Query 002615
Match_columns 900
No_of_seqs 908 out of 4867
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 03:36:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002615.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002615hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05691 peptide synthase; Val 100.0 1.5E-54 3.1E-59 595.5 39.8 400 3-424 3903-4311(4334)
2 PRK12467 peptide synthase; Pro 100.0 1.3E-54 2.7E-59 590.2 37.7 396 2-423 3270-3674(3956)
3 PRK12467 peptide synthase; Pro 100.0 3.7E-54 7.9E-59 585.7 37.6 403 3-425 1752-2167(3956)
4 TIGR03443 alpha_am_amid L-amin 100.0 1.5E-53 3.2E-58 545.6 37.9 417 3-425 449-921 (1389)
5 PRK10252 entF enterobactin syn 100.0 5.3E-53 1.1E-57 539.4 40.2 403 2-424 631-1048(1296)
6 PRK12316 peptide synthase; Pro 100.0 5E-53 1.1E-57 584.0 38.8 392 3-425 689-1088(5163)
7 PRK12316 peptide synthase; Pro 100.0 8.3E-53 1.8E-57 581.9 40.2 399 3-425 2180-2587(5163)
8 PRK05691 peptide synthase; Val 100.0 1.4E-52 3E-57 576.0 41.1 394 3-425 1307-1709(4334)
9 PRK06060 acyl-CoA synthetase; 100.0 1.2E-51 2.6E-56 490.8 36.5 388 4-425 181-619 (705)
10 KOG4649 PQQ (pyrrolo-quinoline 100.0 4.6E-49 1E-53 364.0 32.6 352 536-896 2-354 (354)
11 KOG1176 Acyl-CoA synthetase [L 100.0 8.2E-50 1.8E-54 437.3 27.3 309 5-345 220-532 (537)
12 KOG1177 Long chain fatty acid 100.0 2.4E-47 5.3E-52 384.8 24.9 315 3-344 268-586 (596)
13 COG0365 Acs Acyl-coenzyme A sy 100.0 6.2E-47 1.3E-51 411.9 27.0 310 3-344 206-521 (528)
14 PLN02654 acetate-CoA ligase 100.0 2.3E-44 5E-49 423.2 33.2 323 3-345 310-640 (666)
15 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.7E-43 3.7E-48 416.2 33.3 324 3-346 271-603 (625)
16 PLN02860 o-succinylbenzoate-Co 100.0 1E-43 2.2E-48 412.6 30.5 323 3-346 206-555 (563)
17 PRK00174 acetyl-CoA synthetase 100.0 3.4E-43 7.4E-48 414.2 34.2 324 3-346 280-611 (637)
18 COG0318 CaiC Acyl-CoA syntheta 100.0 5.2E-44 1.1E-48 408.9 25.8 315 4-345 206-527 (534)
19 TIGR02316 propion_prpE propion 100.0 2.7E-43 5.9E-48 413.5 32.4 325 3-345 267-604 (628)
20 PTZ00237 acetyl-CoA synthetase 100.0 3.5E-43 7.5E-48 411.8 31.4 319 4-345 290-623 (647)
21 PRK07788 acyl-CoA synthetase; 100.0 1.1E-42 2.5E-47 403.5 31.1 305 3-342 241-548 (549)
22 PLN03051 acyl-activating enzym 100.0 1.4E-42 3.1E-47 396.5 30.2 322 4-344 154-490 (499)
23 PRK06334 long chain fatty acid 100.0 1.7E-42 3.6E-47 399.1 30.6 305 3-343 217-533 (539)
24 COG1021 EntE Peptide arylation 100.0 1.3E-43 2.8E-48 349.3 15.5 307 3-343 223-536 (542)
25 PRK03584 acetoacetyl-CoA synth 100.0 9.2E-42 2E-46 403.0 34.2 324 3-346 298-626 (655)
26 PRK07529 AMP-binding domain pr 100.0 1.1E-41 2.3E-46 399.5 30.4 310 3-343 247-568 (632)
27 PRK04319 acetyl-CoA synthetase 100.0 9.5E-42 2.1E-46 397.1 28.5 313 3-343 239-557 (570)
28 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.9E-41 8.5E-46 395.3 33.5 320 4-345 300-626 (652)
29 PRK10524 prpE propionyl-CoA sy 100.0 2E-41 4.3E-46 399.0 31.1 325 3-345 268-605 (629)
30 PLN02574 4-coumarate--CoA liga 100.0 3.5E-41 7.7E-46 391.1 29.4 306 9-344 243-553 (560)
31 KOG1175 Acyl-CoA synthetase [L 100.0 3.4E-41 7.4E-46 366.5 26.3 323 2-346 273-603 (626)
32 PRK13382 acyl-CoA synthetase; 100.0 7.8E-41 1.7E-45 386.2 30.7 303 4-341 231-536 (537)
33 PRK05851 long-chain-fatty-acid 100.0 4.6E-41 1E-45 386.9 26.2 316 3-344 186-521 (525)
34 PLN02246 4-coumarate--CoA liga 100.0 1.4E-40 3.1E-45 384.9 30.3 312 4-343 218-534 (537)
35 PRK13390 acyl-CoA synthetase; 100.0 2.4E-40 5.2E-45 380.0 30.4 310 4-340 189-501 (501)
36 PRK13295 cyclohexanecarboxylat 100.0 6E-40 1.3E-44 380.3 32.2 308 3-344 231-543 (547)
37 PRK08314 long-chain-fatty-acid 100.0 2.4E-40 5.2E-45 384.6 28.5 311 3-342 224-539 (546)
38 PLN02736 long-chain acyl-CoA s 100.0 1.1E-40 2.3E-45 392.9 25.5 313 3-348 255-644 (651)
39 PRK07638 acyl-CoA synthetase; 100.0 3.8E-40 8.2E-45 376.9 27.5 302 3-345 177-481 (487)
40 PRK06839 acyl-CoA synthetase; 100.0 8.7E-40 1.9E-44 375.7 30.7 306 4-343 184-493 (496)
41 PRK07445 O-succinylbenzoic aci 100.0 4.7E-40 1E-44 368.9 27.7 294 4-346 155-448 (452)
42 PRK06145 acyl-CoA synthetase; 100.0 7E-40 1.5E-44 376.2 29.7 308 4-343 184-495 (497)
43 PRK05852 acyl-CoA synthetase; 100.0 4.9E-40 1.1E-44 380.1 28.6 318 3-344 210-531 (534)
44 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.7E-39 3.6E-44 373.8 32.7 321 3-343 175-500 (502)
45 PRK05857 acyl-CoA synthetase; 100.0 9.1E-40 2E-44 377.5 29.1 311 5-344 209-530 (540)
46 PLN03052 acetate--CoA ligase; 100.0 1.8E-39 4E-44 382.0 31.1 319 4-345 391-721 (728)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.9E-39 4.2E-44 374.5 30.1 304 3-340 217-527 (527)
48 PRK07787 acyl-CoA synthetase; 100.0 1.7E-39 3.7E-44 369.3 29.0 301 3-341 162-469 (471)
49 PRK03640 O-succinylbenzoic aci 100.0 1.4E-39 3E-44 372.5 28.1 304 4-344 176-481 (483)
50 PRK10946 entE enterobactin syn 100.0 2.5E-39 5.4E-44 373.9 28.6 309 3-344 216-531 (536)
51 PRK08043 bifunctional acyl-[ac 100.0 2E-39 4.3E-44 386.2 28.6 310 3-344 399-712 (718)
52 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 6.7E-39 1.4E-43 371.0 32.2 304 3-340 229-537 (538)
53 PRK08315 AMP-binding domain pr 100.0 2.7E-39 5.9E-44 376.9 29.0 314 3-345 233-551 (559)
54 PRK07656 long-chain-fatty-acid 100.0 4E-39 8.6E-44 372.1 29.6 309 3-341 200-512 (513)
55 PRK05677 long-chain-fatty-acid 100.0 3.1E-39 6.8E-44 375.3 28.9 301 10-343 251-555 (562)
56 PRK07769 long-chain-fatty-acid 100.0 6.9E-40 1.5E-44 385.7 23.5 339 3-344 214-613 (631)
57 PRK05620 long-chain-fatty-acid 100.0 4.3E-39 9.2E-44 375.4 29.4 332 4-345 218-557 (576)
58 PRK07786 long-chain-fatty-acid 100.0 4.4E-39 9.5E-44 372.7 29.1 313 5-347 210-526 (542)
59 PRK13391 acyl-CoA synthetase; 100.0 7E-39 1.5E-43 368.6 30.2 313 3-344 193-508 (511)
60 PRK12583 acyl-CoA synthetase; 100.0 4.3E-39 9.3E-44 375.4 28.7 313 3-344 235-551 (558)
61 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.1E-38 2.5E-43 368.3 31.0 317 3-341 195-514 (515)
62 PRK08316 acyl-CoA synthetase; 100.0 6.8E-39 1.5E-43 371.1 29.0 311 4-346 206-520 (523)
63 PLN02330 4-coumarate--CoA liga 100.0 6E-39 1.3E-43 371.9 28.0 311 9-345 226-541 (546)
64 PRK06188 acyl-CoA synthetase; 100.0 7.6E-39 1.6E-43 369.8 28.2 312 3-344 202-516 (524)
65 PRK06155 crotonobetaine/carnit 100.0 1.4E-38 3E-43 367.6 30.0 303 3-343 214-522 (542)
66 PRK09274 peptide synthase; Pro 100.0 1E-38 2.2E-43 371.0 28.3 320 3-344 208-547 (552)
67 PLN02614 long-chain acyl-CoA s 100.0 3.8E-39 8.3E-44 378.0 24.4 314 6-352 265-656 (666)
68 PRK07008 long-chain-fatty-acid 100.0 1.5E-38 3.3E-43 367.5 29.1 314 3-344 212-532 (539)
69 PRK08276 long-chain-fatty-acid 100.0 1.3E-38 2.9E-43 365.9 28.1 308 8-344 185-495 (502)
70 PRK07470 acyl-CoA synthetase; 100.0 9.7E-39 2.1E-43 369.3 26.8 313 6-344 202-517 (528)
71 PRK04813 D-alanine--poly(phosp 100.0 4.8E-38 1E-42 362.1 32.3 321 3-343 177-501 (503)
72 PRK05605 long-chain-fatty-acid 100.0 1.9E-38 4.2E-43 370.2 29.2 302 9-344 261-568 (573)
73 PRK08633 2-acyl-glycerophospho 100.0 1.3E-38 2.8E-43 403.3 29.2 318 3-344 816-1142(1146)
74 PRK12406 long-chain-fatty-acid 100.0 4.5E-38 9.8E-43 361.9 30.8 310 3-344 189-502 (509)
75 PRK07868 acyl-CoA synthetase; 100.0 3.2E-38 6.8E-43 384.0 30.3 300 3-345 639-958 (994)
76 PRK09088 acyl-CoA synthetase; 100.0 3.9E-38 8.4E-43 360.7 29.2 308 4-344 170-484 (488)
77 PRK07514 malonyl-CoA synthase; 100.0 3.5E-38 7.5E-43 363.0 28.1 306 3-344 190-500 (504)
78 PRK13383 acyl-CoA synthetase; 100.0 7.5E-38 1.6E-42 360.3 30.8 302 4-340 211-515 (516)
79 PRK06187 long-chain-fatty-acid 100.0 4.4E-38 9.5E-43 364.4 27.8 313 3-344 201-518 (521)
80 PRK06164 acyl-CoA synthetase; 100.0 6E-38 1.3E-42 363.8 28.9 308 3-344 215-531 (540)
81 PRK07824 O-succinylbenzoic aci 100.0 1.3E-37 2.8E-42 340.4 30.0 283 8-344 72-356 (358)
82 PRK07867 acyl-CoA synthetase; 100.0 9.2E-38 2E-42 359.3 30.1 302 3-345 186-507 (529)
83 PRK12492 long-chain-fatty-acid 100.0 1.1E-37 2.5E-42 362.2 30.4 300 10-342 258-561 (562)
84 PRK12476 putative fatty-acid-- 100.0 2.4E-38 5.3E-43 370.8 23.6 336 4-344 228-605 (612)
85 PLN03102 acyl-activating enzym 100.0 9E-38 2E-42 363.1 28.1 315 5-345 222-554 (579)
86 TIGR02262 benz_CoA_lig benzoat 100.0 1.3E-37 2.8E-42 358.1 28.6 309 3-342 196-508 (508)
87 PRK06710 long-chain-fatty-acid 100.0 9.1E-38 2E-42 363.7 27.4 307 5-345 243-555 (563)
88 PRK13388 acyl-CoA synthetase; 100.0 1.8E-37 4E-42 358.1 28.1 305 3-346 184-507 (540)
89 TIGR01923 menE O-succinylbenzo 100.0 1.7E-37 3.7E-42 350.4 27.2 292 3-339 145-436 (436)
90 PLN02861 long-chain-fatty-acid 100.0 5.3E-38 1.1E-42 369.0 23.3 313 7-352 263-653 (660)
91 PRK06087 short chain acyl-CoA 100.0 1.3E-37 2.9E-42 361.3 26.3 312 3-346 221-537 (547)
92 PRK06018 putative acyl-CoA syn 100.0 4.9E-37 1.1E-41 355.5 30.3 315 3-345 213-534 (542)
93 PRK08008 caiC putative crotono 100.0 5.2E-37 1.1E-41 354.1 30.1 302 5-340 209-517 (517)
94 PRK08279 long-chain-acyl-CoA s 100.0 6.7E-37 1.5E-41 358.7 28.8 311 3-346 233-565 (600)
95 PRK09029 O-succinylbenzoic aci 100.0 6E-37 1.3E-41 347.4 26.2 284 3-344 169-452 (458)
96 PRK06814 acylglycerophosphoeth 100.0 8.3E-37 1.8E-41 384.6 30.2 305 3-346 827-1133(1140)
97 TIGR03205 pimA dicarboxylate-- 100.0 1.5E-36 3.3E-41 351.6 29.5 300 8-340 236-541 (541)
98 PTZ00342 acyl-CoA synthetase; 100.0 1.2E-36 2.6E-41 354.9 27.5 307 8-347 345-736 (746)
99 PRK08751 putative long-chain f 100.0 1.2E-36 2.6E-41 354.3 27.5 303 7-342 250-557 (560)
100 PRK07059 Long-chain-fatty-acid 100.0 2E-36 4.4E-41 351.9 28.7 300 10-342 252-555 (557)
101 PRK07798 acyl-CoA synthetase; 100.0 6.3E-36 1.4E-40 347.3 32.2 307 8-344 217-531 (533)
102 PLN02387 long-chain-fatty-acid 100.0 1.1E-36 2.5E-41 359.0 25.3 321 5-349 287-693 (696)
103 PRK06178 acyl-CoA synthetase; 100.0 4.6E-36 1E-40 349.7 28.9 312 5-344 246-564 (567)
104 PRK08180 feruloyl-CoA synthase 100.0 7.4E-37 1.6E-41 358.1 21.1 318 4-353 244-604 (614)
105 PLN02479 acetate-CoA ligase 100.0 1.1E-35 2.5E-40 345.6 29.5 316 4-344 230-557 (567)
106 PRK08974 long-chain-fatty-acid 100.0 1.1E-35 2.3E-40 346.1 29.0 302 8-343 248-553 (560)
107 PRK08308 acyl-CoA synthetase; 100.0 1.7E-35 3.6E-40 330.4 27.9 273 3-340 135-408 (414)
108 PRK09192 acyl-CoA synthetase; 100.0 1E-35 2.3E-40 346.8 26.5 322 4-346 212-567 (579)
109 PLN02430 long-chain-fatty-acid 100.0 9.7E-36 2.1E-40 348.9 25.1 313 6-351 262-652 (660)
110 PTZ00216 acyl-CoA synthetase; 100.0 4.6E-36 1E-40 355.0 22.3 316 7-351 307-697 (700)
111 PRK08162 acyl-CoA synthetase; 100.0 4E-34 8.7E-39 332.1 29.8 313 4-344 217-538 (545)
112 PRK12582 acyl-CoA synthetase; 100.0 2.3E-35 4.9E-40 346.3 19.5 313 10-354 264-616 (624)
113 PRK05850 acyl-CoA synthetase; 100.0 1.5E-34 3.2E-39 337.9 25.8 330 7-345 204-568 (578)
