46185.1| predicted protein [Nematostella vectensis]
          Length = 676

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 169/351 (48%), Gaps = 25/351 (7%)

Query: 246 VHNIACGARHAVLVTKQGEIFSW-GEESGGRLGHG--READVSHPQLIEILSGVNVELVA 302
           V  ++CG      VT  G +  W G +S G +  G   E  V  P+ +E  SG+ +  V+
Sbjct: 340 VVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITITKVS 399

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPR-KVSGNLDGIHLSYISCGLW 361
           CG+  T  +T  G L T+G GTY  G LGHG+  + ++ + K+  +L G  +  ISCG  
Sbjct: 400 CGDLFTACLTDRGILMTFGSGTY--GCLGHGT--TNYVSQAKIVEDLLGFEVEDISCGSS 455

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
           H   VT+   +F +G G  G LG G       P+ +    G+R   V CGV  + A+   
Sbjct: 456 HIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAI--- 512

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHDL 480
           T  +     GS  C KL    D + G +    +E  +  +   P  +      VA G   
Sbjct: 513 TLENKLLACGSNRCNKLAL--DNEDGPV----EEVAVLRQVSVPDFNSVGTSSVAMGTSH 566

Query: 481 SVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESF--VEEVACGAYHVAALTS 538
           ++ L  +G +Y+ GS ++GQLG  V +G+  +R   ++ ES   V  VACG     A++S
Sbjct: 567 TLVLLQNGKLYSFGSNSFGQLGY-VREGV--SRFP-QLVESLNDVSYVACGDTFSVAVSS 622

Query: 539 TSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC 589
            S+V+ WGKGA G+LG+   ++   P  +      QV  V C  N   ++C
Sbjct: 623 DSEVFVWGKGARGRLGNKADEDVREPVCLSLPAAVQVLSVSCS-NSGTLLC 672



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 25/275 (9%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           +P+ +E    + +  ++CG      +T +G + ++G  + G LGHG    VS  +++E L
Sbjct: 383 VPRFLEGQSGITITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDL 442

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  VE ++CG  H  AVT   +++ WG G  ++G LG GS+   W P+ +S   +G+  
Sbjct: 443 LGFEVEDISCGSSHIMAVTADHEVFAWGRG--DNGRLGTGSQQEYWSPKAISLP-EGMRA 499

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALG----HGDHISTSIPREVET--LRGLRTTR 407
             + CG+  +  +T    L   G      L      G     ++ R+V       + T+ 
Sbjct: 500 RSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSS 559

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V+ G  HT  ++                GKL+++G    G+LG+  +    FP+ V  L 
Sbjct: 560 VAMGTSHTLVLL--------------QNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLN 605

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           D  +  VACG   SVA+++   V+  G  A G+LG
Sbjct: 606 D--VSYVACGDTFSVAVSSDSEVFVWGKGARGRLG 638



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 419 VVATDSSSSSPSGSTSCGKLFTW-GDGDKGRLGHGDKEPRLF--PECVAPLIDENICQVA 475
           VV      +  +G T+ G++  W G    G +  G K  +    P  +       I +V+
Sbjct: 340 VVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITITKVS 399

Query: 476 CGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAA 535
           CG   +  LT  G + T GS  YG LG    + +   ++  ++    VE+++CG+ H+ A
Sbjct: 400 CGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMA 459

Query: 536 LTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIICLH 591
           +T+  +V+ WG+G NG+LG G +    SP  +   +  + + V CG++ +  I L 
Sbjct: 460 VTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLE 515



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 226 FSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVS 285
           + R+  +  P+ VES    DV  +ACG   +V V+   E+F WG+ + GRLG+  + DV 
Sbjct: 589 YVREGVSRFPQLVESLN--DVSYVACGDTFSVAVSSDSEVFVWGKGARGRLGNKADEDVR 646

Query: 286 HPQLIEILSGVNVELVAC 303
            P  + + + V V  V+C
Sbjct: 647 EPVCLSLPAAVQVLSVSC 664


>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Camponotus floridanus]
          Length = 1719

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 55/408 (13%)

Query: 187  SSSHGSAHEDFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAV--ESTMAL 244
            S S G +H      G+++ WG  +  G LG G   + Y          P A+    +M +
Sbjct: 817  SLSAGFSHVALIRNGNIYTWGSSV-QGCLGTGSSVLRYG--------APHAICFFRSMEV 867

Query: 245  DVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACG 304
            +V +++CG  H + VT  G I++WG    G+LG G+    S P+LI  L+   +     G
Sbjct: 868  EVFSVSCGHCHTLAVTNNG-IYAWGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVAG 926

Query: 305  EYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTA 364
            +YH+ A+T  G ++TWG G +  G LGHG+      P  V+  L G+ +  IS G  HT 
Sbjct: 927  QYHSVALTADGRVFTWGWGIH--GQLGHGNTDEKITPSLVTA-LLGVVVRCISAGYAHTL 983

Query: 365  VVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
             ++  G ++ FG    G LG G +  +SIP ++    G+    ++ G +H  A+      
Sbjct: 984  ALSVDGIVYAFGSNVLGQLGIGGNAKSSIPTKISLPDGI--ILINTGYFHNLAL------ 1035

Query: 425  SSSSPSGSTSCGKLFTWGDGDKG-RL-GHGDKEPRLF-----------------PECVAP 465
                    +   KL+ WG   +  RL     K  R+                  P  V  
Sbjct: 1036 --------SDTNKLYVWGASPQVLRLQAQAQKRTRILEQQDERKNKTLEESEKMPSGVIN 1087

Query: 466  LIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVAD----GLVPTRVDGEIAES 521
            L +E++ + +     +  +T+S       S +     + + D     L P+ VD  +   
Sbjct: 1088 L-NEDLLEDSVQTVETERITSSVETRKKPSGSANLRNIELIDESQAHLKPSIVDTSLIRG 1146

Query: 522  FVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDF 569
             + +++ G +H A +T    +YTWG+  +GQLG+G +     PT + +
Sbjct: 1147 QITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIPTPLSY 1194



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 436 GKLFTWGDGDKGRLGHGDKEPRL---FPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
           G ++TWG   +G LG G    R       C    ++  +  V+CGH  ++A+T +G +Y 
Sbjct: 831 GNIYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHTLAVTNNG-IYA 889

Query: 493 MGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            GS+ +GQLG+          +   +A+  + +   G YH  ALT+  +V+TWG G +GQ
Sbjct: 890 WGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGWGIHGQ 949

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCG 581
           LGHG+ D + +P+LV  L    V+ +  G
Sbjct: 950 LGHGNTDEKITPSLVTALLGVVVRCISAG 978


>gi|387018578|gb|AFJ51407.1| Serine/threonine-protein kinase Nek9-like [Crotalus adamanteus]
          Length = 963

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 154/350 (44%), Gaps = 47/350 (13%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL-SGVNVELVACGEYHTCAVTRS 314
           AV+ ++  E++ WG   GG+         S PQ ++++ +G +   V  G  H   VT  
Sbjct: 329 AVVTSRSSEVYVWG---GGK---------STPQKLDVIKNGCSARQVCAGNTHFAVVTVE 376

Query: 315 GDLYTWGD---GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
            +LYTW +   GT   G LGHG K S   P+ V   L G  +  +SCG   T  +T  G 
Sbjct: 377 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTICITDEGQ 435

Query: 372 LFTFGDGSFGALGHGDHISTSI--PREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSP 429
            F FG   +G +G      + +  PR++         +VSCG  H A +           
Sbjct: 436 AFAFGSDYYGCIGIDKAFGSEVLEPRQINFFSSNPVEQVSCGDNHVAVL----------- 484

Query: 430 SGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGH 489
              T   +++TWG G+ GRLG   +E    P+ V      NI  V CG D +  LT +G 
Sbjct: 485 ---TRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDGTFLLTQAGK 541

Query: 490 VYTMGSAAYGQLGV-PVADGLVPTRVDGEI--AESF----------VEEVACGAYHVAAL 536
           V   G   + +LG+     G++      EI  A +F          +  +A G  H AA+
Sbjct: 542 VLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIAPGKTHTAAI 601

Query: 537 TSTSKVYTWGKGANGQLGHGD-KDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
               ++ T+G    GQLG GD K +     L   L  KQV RV CG  FT
Sbjct: 602 DERGRLLTFGSNKCGQLGVGDYKKHLGINLLGGPLGGKQVIRVSCGDEFT 651



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 145/349 (41%), Gaps = 65/349 (18%)

Query: 244 LDVHNIACGAR-------HAVLVTKQGEIFSW-----GEESGGRLGHGREADVSHPQLIE 291
           LDV    C AR       H  +VT + E+++W     G +  G+LGHG +A    P+ +E
Sbjct: 351 LDVIKNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE 410

Query: 292 ILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG----HGSKVSCWIPRKVSGN 347
            L G  +  V+CG+  T  +T  G  + +G   Y  G +G     GS+V    PR+++  
Sbjct: 411 KLQGKAIRQVSCGDDFTICITDEGQAFAFGSDYY--GCIGIDKAFGSEV--LEPRQINF- 465

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTR 407
                +  +SCG  H AV+T    ++T+G G +G LG       SIP++VE  +      
Sbjct: 466 FSSNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIVS 525

Query: 408 VSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLI 467
           V CG   T  +              T  GK+   G  +  +LG          +C + +I
Sbjct: 526 VQCGSDGTFLL--------------TQAGKVLACGLNEFNKLG--------LNQCTSGII 563

Query: 468 DENICQ---------------------VACGHDLSVALTTSGHVYTMGSAAYGQLGV-PV 505
           + +  Q                     +A G   + A+   G + T GS   GQLGV   
Sbjct: 564 NHDAYQEIPYATTFTLAKKLSFYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLGVGDY 623

Query: 506 ADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
              L    + G +    V  V+CG     A T  + ++ WG G NG+L 
Sbjct: 624 KKHLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 672



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 33/285 (11%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE--ADVSHPQLIEI 292
           PK VE      +  ++CG    + +T +G+ F++G +  G +G  +   ++V  P+ I  
Sbjct: 406 PKHVEKLQGKAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINF 465

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH 352
            S   VE V+CG+ H   +TR+ ++YTWG G Y  G LG  S+    IP+KV       +
Sbjct: 466 FSSNPVEQVSCGDNHVAVLTRNREVYTWGCGEY--GRLGLDSEEDHSIPQKVEIQKTS-N 522

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREV-------------ET 399
           +  + CG   T ++T AG +   G   F  LG     S  I  +              + 
Sbjct: 523 IVSVQCGSDGTFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKK 582

Query: 400 LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLF 459
           L   +   ++ G  HTAA+                 G+L T+G    G+LG GD +  L 
Sbjct: 583 LSFYKIRTIAPGKTHTAAI--------------DERGRLLTFGSNKCGQLGVGDYKKHLG 628

Query: 460 PECVA-PLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV 503
              +  PL  + + +V+CG + ++A T   H++  G+   G+L +
Sbjct: 629 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 673



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 37/235 (15%)

Query: 364 AVVTS-AGHLFTFGDGSFGALGHGDHISTSIPREVETLR-GLRTTRVSCGVWHTAAVVVA 421
           AVVTS +  ++ +G G             S P++++ ++ G    +V  G  H A V V 
Sbjct: 329 AVVTSRSSEVYVWGGGK------------STPQKLDVIKNGCSARQVCAGNTHFAVVTVE 376

Query: 422 TDSSSSSPSGSTSCGKLFTW-----GDGDKGRLGHGDKEPRLFPECVAPLIDENICQVAC 476
            +              L+TW     G    G+LGHGDK     P+ V  L  + I QV+C
Sbjct: 377 KE--------------LYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 422

Query: 477 GHDLSVALTTSGHVYTMGSAAYGQLGVPVADG---LVPTRVDGEIAESFVEEVACGAYHV 533
           G D ++ +T  G  +  GS  YG +G+  A G   L P +++   + + VE+V+CG  HV
Sbjct: 423 GDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINF-FSSNPVEQVSCGDNHV 481

Query: 534 AALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           A LT   +VYTWG G  G+LG   +++ + P  V+  K   +  V CG + T ++
Sbjct: 482 AVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDGTFLL 536



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 116/266 (43%), Gaps = 28/266 (10%)

Query: 199 SLGDVF---IWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARH 255
           S GD F   I  EG A  F       +G   +  ++ L P+ +    +  V  ++CG  H
Sbjct: 421 SCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFFSSNPVEQVSCGDNH 480

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSG 315
             ++T+  E+++WG    GRLG   E D S PQ +EI    N+  V CG   T  +T++G
Sbjct: 481 VAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDGTFLLTQAG 540

Query: 316 DLYTWGDGTYN--------SGLLGHGS--KVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            +   G   +N        SG++ H +  ++       ++  L    +  I+ G  HTA 
Sbjct: 541 KVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIAPGKTHTAA 600

Query: 366 VTSAGHLFTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +   G L TFG    G LG GD+     I      L G +  RVSCG   T A   ATD 
Sbjct: 601 IDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGGPLGGKQVIRVSCGDEFTIA---ATDD 657

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLG 450
           +            +F WG+G  GRL 
Sbjct: 658 N-----------HIFAWGNGGNGRLA 672



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 35/239 (14%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTK 261
           +V+ WG G   G LG            + D  +P+ VE     ++ ++ CG+    L+T+
Sbjct: 489 EVYTWGCG-EYGRLG---------LDSEEDHSIPQKVEIQKTSNIVSVQCGSDGTFLLTQ 538

Query: 262 QGEIFSWGEESGGRLGHGR--EADVSHPQLIEI-----------LSGVNVELVACGEYHT 308
            G++ + G     +LG  +     ++H    EI           LS   +  +A G+ HT
Sbjct: 539 AGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIAPGKTHT 598

Query: 309 CAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS 368
            A+   G L T+G      G LG G          + G L G  +  +SCG   T   T 
Sbjct: 599 AAIDERGRLLTFGSN--KCGQLGVGDYKKHLGINLLGGPLGGKQVIRVSCGDEFTIAATD 656

Query: 369 AGHLFTFGDGSFGALG-------HGDHISTSIPREVETLRGLR-TTRVSCGVWHTAAVV 419
             H+F +G+G  G L        H   I TS PR +     L     +SC  WHT  +V
Sbjct: 657 DNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPI--FGSLHYVPDLSCHGWHTIIIV 713


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 161/351 (45%), Gaps = 59/351 (16%)

Query: 281 EADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGS----KV 336
           E DV  P        +++ +V+ G  H+ +++R G+LYTW  G  +SG LGHG     +V
Sbjct: 206 ERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTW--GLASSGELGHGGWTPIEV 263

Query: 337 SCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPRE 396
           SC  PR ++ +L    +  +SCG  HT  ++  G L++ G G  G LGHG      +   
Sbjct: 264 SC--PRMIT-SLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLML 320

Query: 397 VETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEP 456
           V+T+R  R   V+ G  H+  V +A D            GK+FTWGD  KG+LGH     
Sbjct: 321 VDTIRHERVVSVAAGRAHS--VALAAD------------GKIFTWGDASKGQLGHAQLAA 366

Query: 457 RL-----------FPECVAPL------IDENICQVACGHDLSVALTTSGHVYTMGSAAYG 499
            +           FP+ +  L          +  +A G D S+A+T +G +   GS  +G
Sbjct: 367 VMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHG 426

Query: 500 QLGVPVADGL---VPTRVD-------GEIAESFVEEVACGAYHVAALTSTS---KVYTWG 546
           Q  +   D L   +PT V        G++  +   +V CGA H  AL       +V + G
Sbjct: 427 QARLGTGDTLDRMIPTEVPLALESEGGQLVRAM--QVHCGAQHTLALVQVQGHHQVRSVG 484

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAIIC----LHKW 593
             + G+LG GD+  R+    +  LK K +  V  G    A IC    L+ W
Sbjct: 485 GNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVW 535



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 170/356 (47%), Gaps = 57/356 (16%)

Query: 245 DVH--NIACGARHAVLVTKQGEIFSWGEESGGRLGHG--READVSHPQLIEILSGVNVEL 300
           D+H   ++ G+ H+  ++++GE+++WG  S G LGHG     +VS P++I  L    +  
Sbjct: 220 DIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTRIVS 279

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           V+CG  HT A++ +G L++ G G +  G LGHG      +   V   +    +  ++ G 
Sbjct: 280 VSCGANHTLAISETGQLWSCGRGRH--GQLGHGHFHDEGLLMLVD-TIRHERVVSVAAGR 336

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHGD-----------HISTSIPREVETLRGLR----- 404
            H+  + + G +FT+GD S G LGH              +S   P+ +++L   R     
Sbjct: 337 AHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPA 396

Query: 405 -TTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKG--RLGHGDKEPRLFPE 461
             T ++ G  H+ AV VA              G L  +G    G  RLG GD   R+ P 
Sbjct: 397 RVTAIAAGGDHSMAVTVA--------------GALLAFGSNKHGQARLGTGDTLDRMIPT 442

Query: 462 CVAPLIDEN-------ICQVACGHDLSVALT-TSGH--VYTMGSAAYGQLGVPVADGLVP 511
            V PL  E+         QV CG   ++AL    GH  V ++G  +YG+LG+   D L  
Sbjct: 443 EV-PLALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGL--GDRLER 499

Query: 512 TR---VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
            R   +     +S V  V+ G +H AA+    ++Y WG+G  GQLG GD  NR +P
Sbjct: 500 HRFHPIPALKGKSIVC-VSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAP 554



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)

Query: 158 PLTNAFPDNSNDRSSAAETFRISLSSVVSSSSHGSAHEDFDSLGDVFIWGEGIANGFLGG 217
           PL    PD+            I L+ V + SSH ++       G+++ WG   ++G LG 
Sbjct: 212 PLYQGAPDD------------IHLAVVSAGSSHSAS---ISRRGELYTWGLA-SSGELGH 255

Query: 218 GEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLG 277
           G    G++     +   P+ + S     + +++CGA H + +++ G+++S G    G+LG
Sbjct: 256 G----GWT---PIEVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLG 308

Query: 278 HGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHG---- 333
           HG   D     L++ +    V  VA G  H+ A+   G ++TWGD +   G LGH     
Sbjct: 309 HGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALAADGKIFTWGDAS--KGQLGHAQLAA 366

Query: 334 -------SKVSCWIPRKVSGNLDGIHL------SYISCGLWHTAVVTSAGHLFTFGDGSF 380
                    +S   P+ +  +L+   L      + I+ G  H+  VT AG L  FG    
Sbjct: 367 VMQGPNPQPLSIPFPQAIQ-SLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKH 425

Query: 381 GA--LGHGDHISTSIPREV------ETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGS 432
           G   LG GD +   IP EV      E  + +R  +V CG  HT A+V           G 
Sbjct: 426 GQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGG 485

Query: 433 TSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYT 492
            S G+           LG GD+  R     +  L  ++I  V+ G   + A+   G +Y 
Sbjct: 486 NSYGE-----------LGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYV 534

Query: 493 MGSAAYGQLGV 503
            G    GQLG+
Sbjct: 535 WGRGDCGQLGL 545



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 107/241 (44%), Gaps = 39/241 (16%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH-----------PQLIEILS 294
           V ++A G  H+V +   G+IF+WG+ S G+LGH + A V             PQ I+ L 
Sbjct: 329 VVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLE 388

Query: 295 GVN------VELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNL 348
                    V  +A G  H+ AVT +G L  +G   +    LG G  +   IP +V   L
Sbjct: 389 PARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLAL 448

Query: 349 DG-----IHLSYISCGLWHT-AVVTSAGH--LFTFGDGSFGALGHGDHISTSIPREVETL 400
           +      +    + CG  HT A+V   GH  + + G  S+G LG GD +       +  L
Sbjct: 449 ESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPAL 508

Query: 401 RGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP 460
           +G     VS G WH AA+                 G+L+ WG GD G+LG GD   R  P
Sbjct: 509 KGKSIVCVSVGDWHNAAIC--------------QDGRLYVWGRGDCGQLGLGDDRNRWAP 554