114 COG1022 FAA1 Long-chain acyl-C 100.0 7.8E-35 1.7E-39 321.6 22.0 304 3-349 225-605 (613)
115 TIGR03300 assembly_YfgL outer 100.0 1E-32 2.2E-37 302.9 37.5 316 532-890 39-376 (377)
116 PRK07768 long-chain-fatty-acid 100.0 1.1E-33 2.4E-38 328.2 28.4 323 4-344 187-544 (545)
117 PRK11138 outer membrane biogen 100.0 2.5E-32 5.4E-37 300.3 36.1 316 532-892 43-393 (394)
118 KOG1178 Non-ribosomal peptide 100.0 2.1E-33 4.5E-38 320.8 25.7 415 2-427 229-671 (1032)
119 KOG1256 Long-chain acyl-CoA sy 100.0 2.2E-32 4.8E-37 296.4 22.1 310 9-351 301-686 (691)
120 KOG1180 Acyl-CoA synthetase [L 100.0 3.2E-32 6.8E-37 280.5 15.4 320 5-349 274-673 (678)
121 cd00216 PQQ_DH Dehydrogenases 100.0 7.4E-30 1.6E-34 285.9 35.0 321 531-886 37-459 (488)
122 TIGR01733 AA-adenyl-dom amino 100.0 3.4E-30 7.3E-35 288.4 23.7 252 3-271 154-408 (408)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.4E-30 1.6E-34 276.1 25.2 254 4-335 130-386 (386)
124 TIGR03300 assembly_YfgL outer 100.0 9.1E-28 2E-32 263.7 32.6 285 575-898 38-343 (377)
125 PRK11138 outer membrane biogen 100.0 2.1E-27 4.5E-32 261.3 31.8 283 575-898 42-358 (394)
126 PF00501 AMP-binding: AMP-bind 100.0 8.5E-29 1.8E-33 277.7 19.2 214 11-247 197-417 (417)
127 TIGR02155 PA_CoA_ligase phenyl 100.0 2.6E-27 5.6E-32 264.1 29.0 287 4-337 113-418 (422)
128 KOG1179 Very long-chain acyl-C 99.9 1.7E-25 3.8E-30 232.2 21.3 308 3-342 276-610 (649)
129 COG1020 EntF Non-ribosomal pep 99.9 6.8E-26 1.5E-30 268.2 20.8 239 3-264 400-642 (642)
130 cd00216 PQQ_DH Dehydrogenases 99.9 2.2E-24 4.7E-29 241.8 31.6 292 572-899 34-430 (488)
131 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.9 1.1E-23 2.4E-28 235.5 35.1 319 531-882 45-521 (527)
132 KOG4649 PQQ (pyrrolo-quinoline 99.9 9.5E-23 2.1E-27 189.9 24.5 286 534-841 44-352 (354)
133 TIGR03074 PQQ_membr_DH membran 99.9 1.6E-20 3.6E-25 214.9 37.2 214 531-752 162-485 (764)
134 TIGR03335 F390_ftsA coenzyme F 99.9 3.8E-20 8.3E-25 206.1 28.3 218 5-267 125-359 (445)
135 PF13360 PQQ_2: PQQ-like domai 99.9 8.3E-20 1.8E-24 187.5 28.4 222 566-795 2-238 (238)
136 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.9 5.1E-19 1.1E-23 198.2 33.2 307 572-899 42-496 (527)
137 COG1541 PaaK Coenzyme F390 syn 99.8 7.2E-19 1.6E-23 183.9 26.2 284 5-336 129-430 (438)
138 PTZ00297 pantothenate kinase; 99.8 2.6E-19 5.7E-24 217.9 22.0 283 6-353 641-1003(1452)
139 PRK09188 serine/threonine prot 99.8 9.5E-20 2.1E-24 192.1 14.8 119 216-346 207-329 (365)
140 COG1520 FOG: WD40-like repeat 99.8 1.7E-17 3.6E-22 181.0 32.6 312 559-892 24-363 (370)
141 COG1520 FOG: WD40-like repeat 99.8 1.1E-17 2.4E-22 182.4 31.2 285 532-838 42-362 (370)
142 PF13360 PQQ_2: PQQ-like domai 99.8 1.2E-17 2.6E-22 171.4 28.5 217 608-842 2-232 (238)
143 TIGR03074 PQQ_membr_DH membran 99.8 6.1E-17 1.3E-21 185.8 33.6 221 569-795 156-485 (764)
144 KOG0296 Angio-associated migra 99.7 1.5E-14 3.3E-19 142.0 30.6 307 556-892 75-397 (399)
145 KOG0296 Angio-associated migra 99.7 7.4E-15 1.6E-19 144.2 25.6 289 592-898 69-361 (399)
146 KOG0271 Notchless-like WD40 re 99.7 3.8E-15 8.1E-20 146.7 22.7 271 556-842 126-441 (480)
147 KOG0279 G protein beta subunit 99.7 4.3E-14 9.3E-19 134.1 26.8 275 557-840 28-313 (315)
148 cd00200 WD40 WD40 domain, foun 99.7 5.9E-14 1.3E-18 148.0 31.5 267 556-838 20-289 (289)
149 KOG0316 Conserved WD40 repeat- 99.7 1.7E-14 3.6E-19 133.1 22.6 243 553-801 25-271 (307)
150 cd00200 WD40 WD40 domain, foun 99.6 3.8E-13 8.3E-18 141.7 30.4 272 590-891 12-289 (289)
151 KOG0286 G-protein beta subunit 99.6 4.8E-13 1E-17 127.8 27.2 268 556-837 66-342 (343)
152 KOG0315 G-protein beta subunit 99.6 4.7E-13 1E-17 124.8 25.4 265 560-842 13-290 (311)
153 KOG0291 WD40-repeat-containing 99.6 6.9E-13 1.5E-17 142.0 28.8 286 555-845 317-617 (893)
154 KOG0291 WD40-repeat-containing 99.6 2.2E-12 4.8E-17 138.2 32.2 328 556-899 276-618 (893)
155 KOG0316 Conserved WD40 repeat- 99.6 3.2E-13 7E-18 124.8 22.4 234 592-842 22-259 (307)
156 KOG0271 Notchless-like WD40 re 99.6 1.9E-13 4E-18 134.9 19.7 289 583-898 111-444 (480)
157 KOG0275 Conserved WD40 repeat- 99.6 2.2E-14 4.8E-19 137.9 12.0 269 555-837 223-506 (508)
158 KOG0285 Pleiotropic regulator 99.5 7.4E-13 1.6E-17 129.6 21.4 270 556-842 162-441 (460)
159 KOG0318 WD40 repeat stress pro 99.5 1.3E-11 2.8E-16 127.2 30.9 308 557-899 160-479 (603)
160 KOG0286 G-protein beta subunit 99.5 2.8E-11 6.1E-16 115.8 28.2 269 592-890 60-342 (343)
161 KOG0315 G-protein beta subunit 99.5 4.7E-12 1E-16 118.2 22.3 262 535-798 23-299 (311)
162 KOG0274 Cdc4 and related F-box 99.5 8.5E-12 1.8E-16 138.5 28.5 266 556-846 217-488 (537)
163 KOG0285 Pleiotropic regulator 99.5 2.4E-12 5.1E-17 126.2 20.9 277 591-893 155-439 (460)
164 KOG0266 WD40 repeat-containing 99.5 7.1E-12 1.5E-16 139.8 27.4 273 553-839 167-453 (456)
165 KOG0318 WD40 repeat stress pro 99.5 1E-10 2.2E-15 120.7 31.6 318 541-897 192-521 (603)
166 KOG2048 WD40 repeat protein [G 99.5 7.1E-11 1.5E-15 125.7 31.0 193 556-752 79-283 (691)
167 KOG0282 mRNA splicing factor [ 99.5 8.1E-13 1.8E-17 134.8 15.3 270 598-891 226-503 (503)
168 KOG0282 mRNA splicing factor [ 99.4 1.4E-12 3E-17 133.1 15.3 268 556-838 226-503 (503)
169 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 3.5E-10 7.6E-15 120.6 35.1 265 560-842 4-281 (300)
170 KOG0272 U4/U6 small nuclear ri 99.4 5.1E-12 1.1E-16 126.8 18.3 269 556-838 186-458 (459)
171 PLN00181 protein SPA1-RELATED; 99.4 1.4E-10 3.1E-15 139.8 34.6 282 553-839 491-792 (793)
172 KOG0274 Cdc4 and related F-box 99.4 2.1E-11 4.6E-16 135.4 25.2 265 599-898 218-487 (537)
173 KOG0275 Conserved WD40 repeat- 99.4 1.3E-12 2.7E-17 126.0 13.2 237 592-843 218-470 (508)
174 KOG1446 Histone H3 (Lys4) meth 99.4 3.5E-10 7.6E-15 110.1 29.9 242 553-797 22-272 (311)
175 COG4993 Gcd Glucose dehydrogen 99.4 3E-11 6.6E-16 127.4 24.3 214 530-750 181-494 (773)
176 KOG0279 G protein beta subunit 99.4 2.3E-10 4.9E-15 109.1 26.4 265 598-893 27-313 (315)
177 KOG0272 U4/U6 small nuclear ri 99.4 1.6E-11 3.5E-16 123.3 18.7 273 591-891 179-458 (459)
178 PLN00181 protein SPA1-RELATED; 99.4 2.8E-10 6E-15 137.3 32.9 285 588-892 484-792 (793)
179 KOG1036 Mitotic spindle checkp 99.4 9.2E-11 2E-15 113.5 22.6 235 554-796 22-271 (323)
180 KOG0273 Beta-transducin family 99.4 1.7E-10 3.7E-15 117.5 25.5 273 591-893 239-523 (524)
181 KOG0273 Beta-transducin family 99.4 1.3E-10 2.9E-15 118.3 24.6 270 553-840 243-523 (524)
182 KOG2106 Uncharacterized conser 99.4 5.3E-10 1.1E-14 114.8 28.8 293 565-895 178-479 (626)
183 TIGR02304 aden_form_hyp probab 99.4 3.3E-11 7.2E-16 130.8 21.6 178 47-275 173-367 (430)
184 KOG0647 mRNA export protein (c 99.4 1.2E-10 2.6E-15 112.2 22.0 243 543-796 31-290 (347)
185 KOG0281 Beta-TrCP (transducin 99.4 3E-12 6.5E-17 124.8 11.0 274 597-895 205-479 (499)
186 KOG1539 WD repeat protein [Gen 99.4 6E-10 1.3E-14 121.4 29.0 315 557-898 172-611 (910)
187 KOG2106 Uncharacterized conser 99.4 6.4E-09 1.4E-13 107.1 34.4 267 553-842 208-479 (626)
188 KOG0266 WD40 repeat-containing 99.3 4.5E-10 9.8E-15 125.4 27.3 241 592-842 164-411 (456)
189 KOG0295 WD40 repeat-containing 99.3 9E-11 1.9E-15 115.8 18.8 238 592-842 113-366 (406)
190 KOG0265 U5 snRNP-specific prot 99.3 5.2E-10 1.1E-14 107.8 23.1 266 555-836 57-334 (338)
191 KOG0319 WD40-repeat-containing 99.3 2.9E-10 6.4E-15 122.2 23.3 337 535-894 87-443 (775)
192 KOG2048 WD40 repeat protein [G 99.3 8.5E-10 1.9E-14 117.6 26.5 279 591-892 29-318 (691)
193 KOG1446 Histone H3 (Lys4) meth 99.3 7.1E-09 1.5E-13 101.2 29.9 236 591-842 18-264 (311)
194 PF13193 AMP-binding_C: AMP-bi 99.3 1.1E-11 2.5E-16 99.2 8.8 70 255-333 1-73 (73)
195 KOG0299 U3 snoRNP-associated p 99.3 2.5E-10 5.5E-15 116.2 19.8 276 590-882 145-444 (479)
196 KOG3628 Predicted AMP-binding 99.3 3.3E-10 7.1E-15 127.3 22.5 322 7-342 981-1348(1363)
197 TIGR03866 PQQ_ABC_repeats PQQ- 99.3 5.4E-09 1.2E-13 111.4 31.4 271 601-898 3-284 (300)
198 KOG0319 WD40-repeat-containing 99.3 5.9E-10 1.3E-14 119.9 23.3 308 556-893 73-395 (775)
199 KOG0278 Serine/threonine kinas 99.3 3.8E-11 8.3E-16 112.2 12.5 270 596-895 26-299 (334)
200 KOG0293 WD40 repeat-containing 99.3 2.8E-10 6E-15 114.0 19.0 271 555-840 234-513 (519)
201 KOG0293 WD40 repeat-containing 99.2 4.8E-10 1E-14 112.3 18.6 270 593-894 230-514 (519)
202 KOG0281 Beta-TrCP (transducin 99.2 2.6E-11 5.6E-16 118.3 9.3 222 641-896 207-431 (499)
203 KOG0276 Vesicle coat complex C 99.2 1.4E-09 3.1E-14 114.5 22.4 243 542-793 16-263 (794)
204 KOG0265 U5 snRNP-specific prot 99.2 2.9E-09 6.2E-14 102.8 22.5 272 591-889 51-334 (338)
205 KOG0292 Vesicle coat complex C 99.2 3.8E-09 8.3E-14 115.7 26.1 299 556-895 20-350 (1202)
206 KOG0294 WD40 repeat-containing 99.2 3.9E-09 8.5E-14 102.5 22.8 266 559-842 3-283 (362)
207 KOG0310 Conserved WD40 repeat- 99.2 1.5E-09 3.2E-14 111.6 20.1 261 563-840 44-309 (487)
208 KOG0639 Transducin-like enhanc 99.2 3.6E-10 7.7E-15 115.8 15.4 261 513-783 437-700 (705)
209 KOG1036 Mitotic spindle checkp 99.2 5.5E-09 1.2E-13 101.4 22.6 238 590-842 16-264 (323)
210 KOG0278 Serine/threonine kinas 99.2 4.4E-10 9.5E-15 105.2 14.6 267 557-843 29-300 (334)
211 PF02239 Cytochrom_D1: Cytochr 99.2 3.5E-08 7.6E-13 106.0 31.0 313 558-899 6-353 (369)
212 KOG0276 Vesicle coat complex C 99.2 3E-09 6.5E-14 112.2 21.8 237 592-842 18-259 (794)
213 KOG0295 WD40 repeat-containing 99.2 1.9E-09 4.1E-14 106.7 18.4 273 554-838 117-404 (406)
214 KOG0313 Microtubule binding pr 99.2 1.7E-08 3.7E-13 100.5 24.8 265 557-839 115-417 (423)
215 PTZ00421 coronin; Provisional 99.2 3.4E-08 7.4E-13 109.9 30.3 204 590-796 78-299 (493)
216 KOG0301 Phospholipase A2-activ 99.2 3.9E-09 8.3E-14 113.0 21.3 262 597-894 23-289 (745)
217 PTZ00420 coronin; Provisional 99.1 2.4E-08 5.3E-13 111.6 28.5 225 563-791 50-297 (568)
218 KOG0310 Conserved WD40 repeat- 99.1 2.9E-09 6.2E-14 109.5 19.2 272 591-892 30-308 (487)
219 KOG0646 WD40 repeat protein [G 99.1 2.5E-09 5.3E-14 109.4 18.5 271 609-897 18-311 (476)
220 KOG0284 Polyadenylation factor 99.1 5E-10 1.1E-14 112.2 13.2 275 550-839 101-379 (464)
221 KOG1539 WD repeat protein [Gen 99.1 3.4E-08 7.3E-13 108.1 28.0 311 544-892 207-647 (910)
222 KOG0639 Transducin-like enhanc 99.1 1.7E-09 3.8E-14 110.9 17.2 267 553-838 427-702 (705)
223 KOG0299 U3 snoRNP-associated p 99.1 4.8E-09 1E-13 107.0 19.9 231 554-789 151-412 (479)
224 KOG0643 Translation initiation 99.1 3.7E-08 8E-13 93.6 24.0 266 555-840 20-317 (327)
225 KOG0294 WD40 repeat-containing 99.1 2.2E-08 4.9E-13 97.4 22.6 261 601-895 3-283 (362)
226 KOG0646 WD40 repeat protein [G 99.1 3.9E-09 8.5E-14 107.9 17.9 262 567-843 18-310 (476)
227 KOG0301 Phospholipase A2-activ 99.1 6.9E-09 1.5E-13 111.1 20.4 258 556-840 24-288 (745)