Query: 461 E 461
           +
Sbjct: 555 K 555



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 28/194 (14%)

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVA- 464
           T ++ G +HT  ++   + ++   +       ++  G G  G+LG    + +  P+ V  
Sbjct: 152 TAIALGTYHTVGLLCQPEQAAPEYA-------MYAMGRGFHGQLGLEQFDNQEQPQRVGA 204

Query: 465 -------PLI-----DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPT 512
                  PL      D ++  V+ G   S +++  G +YT G A+ G+LG     G  P 
Sbjct: 205 VERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELG---HGGWTPI 261

Query: 513 -----RVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLV 567
                R+   +  + +  V+CGA H  A++ T ++++ G+G +GQLGHG   +     LV
Sbjct: 262 EVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLV 321

Query: 568 DFLKDKQVKRVVCG 581
           D ++ ++V  V  G
Sbjct: 322 DTIRHERVVSVAAG 335


>gi|299471641|emb|CBN76863.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 582

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 187/412 (45%), Gaps = 61/412 (14%)

Query: 214 FLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACG--ARHAVLVTKQGEIFSWGEE 271
           F+GG +         + D L PK + S     + ++A G  A H+V +  QG +++WG  
Sbjct: 121 FIGGTDWTALGRRPTEGDILCPKRLLS-FPKKIKSVASGPTACHSVCIDVQGGVYTWGRN 179

Query: 272 SGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLG 331
             G LGHG  A  +HP L+  LSG  ++  +CG+ HT  +  +G LY  G G      LG
Sbjct: 180 EFGGLGHGDTAPRAHPTLVAALSGTRMKQASCGKTHTGILAENGTLYMMGGGKLGQLGLG 239

Query: 332 HGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG---DGSFGALGHGDH 388
              + SC  P+ V   + G  +  ++CG   TA++ + G L TFG   DG  G    G+ 
Sbjct: 240 RAVE-SCTEPKAV--EVPGGTVEKVACGAEFTAIIDNRGRLLTFGSPQDGQLGGGTTGEF 296

Query: 389 ISTS-------------IP---------REVETLRGLRTTRVSCGVWHTAAVVVATDSSS 426
           I  +             +P         + +E  RG+    ++CG  H  AV        
Sbjct: 297 IEKAGKISYDLVLAPAVVPTFFSKDARTKAIEEFRGVELADIACGKSHGVAV-------E 349

Query: 427 SSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECV---APLIDENICQVACGHDLSVA 483
             P       ++FTWG G  GRLGH  ++  L P  V   A +    + +VA G   S+A
Sbjct: 350 KGPR-----ARVFTWGFGGYGRLGHACQDQELRPRMVDVLARMTHLKVTKVAAGAGCSLA 404

Query: 484 LTTSGHVYTMGSAAYGQL-GVPVADGLVPTRVDGEIAESFVEEVAC--GAYHVAALTSTS 540
           +T +GH++      +G+L   P  +  +  ++  +++      VA   GA  VAA TST 
Sbjct: 405 ITENGHLFY-----WGKLPNAPRGEATMYPKIVEDLSNWQTRSVAGSNGALLVAAETST- 458

Query: 541 KVYTWGKGANGQLGHGDK----DNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
              +WG    G+LG+G++         P LV+ L+   V +V  GL  + ++
Sbjct: 459 --ISWGTSVAGELGYGEEIGTPRTSTKPKLVNALEGLTVMQVAMGLGHSLLL 508


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 147/299 (49%), Gaps = 21/299 (7%)

Query: 253 ARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE-YHTCAV 311
           A  A+ VT   E+F+ G    G LG G       P+ I++L G  +  ++ G   H    
Sbjct: 31  ANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIA 90

Query: 312 TRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGH 371
           T  G++++WG   Y+   LG+G+      P  VS NL G  +  ++CG  HT  +T+ G 
Sbjct: 91  TADGEVFSWGHNGYSQ--LGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGE 148

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSSPS 430
           +F +G  + G +G G   +   PR V + L+      ++CG   + AV+   DS      
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVL---DS------ 199

Query: 431 GSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHV 490
                G+++ WG    G+LG G+   +  P  +A L   N+ QVACG+  ++ALT  G V
Sbjct: 200 -----GEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFV 254

Query: 491 YTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHV-AALTSTSKVYTWGK 547
           Y+ G+ +YGQLG     +  VPT ++ E  E   E  AC   H  AA T + +V  WG+
Sbjct: 255 YSWGANSYGQLGTGNKCNQAVPTLINTE-KERMSEVAACHTSHTSAAKTQSGQVLMWGQ 312



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 127/265 (47%), Gaps = 26/265 (9%)

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW-HTAVVTSAGHLFTFGDGSFG 381
           GT  SG LG G   S   PR++   L G  +  +S G   H A+ T+ G +F++G   + 
Sbjct: 47  GTNCSGCLGLGDLQSTIEPRRID-VLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYS 105

Query: 382 ALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFT 440
            LG+G       P  V T L G R   V+CG  HT A+              T+ G++F 
Sbjct: 106 QLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIAL--------------TTDGEVFA 151

Query: 441 WGDGDKGRLGHG----DKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSA 496
           WG  + G++G G       PR    C   L ++ +  +ACG   S+A+  SG +Y  G  
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSC---LQNKVVVNIACGQLCSMAVLDSGEIYGWGYN 208

Query: 497 AYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGH 555
             GQLG+    +   P R+   +    V +VACG  H  ALT    VY+WG  + GQLG 
Sbjct: 209 CNGQLGLGNNGNQQTPCRI-AALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGT 267

Query: 556 GDKDNRNSPTLVDFLKDKQVKRVVC 580
           G+K N+  PTL++  K++  +   C
Sbjct: 268 GNKCNQAVPTLINTEKERMSEVAAC 292



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 32/246 (13%)

Query: 201 GDVFIWGEGIANGF--LGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVL 258
           G+VF WG    NG+  LG G    G + +  +  LL K V          +ACG+ H + 
Sbjct: 94  GEVFSWGH---NGYSQLGNGTSTHGLTPALVSTNLLGKRVIE--------VACGSHHTIA 142

Query: 259 VTKQGEIFSWGEESGGRLGHGREADVSHPQLI-EILSGVNVELVACGEYHTCAVTRSGDL 317
           +T  GE+F+WG  + G++G G  A+   P+ +   L    V  +ACG+  + AV  SG++
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEI 202

Query: 318 YTWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
           Y WG   YN +G LG G+  +   P +++  L G+++  ++CG  HT  +T  G ++++G
Sbjct: 203 YGWG---YNCNGQLGLGNNGNQQTPCRIAA-LQGVNVIQVACGYAHTIALTDEGFVYSWG 258

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCG 436
             S+G LG G+  + ++P  + T +   +   +C   HT+A               T  G
Sbjct: 259 ANSYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTSA-------------AKTQSG 305

Query: 437 KLFTWG 442
           ++  WG
Sbjct: 306 QVLMWG 311



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 97/197 (49%), Gaps = 19/197 (9%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVH-NIACGARHAVLV 259
           G+VF WG      +   G+   G + ++ T    P+ V S +   V  NIACG   ++ V
Sbjct: 147 GEVFAWG------YNNSGQVGSGSTANQPT----PRRVSSCLQNKVVVNIACGQLCSMAV 196

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              GEI+ WG    G+LG G   +   P  I  L GVNV  VACG  HT A+T  G +Y+
Sbjct: 197 LDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYS 256

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYI-SCGLWHT-AVVTSAGHLFTFGD 377
           WG  +Y  G LG G+K +  +P  +  N +   +S + +C   HT A  T +G +  +G 
Sbjct: 257 WGANSY--GQLGTGNKCNQAVPTLI--NTEKERMSEVAACHTSHTSAAKTQSGQVLMWGQ 312

Query: 378 --GSFGALGHGDHISTS 392
             G   A  H  H S++
Sbjct: 313 CRGQAVASPHLTHFSST 329


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 36/318 (11%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREA-----DVSHPQLIEILSGVNVEL 300
           V   A G +  +++ K G + S+G    G LGHG +A     D   P+ I+ L    V  
Sbjct: 40  VQVAAGGGQLDLMLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVIC 99

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS-GNLDGIHLSYISCG 359
           V+ GE H+  VT  GD+YTWG+G    G LG G +    +P +V+ G L+   +S +SCG
Sbjct: 100 VSAGELHSGCVTADGDVYTWGEGF--CGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCG 157

Query: 360 LWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSI--------PREVETLRGLRTTRVSCG 411
             HT VVT  G +F++G G +G L   D ++ ++        P+ V+ L   R   VS G
Sbjct: 158 CRHTLVVTEEGEVFSWGLGRYGVL---DALNLTLDDPSDQCFPKLVDALGAFRAVGVSAG 214

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN- 470
             H+  +                 G L+T+G G  G LGHGD   + FP  V    + N 
Sbjct: 215 HRHSMVL--------------DEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNV 260

Query: 471 -ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVAC 528
            I Q++ G D+S+A++T+G VY  G A  G++G+   + + +P +VD   A     +V C
Sbjct: 261 RIHQMSAGVDMSMAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVEC 320

Query: 529 GAYHVAALTSTSKVYTWG 546
           G  H   +     VY  G
Sbjct: 321 GYVHSLIIGLDGSVYQCG 338



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 158/346 (45%), Gaps = 39/346 (11%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQLI--EILSGVN-VELVACGEYHTCAVTRSGDLYTWG 321
           I SWG    G+ GHG   DVS P+L+  +I  GV  V++ A G      + +SG + ++G
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFG 63

Query: 322 DGTYNSGLLGHGSKVS-----CWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFG 376
              Y  G LGHG         C  PR +   L    +  +S G  H+  VT+ G ++T+G
Sbjct: 64  TAQY--GALGHGYDAGKQLSDCLRPRYIDA-LKNEKVICVSAGELHSGCVTADGDVYTWG 120