228 COG3292 Predicted periplasmic 99.1 6.9E-09 1.5E-13 109.1 18.8 315 546-896 164-494 (671)
229 TIGR02658 TTQ_MADH_Hv methylam 99.1 5.1E-07 1.1E-11 94.6 32.8 267 557-842 12-332 (352)
230 KOG0288 WD40 repeat protein Ti 99.1 2E-09 4.3E-14 108.2 13.2 265 556-837 186-458 (459)
231 PTZ00420 coronin; Provisional 99.0 1.3E-07 2.8E-12 105.9 28.8 223 607-842 52-295 (568)
232 PTZ00421 coronin; Provisional 99.0 6.3E-08 1.4E-12 107.8 26.1 195 556-751 87-297 (493)
233 KOG0313 Microtubule binding pr 99.0 8.3E-08 1.8E-12 95.8 23.7 268 599-892 115-417 (423)
234 KOG0647 mRNA export protein (c 99.0 4.5E-08 9.7E-13 94.8 19.7 237 591-842 31-283 (347)
235 KOG0308 Conserved WD40 repeat- 99.0 9.7E-09 2.1E-13 109.1 16.2 267 557-840 37-327 (735)
236 COG4993 Gcd Glucose dehydrogen 99.0 7.1E-08 1.5E-12 102.6 21.9 95 575-671 182-302 (773)
237 KOG0306 WD40-repeat-containing 99.0 4.6E-07 1E-11 98.2 28.0 144 555-700 75-218 (888)
238 KOG0308 Conserved WD40 repeat- 98.9 8.7E-08 1.9E-12 102.1 20.1 279 557-841 85-394 (735)
239 KOG2055 WD40 repeat protein [G 98.9 1.4E-07 3.1E-12 96.5 20.6 184 557-743 225-415 (514)
240 COG3292 Predicted periplasmic 98.9 2.9E-08 6.3E-13 104.6 15.6 267 593-897 169-450 (671)
241 KOG0305 Anaphase promoting com 98.9 1.6E-07 3.6E-12 100.7 21.7 267 557-841 188-462 (484)
242 KOG1273 WD40 repeat protein [G 98.9 2.7E-07 5.9E-12 89.8 20.8 194 591-787 27-226 (405)
243 KOG1273 WD40 repeat protein [G 98.9 5E-07 1.1E-11 88.0 22.5 238 555-796 33-289 (405)
244 KOG0292 Vesicle coat complex C 98.9 1.5E-07 3.3E-12 103.6 20.7 237 592-842 14-282 (1202)
245 KOG0263 Transcription initiati 98.9 5.9E-08 1.3E-12 106.0 17.4 216 569-788 433-650 (707)
246 KOG0263 Transcription initiati 98.9 5.3E-08 1.2E-12 106.4 16.0 188 554-743 460-647 (707)
247 KOG0306 WD40-repeat-containing 98.8 6.5E-07 1.4E-11 97.1 23.2 257 566-841 393-665 (888)
248 KOG0268 Sof1-like rRNA process 98.8 5E-08 1.1E-12 96.7 13.7 260 558-840 80-345 (433)
249 TIGR02658 TTQ_MADH_Hv methylam 98.8 6.4E-06 1.4E-10 86.5 30.1 276 598-898 11-335 (352)
250 KOG0305 Anaphase promoting com 98.8 5.8E-07 1.3E-11 96.6 22.6 265 601-894 190-462 (484)
251 KOG2055 WD40 repeat protein [G 98.8 5.5E-07 1.2E-11 92.3 20.8 195 591-788 217-418 (514)
252 PF02239 Cytochrom_D1: Cytochr 98.8 4.7E-06 1E-10 89.7 28.8 287 535-842 28-349 (369)
253 KOG0283 WD40 repeat-containing 98.8 2.8E-07 6.2E-12 101.7 19.2 182 641-839 380-575 (712)
254 KOG0270 WD40 repeat-containing 98.8 3.9E-07 8.4E-12 93.1 18.5 231 556-790 191-452 (463)
255 KOG0643 Translation initiation 98.8 2.3E-06 4.9E-11 81.7 22.3 219 586-807 9-240 (327)
256 KOG0289 mRNA splicing factor [ 98.8 1.3E-06 2.8E-11 88.9 21.8 232 557-795 231-468 (506)
257 KOG0270 WD40 repeat-containing 98.7 3E-07 6.6E-12 93.8 16.2 230 598-842 191-451 (463)
258 KOG1407 WD40 repeat protein [F 98.7 3.5E-06 7.7E-11 80.2 21.8 245 556-809 31-283 (313)
259 KOG0284 Polyadenylation factor 98.7 1.4E-07 3.1E-12 94.9 13.1 235 592-840 101-337 (464)
260 KOG0283 WD40 repeat-containing 98.7 5.3E-07 1.1E-11 99.6 18.0 184 556-743 379-574 (712)
261 KOG1407 WD40 repeat protein [F 98.7 2.4E-06 5.2E-11 81.4 19.9 202 557-762 77-279 (313)
262 KOG1188 WD40 repeat protein [G 98.7 9.8E-07 2.1E-11 87.2 17.8 187 600-791 41-246 (376)
263 KOG0645 WD40 repeat protein [G 98.7 4.4E-05 9.5E-10 73.4 28.1 262 559-840 29-311 (312)
264 PF06433 Me-amine-dh_H: Methyl 98.7 8.8E-05 1.9E-09 75.9 31.6 259 567-842 17-322 (342)
265 KOG0289 mRNA splicing factor [ 98.7 1E-06 2.3E-11 89.6 17.6 227 641-895 231-464 (506)
266 KOG0288 WD40 repeat protein Ti 98.7 1.6E-07 3.6E-12 94.7 11.7 230 594-842 182-419 (459)
267 KOG0772 Uncharacterized conser 98.7 2.9E-06 6.3E-11 88.2 20.2 283 583-890 163-484 (641)
268 KOG0772 Uncharacterized conser 98.6 5.1E-06 1.1E-10 86.4 21.9 275 553-839 175-486 (641)
269 KOG4328 WD40 protein [Function 98.6 2.5E-06 5.4E-11 87.6 19.4 273 558-839 201-494 (498)
270 KOG0277 Peroxisomal targeting 98.6 2.7E-06 5.9E-11 80.6 18.0 274 544-839 13-308 (311)
271 KOG1274 WD40 repeat protein [G 98.6 8.1E-06 1.8E-10 91.1 23.5 228 553-788 21-263 (933)
272 PRK11028 6-phosphogluconolacto 98.6 8E-05 1.7E-09 80.3 31.5 265 559-840 3-304 (330)
273 KOG2110 Uncharacterized conser 98.6 4.8E-05 1E-09 76.5 25.9 224 556-788 16-249 (391)
274 PF00550 PP-binding: Phosphopa 98.6 1E-07 2.3E-12 75.0 5.9 59 363-421 1-67 (67)
275 KOG1274 WD40 repeat protein [G 98.6 6E-06 1.3E-10 92.1 21.0 234 590-841 16-263 (933)
276 KOG0649 WD40 repeat protein [G 98.6 1.8E-05 3.8E-10 74.7 20.8 190 557-753 72-282 (325)
277 KOG0649 WD40 repeat protein [G 98.5 1.1E-05 2.4E-10 76.1 19.0 167 531-701 95-274 (325)
278 KOG1538 Uncharacterized conser 98.5 5.2E-06 1.1E-10 88.8 18.6 280 580-895 6-295 (1081)
279 KOG0645 WD40 repeat protein [G 98.5 0.00022 4.8E-09 68.8 27.4 266 599-893 27-311 (312)
280 PF08450 SGL: SMP-30/Gluconola 98.5 0.00011 2.4E-09 75.4 28.2 214 557-777 11-245 (246)
281 KOG0268 Sof1-like rRNA process 98.5 2.7E-06 5.8E-11 84.7 14.6 258 601-893 81-345 (433)
282 KOG1408 WD40 repeat protein [F 98.5 1.8E-05 4E-10 85.5 21.3 320 556-897 269-675 (1080)
283 KOG1408 WD40 repeat protein [F 98.5 2.6E-05 5.6E-10 84.4 22.3 309 557-893 336-713 (1080)
284 KOG2321 WD40 repeat protein [G 98.5 2.4E-05 5.3E-10 82.7 21.4 272 550-839 56-342 (703)
285 KOG4283 Transcription-coupled 98.5 2.2E-05 4.7E-10 76.1 19.3 270 556-839 55-364 (397)
286 KOG4328 WD40 protein [Function 98.4 4.5E-05 9.8E-10 78.6 21.8 240 592-842 191-452 (498)
287 PRK11028 6-phosphogluconolacto 98.4 0.00039 8.4E-09 75.0 30.3 273 601-897 3-310 (330)
288 KOG1188 WD40 repeat protein [G 98.4 3.7E-05 8E-10 76.4 19.1 190 558-748 41-246 (376)
289 KOG2321 WD40 repeat protein [G 98.4 5.2E-05 1.1E-09 80.3 20.7 235 592-842 56-304 (703)
290 COG4946 Uncharacterized protei 98.3 0.00056 1.2E-08 71.0 27.0 303 557-897 50-435 (668)
291 PF10282 Lactonase: Lactonase, 98.3 0.00088 1.9E-08 72.4 30.3 282 601-898 1-329 (345)
292 PF06433 Me-amine-dh_H: Methyl 98.3 0.00066 1.4E-08 69.6 27.1 239 554-796 44-329 (342)
293 KOG4378 Nuclear protein COP1 [ 98.3 3.1E-05 6.8E-10 80.3 17.6 187 641-842 91-282 (673)
294 PRK02889 tolB translocation pr 98.3 0.00045 9.7E-09 77.0 27.9 221 567-797 176-412 (427)
295 PRK05137 tolB translocation pr 98.3 0.00042 9.1E-09 77.7 27.8 215 568-791 183-416 (435)
296 PF08450 SGL: SMP-30/Gluconola 98.3 0.00056 1.2E-08 70.1 26.1 195 592-799 4-224 (246)
297 PF10282 Lactonase: Lactonase, 98.2 0.0027 5.9E-08 68.6 32.0 271 559-840 1-322 (345)
298 KOG0650 WD40 repeat nucleolar 98.2 0.00012 2.7E-09 77.9 20.3 184 556-743 411-635 (733)
299 KOG0640 mRNA cleavage stimulat 98.2 9.7E-05 2.1E-09 72.2 18.1 270 555-840 122-426 (430)
300 KOG0277 Peroxisomal targeting 98.2 4.7E-05 1E-09 72.5 15.4 229 556-786 72-308 (311)
301 KOG0640 mRNA cleavage stimulat 98.2 0.00012 2.6E-09 71.7 18.5 238 592-842 117-385 (430)
302 KOG0321 WD40 repeat-containing 98.2 0.00012 2.5E-09 78.8 20.1 275 556-844 63-395 (720)
303 KOG1240 Protein kinase contain 98.2 0.0001 2.2E-09 85.1 20.2 246 592-841 1053-1335(1431)
304 KOG3628 Predicted AMP-binding 98.2 4.2E-05 9.1E-10 87.5 17.0 329 3-344 303-703 (1363)
305 KOG2919 Guanine nucleotide-bin 98.2 0.00045 9.7E-09 68.3 21.6 185 600-790 124-331 (406)
306 COG3386 Gluconolactonase [Carb 98.2 0.00072 1.6E-08 70.3 24.5 215 557-777 37-275 (307)
307 KOG2919 Guanine nucleotide-bin 98.1 0.00015 3.2E-09 71.6 16.6 188 558-747 123-331 (406)
308 PRK03629 tolB translocation pr 98.1 0.0021 4.5E-08 71.7 28.5 218 568-795 180-413 (429)
309 PRK04922 tolB translocation pr 98.1 0.00097 2.1E-08 74.6 25.1 218 568-795 185-418 (433)
310 KOG0642 Cell-cycle nuclear pro 98.1 4E-05 8.8E-10 81.1 12.6 260 532-840 279-561 (577)
311 KOG3881 Uncharacterized conser 98.1 0.00043 9.4E-09 70.3 19.3 197 599-799 115-332 (412)
312 PRK01742 tolB translocation pr 98.1 0.0016 3.4E-08 72.8 26.4 219 567-796 184-412 (429)
313 TIGR02800 propeller_TolB tol-p 98.1 0.0024 5.2E-08 71.5 27.8 220 567-796 170-405 (417)
314 KOG1538 Uncharacterized conser 98.0 0.00024 5.3E-09 76.5 17.8 276 535-839 5-292 (1081)
315 KOG0650 WD40 repeat nucleolar 98.0 0.00026 5.5E-09 75.6 17.8 261 592-890 405-677 (733)
316 KOG4283 Transcription-coupled 98.0 0.0004 8.8E-09 67.6 17.4 226 556-786 113-364 (397)
317 KOG0321 WD40 repeat-containing 98.0 0.00044 9.6E-09 74.5 19.4 235 600-842 65-349 (720)
318 KOG3881 Uncharacterized conser 98.0 0.00022 4.7E-09 72.4 16.2 191 556-750 114-326 (412)
319 KOG1587 Cytoplasmic dynein int 98.0 0.00079 1.7E-08 75.1 22.3 261 568-841 223-517 (555)
320 COG2319 FOG: WD40 repeat [Gene 98.0 0.017 3.7E-07 64.2 34.1 263 563-842 130-402 (466)
321 PRK04792 tolB translocation pr 98.0 0.0048 1E-07 69.1 28.7 219 568-796 199-433 (448)
322 KOG0973 Histone transcription 98.0 0.0012 2.7E-08 75.8 23.6 241 591-846 73-361 (942)
323 PRK02889 tolB translocation pr 98.0 0.0016 3.4E-08 72.7 24.2 180 567-753 220-411 (427)
324 PRK04922 tolB translocation pr 98.0 0.0015 3.3E-08 73.0 24.1 179 567-752 228-418 (433)
325 KOG1034 Transcriptional repres 97.9 0.0022 4.7E-08 63.8 21.1 103 600-702 106-212 (385)
326 KOG1272 WD40-repeat-containing 97.9 4.1E-05 8.8E-10 79.0 9.7 193 556-754 140-333 (545)
327 KOG4378 Nuclear protein COP1 [ 97.9 0.0002 4.4E-09 74.5 14.5 184 557-743 91-278 (673)
328 KOG0300 WD40 repeat-containing 97.9 0.0012 2.6E-08 64.9 18.7 263 562-840 165-476 (481)
329 PRK00178 tolB translocation pr 97.9 0.007 1.5E-07 67.9 28.3 211 568-787 180-406 (430)
330 COG4257 Vgb Streptogramin lyas 97.9 0.0034 7.3E-08 61.1 21.3 226 594-841 68-306 (353)
331 PRK03629 tolB translocation pr 97.9 0.003 6.4E-08 70.4 24.6 180 566-752 222-413 (429)
332 PRK04792 tolB translocation pr 97.9 0.0031 6.6E-08 70.7 24.6 180 567-753 242-433 (448)
333 KOG1272 WD40-repeat-containing 97.9 4.7E-05 1E-09 78.6 9.1 186 638-841 138-324 (545)
334 KOG1240 Protein kinase contain 97.9 0.0013 2.9E-08 76.3 21.1 234 556-791 1060-1338(1431)
335 KOG0300 WD40 repeat-containing 97.9 0.0012 2.5E-08 65.0 17.8 263 606-895 167-478 (481)
336 KOG1332 Vesicle coat complex C 97.9 0.0018 4E-08 61.6 18.1 233 593-841 17-287 (299)
337 PF14727 PHTB1_N: PTHB1 N-term 97.9 0.0091 2E-07 64.5 26.1 293 535-842 8-362 (418)
338 COG4257 Vgb Streptogramin lyas 97.8 0.0049 1.1E-07 60.1 21.1 228 554-791 69-309 (353)
339 COG2319 FOG: WD40 repeat [Gene 97.8 0.028 6E-07 62.5 31.8 267 556-841 166-443 (466)
340 COG4946 Uncharacterized protei 97.8 0.045 9.7E-07 57.4 29.1 190 632-844 228-435 (668)
341 PRK05137 tolB translocation pr 97.8 0.0073 1.6E-07 67.7 26.2 175 610-791 183-370 (435)
342 KOG0269 WD40 repeat-containing 97.8 0.00018 4E-09 79.1 12.0 147 556-702 99-251 (839)
343 TIGR02800 propeller_TolB tol-p 97.8 0.0061 1.3E-07 68.2 24.9 180 567-753 214-405 (417)
344 KOG1587 Cytoplasmic dynein int 97.7 0.0037 8.1E-08 69.9 21.6 260 610-893 223-516 (555)
345 KOG4547 WD40 repeat-containing 97.7 0.0052 1.1E-07 66.2 21.2 162 559-724 7-193 (541)
346 PRK00178 tolB translocation pr 97.7 0.0078 1.7E-07 67.5 24.4 174 567-747 223-408 (430)
347 PF13570 PQQ_3: PQQ-like domai 97.7 6.4E-05 1.4E-09 51.6 4.4 39 856-894 2-40 (40)
348 PF14727 PHTB1_N: PTHB1 N-term 97.7 0.045 9.7E-07 59.3 28.1 182 683-890 145-357 (418)
349 PRK01742 tolB translocation pr 97.7 0.0065 1.4E-07 67.9 22.9 208 608-839 183-400 (429)
350 PLN02919 haloacid dehalogenase 97.7 0.04 8.6E-07 68.1 31.3 231 556-791 578-892 (1057)
351 PF01011 PQQ: PQQ enzyme repea 97.7 8.1E-05 1.8E-09 50.2 4.5 37 600-636 1-37 (38)
352 PF13570 PQQ_3: PQQ-like domai 97.7 6.4E-05 1.4E-09 51.6 4.1 39 534-576 2-40 (40)
353 KOG0973 Histone transcription 97.7 0.007 1.5E-07 69.8 22.4 108 553-660 77-202 (942)
354 COG3386 Gluconolactonase [Carb 97.6 0.018 3.9E-07 60.0 23.4 205 592-806 29-261 (307)
355 KOG1332 Vesicle coat complex C 97.6 0.0099 2.1E-07 56.8 18.9 230 556-794 22-292 (299)
356 KOG1963 WD40 repeat protein [G 97.6 0.064 1.4E-06 60.8 28.1 184 560-753 174-384 (792)
357 PF03321 GH3: GH3 auxin-respon 97.6 0.0001 2.3E-09 83.5 6.8 88 220-311 371-467 (528)
358 KOG1963 WD40 repeat protein [G 97.6 0.036 7.8E-07 62.8 26.1 265 554-841 25-323 (792)
359 PRK01029 tolB translocation pr 97.5 0.055 1.2E-06 60.2 27.2 221 567-792 165-408 (428)
360 PF01011 PQQ: PQQ enzyme repea 97.5 0.00025 5.4E-09 47.9 5.3 37 642-678 1-37 (38)
361 KOG0307 Vesicle coat complex C 97.5 0.00042 9.1E-09 79.9 9.6 229 558-790 81-330 (1049)
362 PRK04043 tolB translocation pr 97.5 0.14 3E-06 56.6 29.2 173 567-748 169-361 (419)
363 PF14583 Pectate_lyase22: Olig 97.5 0.19 4.2E-06 53.0 28.1 227 556-792 47-333 (386)
364 KOG0303 Actin-binding protein 97.5 0.011 2.4E-07 60.4 18.2 185 556-743 93-292 (472)
365 PLN02919 haloacid dehalogenase 97.5 0.095 2.1E-06 64.9 30.2 247 593-842 573-890 (1057)
366 KOG0267 Microtubule severing p 97.4 0.0003 6.5E-09 76.8 7.3 156 553-710 78-233 (825)
367 KOG2096 WD40 repeat protein [G 97.4 0.025 5.4E-07 56.2 19.2 278 590-891 89-400 (420)
368 KOG2111 Uncharacterized conser 97.4 0.13 2.8E-06 51.5 24.1 277 593-892 11-321 (346)
369 KOG0641 WD40 repeat protein [G 97.4 0.029 6.3E-07 52.7 18.6 190 557-749 101-307 (350)
370 PF14535 AMP-binding_C_2: AMP- 97.4 0.0011 2.4E-08 56.0 8.7 87 248-336 1-91 (96)
371 KOG2110 Uncharacterized conser 97.3 0.04 8.6E-07 56.1 20.5 170 568-743 69-246 (391)
372 KOG0269 WD40 repeat-containing 97.3 0.0058 1.3E-07 67.8 15.7 187 554-743 49-248 (839)
373 PRK04043 tolB translocation pr 97.3 0.091 2E-06 58.0 25.2 181 560-749 203-404 (419)
374 KOG2096 WD40 repeat protein [G 97.3 0.054 1.2E-06 54.0 20.2 271 553-838 94-400 (420)
375 COG2706 3-carboxymuconate cycl 97.3 0.27 6E-06 50.4 26.8 237 553-792 47-328 (346)
376 PF05096 Glu_cyclase_2: Glutam 97.2 0.041 8.9E-07 54.8 19.2 171 621-798 35-214 (264)
377 PF14583 Pectate_lyase22: Olig 97.2 0.096 2.1E-06 55.3 22.7 99 572-670 15-121 (386)
378 KOG0322 G-protein beta subunit 97.2 0.0074 1.6E-07 58.3 12.9 140 644-785 168-321 (323)
379 KOG1524 WD40 repeat-containing 97.2 0.012 2.6E-07 62.5 15.5 147 600-753 76-224 (737)
380 KOG0302 Ribosome Assembly prot 97.2 0.02 4.4E-07 58.2 16.5 106 768-895 269-380 (440)
381 KOG1034 Transcriptional repres 97.2 0.011 2.3E-07 59.1 14.1 227 643-893 107-383 (385)
382 KOG1524 WD40 repeat-containing 97.2 0.021 4.5E-07 60.7 16.9 169 557-735 75-246 (737)
383 PF04443 LuxE: Acyl-protein sy 97.2 0.0063 1.4E-07 65.2 13.8 156 48-250 175-357 (365)
384 PF05096 Glu_cyclase_2: Glutam 97.2 0.11 2.4E-06 51.8 21.2 151 556-713 54-213 (264)
385 COG5276 Uncharacterized conser 97.1 0.2 4.4E-06 49.7 22.3 181 641-842 96-287 (370)
386 COG3391 Uncharacterized conser 97.1 0.48 1E-05 51.8 28.3 225 568-799 54-295 (381)
387 CHL00124 acpP acyl carrier pro 97.1 0.0013 2.7E-08 53.9 6.1 67 359-425 4-79 (82)
388 smart00823 PKS_PP Phosphopante 97.1 0.0013 2.9E-08 54.3 6.5 65 360-424 12-85 (86)
389 PRK00982 acpP acyl carrier pro 97.1 0.0013 2.9E-08 53.2 6.2 65 360-424 3-76 (78)
390 KOG0264 Nucleosome remodeling 97.1 0.026 5.7E-07 58.9 16.7 200 670-893 124-347 (422)
391 KOG0267 Microtubule severing p 97.1 0.0007 1.5E-08 74.1 5.6 165 583-749 66-231 (825)
392 PF14269 Arylsulfotran_2: Aryl 97.1 0.086 1.9E-06 55.0 20.9 146 607-753 94-297 (299)
393 PRK01029 tolB translocation pr 97.1 0.2 4.3E-06 55.8 25.1 181 609-792 165-364 (428)
394 KOG0642 Cell-cycle nuclear pro 97.1 0.0041 8.9E-08 66.5 10.9 209 526-743 327-559 (577)
395 KOG0303 Actin-binding protein 97.1 0.016 3.6E-07 59.2 14.6 183 641-842 94-296 (472)
396 KOG3621 WD40 repeat-containing 97.1 0.031 6.7E-07 61.8 17.8 105 556-660 44-155 (726)
397 KOG2114 Vacuolar assembly/sort 97.1 0.031 6.7E-07 63.2 18.0 204 593-802 29-258 (933)
398 KOG1517 Guanine nucleotide bin 97.0 0.15 3.3E-06 59.2 23.0 291 554-897 1073-1385(1387)
399 KOG0641 WD40 repeat protein [G 97.0 0.11 2.5E-06 48.9 18.3 136 565-701 161-303 (350)
400 KOG0307 Vesicle coat complex C 97.0 0.0062 1.4E-07 70.7 12.2 227 600-842 81-329 (1049)
401 COG2706 3-carboxymuconate cycl 96.9 0.61 1.3E-05 47.9 27.5 282 601-899 4-329 (346)
402 PRK09184 acyl carrier protein; 96.9 0.0028 6E-08 52.1 6.5 67 359-425 5-87 (89)
403 KOG4547 WD40 repeat-containing 96.9 0.03 6.5E-07 60.6 15.6 120 557-678 70-191 (541)
404 PF03178 CPSF_A: CPSF A subuni 96.9 0.52 1.1E-05 50.4 25.5 213 568-786 3-264 (321)
405 COG3391 Uncharacterized conser 96.9 0.34 7.4E-06 53.0 24.3 195 555-753 83-292 (381)
406 KOG0280 Uncharacterized conser 96.9 0.013 2.8E-07 57.7 11.4 146 557-702 133-285 (339)
407 KOG0302 Ribosome Assembly prot 96.8 0.015 3.2E-07 59.2 12.1 150 544-702 216-379 (440)
408 smart00564 PQQ beta-propeller 96.8 0.0023 5.1E-08 41.6 4.4 28 556-583 5-32 (33)
409 KOG0264 Nucleosome remodeling 96.8 0.18 3.9E-06 52.9 19.6 143 600-743 191-345 (422)
410 KOG2103 Uncharacterized conser 96.7 0.04 8.6E-07 62.0 15.2 119 537-669 28-147 (910)
411 KOG1445 Tumor-specific antigen 96.7 0.012 2.6E-07 63.6 10.8 188 556-743 639-842 (1012)
412 PRK12449 acyl carrier protein; 96.7 0.0044 9.5E-08 50.4 6.1 66 359-424 4-78 (80)
413 KOG3621 WD40 repeat-containing 96.7 0.066 1.4E-06 59.4 16.5 109 594-702 40-155 (726)
414 COG0823 TolB Periplasmic compo 96.7 0.37 8E-06 53.0 22.6 158 592-755 197-368 (425)
415 KOG1517 Guanine nucleotide bin 96.7 0.074 1.6E-06 61.6 17.2 205 641-894 1076-1288(1387)
416 TIGR00517 acyl_carrier acyl ca 96.6 0.0054 1.2E-07 49.4 6.2 66 359-424 2-76 (77)
417 KOG1645 RING-finger-containing 96.6 0.19 4E-06 52.1 18.1 69 592-660 198-267 (463)
418 PRK05883 acyl carrier protein; 96.6 0.0076 1.6E-07 49.9 6.8 70 356-425 10-88 (91)
419 PF00780 CNH: CNH domain; Int 96.6 0.77 1.7E-05 47.8 23.9 223 556-798 6-266 (275)
420 PF05935 Arylsulfotrans: Aryls 96.6 0.1 2.2E-06 58.8 18.0 142 566-714 127-312 (477)
421 KOG4227 WD40 repeat protein [G 96.6 0.16 3.4E-06 52.0 17.1 150 592-743 61-223 (609)
422 PF05935 Arylsulfotrans: Aryls 96.6 0.2 4.3E-06 56.5 20.3 145 649-799 126-313 (477)
423 KOG2111 Uncharacterized conser 96.6 0.91 2E-05 45.8 21.9 171 567-743 75-254 (346)
424 COG3433 Aryl carrier domain [S 96.6 0.006 1.3E-07 45.9 5.3 50 375-424 15-69 (74)
425 PHA02713 hypothetical protein; 96.5 0.17 3.8E-06 58.2 19.4 210 568-794 273-538 (557)
426 smart00564 PQQ beta-propeller 96.5 0.0049 1.1E-07 40.0 4.0 28 768-795 5-32 (33)
427 PRK05828 acyl carrier protein; 96.4 0.0098 2.1E-07 48.2 6.4 67 359-425 4-79 (84)
428 PRK07081 acyl carrier protein; 96.4 0.0079 1.7E-07 49.0 5.7 64 363-426 3-78 (83)
429 KOG0644 Uncharacterized conser 96.4 0.019 4.1E-07 64.4 9.9 103 553-659 198-300 (1113)
430 PRK07117 acyl carrier protein; 96.3 0.012 2.7E-07 47.1 6.3 66 359-424 4-78 (79)
431 PHA02713 hypothetical protein; 96.3 0.28 6.1E-06 56.6 19.5 131 652-795 321-495 (557)
432 PF14269 Arylsulfotran_2: Aryl 96.2 0.27 5.9E-06 51.3 17.4 145 566-713 95-298 (299)
433 KOG0771 Prolactin regulatory e 96.2 0.09 2E-06 54.6 13.3 160 592-753 149-320 (398)
434 KOG2445 Nuclear pore complex c 96.2 1.6 3.5E-05 43.8 20.9 199 631-841 15-257 (361)
435 KOG0280 Uncharacterized conser 96.1 0.091 2E-06 52.0 12.2 109 594-702 128-242 (339)
436 COG3823 Glutamine cyclotransfe 96.1 0.27 5.8E-06 46.4 14.6 152 557-714 55-215 (262)
437 PLN02249 indole-3-acetic acid- 96.1 0.13 2.9E-06 58.8 15.5 43 220-262 410-456 (597)
438 KOG1445 Tumor-specific antigen 96.1 0.061 1.3E-06 58.4 11.8 105 598-702 639-751 (1012)
439 KOG2695 WD40 repeat protein [G 96.1 0.073 1.6E-06 53.7 11.6 146 608-755 233-387 (425)
440 KOG1009 Chromatin assembly com 96.1 2.2 4.7E-05 44.6 22.1 117 547-663 67-199 (434)
441 PF03178 CPSF_A: CPSF A subuni 96.0 1.1 2.3E-05 48.0 21.7 219 610-839 3-264 (321)
442 KOG4714 Nucleoporin [Nuclear s 96.0 0.26 5.5E-06 48.0 14.5 113 768-891 191-316 (319)
443 PRK05350 acyl carrier protein; 96.0 0.02 4.3E-07 46.7 6.2 67 359-425 5-80 (82)
444 KOG0771 Prolactin regulatory e 96.0 0.15 3.2E-06 53.1 13.6 148 553-702 152-312 (398)
445 PF00780 CNH: CNH domain; Int 95.9 2.6 5.7E-05 43.8 24.5 146 596-749 4-170 (275)
446 KOG2103 Uncharacterized conser 95.9 0.17 3.6E-06 57.3 14.4 122 577-714 24-148 (910)
447 KOG4227 WD40 repeat protein [G 95.9 0.62 1.3E-05 47.9 17.0 156 543-702 57-226 (609)
448 KOG2445 Nuclear pore complex c 95.9 1.4 3.1E-05 44.1 19.1 120 591-711 17-154 (361)
449 KOG1897 Damage-specific DNA bi 95.8 5.6 0.00012 46.7 26.6 70 589-658 259-336 (1096)
450 KOG1912 WD40 repeat protein [G 95.8 1.4 3E-05 49.9 20.6 184 557-743 79-302 (1062)
451 PF07433 DUF1513: Protein of u 95.7 2.9 6.4E-05 43.0 24.5 224 557-790 17-288 (305)
452 KOG0974 WD-repeat protein WDR6 95.7 0.52 1.1E-05 54.9 17.7 182 556-743 98-286 (967)
453 COG3823 Glutamine cyclotransfe 95.7 0.87 1.9E-05 43.1 15.9 150 642-798 56-215 (262)
454 KOG1027 Serine/threonine prote 95.7 0.069 1.5E-06 60.8 10.6 189 599-804 27-218 (903)
455 KOG3914 WD repeat protein WDR4 95.7 0.21 4.5E-06 51.8 13.0 155 553-712 70-232 (390)
456 PRK07639 acyl carrier protein; 95.6 0.044 9.4E-07 44.9 6.7 67 359-425 4-82 (86)
457 KOG1645 RING-finger-containing 95.6 0.52 1.1E-05 48.9 15.4 66 640-705 205-270 (463)
458 PLN02620 indole-3-acetic acid- 95.5 0.4 8.7E-06 54.4 16.1 43 220-262 423-469 (612)
459 KOG0322 G-protein beta subunit 95.5 0.064 1.4E-06 52.1 8.4 141 560-700 168-322 (323)
460 KOG1009 Chromatin assembly com 95.5 3.8 8.1E-05 42.9 22.2 115 558-672 27-166 (434)
461 PF14870 PSII_BNR: Photosynthe 95.5 3 6.5E-05 43.4 21.2 256 592-890 21-301 (302)
462 COG0236 AcpP Acyl carrier prot 95.5 0.036 7.7E-07 44.9 5.7 65 360-424 5-78 (80)
463 PF14783 BBS2_Mid: Ciliary BBS 95.5 0.24 5.2E-06 42.1 10.6 89 769-887 15-108 (111)