Query: 377 DGSFGALGHGDHISTSIPREVETLRGLR---TTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +G  G LG GD     +P +V TL GL     + +SCG  HT  V              T
Sbjct: 121 EGFCGQLGLGDRRPHLLPEQV-TLGGLEDECVSNMSCGCRHTLVV--------------T 165

Query: 434 SCGKLFTWGDGDKG-----RLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
             G++F+WG G  G      L   D   + FP+ V  L       V+ GH  S+ L   G
Sbjct: 166 EEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHG 225

Query: 489 HVYTMGSAAYGQLGVPVADGL-VPTRV-DGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
            +YT GS A G LG     G   P +V   E     + +++ G     A+++T  VY WG
Sbjct: 226 GLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWG 285

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVK--RVVCGLNFTAIICL 590
           K   G++G G+ ++   P  VD + D   K   V CG   + II L
Sbjct: 286 KAKEGRIGLGNNNDICLPRKVD-VGDANFKGVDVECGYVHSLIIGL 330



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 223 GYSFSRQ-TDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGRE 281
           GY   +Q +D L P+ +++     V  ++ G  H+  VT  G++++WGE   G+LG G  
Sbjct: 73  GYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGDR 132

Query: 282 ADVSHPQLIEILSGVNVELVA---CGEYHTCAVTRSGDLYTWGDGTYNS----GLLGHGS 334
                P+ +  L G+  E V+   CG  HT  VT  G++++WG G Y       L     
Sbjct: 133 RPHLLPEQV-TLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDP 191

Query: 335 KVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIP 394
              C+ P+ V   L       +S G  H+ V+   G L+TFG G+ GALGHGD +    P
Sbjct: 192 SDQCF-PKLVDA-LGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFP 249

Query: 395 REVETLR--GLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG 452
            +V       +R  ++S GV  + AV              ++ G ++ WG   +GR+G G
Sbjct: 250 VKVMQFEENNVRIHQMSAGVDMSMAV--------------STTGDVYAWGKAKEGRIGLG 295

Query: 453 DKEPRLFPECVAPLIDENI--CQVACGHDLSVALTTSGHVYTMGSAA 497
           +      P  V  + D N     V CG+  S+ +   G VY  G   
Sbjct: 296 NNNDICLPRKV-DVGDANFKGVDVECGYVHSLIIGLDGSVYQCGGVG 341



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 30/268 (11%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALD--VHNIACGARHAVL 258
           GDV+ WGEG   G LG G+ R           LLP+ V      D  V N++CG RH ++
Sbjct: 114 GDVYTWGEGFC-GQLGLGDRR---------PHLLPEQVTLGGLEDECVSNMSCGCRHTLV 163

Query: 259 VTKQGEIFSWGEESGG-----RLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTR 313
           VT++GE+FSWG    G      L     +D   P+L++ L       V+ G  H+  +  
Sbjct: 164 VTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDE 223

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKV-SGNLDGIHLSYISCGLWHTAVVTSAGHL 372
            G LYT+G G   SG LGHG  V    P KV     + + +  +S G+  +  V++ G +
Sbjct: 224 HGGLYTFGSGA--SGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDV 281

Query: 373 FTFGDGSFGALGHGDHISTSIPREVETLRG-LRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           + +G    G +G G++    +PR+V+      +   V CG  H+  +++  D S     G
Sbjct: 282 YAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHS--LIIGLDGSVYQCGG 339

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLF 459
               GK       D G+   GD  P L 
Sbjct: 340 VGVDGK-------DDGQNTGGDGFPVLL 360


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 31/344 (9%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +I+CG  H  L+   G +F++G+ + G+LG G    V+ P  I+ L    V  VACG 
Sbjct: 27  VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            HT   T SG +Y++G        LG   +  C  P  + G L+   +  +S G++H+ V
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDEKVC-SPTVIKG-LESHAVKMLSAGMYHSCV 144

Query: 366 VTSAGHLFTFGDGSFGALGHGDHIST-SIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           +T  G ++ +G G  G LG G+ ++    P  ++         ++CG +HTA V      
Sbjct: 145 LTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD--EVVCIACGYYHTALV------ 196

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                   T+ GKL T+G+ D+G+LG G D      P+ V   I+ ++  VACG   +VA
Sbjct: 197 --------TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDG-IEGHVVSVACGGAHTVA 247

Query: 484 LTTSGHVYTMGSAAYGQLG----VPVADGLVPTRVDGEIAESFVEEVACGAYHVAALTST 539
           + T   VYT G+ + GQLG    +  AD   P ++  +   + V   +CG  H A +T  
Sbjct: 248 I-TGWLVYTFGNGSSGQLGHGNMLLQAD--TPHKIVWQ-KPTKVRSASCGENHTALVTDR 303

Query: 540 SKVYTWGKGANGQLGHGDKD--NRNSPTLVDFLKDKQVKRVVCG 581
            +++T G G +G+L  G+++  N+  P          V++V CG
Sbjct: 304 GQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCG 347



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 29/308 (9%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD-VSHPQLIEIL 293
           P  ++S  A  VH +ACG  H +L T+ G+I+S+G  +  +LG G + + V  P +I+ L
Sbjct: 68  PTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGL 127

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCW-IPRKVSGNLDGIH 352
               V++++ G YH+C +T  G +Y WG G    G LG G  V+    P ++  ++D   
Sbjct: 128 ESHAVKMLSAGMYHSCVLTDKGSVYLWGGG--EEGQLGFGEDVTKHETPERL--DVDD-E 182

Query: 353 LSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCG 411
           +  I+CG +HTA+VT+ G L TFG+   G LG G D     +P+ V+ + G     V+CG
Sbjct: 183 VVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACG 241

Query: 412 VWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRL-FPECVAPLIDEN 470
             HT A+                   ++T+G+G  G+LGHG+   +   P  +       
Sbjct: 242 GAHTVAITGWL---------------VYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTK 286

Query: 471 ICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVP---VADGLVPTRVDGEIAESFVEEVA 527
           +   +CG + +  +T  G ++T G   +G+L +     A+   P       ++  VE+V+
Sbjct: 287 VRSASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCH-SVRFSKFVVEQVS 345

Query: 528 CGAYHVAA 535
           CG  H  A
Sbjct: 346 CGGCHTLA 353



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 145/293 (49%), Gaps = 27/293 (9%)

Query: 301 VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGL 360
           ++CG+ HT  +   G ++T+GD  +    LGH   V+   P ++  +L    +  ++CG 
Sbjct: 30  ISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVT--KPTRIK-SLKAEKVHQVACGR 86

Query: 361 WHTAVVTSAGHLFTFGDGSFGALGHG-DHISTSIPREVETLRGLRTTRVSCGVWHTAAVV 419
            HT + T +G +++FG  +   LG G D      P  ++ L       +S G++H+    
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSC--- 143

Query: 420 VATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHG-DKEPRLFPECVAPLIDENICQVACGH 478
           V TD            G ++ WG G++G+LG G D      PE +   +D+ +  +ACG+
Sbjct: 144 VLTDK-----------GSVYLWGGGEEGQLGFGEDVTKHETPERLD--VDDEVVCIACGY 190

Query: 479 DLSVALTTSGHVYTMGSAAYGQLG--VPVADGLVPTRVDGEIAESFVEEVACGAYHVAAL 536
             +  +T  G + T G    G+LG      D  +P  VDG   E  V  VACG  H  A+
Sbjct: 191 YHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDG--IEGHVVSVACGGAHTVAI 248

Query: 537 TSTSKVYTWGKGANGQLGHGDKD-NRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           T    VYT+G G++GQLGHG+     ++P  + + K  +V+   CG N TA++
Sbjct: 249 TGW-LVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGENHTALV 300



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 468 DENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV----PVADGLVPTRVDGEIAESFV 523
           ++ +  ++CG + +  L   G V+T G  A+GQLG+    PV     PTR+    AE  V
Sbjct: 24  EDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTK---PTRIKSLKAEK-V 79

Query: 524 EEVACGAYHVAALTSTSKVYTWGKGANGQLGHG-DKDNRNSPTLVDFLKDKQVKRVVCGL 582
            +VACG  H    T + K+Y++G   + QLG G D +   SPT++  L+   VK +  G+
Sbjct: 80  HQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGM 139

Query: 583 NFTAII 588
             + ++
Sbjct: 140 YHSCVL 145



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 518 IAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKR 577
           I E  V  ++CG  H + L    +V+T+G  A GQLG G       PT +  LK ++V +
Sbjct: 22  IREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQ 81

Query: 578 VVCGLNFTAI 587
           V CG + T +
Sbjct: 82  VACGRSHTLL 91


>gi|440792615|gb|ELR13824.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 1825

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 19/188 (10%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V +IA G  ++  VT  G ++++G    G LGH        P+ +E L G  V  VACG 
Sbjct: 115 VASIAVGQMYSAAVTTDGGLWTFGI---GPLGHAISVK-QDPEQVEALRGKKVVAVACGS 170

Query: 306 YHTCAVTRSGDLYTWGDGTYNS--------------GLLGHGSKVSCWIPRKVSGNLDGI 351
           +H   VT SG+LYTWG   ++                  GHG + +   PR+V+  L+G 
Sbjct: 171 FHMGCVTESGELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVEPRRVTA-LEGK 229

Query: 352 HLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCG 411
            +  +SCG +HTAV T AG ++TFG GS GALGHGD +   IPR V++L       VSCG
Sbjct: 230 RVVEVSCGAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDSLVNRCVQHVSCG 289

Query: 412 VWHTAAVV 419
            +HT  VV
Sbjct: 290 WYHTTVVV 297



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 141/340 (41%), Gaps = 79/340 (23%)

Query: 284 VSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSG-LLGHGSKVSCWIPR 342
           + H Q+        V+ V+ G Y T A + +G+ + W +GT  S  L    +K  C    
Sbjct: 1   MPHSQVETQFGKRQVKQVSAGLYQTWATSANGECHLWKEGTSMSADLRALATKEKC---- 56

Query: 343 KVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET--- 399
                        +SCG  ++A+      LF  G G     GH     TS+P  +ET   
Sbjct: 57  -----------VQVSCGQTYSAL------LFESGVGKVYNSGH----LTSLPPVLETEDE 95

Query: 400 --------------LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGD 445
                           G     ++ G  ++AAV              T+ G L+T+G G 
Sbjct: 96  SSVVIKQSDWRLLDFGGKSVASIAVGQMYSAAV--------------TTDGGLWTFGIGP 141

Query: 446 KGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGVPV 505
              LGH     +  PE V  L  + +  VACG      +T SG +YT GS+ + QLG   
Sbjct: 142 ---LGHA-ISVKQDPEQVEALRGKKVVAVACGSFHMGCVTESGELYTWGSSVWHQLGGQA 197

Query: 506 ADGLV-----------------PTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKG 548
           A   +                 P RV     +  VE V+CGAYH A  T   +VYT+G G
Sbjct: 198 AHITIIACYSTAGHGERKNVVEPRRVTALEGKRVVE-VSCGAYHTAVRTDAGRVYTFGAG 256

Query: 549 ANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
           + G LGHGD  ++  P LVD L ++ V+ V CG   T ++
Sbjct: 257 SLGALGHGDLVDQEIPRLVDSLVNRCVQHVSCGWYHTTVV 296



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 22/180 (12%)

Query: 222 VGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWG----EESGGR-- 275
           +G++ S + D   P+ VE+     V  +ACG+ H   VT+ GE+++WG     + GG+  
Sbjct: 142 LGHAISVKQD---PEQVEALRGKKVVAVACGSFHMGCVTESGELYTWGSSVWHQLGGQAA 198

Query: 276 ----------LGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGTY 325
                      GHG   +V  P+ +  L G  V  V+CG YHT   T +G +YT+G G+ 
Sbjct: 199 HITIIACYSTAGHGERKNVVEPRRVTALEGKRVVEVSCGAYHTAVRTDAGRVYTFGAGSL 258

Query: 326 NSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGH 385
             G LGHG  V   IPR V   ++   + ++SCG +HT VV       +      G L H
Sbjct: 259 --GALGHGDLVDQEIPRLVDSLVNRC-VQHVSCGWYHTTVVVGMDPNISLLRDEMGKLLH 315



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 40/280 (14%)

Query: 301 VACGEYHTCAVTRSG--DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLD--GIHLSYI 356
           V+CG+ ++  +  SG   +Y  G  T    +L    + S  I +     LD  G  ++ I
Sbjct: 59  VSCGQTYSALLFESGVGKVYNSGHLTSLPPVLETEDESSVVIKQSDWRLLDFGGKSVASI 118

Query: 357 SCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTA 416
           + G  ++A VT+ G L+TFG    G LGH   +    P +VE LRG +   V+CG +H  
Sbjct: 119 AVGQMYSAAVTTDGGLWTFG---IGPLGHAISVKQD-PEQVEALRGKKVVAVACGSFHMG 174

Query: 417 AVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLG----------------HGDKEPRLFP 460
            V              T  G+L+TWG     +LG                HG+++  + P
Sbjct: 175 CV--------------TESGELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVEP 220

Query: 461 ECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIA 519
             V  L  + + +V+CG   +   T +G VYT G+ + G LG   + D  +P  VD  + 
Sbjct: 221 RRVTALEGKRVVEVSCGAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDS-LV 279

Query: 520 ESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKD 559
              V+ V+CG YH   +       +  +   G+L H   D
Sbjct: 280 NRCVQHVSCGWYHTTVVVGMDPNISLLRDEMGKLLHEQSD 319



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)

Query: 201 GDVFIWGEGIANGFLGGGEHR---VGYSFS---RQTDALLPKAVESTMALDVHNIACGAR 254
           G+++ WG  + +   G   H      YS +    + + + P+ V +     V  ++CGA 
Sbjct: 180 GELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVEPRRVTALEGKRVVEVSCGAY 239

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV 311
           H  + T  G ++++G  S G LGHG   D   P+L++ L    V+ V+CG YHT  V
Sbjct: 240 HTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDSLVNRCVQHVSCGWYHTTVV 296


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 25/298 (8%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE-YHTCAVTRS 314
            + VT+  E+F+ G    G LG G   +   P+ ++ L G  +  ++ G   H    T  
Sbjct: 34  VLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAE 93

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFT 374
           G++YTWG   Y+   LG+G+  +  +P ++S NL    ++ ++CG  H+ ++TS G ++T
Sbjct: 94  GEVYTWGHNAYSQ--LGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYT 151

Query: 375 FGDGSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
           +G  + G +G G   + +IPR V + L+      ++CG   + AVV              
Sbjct: 152 WGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVV-------------- 197

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTM 493
             G+++ WG    G+LG G+   +  P  +A L    + +VACG+  ++ LT  G +Y  
Sbjct: 198 ENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAW 257

Query: 494 GSAAYGQLGVPVADGL---VPTRVDGEIAESFVEEVACGAYHV-AALTSTSKVYTWGK 547
           G+ +YGQLG          VP  VD    +  +E  AC + H  AA T  S+VY WG+
Sbjct: 258 GANSYGQLGTGNRSNQSYPVPITVD---KDRVIEIAACHSAHTSAAKTQGSQVYMWGQ 312



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 22/254 (8%)

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADVSHP-QLIEILSGVNVELVACGEYHTCAVTR 313
           H V+ T +GE+++WG  +  +LG+G   +   P Q+   L    V  VACG +H+  +T 
Sbjct: 86  HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTS 145

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            G++YTWG    NSG +G GS  +  IPR+V+  L       I+CG   +  V   G ++
Sbjct: 146 DGEVYTWGYN--NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVY 203

Query: 374 TFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGST 433
            +G    G LG G+  +   P  +  L+G+R  RV+CG  HT   +V TD          
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHT---LVLTDE--------- 251

Query: 434 SCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDEN-ICQVACGHD--LSVALTTSGHV 490
             G+++ WG    G+LG G++  + +P  V   +D++ + ++A  H    S A T    V
Sbjct: 252 --GQMYAWGANSYGQLGTGNRSNQSYP--VPITVDKDRVIEIAACHSAHTSAAKTQGSQV 307

Query: 491 YTMGSAAYGQLGVP 504
           Y  G      + +P
Sbjct: 308 YMWGQCRGQSITLP 321



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           VT    +F  G    G LG GD  ++  PR ++TL G + T +S G      VVVAT   
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYG--SGPHVVVATAE- 93

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVAL 484
                     G+++TWG     +LG+G     L P +    L+++ + +VACG   S+ L
Sbjct: 94  ----------GEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMIL 143

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T+ G VYT G    GQ+G    A+  +P RV   +       +ACG     A+    +VY
Sbjct: 144 TSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVY 203

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            WG   NGQLG G+  N+ +P  +  L+  +V+RV CG   T ++
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 22/274 (8%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW-HTAVVTSA 369
           VT + +++  G  T  SG LG G   +   PR++   L G  ++ +S G   H  V T+ 
Sbjct: 37  VTENNEVFALG--TNCSGCLGVGDTQNSVEPRRLD-TLCGKKITCLSYGSGPHVVVATAE 93

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G ++T+G  ++  LG+G   ++ +P ++ T L   + T V+CG  H+  +          
Sbjct: 94  GEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMIL---------- 143

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENIC-QVACGHDLSVALTTS 487
               TS G+++TWG  + G++G G    +  P  V   +   I   +ACG   S+A+  +
Sbjct: 144 ----TSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVEN 199

Query: 488 GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G VY  G    GQLG+    +   P R+   +    V+ VACG  H   LT   ++Y WG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQMYAWG 258

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             + GQLG G++ N++ P  +   KD+ ++   C
Sbjct: 259 ANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAAC 292



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 17/220 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAVLV 259
           G+V+ WG   A   LG G            ++LLP  + + +    V  +ACG+ H++++
Sbjct: 94  GEVYTWGHN-AYSQLGNGT---------TNNSLLPCQISTNLVNKKVTEVACGSHHSMIL 143

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVEL-VACGEYHTCAVTRSGDLY 318
           T  GE+++WG  + G++G G  A+ + P+ +       + + +ACG+  + AV  +G++Y
Sbjct: 144 TSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVY 203

Query: 319 TWGDGTYN-SGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGD 377
            WG   YN +G LG G+  +   P +++  L GI +  ++CG  HT V+T  G ++ +G 
Sbjct: 204 VWG---YNGNGQLGLGNSGNQPTPCRIAA-LQGIRVQRVACGYAHTLVLTDEGQMYAWGA 259

Query: 378 GSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAA 417
            S+G LG G+  + S P  +   +       +C   HT+A
Sbjct: 260 NSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSA 299



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)

Query: 185 VSSSSHGSAHED-FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V+  + GS H     S G+V+ WG    +G +G G            +  +P+ V S + 
Sbjct: 130 VTEVACGSHHSMILTSDGEVYTWGYN-NSGQVGSGS---------TANQAIPRRVTSCLQ 179

Query: 244 LDVH-NIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVA 302
             +  NIACG   ++ V + GE++ WG    G+LG G   +   P  I  L G+ V+ VA
Sbjct: 180 NKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVA 239

Query: 303 CGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWH 362
           CG  HT  +T  G +Y WG  +Y  G LG G++ +   P  ++ + D + +   +C   H
Sbjct: 240 CGYAHTLVLTDEGQMYAWGANSY--GQLGTGNRSNQSYPVPITVDKDRV-IEIAACHSAH 296

Query: 363 TAVVTSAG 370
           T+   + G
Sbjct: 297 TSAAKTQG 304


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 152/335 (45%), Gaps = 31/335 (9%)

Query: 234 LPKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEIL 293
           LPK  E T A      A G  H++ VT  G + +WG  + G+LG G   + S P  + + 
Sbjct: 92  LPKGTEVTAA------AGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLP 145

Query: 294 SGVNVELVACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHL 353
            G  V  VA G  H+ A+T +G ++ WGD   ++G LG G++ +   P  VS    G  +
Sbjct: 146 PGTTVTAVAAGFNHSLALTSAGTVFAWGD--NSTGQLGDGTRTNRSTPVAVS-FPSGTVI 202