464 PRK05087 D-alanine--poly(phosp 95.4 0.043 9.4E-07 43.8 5.7 63 361-423 3-76 (78)
465 KOG4441 Proteins containing BT 95.3 1.2 2.5E-05 51.4 19.4 170 610-795 302-505 (571)
466 KOG4441 Proteins containing BT 95.3 1.4 2.9E-05 50.9 19.9 212 567-796 301-553 (571)
467 PF08662 eIF2A: Eukaryotic tra 95.3 1.9 4.1E-05 42.0 18.0 124 601-735 33-163 (194)
468 KOG1912 WD40 repeat protein [G 95.2 1.5 3.2E-05 49.6 18.5 143 556-699 25-184 (1062)
469 PRK02888 nitrous-oxide reducta 95.1 7.5 0.00016 44.2 23.9 221 556-788 140-405 (635)
470 PF07433 DUF1513: Protein of u 95.1 3.2 6.9E-05 42.8 19.3 133 644-777 20-181 (305)
471 KOG1275 PAB-dependent poly(A) 95.0 0.4 8.6E-06 55.0 13.8 282 533-839 45-341 (1118)
472 KOG1409 Uncharacterized conser 95.0 2.5 5.4E-05 43.2 17.8 225 556-789 35-272 (404)
473 KOG1275 PAB-dependent poly(A) 94.8 0.73 1.6E-05 53.0 15.1 180 556-743 146-340 (1118)
474 PF14783 BBS2_Mid: Ciliary BBS 94.8 1.2 2.7E-05 37.9 13.0 93 555-653 13-108 (111)
475 PTZ00171 acyl carrier protein; 94.8 0.068 1.5E-06 48.6 5.9 68 358-425 68-144 (148)
476 PHA03098 kelch-like protein; P 94.7 1.4 3E-05 51.0 18.3 169 610-795 312-517 (534)
477 PF06977 SdiA-regulated: SdiA- 94.7 5.5 0.00012 40.2 20.7 193 590-784 24-247 (248)
478 COG0823 TolB Periplasmic compo 94.6 1.5 3.3E-05 48.2 16.9 133 567-702 218-359 (425)
479 PRK02888 nitrous-oxide reducta 94.6 10 0.00022 43.2 23.1 129 692-842 214-353 (635)
480 PF08662 eIF2A: Eukaryotic tra 94.5 1.9 4.1E-05 42.0 15.9 128 556-691 30-163 (194)
481 PF04841 Vps16_N: Vps16, N-ter 94.5 9.4 0.0002 42.2 27.2 185 547-743 40-244 (410)
482 KOG1334 WD40 repeat protein [G 94.4 0.49 1.1E-05 50.3 11.9 278 552-840 149-466 (559)
483 PF08553 VID27: VID27 cytoplas 94.4 0.65 1.4E-05 54.4 14.0 131 565-701 502-647 (794)
484 PRK08172 putative acyl carrier 94.4 0.12 2.6E-06 41.9 5.9 66 360-425 4-78 (82)
485 PHA03098 kelch-like protein; P 94.3 1.9 4.2E-05 49.8 18.2 130 568-712 312-471 (534)
486 KOG2114 Vacuolar assembly/sort 94.2 4.1 9E-05 46.9 19.0 196 554-755 32-254 (933)
487 KOG1063 RNA polymerase II elon 94.0 13 0.00028 41.9 25.1 62 601-662 71-132 (764)
488 KOG3914 WD repeat protein WDR4 93.9 0.84 1.8E-05 47.5 12.1 80 672-753 152-232 (390)
489 KOG1027 Serine/threonine prote 93.9 0.29 6.3E-06 56.0 9.6 186 557-759 27-216 (903)
490 PF08553 VID27: VID27 cytoplas 93.8 0.95 2E-05 53.1 13.8 142 641-786 493-646 (794)
491 KOG4499 Ca2+-binding protein R 93.8 7.1 0.00015 37.9 19.2 41 766-806 219-260 (310)
492 KOG2695 WD40 repeat protein [G 93.7 0.72 1.6E-05 46.9 10.9 147 562-713 230-386 (425)
493 KOG0644 Uncharacterized conser 93.6 0.23 5E-06 56.2 8.1 106 592-701 195-300 (1113)
494 PLN02247 indole-3-acetic acid- 93.6 0.52 1.1E-05 53.7 11.1 44 220-263 417-464 (606)
495 KOG1064 RAVE (regulator of V-A 93.4 0.62 1.3E-05 57.6 11.7 175 601-796 2222-2407(2439)
496 PF02897 Peptidase_S9_N: Proly 93.3 16 0.00035 40.6 26.1 221 568-792 151-409 (414)
497 PLN00033 photosystem II stabil 93.2 15 0.00033 40.1 23.3 134 728-890 250-396 (398)
498 KOG2394 WD40 protein DMR-N9 [G 93.2 0.65 1.4E-05 50.1 10.2 90 591-680 294-383 (636)
499 PRK13684 Ycf48-like protein; P 93.1 14 0.00031 39.5 22.0 217 644-892 102-330 (334)
500 KOG2139 WD40 repeat protein [G 93.1 5 0.00011 41.4 15.7 178 562-743 115-309 (445)
No 1
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.5e-54 Score=595.48 Aligned_cols=400 Identities=26% Similarity=0.426 Sum_probs=344.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++.+|++||.+++++|.+|+.|+++++++ .....+|..+++.++++++|++.++|++++.++....
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~-~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~-- 3979 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVP-NAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDR-- 3979 (4334)
T ss_pred HhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcC-ccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcc--
Confidence 5689999999999999999999999999999999999985 4456789999999999999999999999998875422
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+++||.+++|||++++++.+.|.+.+|+++++|.||+||++.++++....... ......++|+|++++++
T Consensus 3980 ---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~ 4051 (4334)
T PRK05691 3980 ---QALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLAS-----TRGSYLPIGSPTDNNRL 4051 (4334)
T ss_pred ---ccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEccccc-----ccCCcCCCCCccCCCEE
Confidence 2267899999999999999999999998999999999999999888765433211 12245789999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+.. +.+..|||+|+|+++++||+++|+.|+++|+..+.. ..+.+||||||+|++++||.++|+||
T Consensus 4052 ~v~d~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~--------~~~~~~yrTGDl~~~~~dG~l~~~GR 4123 (4334)
T PRK05691 4052 YLLDEALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFG--------APGERLYRTGDLARRRSDGVLEYVGR 4123 (4334)
T ss_pred EEECCCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCC--------CCCceeeccCcceeecCCCcEEEecc
Confidence 9998765 456789999999999999999999999999886542 23579999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+|+|||++|+||+|.|||++|.++|+|.+++|+.... ..+..+++|++............++|+++|+++||.||+|..
T Consensus 4124 ~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~~-~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~ 4202 (4334)
T PRK05691 4124 IDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQEG-VNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLH 4202 (4334)
T ss_pred cCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEecC-CCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcc
Confidence 9999999999999999999999999999998876644 334578999987665444445567899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHHHHHHH
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAAAHVAH 399 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a~~l~~ 399 (900)
++.+++||+|+||||||++|+++...... ......+.+++|+.|+++|+++|+.+.|+.+|+||++|||||+||+|..
T Consensus 4203 ~~~~~~lP~t~~GKidr~~L~~~~~~~~~--~~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGg~Sl~a~~l~~ 4280 (4334)
T PRK05691 4203 WLWLDRLPLNANGKLDRKALPALDIGQLQ--SQAYLAPRNELEQTLATIWADVLKVERVGVHDNFFELGGHSLLATQIAS 4280 (4334)
T ss_pred eeecccCCCCCCCcccHhhcCCCcccccc--ccccCCCCCHHHHHHHHHHHHHhCCCcCCCCCchhhcCCcHHHHHHHHH
Confidence 99999999999999999999876322211 1122456789999999999999999999999999999999999999976
Q ss_pred Hh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 400 NL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 400 ~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
++ .+++.++|++||++.||..|...
T Consensus 4281 ~~~~~~~~~~~~~~~f~~~t~~~la~~~~~~ 4311 (4334)
T PRK05691 4281 RVQKALQRNVPLRAMFECSTVEELAEYIEGL 4311 (4334)
T ss_pred HHHHHhCCCccHHHHhcCCCHHHHHHHHhhh
Confidence 54 47889999999999999999753
No 2
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-54 Score=590.23 Aligned_cols=396 Identities=25% Similarity=0.389 Sum_probs=342.9
Q ss_pred CccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 2 QDLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 2 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
.+.++++++|++++++|++|+.++.++|.+|+.|+++++++ ....++..+++.|++++||++.++|++++.+++....
T Consensus 3270 ~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~--~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~ 3347 (3956)
T PRK12467 3270 AEAYELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRD--NDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGG 3347 (3956)
T ss_pred HHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECC--cccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccc
Confidence 35688999999999999999999999999999999999985 3347899999999999999999999999988764321
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
..+++||.+++|||++++++.+.|.+.+++++++|.||+||+++.++...+... ........++|+|+++++
T Consensus 3348 ----~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~~ 3419 (3956)
T PRK12467 3348 ----ADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGD----AVCEAPYAPIGRPVAGRS 3419 (3956)
T ss_pred ----cCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccc----cccCCCCCCCccccCCCE
Confidence 346889999999999999999999998988999999999999988776544211 111224578999999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++|+|+++ +.++.|||+|+|+++++||+++|+.|+++|+..+.. ..+.+||+|||+|++++||+|+|+|
T Consensus 3420 ~~v~d~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~--------~~g~r~yrTGDl~~~~~dG~l~~~G 3491 (3956)
T PRK12467 3420 IYVLDGQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFS--------GSGGRLYRTGDLARYRADGVIEYLG 3491 (3956)
T ss_pred EEEECCCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCC--------CCCceeeccchhheecCCCcEEEec
Confidence 99998765 456789999999999999999999999999886542 2357899999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|+|+|||++|+||+|.|||++|.++|+|.+|+|+..... .+..+++|+++..... ...++++++++++||.||+|.
T Consensus 3492 R~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~-~~~~lva~v~~~~~~~---~~~~~l~~~l~~~Lp~y~vP~ 3567 (3956)
T PRK12467 3492 RIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDGA-GGKQLVAYVVPADPQG---DWRETLRDHLAASLPDYMVPA 3567 (3956)
T ss_pred cccceEeeceEeecHHHHHHHHhhCcccceEEEEEecCC-CCcEEEEEEeCCCCCc---ccHHHHHHHHhccCChhhCCC
Confidence 999999999999999999999999999999999987543 4568999998765422 234689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHHHHHH
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAAAHVA 398 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a~~l~ 398 (900)
.|+++++||+|++|||||++|++..... ......+.+++|+.++++|+++|+++.|+.++|||++|||||.|++|.
T Consensus 3568 ~~~~l~~lP~t~~GKidR~~L~~~~~~~----~~~~~~p~~~~e~~l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~ 3643 (3956)
T PRK12467 3568 QLLVLAAMPLGPNGKVDRKALPDPDAKG----SREYVAPRSEVEQQLAAIWADVLGVEQVGVTDNFFELGGDSLLALQVL 3643 (3956)
T ss_pred eeeeeccCCCCCCCccchhhcCCCCccc----cccccCCCCHHHHHHHHHHHHHhCCCCCCCCcchhcccchHHHHHHHH
Confidence 9999999999999999999999865432 122335678899999999999999999999999999999999999998
Q ss_pred HHh------CCCchhhhcCCCHHHHHHHHHh
Q 002615 399 HNL------GIDMRLIYNFPTPSKLEIALLE 423 (900)
Q Consensus 399 ~~l------~~~~~~~~~~~t~~~l~~~l~~ 423 (900)
.++ .+++.++|++||++.||..+..
T Consensus 3644 ~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3644 SRIRQSLGLKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred HHHHHHhCCCCCHHHHHhCCCHHHHHHHHhh
Confidence 754 4788999999999999998864
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.7e-54 Score=585.70 Aligned_cols=403 Identities=28% Similarity=0.459 Sum_probs=344.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++++|++|+++++++|.+|+.|++++++++ ....+|..+++.|+++++|++.++|++++.+......
T Consensus 1752 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~-~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~- 1829 (3956)
T PRK12467 1752 EAYQLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPP-GAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ- 1829 (3956)
T ss_pred HhcCCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcCh-hhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc-
Confidence 56889999999999999999999999999999999999853 3456899999999999999999999999998864221
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++|||++++++++.|.+.+++++++|.||+||++++++.+.+.... ......+++|+|++++.+
T Consensus 1830 --~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~----~~~~~~~~iG~p~~~~~~ 1903 (3956)
T PRK12467 1830 --VEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKD----LEGRDSVPIGQPIANLST 1903 (3956)
T ss_pred --cccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccc----cccCCCCCcccccCCCEE
Confidence 13368999999999999999999999988889999999999999887765543211 112245789999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.+..|||+|+|+++++||+++|+.|+++|+..+.. ..+.+||+|||+|++++||.|+|+||
T Consensus 1904 ~vld~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~--------~~~~r~yrTGDl~~~~~dG~l~~~GR 1975 (3956)
T PRK12467 1904 YILDASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFG--------TVGSRLYRTGDLARYRADGVIEYLGR 1975 (3956)
T ss_pred EEECCCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCC--------CCCccceeccceEEECCCCCEEEecc
Confidence 9998765 346779999999999999999999999999875532 12568999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc-----hHHHHHHHHHHHHhhCCCC
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS-----SEIFLSSIKSWVSSKLPLA 314 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~-----~~~~~~~l~~~l~~~l~~~ 314 (900)
+|+|||++|+||+|.|||++|.+||+|.+|+|++.+. ..+..+++|+++...... .....++|++++++.||.|
T Consensus 1976 ~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~~-~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y 2054 (3956)
T PRK12467 1976 IDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQDG-ANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEY 2054 (3956)
T ss_pred cCceEEeCeEEechHHHHHHHHhCCCcceEEEEEecC-CCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchh
Confidence 9999999999999999999999999999999998863 345679999987654221 1123468999999999999
Q ss_pred ccCCEEEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHH
Q 002615 315 MIPNRFVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAA 394 (900)
Q Consensus 315 ~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a 394 (900)
|+|..|+.+++||+|+||||||++|++......... ...+.+++++.++++|+++|+++.|+.++|||++|||||+|
T Consensus 2055 mvP~~~~~l~~lP~t~~GKidr~~L~~~~~~~~~~~---~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a 2131 (3956)
T PRK12467 2055 MVPAHLVFLARMPLTPNGKLDRKALPAPDASELQQA---YVAPQSELEQRLAAIWQDVLGLEQVGLHDNFFELGGDSIIS 2131 (3956)
T ss_pred hCchhhhhhhcCCCCCCCCcchhhCCCCcccccccc---ccCCCCHHHHHHHHHHHHHhCCCccCCCCChhhcCCchHHH
Confidence 999999999999999999999999987654433222 23466789999999999999999999999999999999999
Q ss_pred HHHHHHh-----CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 395 AHVAHNL-----GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 395 ~~l~~~l-----~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
|+|++++ .++++++|++||++.||..+....
T Consensus 2132 ~~l~~~~~~~g~~l~~~~if~~~ti~~la~~~~~~~ 2167 (3956)
T PRK12467 2132 IQVVSRARQAGIRFTPKDLFQHQTVQSLAAVAQEGD 2167 (3956)
T ss_pred HHHHHHHHHcCCCCCHHHHhcCCCHHHHHHHHhhcc
Confidence 9998765 478999999999999999886543
No 4
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.5e-53 Score=545.62 Aligned_cols=417 Identities=22% Similarity=0.357 Sum_probs=338.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++.+|++|++++.++|.+|+.|+++++++ .....++..+++.|+++++|++.++|++++.+.....
T Consensus 449 ~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~-~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-- 525 (1389)
T TIGR03443 449 KRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPT-ADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT-- 525 (1389)
T ss_pred HhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcC-hhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc--
Confidence 4678999999999999999999999999999999999985 3345678899999999999999999999998864321
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCcccc--ccCCCCcceeeeccCCc
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSIL--EMSTLKSVPIGLPISNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~p~~~~ 160 (900)
..+++||.+++|||++++.+.+.+.+.+++++++|.||+||++++++++......... .......+++|+|++++
T Consensus 526 ---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 602 (1389)
T TIGR03443 526 ---TPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV 602 (1389)
T ss_pred ---ccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC
Confidence 2368999999999999999999999888899999999999999877765432111000 00011357899999999
Q ss_pred EEEEecCCC-----CCCCccEEEEccccccccccCCCCCCccchhccCCcccc---cC----------cCCCCCcceEec
Q 002615 161 DIVLVESDT-----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSIC---NC----------SVSCGSQTYFRT 222 (900)
Q Consensus 161 ~~~i~d~~~-----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~---~~----------~~~~~~~~~~~T 222 (900)
+++|+|+++ +.+..|||+|+|+++++||+++|+.|+++|+..+..... .. ......++||+|
T Consensus 603 ~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~T 682 (1389)
T TIGR03443 603 QLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRT 682 (1389)
T ss_pred EEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeec
Confidence 999998643 356789999999999999999999999999764321000 00 000123689999
Q ss_pred CceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc-------
Q 002615 223 GDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS------- 295 (900)
Q Consensus 223 GDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~------- 295 (900)
||+|++++||.|+|+||+|||||++|+||+|.|||++|.+||.|.+++|+...+......+++|+++......
T Consensus 683 GDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~ 762 (1389)
T TIGR03443 683 GDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSE 762 (1389)
T ss_pred CCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccc
Confidence 9999999999999999999999999999999999999999999999999887776667789999987622110
Q ss_pred ----------------hHHHHHHHHHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhccccccccccc-----cCcc
Q 002615 296 ----------------SEIFLSSIKSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFTISAQ-----HDAD 354 (900)
Q Consensus 296 ----------------~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~-----~~~~ 354 (900)
......+++++++++||.||+|..++++++||+|++|||||++|++.+....... ....
T Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~ 842 (1389)
T TIGR03443 763 VDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPDTAQLAAVAKNRSASAA 842 (1389)
T ss_pred cccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCchhhhhhhhcccccccc
Confidence 0113468999999999999999999999999999999999999986544332211 1112
Q ss_pred cccchHHHHHHHHHHhcccCC--cccccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 355 ETKASDLLQVIRKAFGHALMV--EEVLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
..+.+++++.++++|+++|+. ..++.+++||++|||||+|++|+++| .+++..+|++||++.|+.+|....
T Consensus 843 ~~~~~~~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~ 921 (1389)
T TIGR03443 843 DEEFTETEREIRDLWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLK 921 (1389)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhh
Confidence 234567899999999999986 45999999999999999999998766 378889999999999999997654
No 5
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.3e-53 Score=539.35 Aligned_cols=403 Identities=26% Similarity=0.439 Sum_probs=338.1
Q ss_pred CccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 2 QDLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 2 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
.+.|+++++|++++.+|++|+.+++++|.+|+.|+++++.+ .....+|..+++.++++++|++.++|+++..++.....
T Consensus 631 ~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~-~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~ 709 (1296)
T PRK10252 631 QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAE-PEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTP 709 (1296)
T ss_pred HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECC-hhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcc
Confidence 35689999999999999999999999999999999999985 34467899999999999999999999999998876433
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
......+++||.+++|||++++++.+.|.+.+ +++++|.||+||++..++........ ........+++|+|++++.
T Consensus 710 ~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~--~~~~~~~~~~iG~p~~~~~ 786 (1296)
T PRK10252 710 EGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEE--LAAVRGSSVPIGYPVWNTG 786 (1296)
T ss_pred ccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeeccccc--ccccCCCCCCcccccCCCE
Confidence 32222357899999999999999999998876 78999999999999877755432211 0001224678999999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++|+|+++ +.+..|||+|+|+++++||+++|+.|.++|...+.. .+.+||+|||+|++++||.++|+|
T Consensus 787 ~~i~d~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~---------~~~~~y~TGDl~~~~~~G~l~~~G 857 (1296)
T PRK10252 787 LRILDARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFA---------PGERMYRTGDVARWLDDGAVEYLG 857 (1296)
T ss_pred EEEECCCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCC---------CCCEEEecCceEEEcCCCcEEEec
Confidence 99998765 456779999999999999999999999999875432 246899999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEee------cCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHK------HQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLP 312 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~------~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~ 312 (900)
|+|++||++|+||+|.|||++|.+||.|.+++|+... ..+....+++++++...... ..++|+++++++||
T Consensus 858 R~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~---~~~~l~~~l~~~Lp 934 (1296)
T PRK10252 858 RSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPL---DTSALQAQLRERLP 934 (1296)
T ss_pred ccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCC---CHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999876542 11222468999987654322 24689999999999
Q ss_pred CCccCCEEEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchH
Q 002615 313 LAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSI 392 (900)
Q Consensus 313 ~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl 392 (900)
.||+|..++.+++||+|++|||||++|++..... ......+.+.+++.+.++|+++|+.+.++.+++||++|||||
T Consensus 935 ~~~~P~~~~~~~~lP~t~~GKidr~~L~~~~~~~----~~~~~~~~~~~e~~l~~~~~~~l~~~~~~~~~~ff~lGg~Sl 1010 (1296)
T PRK10252 935 PHMVPVVLLQLDQLPLSANGKLDRKALPLPELKA----QVPGRAPKTGTETIIAAAFSSLLGCDVVDADADFFALGGHSL 1010 (1296)
T ss_pred hhcCCcEEEEecCCCCCCCcChhHHhcCCCcccc----cccCCCCCCHHHHHHHHHHHHHhCCCCCCCCcCHHHcCCChH
Confidence 9999999999999999999999999998643211 112234567889999999999999999999999999999999
Q ss_pred HHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 393 AAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 393 ~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
+|++|..+| .+++.++|++||++.|+.+|...
T Consensus 1011 ~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 1011 LAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence 999998765 47889999999999999999754
No 6
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=5e-53 Score=583.98 Aligned_cols=392 Identities=28% Similarity=0.440 Sum_probs=340.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.|+++++|++++.+|++|+.++.++|.+|+.|++++++++ ....++..+++.+++++||++.++|++++.++....
T Consensus 689 ~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~-~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-- 765 (5163)
T PRK12316 689 QAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAP-GDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED-- 765 (5163)
T ss_pred HhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCc-cccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--
Confidence 56889999999999999999999999999999999999853 345789999999999999999999999999875422
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++|||++++++.+.|.+.+++++++|.||+||+++.++...+.. .....+++|+|++++++
T Consensus 766 --~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-------~~~~~~~iG~p~~~~~~ 836 (5163)
T PRK12316 766 --VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVE-------EGGDSVPIGRPIANLAC 836 (5163)
T ss_pred --cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEeccc-------ccCCCCCCccccCCCEE
Confidence 123689999999999999999999988888999999999999997766554321 12256789999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.+..|||+|+|+++++||+++|+.|+++|+..+.. .+++||+|||+|++++||.|+|+||
T Consensus 837 ~i~d~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~---------~~~~~y~TGDl~~~~~dG~l~~~GR 907 (5163)
T PRK12316 837 YILDANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFV---------AGERMYRTGDLARYRADGVIEYAGR 907 (5163)
T ss_pred EEECCCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCC---------CCCeeEecCccEEECCCCCEEeecc
Confidence 9998766 346789999999999999999999999999765421 2468999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+|||||++|+||+|.|||++|.+||.|.+|+|++.+ +..++|+|++.+.... ..++++++++++||.||+|..
T Consensus 908 ~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~---~~~~l~~~l~~~Lp~y~vP~~ 980 (5163)
T PRK12316 908 IDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGD---WREALKAHLAASLPEYMVPAQ 980 (5163)
T ss_pred cCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCC---CHHHHHHHHHhhCCCccCCCe
Confidence 999999999999999999999999999999999886 3478999998764322 246899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHHHHHHH
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAAAHVAH 399 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a~~l~~ 399 (900)
|+++++||+|++|||||++|++....... .....+.+++++.++.+|+++|+.+.++.++|||++|||||+||+|++
T Consensus 981 i~~v~~lP~t~~GKidr~~L~~~~~~~~~---~~~~~~~~~~e~~l~~iw~~vL~~~~i~~~~~Ff~lGgdSl~a~~l~~ 1057 (5163)
T PRK12316 981 WLALERLPLTPNGKLDRKALPAPEASVAQ---QGYVAPRNALERTLAAIWQDVLGVERVGLDDNFFELGGDSIVSIQVVS 1057 (5163)
T ss_pred EEEHhhCCCCCCCChhHHhhcCccccccc---cccCCCCCHHHHHHHHHHHHHhCCCCCCCCCChhhcCCcHHHHHHHHH
Confidence 99999999999999999999876543222 222346678999999999999999999999999999999999999987
Q ss_pred Hh-----CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 400 NL-----GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 400 ~l-----~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
++ .++++++|++||++.||.++....
T Consensus 1058 ~~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1088 (5163)
T PRK12316 1058 RARQAGIQLSPRDLFQHQTIRSLALVAKAGQ 1088 (5163)
T ss_pred HHHHhCCCCCHHHHhcCCCHHHHHHHHHhcc
Confidence 65 588999999999999999886543
No 7
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.3e-53 Score=581.85 Aligned_cols=399 Identities=24% Similarity=0.423 Sum_probs=341.9
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++++|++|+.++.++|.+|+.|+++++++. ...++..+++.++++++|++.++|++++.+.+.....
T Consensus 2180 ~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~--~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 2257 (5163)
T PRK12316 2180 ERYELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDD--ELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD 2257 (5163)
T ss_pred HhcCCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCc--ccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc
Confidence 46889999999999999999999999999999999987742 2468999999999999999999999999998754332
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
. ...+||.+++|||++++++++.|.+.+++.+++|.||+||+++.++...+.... ......+++|+|++++++
T Consensus 2258 ~---~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~----~~~~~~~~iG~p~~~~~~ 2330 (5163)
T PRK12316 2258 G---RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQD----PCGAAYVPIGRALGNRRA 2330 (5163)
T ss_pred c---CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeeccccc----ccCCCcCCcccccCCCEE
Confidence 2 235899999999999999999999988889999999999999877755432211 111134789999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.+..|||+|+|+++++||+++|+.|+++|+..+.. ..+++||+|||+|++++||.++|+||
T Consensus 2331 ~i~d~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~--------~~~~~~yrTGDl~~~~~dG~l~~~GR 2402 (5163)
T PRK12316 2331 YILDADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFS--------ASGERLYRTGDLARYRADGVVEYLGR 2402 (5163)
T ss_pred EEECCCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCC--------CCCCeeEecccEEEEcCCCcEEEecC
Confidence 9998765 456789999999999999999999999999875432 12468999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+|+|||++|+||+|.|||++|.+||+|.+++|++.++. .++.++||+++..... ...++|+++++++||.||+|..
T Consensus 2403 ~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~---~~~~~l~~~l~~~Lp~~~vP~~ 2478 (5163)
T PRK12316 2403 IDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAE---DLLAELRAWLAARLPAYMVPAH 2478 (5163)
T ss_pred CCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCCCc---cCHHHHHHHHHhhCchhcCcce
Confidence 99999999999999999999999999999999987765 5568999999876542 2346899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHHHHHHH
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAAAHVAH 399 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a~~l~~ 399 (900)
++++++||+|++|||||++|++....... .....+.+++++.++++|+++|+.+.|+.+++||++|||||.||+|+.
T Consensus 2479 ~~~l~~lP~t~~GKidR~~L~~~~~~~~~---~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~ 2555 (5163)
T PRK12316 2479 WVVLERLPLNPNGKLDRKALPKPDVSQLR---QAYVAPQEGLEQRLAAIWQAVLKVEQVGLDDHFFELGGHSLLATQVVS 2555 (5163)
T ss_pred EeeecccCCCCCCccCHhhcCCCcccccc---ccccCCCCHHHHHHHHHHHHHhCCCccCCCCchhhhcchHHHHHHHHH
Confidence 99999999999999999999876543221 122346678899999999999999999999999999999999999986
Q ss_pred Hh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 400 NL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 400 ~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
++ .+++.++|++||++.||..+....
T Consensus 2556 ~~~~~~g~~l~~~~~f~~~ti~~la~~l~~~~ 2587 (5163)
T PRK12316 2556 RVRQDLGLEVPLRILFERPTLAAFAASLESGQ 2587 (5163)
T ss_pred HHHHHhCCCcCHHHHhhCccHHHHhhhhhhhh
Confidence 54 578899999999999999886543
No 8
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.4e-52 Score=575.98 Aligned_cols=394 Identities=25% Similarity=0.424 Sum_probs=339.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++.+|++|+.++.++|.+|+.|++++++++ ....++..+++.++++++|++.++|++++.+......