Query: 354 SYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVW 413
           + ++ G  H+  +TSAG +F +GD S G LG G   + S P  V    G   T ++ G  
Sbjct: 203 TAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGS 262

Query: 414 HTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQ 473
           H+ AV              TS G    WG+   G+LG G    R     V       +  
Sbjct: 263 HSLAV--------------TSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTA 308

Query: 474 VACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTR-VDGEIAES---FVEEVACG 529
           VA G   S+ALT+ G V + GS  +GQLG    DG    R   G ++      +  VA G
Sbjct: 309 VAGGLTHSLALTSVGTVLSWGSNNWGQLG----DGTARDRNTPGSVSLPPGVTITAVAAG 364

Query: 530 AYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSP 564
                ALTS   V  WG    GQLG G    R +P
Sbjct: 365 DLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 146/327 (44%), Gaps = 28/327 (8%)

Query: 264 EIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            + +WG+   G+LG G   +  + P  + +  G  V   A G+ H+ AVT +G +  WG 
Sbjct: 63  AVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGR 122

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
                G LG G+ ++   P  V     G  ++ ++ G  H+  +TSAG +F +GD S G 
Sbjct: 123 NAV--GQLGDGTTINRSTPVDVR-LPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179

Query: 383 LGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWG 442
           LG G   + S P  V    G   T V+ G  H+ A+              TS G +F WG
Sbjct: 180 LGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLAL--------------TSAGTVFAWG 225

Query: 443 DGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLG 502
           D   G+LG G +  R  P  V   +   +  +A G   S+A+T++G+    G+   GQLG
Sbjct: 226 DNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLG 285

Query: 503 VPVADGLVPTRVDGEI-----AESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
               DG    R D  +       + V  VA G  H  ALTS   V +WG    GQLG G 
Sbjct: 286 ----DGSNINR-DASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGT 340

Query: 558 KDNRNSPTLVDFLKDKQVKRVVCGLNF 584
             +RN+P  V       +  V  G  F
Sbjct: 341 ARDRNTPGSVSLPPGVTITAVAAGDLF 367



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 148/319 (46%), Gaps = 28/319 (8%)

Query: 185 VSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA 243
           V++++ G AH     S G V  WG   A G LG G      + S   D  LP     T  
Sbjct: 98  VTAAAGGDAHSLAVTSAGTVLAWGRN-AVGQLGDGTT---INRSTPVDVRLPPGTTVTA- 152

Query: 244 LDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVAC 303
                +A G  H++ +T  G +F+WG+ S G+LG G   + S P  +   SG  +  VA 
Sbjct: 153 -----VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAA 207

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  H+ A+T +G ++ WGD   ++G LG G++ +   P  V G   G  ++ I+ G  H+
Sbjct: 208 GGMHSLALTSAGTVFAWGD--NSTGQLGDGTRTNRSTP-VVVGLPVGTIVTAIAGGGSHS 264

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATD 423
             VTSAG+   +G+   G LG G +I+      V    G   T V+ G+ H+ A+     
Sbjct: 265 LAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLAL----- 319

Query: 424 SSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVA 483
                    TS G + +WG  + G+LG G    R  P  V+      I  VA G    +A
Sbjct: 320 ---------TSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLA 370

Query: 484 LTTSGHVYTMGSAAYGQLG 502
           LT++G V   G    GQLG
Sbjct: 371 LTSAGTVLAWGGNIVGQLG 389



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 125/288 (43%), Gaps = 30/288 (10%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSC-WIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTF 375
           +  WGD  Y  G LG G+  +   +P  V G   G  ++  + G  H+  VTSAG +  +
Sbjct: 64  VLAWGDNYY--GQLGDGTTNNYRTVPIPV-GLPKGTEVTAAAGGDAHSLAVTSAGTVLAW 120

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G  + G LG G  I+ S P +V    G   T V+ G  H+ A+              TS 
Sbjct: 121 GRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLAL--------------TSA 166

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
           G +F WGD   G+LG G +  R  P  V+      I  VA G   S+ALT++G V+  G 
Sbjct: 167 GTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGD 226

Query: 496 AAYGQLGVPVADGLVPTR----VDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            + GQLG    DG    R    V G    + V  +A G  H  A+TS      WG    G
Sbjct: 227 NSTGQLG----DGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVG 282

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN----FTAIICLHKWVS 595
           QLG G   NR++   V       V  V  GL      T++  +  W S
Sbjct: 283 QLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGS 330



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 437 KLFTWGDGDKGRLGHGDKEP-RLFPECVAPLIDENICQVACGHDLSVALTTSGHVYTMGS 495
            +  WGD   G+LG G     R  P  V       +   A G   S+A+T++G V   G 
Sbjct: 63  AVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGR 122

Query: 496 AAYGQLGVPVADGLVPTR---VDGEIAE-SFVEEVACGAYHVAALTSTSKVYTWGKGANG 551
            A GQLG    DG    R   VD  +   + V  VA G  H  ALTS   V+ WG  + G
Sbjct: 123 NAVGQLG----DGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTG 178

Query: 552 QLGHGDKDNRNSPTLVDFLKDKQVKRVVCG----LNFTAIICLHKW 593
           QLG G + NR++P  V F     +  V  G    L  T+   +  W
Sbjct: 179 QLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAW 224



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 14/205 (6%)

Query: 183 SVVSSSSHGSAHE-DFDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVEST 241
           +V+++ + G  H     S G VF WG+  + G LG G          +T+   P  V   
Sbjct: 200 TVITAVAAGGMHSLALTSAGTVFAWGDN-STGQLGDGT---------RTNRSTPVVVGLP 249

Query: 242 MALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELV 301
           +   V  IA G  H++ VT  G   +WG    G+LG G   +      + +  G  V  V
Sbjct: 250 VGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAV 309

Query: 302 ACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW 361
           A G  H+ A+T  G + +WG  + N G LG G+      P  VS    G+ ++ ++ G  
Sbjct: 310 AGGLTHSLALTSVGTVLSWG--SNNWGQLGDGTARDRNTPGSVS-LPPGVTITAVAAGDL 366

Query: 362 HTAVVTSAGHLFTFGDGSFGALGHG 386
               +TSAG +  +G    G LG G
Sbjct: 367 FGLALTSAGTVLAWGGNIVGQLGDG 391



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 478 HDLSVALTTSGHVYTMGSAAYGQLGVPVADGL------VPTRVDGEIAESFVEEVACGAY 531
           H  S     S  V   G   YGQLG    DG       VP  V G    + V   A G  
Sbjct: 52  HRPSPTTVASDAVLAWGDNYYGQLG----DGTTNNYRTVPIPV-GLPKGTEVTAAAGGDA 106

Query: 532 HVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLN 583
           H  A+TS   V  WG+ A GQLG G   NR++P  V       V  V  G N
Sbjct: 107 HSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFN 158


>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1011

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 146/342 (42%), Gaps = 49/342 (14%)

Query: 246 VHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE 305
           V N+  G   A+++T  G I+SWG  S G+LG   + D   P  I  L    +  +ACG+
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGK 282

Query: 306 YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAV 365
            H+ A+   G +Y WG+G    G LG        +P  V+   D + +  I+CG  H+  
Sbjct: 283 DHSLALDEIGCVYAWGNGA--GGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMA 340

Query: 366 VTSAGHLFTFGDGSFGALGHGDHIS-TSIPREVETLRGLRTTRVSCGVWHTAAVVVATDS 424
           V   G +F++G   FG LG+ + +   S PR VE++   +  +VSCG WH+  +      
Sbjct: 341 VCQDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPACK--QVSCGNWHSLTL------ 392

Query: 425 SSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVAL 484
                   T+ G ++ +G   +GR G         P  V    +  I ++  G + +  L
Sbjct: 393 --------TNGGDVYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVL 444

Query: 485 TTSGHVYTMGSAAYGQLGVPVADG-----------------------------LVPTRVD 515
           TTS  +YT G+   GQLGV +                                 VP  V 
Sbjct: 445 TTSNMIYTWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVK 504

Query: 516 GEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGD 557
             +    +  +  G  HV  LT   +V T+G     QLGHG+
Sbjct: 505 TLLPYP-INNIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGE 545



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 26/276 (9%)

Query: 317 LYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIH-LSYISCGLWHTAVVTSAGHLFTF 375
            Y WG        LG   KVS   P+ V  N    H +S +  G     ++T  G ++++
Sbjct: 191 FYQWGQMFTTQLSLG---KVST--PQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSW 245

Query: 376 GDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSC 435
           G  S+G LG        IP ++  L+  + T+++CG  H+ A+                 
Sbjct: 246 GLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLAL--------------DEI 291

Query: 436 GKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDE-NICQVACGHDLSVALTTSGHVYTMG 494
           G ++ WG+G  GRLG    +    P  VA   D+  +  +ACG D S+A+   G V++ G
Sbjct: 292 GCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWG 351

Query: 495 SAAYGQLGV--PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQ 552
            A +G+LG   P+     P RV+   A    ++V+CG +H   LT+   VY +G    G+
Sbjct: 352 QAGFGKLGYSNPMGFQSTPRRVESIPA---CKQVSCGNWHSLTLTNGGDVYAFGSNREGR 408

Query: 553 LGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFTAII 588
            G       + P  V F  + ++K++  GLNF A++
Sbjct: 409 CGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVL 444



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 136/299 (45%), Gaps = 36/299 (12%)

Query: 265 IFSWGEESGGRLGHGREADVSHPQ--LIEILSGVNVELVACGEYHTCAVTRSGDLYTWGD 322
            + WG+    +L  G+   VS PQ  L        V  V  G      +T +G +Y+WG 
Sbjct: 191 FYQWGQMFTTQLSLGK---VSTPQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGL 247

Query: 323 GTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGA 382
            +Y  G LG  SK  C IP ++   L    ++ I+CG  H+  +   G ++ +G+G+ G 
Sbjct: 248 CSY--GKLGQYSKNDCPIPSQIM-ELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGR 304

Query: 383 LGHGDHISTSIPREVETLRG-LRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTW 441
           LG       S+P  V      ++   ++CG  H+ AV                 G++F+W
Sbjct: 305 LGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVC--------------QDGRVFSW 350

Query: 442 GDGDKGRLGHGDKEPRLFPECVAPLIDENI--C-QVACGHDLSVALTTSGHVYTMGSAAY 498
           G    G+LG+ +  P  F     P   E+I  C QV+CG+  S+ LT  G VY  GS   
Sbjct: 351 GQAGFGKLGYSN--PMGFQS--TPRRVESIPACKQVSCGNWHSLTLTNGGDVYAFGSNRE 406

Query: 499 GQLGVPVAD-GLVPTRV--DGEIAESFVEEVACGAYHVAALTSTSKVYTWGKGANGQLG 554
           G+ G  +      P RV  D  I    ++++  G    A LT+++ +YTWG    GQLG
Sbjct: 407 GRCGRELTTVESPPNRVIFDANIK---IKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLG 462



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 144/326 (44%), Gaps = 64/326 (19%)

Query: 197 FDSLGDVFIWGEGIANGFLGGGEHRVGYSFSRQTDAL-LPKAVESTM-ALDVHNIACGAR 254
            D +G V+ WG G       GG  R+G +   +TD + LP  V      + V  IACG  
Sbjct: 288 LDEIGCVYAWGNG------AGG--RLGLN---KTDVVSLPTMVAHFPDQVKVVGIACGQD 336

Query: 255 HAVLVTKQGEIFSWGEESGGRLGHGREADV-SHPQLIEILSGVNVELVACGEYHTCAVTR 313
           H++ V + G +FSWG+   G+LG+       S P+ +E +     + V+CG +H+  +T 
Sbjct: 337 HSMAVCQDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPAC--KQVSCGNWHSLTLTN 394

Query: 314 SGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLF 373
            GD+Y +G      G  G         P +V  + + I +  I  GL   AV+T++  ++
Sbjct: 395 GGDVYAFGSN--REGRCGRELTTVESPPNRVIFDAN-IKIKKIGAGLNFNAVLTTSNMIY 451

Query: 374 TFGDGSFGALG------------------HGDHIS----------TSIPREVETLRGLRT 405
           T+G+   G LG                  + ++IS          T +P+ V+TL     
Sbjct: 452 TWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPI 511

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGD--KEPRLFPECV 463
             +  G  H   VVV TD+           G++ T+G     +LGHG+  ++   F + V
Sbjct: 512 NNIEVGYEH---VVVLTDA-----------GEVITFGSNQMDQLGHGELLRDAGTFRK-V 556

Query: 464 APLIDENICQVACGHDLSVALTTSGH 489
                  + ++A G+  S+   +SGH
Sbjct: 557 EIQNKSTVFKIAAGNYASLVSLSSGH 582



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 523 VEEVACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCG- 581
           V  V  G      LT T  +Y+WG  + G+LG   K++   P+ +  LK+KQ+ ++ CG 
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGK 282

Query: 582 ---LNFTAIICLHKW 593
              L    I C++ W
Sbjct: 283 DHSLALDEIGCVYAW 297


>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
          Length = 538

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 233 LLPKAVESTMALDVHNIACGA-RHAVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIE 291
           L PK +E     D+   ACG+  H + +T++GE++SWG  S   LG+G       P L+ 
Sbjct: 65  LYPKKIEVLCDKDIKTFACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVN 124

Query: 292 ILS---GVNVEL---VACGEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVS 345
           I +   G+N++    VACG +H+ A+T  G++Y WG    N G +G     +   PR+V+
Sbjct: 125 IPTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQN--NCGQVGSNISTNQGSPRQVT 182

Query: 346 GNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRT 405
            NL G  + +ISCG   + VVT  G ++ +G    G LG G++++   P  V +L G+  
Sbjct: 183 SNLAGKKIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVI 242

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
            +V+CG  HT A+              +  GKL+ WG    G+LG G+K     P  V  
Sbjct: 243 IKVACGYAHTLAL--------------SDEGKLYVWGGNSYGQLGIGNKTNACNPVLVTH 288

Query: 466 LIDENICQVACGH--DLSVALTTSGHVYTMGS 495
            +   I  +A  H   +S A+   G VY  G+
Sbjct: 289 EMGR-ISDIAALHYNHISTAVGVGGRVYMWGN 319



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 28/301 (9%)

Query: 256 AVLVTKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGE-YHTCAVTRS 314
           A+LV K   ++  G    G LG        +P+ IE+L   +++  ACG   H  A+T  
Sbjct: 36  ALLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLALTEK 95

Query: 315 GDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSY-----ISCGLWHTAVVTSA 369
           G++Y+WG  +Y    LG+G+      P  V+    G  L+      ++CG  H+  +T  
Sbjct: 96  GEVYSWGHNSYCE--LGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEE 153

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G ++ +G  + G +G     +   PR+V + L G +   +SCG   T+++VV        
Sbjct: 154 GEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCG--QTSSMVV-------- 203

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLIDENICQVACGHDLSVALTTSG 488
               T  G+++ WG    G+LG G+   ++ P  V  LI   I +VACG+  ++AL+  G
Sbjct: 204 ----TDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEG 259

Query: 489 HVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAY-HVA-ALTSTSKVYTW 545
            +Y  G  +YGQLG+    +   P  V  E+    + ++A   Y H++ A+    +VY W
Sbjct: 260 KLYVWGGNSYGQLGIGNKTNACNPVLVTHEMGR--ISDIAALHYNHISTAVGVGGRVYMW 317

Query: 546 G 546
           G
Sbjct: 318 G 318



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 25/261 (9%)

Query: 316 DLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW-HTAVVTSAGHLFT 374
           D   +G G   +G LG     S   P+K+    D   +   +CG   H   +T  G +++
Sbjct: 42  DKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDK-DIKTFACGSGPHVLALTEKGEVYS 100

Query: 375 FGDGSFGALGHGD------HISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           +G  S+  LG+G        I  +IP     L       V+CG  H+ A+          
Sbjct: 101 WGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLAL---------- 150

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFP-ECVAPLIDENICQVACGHDLSVALTTS 487
               T  G+++ WG  + G++G      +  P +  + L  + I  ++CG   S+ +T +
Sbjct: 151 ----TEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDN 206

Query: 488 GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G VY  G    GQLG+    + + P+RV G +    + +VACG  H  AL+   K+Y WG
Sbjct: 207 GEVYGWGYNGVGQLGIGNYVNQMTPSRV-GSLIGVVIIKVACGYAHTLALSDEGKLYVWG 265

Query: 547 KGANGQLGHGDKDNRNSPTLV 567
             + GQLG G+K N  +P LV
Sbjct: 266 GNSYGQLGIGNKTNACNPVLV 286



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 20/221 (9%)

Query: 372 LFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSG 431
           ++  G+   G LG  D  ST  P+++E L        +CG             S      
Sbjct: 45  VYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACG-------------SGPHVLA 91

Query: 432 STSCGKLFTWGDGDKGRLGHGDKEPRLFPECV------APLIDENICQVACGHDLSVALT 485
            T  G++++WG      LG+G     L P  V      A L  + I  VACG   S+ALT
Sbjct: 92  LTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALT 151

Query: 486 TSGHVYTMGSAAYGQLGVPVADGL-VPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYT 544
             G VY  G    GQ+G  ++     P +V   +A   +  ++CG      +T   +VY 
Sbjct: 152 EEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYG 211

Query: 545 WGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
           WG    GQLG G+  N+ +P+ V  L    + +V CG   T
Sbjct: 212 WGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHT 252



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 31/201 (15%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAVLV 259
           G+V+ WG+            +VG + S    +  P+ V S +A   + +I+CG   +++V
Sbjct: 154 GEVYAWGQNNCG--------QVGSNISTNQGS--PRQVTSNLAGKKIVHISCGQTSSMVV 203

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
           T  GE++ WG    G+LG G   +   P  +  L GV +  VACG  HT A++  G LY 
Sbjct: 204 TDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYV 263

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVS------GNLDGIHLSYISCGLWHTAVVTSAGHLF 373
           WG  +Y  G LG G+K +   P  V+       ++  +H ++IS        V   G ++
Sbjct: 264 WGGNSY--GQLGIGNKTNACNPVLVTHEMGRISDIAALHYNHIS------TAVGVGGRVY 315

Query: 374 TFGDGSFGALGHGDHISTSIP 394
            +G+        G  IST  P
Sbjct: 316 MWGN------CRGQSISTPTP 330


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 29/323 (8%)

Query: 232 ALLPKAVESTMALDVHNIAC--GARHAVL-VTKQGEIFSWGEESGGRLGHGREADVSHPQ 288
           AL P+ V     L     AC  GA + VL +TK  E+F  G  S G LG G    +  P+
Sbjct: 11  ALCPQEV-----LKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPR 65

Query: 289 LIEILSGVNVELVACGE-YHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGN 347
            I++LSG  +  ++ G   H   VT  G++Y+WG   Y+   LG+GS      P +VS N
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQ--LGNGSTNQALSPCQVSTN 123

Query: 348 LDGIHLSYISCGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTT 406
           L       ++CG  H+ V+T  G ++ +G  + G +G G   +  IPR+V + L+     
Sbjct: 124 LINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 407 RVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPL 466
            ++CG   + AVV                G+++ WG    G+LG G    +  P  +A L
Sbjct: 184 GIACGQMSSMAVV--------------DNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 467 IDENICQVACGHDLSVALTTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEE 525
               + QV CG+  ++ALT  G +Y  G+ +YGQLG    ++   P +V  +  E  VE 
Sbjct: 230 QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEI 288

Query: 526 VACGAYHVAALTSTS-KVYTWGK 547
            AC + H +A  S S +VY WG+
Sbjct: 289 AACHSSHTSAAKSQSGQVYMWGQ 311



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 33/298 (11%)

Query: 202 DVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGA-RHAVLVT 260
           +VF+ G   ++G LG G+ +           + P+ ++      + +++ G+  H V+VT
Sbjct: 41  EVFVMGTN-SSGCLGTGDAQ---------SIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT 90