T Consensus 1307 ~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~-~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~- 1384 (4334)
T PRK05691 1307 ATYALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGP-GEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA- 1384 (4334)
T ss_pred HhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCc-cccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc-
Confidence 46889999999999999999999999999999999999853 3357899999999999999999999999998754321
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+++||.+++|||++++++.+.|.+.+|+++++|.||+||+++.++...+... .....++|+|++++.+
T Consensus 1385 ---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~iG~p~~~~~~ 1454 (4334)
T PRK05691 1385 ---AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAE-------DGERSPIGRPLGNVLC 1454 (4334)
T ss_pred ---ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccc-------cCCCCcccceeCCCEE
Confidence 236899999999999999999999999999999999999999987775543211 1245689999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.+..|||+|+|+++++||+++|+.|+++|+..+.. ..+.+||+|||+|++++||.++|+||
T Consensus 1455 ~i~d~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~--------~~~~r~yrTGDl~~~~~dG~l~~~GR 1526 (4334)
T PRK05691 1455 RVLDAELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLG--------EDGARLYRTGDRARWNADGALEYLGR 1526 (4334)
T ss_pred EEECCCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCC--------CCCceEEEccceEEECCCCCEEEecc
Confidence 9998765 456779999999999999999999999999875432 12468999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+|+|||++|+||+|.|||++|.+||+|.+|+|+....... ..++++++........ .++|+++++++||.||+|..
T Consensus 1527 ~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~~~-~~lva~~~~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~ 1602 (4334)
T PRK05691 1527 LDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGAAG-AQLVGYYTGEAGQEAE---AERLKAALAAELPEYMVPAQ 1602 (4334)
T ss_pred cCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCCCC-CEEEEEEEeCCCCCCC---HHHHHHHHHHhCccccCCcE
Confidence 9999999999999999999999999999999987665433 5788998876543322 35899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccccccccccCcccccchHHHHHHHHHHhcccCCcccccCCCccccCcchHHHHHHHH
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFTISAQHDADETKASDLLQVIRKAFGHALMVEEVLHHDNFFTMGGNSIAAAHVAH 399 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~Ff~lGgdSl~a~~l~~ 399 (900)
|+.+++||+|++|||||++|++..... .....+.+++++.++++|+++|+.+.|+.++|||++|||||+||+|+.
T Consensus 1603 ~~~~~~lP~t~~GKidr~~L~~~~~~~-----~~~~~p~~~~e~~l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~ 1677 (4334)
T PRK05691 1603 LIRLDQMPLGPSGKLDRRALPEPVWQQ-----REHVEPRTELQQQIAAIWREVLGLPRVGLRDDFFALGGHSLLATQIVS 1677 (4334)
T ss_pred EEEccccCCCCCCCcChhhcCcccccc-----cccCCCCCHHHHHHHHHHHHHhCCCCCCCCCchHHhcccHHHHHHHHH
Confidence 999999999999999999998653211 122346678999999999999999999999999999999999999976
Q ss_pred Hh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 400 NL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 400 ~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
++ .+++.++|++||++.||.++....
T Consensus 1678 ~~~~~~~~~l~~~~~f~~~tl~~la~~i~~~~ 1709 (4334)
T PRK05691 1678 RTRQACDVELPLRALFEASELGAFAEQVARIQ 1709 (4334)
T ss_pred HHHHHhCCCcchhhhhcCCcHHHHHHHhhhhh
Confidence 54 478899999999999999997643
No 9
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-51 Score=490.84 Aligned_cols=388 Identities=20% Similarity=0.239 Sum_probs=321.3
Q ss_pred cCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.++++++|++++.+|++|+.++ ..++.+|..|+++++.+. ..++..+...++++++|+++++|+++..++.....
T Consensus 181 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~- 256 (705)
T PRK06060 181 ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSA---PVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP- 256 (705)
T ss_pred hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCC---CCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc-
Confidence 4778999999999999999887 458899999999999852 35778888999999999999999999998865322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+++||.+++|||++++++.+.+.+.+++++++|.||+||++.++..... ......++|+|++++++
T Consensus 257 ---~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~---------~~~~~~~iG~p~~~~~v 324 (705)
T PRK06060 257 ---DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRV---------DEWRLGTLGRVLPPYEI 324 (705)
T ss_pred ---ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccC---------CCCCcCcccccCCCcEE
Confidence 236789999999999999999999999988999999999999865432211 11245679999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++|+++ +.++.|||+|+|++++.||+++|+.+.. .++||+|||+|++++||+++|+||
T Consensus 325 ~i~d~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~------------------~~~~~~TGDl~~~~~dG~l~~~GR 386 (705)
T PRK06060 325 RVVAPDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVA------------------NEGWLDTRDRVCIDSDGWVTYRCR 386 (705)
T ss_pred EEECCCCCCCCCCCceEEEEccchhhhhhhCCCccccc------------------CCCcEECCeeEEECCCceEEEecc
Confidence 9998766 3466799999999999999999875321 368999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+||+||++|+||+|.|||++|.+||.|.+++|++.++...+..+++|+++............+++++++++||.||+|..
T Consensus 387 ~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~ 466 (705)
T PRK06060 387 ADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHR 466 (705)
T ss_pred cCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcE
Confidence 99999999999999999999999999999999998887777788999987655433334456899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhcccccccc------cc-c----------cC--c----c---------------cccchHH
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFTI------SA-Q----------HD--A----D---------------ETKASDL 361 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~~------~~-~----------~~--~----~---------------~~~~~~~ 361 (900)
|+++++||+|++|||||++|++.+.... .. . .. . . ......+
T Consensus 467 i~~v~~iP~t~~GKidr~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 546 (705)
T PRK06060 467 FAVVDRLPRTPNGKLVRGALRKQSPTKPIWELSLTEPGSGVRAQRDDLSASNMTIAGGNDGGATLRERLVALRQERQRLV 546 (705)
T ss_pred EEEeecCCCCcchhhHHHHHHhhccchhhhhhhccCcccCchhhhccccCCCcccCCCCCccHHHHHHHhhCcHHHHHHH
Confidence 9999999999999999999987543110 00 0 00 0 0 0011124
Q ss_pred HHHHHHHHhcccCCc---ccccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 362 LQVIRKAFGHALMVE---EVLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 362 ~~~~~~~~~~~l~~~---~i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
.+.++..|+++|+.. .++.+++||++|||||+|++|+++| .+++..+|++||+..|+.+|....
T Consensus 547 ~~~v~~~~a~vl~~~~~~~i~~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~~ 619 (705)
T PRK06060 547 VDAVCAEAAKMLGEPDPWSVDQDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAEL 619 (705)
T ss_pred HHHHHHHHHHHhCCCChhhCCCCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHHh
Confidence 457888899999874 4999999999999999999998876 478889999999999999998764
No 10
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-49 Score=364.00 Aligned_cols=352 Identities=39% Similarity=0.670 Sum_probs=301.8
Q ss_pred cccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEE
Q 002615 536 LWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 536 ~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
+|++++++|||++|+|+..|...+|++|||++.+.++|+++|+..|+..++.|+++++++..| ++++||++|.||+++
T Consensus 2 rW~vd~~kCVDaspLVV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgd--fVV~GCy~g~lYfl~ 79 (354)
T KOG4649|consen 2 RWAVDLRKCVDASPLVVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGD--FVVLGCYSGGLYFLC 79 (354)
T ss_pred ceeccchhhccCCcEEEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECC--EEEEEEccCcEEEEE
Confidence 699999999999999999999999999999999999999999999999999999999999655 799999999999999
Q ss_pred CCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcE
Q 002615 616 YLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 616 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
.+||++.|.+...+.+++.+.++.+++.||+|++|+++|++|+++..++|+.+++|.++++|+++..++.||+++..|.+
T Consensus 80 ~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~v 159 (354)
T KOG4649|consen 80 VKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAV 159 (354)
T ss_pred ecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred EEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEEE
Q 002615 696 TAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLIC 775 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g 775 (900)
.+.+.++.+...+|......|+|.++... +..+.+++.||.+.+++..|+++|++.+.++++..||...-..+.|.++
T Consensus 160 lavt~~~~~~~~~w~~~~~~PiF~splcv--~~sv~i~~VdG~l~~f~~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~ 237 (354)
T KOG4649|consen 160 LAVTKNPYSSTEFWAATRFGPIFASPLCV--GSSVIITTVDGVLTSFDESGRQVWRPATKGPIFMEPCESRPSCQQISLE 237 (354)
T ss_pred EEEccCCCCcceehhhhcCCccccCceec--cceEEEEEeccEEEEEcCCCcEEEeecCCCceecccccCCCcceEEEEe
Confidence 99999985568999999999999887664 4478889999999999988999999999999999998765444678887
Q ss_pred eeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCC-CeEEEEEcCCCcEEEEEeecCcccccccccccc
Q 002615 776 SRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSI-DRLVCICTSSGSIHILRVNLDVTGKENQSKDHM 854 (900)
Q Consensus 776 ~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~ 854 (900)
..+.. +..-+..|.++|..+.+ .+...+.+.++.+...++..+ +.++..++.||+++++..+.. -.........
T Consensus 238 ~~~Cf-~~~~p~~ghL~w~~~~g--~t~~vy~~p~l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~~s--l~~~~s~~g~ 312 (354)
T KOG4649|consen 238 NENCF-CAPLPIAGHLLWATQSG--TTLHVYLSPKLRFDLHSPGISYPKLLRRSSGDGKVMILMTSKS--LAEISSNGGE 312 (354)
T ss_pred cCCeE-EEeccccceEEEEecCC--cEEEEEeCcccceeccCCCCcchhhhhhhcCCCcEEEEEeccc--ccccccCCCc
Confidence 76664 44445669999998775 333444444444444444444 778888999999999954422 1111122222
Q ss_pred eeeeeeeccCCccccCceeeCCEEEEeeeCCeEEEEEccccc
Q 002615 855 VQEFAKLELQGDIFSSPVMIGGRVFVGCRDDYIYCIALETQH 896 (900)
Q Consensus 855 ~~~~~~~~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~~tg~ 896 (900)
.+.+...++++++|++|++.+++|++||+|+++||||+.+++
T Consensus 313 lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cldl~~~~ 354 (354)
T KOG4649|consen 313 LQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLDLDTWH 354 (354)
T ss_pred cceEEEeecCcccccCCeEEccEEEEEEccCeEEEEeccccC
Confidence 466677799999999999999999999999999999998763
No 11
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=8.2e-50 Score=437.26 Aligned_cols=309 Identities=25% Similarity=0.362 Sum_probs=273.7
Q ss_pred CCCCCCcEEEEccCcchHhHHHHHHHHHHhCC-eEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPLHGEELLLFKTSISFIDHLQEFLSAILTAC-TLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~-~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
..++..|+.++.+|++|..|+..++.+++.|+ +++..+ .+++..+++.+++|+||++.++|.++..|++.+ ..
T Consensus 220 ~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~----~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p--~~ 293 (537)
T KOG1176|consen 220 WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLR----KFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSP--IV 293 (537)
T ss_pred ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECC----CCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCC--cc
Confidence 45667899999999999999999877555555 555543 679999999999999999999999999999875 22
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
...+++++|.+.+||+++++++.+++.+.+|...+.+.||+||+++.++...... +..+.++|+++++.++.
T Consensus 294 ~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~--------e~k~~svG~~~~g~~~~ 365 (537)
T KOG1176|consen 294 KKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGP--------ERKPGSVGRLLPGVRVK 365 (537)
T ss_pred CcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCc--------cCcccccCccccceEEE
Confidence 3356899999999999999999999999998899999999999997776543221 13677899999999999
Q ss_pred EecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 164 LVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 164 i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
+.++.+ ++++.||||++|+.++.||++||+.|++.|.. ++||+|||+|++|+||+|+|++|+
T Consensus 366 v~~e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~---------------~GW~~TGDiGy~D~DG~l~IvdR~ 430 (537)
T KOG1176|consen 366 VLDETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDD---------------DGWFHTGDLGYFDEDGYLYIVDRS 430 (537)
T ss_pred eeCCCCCCCCCCCceEEEEECcccchhhcCChHHHHhhccc---------------CCccccCceEEEcCCCeEEEecch
Confidence 987666 46678999999999999999999999998843 499999999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
+|+||.+|+.|+|.|||++|..||.|.||||++.+++..++.++|||+.+++.... .++|.++++++||+|++|..+
T Consensus 431 KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lt---e~di~~~v~k~l~~y~~~~~V 507 (537)
T KOG1176|consen 431 KDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLT---EKDIIEYVRKKLPAYKLPGGV 507 (537)
T ss_pred hhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCC---HHHHHHHHHhhCChhhccCeE
Confidence 99999999999999999999999999999999999999999999999998855444 479999999999999999999
Q ss_pred EEcCCcCCCCCCCcchhhhcccccc
Q 002615 321 VFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+++++||+|++|||.|+.|++.+..
T Consensus 508 ~Fvd~lPKs~~GKi~R~~lr~~~~~ 532 (537)
T KOG1176|consen 508 VFVDELPKTPNGKILRRKLRDIAKK 532 (537)
T ss_pred EEeccCCCCCcchHHHHHHHHHHHh
Confidence 9999999999999999999987653
No 12
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-47 Score=384.77 Aligned_cols=315 Identities=21% Similarity=0.269 Sum_probs=277.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
.++++..++|+++..|++|.+|. ...+++|..|+|+|++.+ .++|...+++|+++++|.++.+|+++..+++....
T Consensus 268 ~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~---~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~ 344 (596)
T KOG1177|consen 268 ARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAP---SFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQK 344 (596)
T ss_pred HHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCC---CCChHHHHHHHHhhceEEEecChHHHHHHhcchhh
Confidence 35788888999999999999994 668999999999999865 78999999999999999999999999999977665
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. .++++||.++.||+++|+++++.+.....=..+...||+|||+...+.....+.+. ...-++|..+++.+
T Consensus 345 ~~--~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~------~~~ksVG~~m~h~E 416 (596)
T KOG1177|consen 345 QQ--VDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPE------ERIKSVGHLMDHYE 416 (596)
T ss_pred cc--CchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHH------HHHhhhhhcccccc
Confidence 43 45899999999999999999999988664345788999999998777554333221 13457899999999
Q ss_pred EEEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
..++|.++. .+..|||+++|.+.+.|||++++.|.+.. +.++||+|||.++++++|.+.++|
T Consensus 417 a~iv~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti---------------~~drW~~TGDi~~m~enG~i~iVG 481 (596)
T KOG1177|consen 417 AAIVDKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETI---------------GNDRWYDTGDIAVMDENGTIEIVG 481 (596)
T ss_pred cccccCCCCccccCCCceEEEEechhheeecCCcccchhhc---------------ccccceecCceEEEcCCCcEEEEE
Confidence 999987764 35569999999999999999999888765 348999999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.+|+|+.+|++|+|.|||+.|.+||.|.++.|+++++...++.++|++.+.+..... ...++|+.+++.++.++++|+
T Consensus 482 RskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~-~t~E~lKa~Ck~klaHFKiPk 560 (596)
T KOG1177|consen 482 RSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK-TTAETLKAMCKGKLAHFKIPK 560 (596)
T ss_pred cccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc-ccHHHHHHHHhcccccccCCc
Confidence 9999999999999999999999999999999999999999999999999988776543 456799999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+|+++++||+|.+|||+|-+++++.+
T Consensus 561 y~vf~~~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 561 YFVFVDEFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred EEEEeccCcccccccchhHHHHHHHH
Confidence 99999999999999999999987765
No 13
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=6.2e-47 Score=411.93 Aligned_cols=310 Identities=25% Similarity=0.325 Sum_probs=273.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..|.+.++|++++.+++.|..+.+. ++.+|.+|+++++.+..... +|..++++++++++|.+++.|+.+++|.+...