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHP-QLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
             GE++SWG  +  +LG+G       P Q+   L       VACG +H+  +T  G++Y 
Sbjct: 91  SDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYA 150

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTSAGHLFTFGDGS 379
           WG    NSG +G GS  +  IPRKV+  L    +  I+CG   +  V   G ++ +G   
Sbjct: 151 WGYN--NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 380 FGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLF 439
            G LG G   +   P  +  L+G+R  +V CG  HT A+   TD            G ++
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL---TDE-----------GVMY 254

Query: 440 TWGDGDKGRLGHGDKEPRLFPECVAPLID-ENICQVACGHD--LSVALTTSGHVYTMG 494
            WG    G+LG G+K  + +P  V  ++D E I ++A  H    S A + SG VY  G
Sbjct: 255 AWGANSYGQLGTGNKSNQSYP--VQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 22/274 (8%)

Query: 311 VTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLW-HTAVVTSA 369
           +T++ +++  G  T +SG LG G   S   PR++   L G  +  +S G   H  +VTS 
Sbjct: 36  ITKNDEVFVMG--TNSSGCLGTGDAQSIIEPRRID-MLSGKRIVSLSYGSGPHVVIVTSD 92

Query: 370 GHLFTFGDGSFGALGHGDHISTSIPREVET-LRGLRTTRVSCGVWHTAAVVVATDSSSSS 428
           G ++++G  ++  LG+G       P +V T L   +   V+CG  H+  +V+  D     
Sbjct: 93  GEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHS--MVLTCD----- 145

Query: 429 PSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP-LIDENICQVACGHDLSVALTTS 487
                  G+++ WG  + G++G G    +  P  V   L ++ +  +ACG   S+A+  +
Sbjct: 146 -------GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDN 198

Query: 488 GHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVYTWG 546
           G VY  G    GQLG+    +   P R+   +    VE+V CG  H  ALT    +Y WG
Sbjct: 199 GEVYAWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257

Query: 547 KGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVC 580
             + GQLG G+K N++ P  V   K++ V+   C
Sbjct: 258 ANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAAC 291



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 366 VTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLRGLRTTRVSCGVWHTAAVVVATDSS 425
           +T    +F  G  S G LG GD  S   PR ++ L G R   +S G      +V      
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV------ 89

Query: 426 SSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP-LIDENICQVACGHDLSVAL 484
                  TS G++++WG     +LG+G     L P  V+  LI++    VACG   S+ L
Sbjct: 90  -------TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVL 142

Query: 485 TTSGHVYTMGSAAYGQLGV-PVADGLVPTRVDGEIAESFVEEVACGAYHVAALTSTSKVY 543
           T  G VY  G    GQ+G    A+  +P +V   +    V  +ACG     A+    +VY
Sbjct: 143 TCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVY 202

Query: 544 TWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNFT 585
            WG   NGQLG G   N+ +P  +  L+  +V++VVCG   T
Sbjct: 203 AWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHT 244



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 15/178 (8%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMA-LDVHNIACGARHAVLV 259
           G+V+ WG    +G +G G            +  +P+ V S +    V  IACG   ++ V
Sbjct: 146 GEVYAWGYN-NSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMAV 195

Query: 260 TKQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAVTRSGDLYT 319
              GE+++WG    G+LG G   +   P  I  L G+ VE V CG  HT A+T  G +Y 
Sbjct: 196 VDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYA 255

Query: 320 WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHTAVVTS-AGHLFTFG 376
           WG  +Y  G LG G+K +   P +V  + + I +   +C   HT+   S +G ++ +G
Sbjct: 256 WGANSY--GQLGTGNKSNQSYPVQVIVDKERI-VEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 201 GDVFIWGEGIANGFLGGGEHRVGYSFSRQTDALLPKAVESTMALDVHNIACGARHAVLVT 260
           G+V+ WG      + G G+  +G S ++ T    P  + +   + V  + CG  H + +T
Sbjct: 199 GEVYAWG------YNGNGQLGLGSSGNQPT----PCRIAALQGIRVEQVVCGYAHTLALT 248

Query: 261 KQGEIFSWGEESGGRLGHGREADVSHPQLIEILSGVNVELVACGEYHTCAV-TRSGDLYT 319
            +G +++WG  S G+LG G +++ S+P  + +     VE+ AC   HT A  ++SG +Y 
Sbjct: 249 DEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYM 308

Query: 320 WGDGTYNSGLLGHGSKVSC 338
           WG     S +  H +  SC
Sbjct: 309 WGQCRGQSVITPHLTHFSC 327


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 45/362 (12%)

Query: 235 PKAVESTMALDVHNIACGARHAVLVTKQGEIFSWGEESGGRLGHGREAD--VSHPQLIEI 292
           P+ + S   + +   A GA   +L++  G+++++G++S G   +G +    V+ PQL+E 
Sbjct: 188 PRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES 247

Query: 293 LSGVNVELVACGEYHTCAVTRSGDLYT--WGDGTYNSGLLGHGSKVSCWIPRKVSGNLDG 350
           L  + V   A G + T  ++R G +YT  WG    N   LGH ++ +   P  + G L+ 
Sbjct: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDAKLGHQTEANDLEPHPLLGALEN 303

Query: 351 IHLSYIS---CGLWHTAVVTSAGHLFTFGDGSFGALGHGDHISTSIPREVETLR--GLRT 405
           I +  I+   C L   A   +   +++ G G  G LGHG       PR +E  R   L+ 
Sbjct: 304 IPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQP 363

Query: 406 TRVSCGVWHTAAVVVATDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAP 465
             V+ G WH A  VV  D            G++ TWG G  G LGHG++E    P+ V  
Sbjct: 364 MVVAAGAWHAA--VVGRD------------GRVCTWGWGRYGCLGHGNEECESVPKVVEA 409

Query: 466 LIDENICQVACGHDLSVALTTSGHVYTMG---SAAYGQLGVPVADG------LVPTRVDG 516
           LI+     VA G   +  ++  G VY+ G   S++ G    P   G      L P  V  
Sbjct: 410 LINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTS 469

Query: 517 --EIAESFVE-EVACGAY---HVAALTSTSKVYTWGKGANGQLG---HGDKDNRNSPTLV 567
             +I E  V+  +    Y   H  ALT T K+Y +G G  GQLG     ++  R +P  V
Sbjct: 470 LKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNPERV 529

Query: 568 DF 569
           D 
Sbjct: 530 DI 531



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 47/304 (15%)

Query: 304 GEYHTCAVTRSGDLYTWGDGTYNSGLLGHGSKVSCWIPRKVSGNLDGIHLSYISCGLWHT 363
           G  H+ AVT  G +Y++G  +  SG LGHG+    W PR++  +L+GI +   + G   T
Sbjct: 153 GPGHSIAVTVKGAVYSFGSNS--SGQLGHGTTDEEWRPRQIR-SLEGIRIIQAAAGAGRT 209

Query: 364 AVVTSAGHLFTFGDGSFGALGHGDHIS--TSIPREVETLRGLRTTRVSCGVWHTAAVVVA 421
            +++ AG ++ FG  SFG   +G   +   + P+ VE+L+ +   + + G + TA +   
Sbjct: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVL--- 266

Query: 422 TDSSSSSPSGSTSCGKLFTWGDGDKGRLGHGDKEPRLFPECVAPLID--ENI--CQVACG 477
                      +  G+++T+  G+  +LGH  +   L P    PL+   ENI   Q+A G
Sbjct: 267 -----------SREGRVYTFSWGNDAKLGHQTEANDLEPH---PLLGALENIPVVQIAAG 312

Query: 478 HDLSVALTTSGH---VYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEE--------- 525
           +   +AL    +   VY++G    G+LG         TR D E     +E+         
Sbjct: 313 YCYLLALACQPNGMSVYSVGCGLGGKLGHG-------TRTD-EKHPRLIEQFRILNLQPM 364

Query: 526 -VACGAYHVAALTSTSKVYTWGKGANGQLGHGDKDNRNSPTLVDFLKDKQVKRVVCGLNF 584
            VA GA+H A +    +V TWG G  G LGHG+++  + P +V+ L + +   V  G   
Sbjct: 365 VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYT 424

Query: 585 TAII 588
           T ++
Sbjct: 425 TFVV 428



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 14/170 (8%)

Query: 229 QTDALLPKAVESTMALDVHN--IACGARHAVLVTKQGEIFSWGEESGGRLGHGREADVSH 286
           +TD   P+ +E    L++    +A GA HA +V + G + +WG    G LGHG E   S 
Sbjct: 344 RTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESV 403

Query: 287 PQLIEILSGVNVELVACGEYHTCAVTRSGDLYTWGDGT-----YNSGLLGHGSKVSCWIP 341
           P+++E L  V    VA G+Y T  V+  GD+Y++G G      +N+G  G G++ +  + 
Sbjct: 404 PKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILS 463

Query: 342 RKVSGNLDGIHLSYISCGL-----W--HTAVVTSAGHLFTFGDGSFGALG 384
            ++  +L  I    +   L     W  HT  +T  G L+ FG G  G LG
Sbjct: 464 PELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 513



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 473 QVACGHDLSVALTTSGHVYTMGSAAYGQLGVPVADGLVPTRVDGEIAESFVEEVACGAYH 532
           Q   G   S+A+T  G VY+ GS + GQLG    D     R    +    + + A GA  
Sbjct: 149 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGR 208

Query: 533 VAALTSTSKVYTWGKGANGQLGHGDKDNR--NSPTLVDFLKDKQVKRVVCGLNFTAII 588
              ++   +VY +GK + G+  +G +  +   +P LV+ LK+  V +   G  FTA++
Sbjct: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVL 266


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.130    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,920,510,753
Number of Sequences: 23463169
Number of extensions: 590128813
Number of successful extensions: 2220852
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5579
Number of HSP's successfully gapped in prelim test: 4937
Number of HSP's that attempted gapping in prelim test: 2080404
Number of HSP's gapped (non-prelim): 49112
length of query: 900
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 748
effective length of database: 8,792,793,679
effective search space: 6577009671892
effective search space used: 6577009671892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)