T Consensus 206 ~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~-~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~- 283 (528)
T COG0365 206 FHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY-SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL- 283 (528)
T ss_pred HhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC-CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC-
Confidence 3577889999999999999999977 89999999999998654333 69999999999999999999999999998754
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
....++++||.+.+.||||+++.++++.+.+ ++.|.+.||+||++........ .....+.|+|+||++
T Consensus 284 -~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~----------~~~~g~~g~p~pG~~ 351 (528)
T COG0365 284 -GEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP----------PVKNGSSGLPLPGYA 351 (528)
T ss_pred -cccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC----------CcCCCCCCCCCCCce
Confidence 3446789999999999999999999999998 7999999999999943332211 112334499999999
Q ss_pred EEEecCCCC---CCCccEEEEccc--cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 162 IVLVESDTV---KPDEGEIYAGGL--CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 162 ~~i~d~~~~---~~~~GEl~v~g~--~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+.++|+++. +++ |+|+++.+ +++++||++|+...+.|.. +||.|||.+++|+||+++|
T Consensus 352 ~~vvdd~g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~----------------~~y~tGD~~~~DedGy~~i 414 (528)
T COG0365 352 VRRVDDEGNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFG----------------RWYRTGDWAERDEDGYFWL 414 (528)
T ss_pred eEEECCCCCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhh----------------ceeecCceeEEccCCCEEE
Confidence 999998763 234 99999987 8999999999777776632 3999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||.||+||+.|+||.+.|||++|.+||.|.||+|++.+++..++.++|||+++++...+ .+.++|++++++.+.+++.
T Consensus 415 ~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~-~L~~ei~~~vr~~~~~~~~ 493 (528)
T COG0365 415 HGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN-ELAEEIRRHVARNIGPHAI 493 (528)
T ss_pred EeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChH-HHHHHHHHHHHhccCcccC
Confidence 999999999999999999999999999999999999999999999999999999988777 8889999999888877999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
|+.|+++++||+|.||||.|+.|++...
T Consensus 494 p~~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 494 PRKIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred CceEEEecCCCCCCcccHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 14
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.3e-44 Score=423.17 Aligned_cols=323 Identities=20% Similarity=0.227 Sum_probs=274.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|++++.+|++|.++.. .++.+|+.|++++++++.....++..++++|+++++|++.++|++++.|.+....
T Consensus 310 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 389 (666)
T PLN02654 310 YAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDE 389 (666)
T ss_pred HhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcc
Confidence 357899999999999999999864 4889999999999986443346899999999999999999999999999876432
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCC--ceEEeecCccccccccceecccCCccccccCCCCcceeeeccCC
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPN--ISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~--~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
.....++++||.++++||++++++++++.+.++. +.+.+.||+||+++..+...... ....+.++|+|++|
T Consensus 390 ~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~-------~~~~~gs~G~p~~g 462 (666)
T PLN02654 390 YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-------WPQKPGSATFPFFG 462 (666)
T ss_pred ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCC-------CCCCCCccCCCCCC
Confidence 2223457899999999999999999999988843 68999999999986554221110 01245679999999
Q ss_pred cEEEEecCCCC---CCCccEEEEcc--ccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcE
Q 002615 160 CDIVLVESDTV---KPDEGEIYAGG--LCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDL 234 (900)
Q Consensus 160 ~~~~i~d~~~~---~~~~GEl~v~g--~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l 234 (900)
++++|+|+++. .+..|||++++ |++++||+++++.+.+.|.. ..++||+|||++++|+||.+
T Consensus 463 ~~v~i~d~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-------------~~~g~~~TGD~~~~d~dG~l 529 (666)
T PLN02654 463 VQPVIVDEKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFK-------------PFAGYYFSGDGCSRDKDGYY 529 (666)
T ss_pred ceEEEECCCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhh-------------cCCCEEEeCceEEECCCCcE
Confidence 99999987763 23469999998 78999999999877665532 12579999999999999999
Q ss_pred EEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCC
Q 002615 235 VFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLA 314 (900)
Q Consensus 235 ~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~ 314 (900)
+|+||+||+||++|+||+|.|||++|.+||.|.+++|++.+++..++.+++||+++++....+.+.++|+++++++|+.+
T Consensus 530 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~ 609 (666)
T PLN02654 530 WLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAF 609 (666)
T ss_pred EEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999988888999999998765555566678999999999999
Q ss_pred ccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 315 MIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 315 ~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++|+.|+++++||+|++|||+|++|++.+..
T Consensus 610 ~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 610 AAPDKIHWAPGLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred cCCCEEEECCCCCCCCCcCchHHHHHHHHcC
Confidence 9999999999999999999999999987654
No 15
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.7e-43 Score=416.18 Aligned_cols=324 Identities=20% Similarity=0.251 Sum_probs=275.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|++++.+|++|..+. ..++.+|+.|+++++.+......++..+++.++++++|++.++|++++.|.+....
T Consensus 271 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 350 (625)
T TIGR02188 271 YVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDE 350 (625)
T ss_pred hccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc
Confidence 35788999999999999999876 45899999999999985433346899999999999999999999999999876433
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCC--CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCC
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFP--NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
.....++++||.+++|||++++++++.+.+.++ ++++++.||+||+++.++..... .....+.++|+|+++
T Consensus 351 ~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~-------~~~~~~~~~G~p~~g 423 (625)
T TIGR02188 351 WVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG-------ATPTKPGSATLPFFG 423 (625)
T ss_pred ccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC-------CCCcCCCcccCCcCC
Confidence 323345789999999999999999999998874 37899999999998765432111 011245679999999
Q ss_pred cEEEEecCCCC----CCCccEEEEcc--ccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCc
Q 002615 160 CDIVLVESDTV----KPDEGEIYAGG--LCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGD 233 (900)
Q Consensus 160 ~~~~i~d~~~~----~~~~GEl~v~g--~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~ 233 (900)
++++++|+++. +++.|||+|+| |++++||+++++.+.+.|.. ..++||+|||++++++||+
T Consensus 424 ~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~-------------~~~g~~~TGDl~~~d~dG~ 490 (625)
T TIGR02188 424 IEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFS-------------PFPGYYFTGDGARRDKDGY 490 (625)
T ss_pred ceEEEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhc-------------cCCCEEECCceEEEcCCCc
Confidence 99999987663 45679999999 68999999998766665532 1257999999999999999
Q ss_pred EEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCC
Q 002615 234 LVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPL 313 (900)
Q Consensus 234 l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~ 313 (900)
++|+||+||+||++|+||+|.|||++|.+||.|.+++|++.+++..++.++++|++++.....+...++|+++++++|+.
T Consensus 491 l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~ 570 (625)
T TIGR02188 491 IWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGP 570 (625)
T ss_pred EEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999888778899999999877655555678899999999999
Q ss_pred CccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 314 AMIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 314 ~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
+++|+.|+++++||+|++||++|+.|++++...
T Consensus 571 ~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 571 IAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred CccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 999999999999999999999999999886643
No 16
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1e-43 Score=412.64 Aligned_cols=323 Identities=20% Similarity=0.335 Sum_probs=270.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..++++++|+++..+|++|+.++..++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..++......
T Consensus 206 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 281 (563)
T PLN02860 206 AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLLP----KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKS 281 (563)
T ss_pred hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEecC----CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhh
Confidence 3578899999999999999999988999999999999986 578999999999999999999999999998765433
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCcc--------------ccccCCC
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPS--------------ILEMSTL 148 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~--------------~~~~~~~ 148 (900)
.....+++||.+++||+++++.+.+.+.+.|+++.+++.||+||+++.++......... .......
T Consensus 282 ~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (563)
T PLN02860 282 MTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQP 361 (563)
T ss_pred hccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhccccccccccc
Confidence 22234689999999999999999999999998899999999999986555432211000 0000011
Q ss_pred CcceeeeccCCcEEEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEE
Q 002615 149 KSVPIGLPISNCDIVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARR 228 (900)
Q Consensus 149 ~~~~~G~p~~~~~~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~ 228 (900)
...++|+|++++++++++++ +++.|||+++|++++.||+++|+.+.+.|. .++||+|||+|++
T Consensus 362 ~~~~vG~p~~~~~v~i~~~~--~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~---------------~~g~~~TGDl~~~ 424 (563)
T PLN02860 362 QGVCVGKPAPHVELKIGLDE--SSRVGRILTRGPHVMLGYWGQNSETASVLS---------------NDGWLDTGDIGWI 424 (563)
T ss_pred CCcccCCccCCcEEEEecCC--CCceeEEEEecCcccccccCCccccchhcc---------------CCCeEEccceEEE
Confidence 23478999999999999765 677899999999999999999999887663 3689999999999
Q ss_pred ccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCC-----------chH
Q 002615 229 IQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKT-----------SSE 297 (900)
Q Consensus 229 ~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~-----------~~~ 297 (900)
++||+++|+||+||+||++|++|+|.|||+++.+||.|.+++|++.++...++.++++++++++.. ...
T Consensus 425 d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~ 504 (563)
T PLN02860 425 DKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLT 504 (563)
T ss_pred cCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhccccc
Confidence 999999999999999999999999999999999999999999999988877788999999875421 012
Q ss_pred HHHHHHHHHHHh-hCCCCccCCEEEEc-CCcCCCCCCCcchhhhccccccc
Q 002615 298 IFLSSIKSWVSS-KLPLAMIPNRFVFM-DSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 298 ~~~~~l~~~l~~-~l~~~~~P~~~~~v-~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
...++|++++++ .|+.|++|..++++ ++||+|++|||+|++|++++...
T Consensus 505 ~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~~ 555 (563)
T PLN02860 505 LSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLSH 555 (563)
T ss_pred ccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHHH
Confidence 234678999987 59999999999775 67999999999999998766433
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-43 Score=414.20 Aligned_cols=324 Identities=19% Similarity=0.254 Sum_probs=272.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|++++.+|++|..+. ..++.+|+.|+++++.+......++..+++.|+++++|++.++|++++.+++....
T Consensus 280 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 359 (637)
T PRK00174 280 YVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDE 359 (637)
T ss_pred hccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCc
Confidence 35788999999999999999886 45899999999999975333345899999999999999999999999998875433
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCC--CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCC
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFP--NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
.....++++||.+++|||++++++++.+.+.++ ++.+++.||+||+++.++...... ......++|+|+++
T Consensus 360 ~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-------~~~~~~~vG~p~~g 432 (637)
T PRK00174 360 HPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA-------TPLKPGSATRPLPG 432 (637)
T ss_pred ccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC-------CCcCCCcccCCCCC
Confidence 222244789999999999999999999988874 378999999999987654321110 11234579999999
Q ss_pred cEEEEecCCCC---CCCccEEEEcc--ccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcE
Q 002615 160 CDIVLVESDTV---KPDEGEIYAGG--LCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDL 234 (900)
Q Consensus 160 ~~~~i~d~~~~---~~~~GEl~v~g--~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l 234 (900)
++++|+|+++. .++.|||+|+| +++++||+++++.+.+.|.. ..++||+|||++++++||++
T Consensus 433 ~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~-------------~~~g~~~TGDl~~~d~dG~l 499 (637)
T PRK00174 433 IQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFS-------------TFKGMYFTGDGARRDEDGYY 499 (637)
T ss_pred ceEEEECCCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhc-------------CCCCEEECCceEEEcCCCcE
Confidence 99999987663 45679999999 68999999998766554422 13579999999999999999
Q ss_pred EEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCC
Q 002615 235 VFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLA 314 (900)
Q Consensus 235 ~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~ 314 (900)
+|+||+||+||++|+||+|.|||++|.+||+|.+|+|++.++...++.+++++++.+.....+...++|+++++++|+.+
T Consensus 500 ~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~ 579 (637)
T PRK00174 500 WITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPI 579 (637)
T ss_pred EEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999998887788999999988765444555678999999999999
Q ss_pred ccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 315 MIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 315 ~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
++|..++++++||+|++||++|++|++.....
T Consensus 580 ~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 580 AKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred cCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 99999999999999999999999999876543
No 18
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.2e-44 Score=408.92 Aligned_cols=315 Identities=27% Similarity=0.382 Sum_probs=270.6
Q ss_pred cCC--CCCCcEEEEccCcchHhHHHHHH-HHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 4 LYP--LHGEELLLFKTSISFIDHLQEFL-SAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 4 ~~~--~~~~d~~l~~~p~~~~~~~~~~~-~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.++ ++++|+++.++|++|++|+...+ .+++.|+++++.++ ..+++..++..+.++++|++.++|+++..++....
T Consensus 206 ~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~--~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~ 283 (534)
T COG0318 206 ALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSP--EPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPE 283 (534)
T ss_pred HhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCC--CCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCc
Confidence 455 88999999999999999998754 45899999999852 14789999999999999999999999999887755
Q ss_pred hccCCCCCC-CcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCC
Q 002615 81 SQHNMHVPS-SLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 81 ~~~~~~~~~-~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
.... .++ +||.++.||+++++++++++.+.|+..++++.||+||++..++...... . ......+|+|+++
T Consensus 284 ~~~~--~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~------~~~~~~~G~~~pg 354 (534)
T COG0318 284 KDDD--DLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDD-L------LAKPGSVGRPLPG 354 (534)
T ss_pred cCcc--ccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCch-h------hhcCCcccccCCC
Confidence 4432 233 4999999999999999999999997678999999999997766543222 1 1133445999999
Q ss_pred cEEEEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 160 CDIVLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 160 ~~~~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
++++|+|+++. ++..|||+|+||.++.||+++|+.|++.|.. ++||+|||+|++|++|.++|
T Consensus 355 ~~v~Ivd~~~~~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~---------------~gW~~TGDlg~~d~~G~l~i 419 (534)
T COG0318 355 VEVRIVDPDGGEVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDE---------------DGWLRTGDLGYVDEDGYLYI 419 (534)
T ss_pred cEEEEEeCCCCccCCCCceEEEEECchhhhhhcCChHHHHHhhcc---------------CCeeeecceEEEcCCccEEE
Confidence 99999987653 3557999999999999999999999987632 48999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||.+|+||.+|++|+|.|||.++.+||.|.+++|++.+++..++.++|++++++... .....++|+++++++++.|++
T Consensus 420 ~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~-~~~~~~~i~~~~~~~l~~~~~ 498 (534)
T COG0318 420 VGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGD-AELTAEELRAFLRKRLALYKV 498 (534)
T ss_pred EeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCC-CCCCHHHHHHHHHhhhhcccC
Confidence 9999999999999999999999999999999999999999988999999999987532 112457899999999999999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
|+.++++++||+|++||++|++|++.+..
T Consensus 499 P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 499 PRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 99999999999999999999999876543
No 19
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.7e-43 Score=413.49 Aligned_cols=325 Identities=19% Similarity=0.258 Sum_probs=268.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|++++.+|++|+.++ ..++.+|+.|+++++++......++..+++.|+++++|++.++|++++.|.+....
T Consensus 267 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 346 (628)
T TIGR02316 267 AIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA 346 (628)
T ss_pred HhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc
Confidence 45789999999999999999986 56899999999999986433456899999999999999999999999988765332
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.....++++||.+++|||++++++.+++.+.+ +..+++.||+||++..++...... ........++|+|+++++
T Consensus 347 ~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~-----~~~~~~~gs~G~p~~g~~ 420 (628)
T TIGR02316 347 WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGL-----DLKPVKLGSPGLPMYGYH 420 (628)
T ss_pred ccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCC-----CcCCCCCCCcccCcCCce
Confidence 22234578999999999999999999998877 678999999999985433221110 001123457899999999
Q ss_pred EEEecC-CC---CCCCccEEEEccc---cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcE
Q 002615 162 IVLVES-DT---VKPDEGEIYAGGL---CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDL 234 (900)
Q Consensus 162 ~~i~d~-~~---~~~~~GEl~v~g~---~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l 234 (900)
++|+|+ ++ +.++.|||+++|| +++.||+++++.+.+.|... ..++||+|||+|++|+||++
T Consensus 421 v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~TGD~g~~d~dG~l 488 (628)
T TIGR02316 421 LRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSH------------FKRPLYSSFDWGIRDEDGYT 488 (628)
T ss_pred EEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhc------------CCCCEEECCceEEEcCCCcE
Confidence 999987 33 2456799999998 57889999876554443221 13579999999999999999
Q ss_pred EEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCC-----chHHHHHHHHHHHHh
Q 002615 235 VFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKT-----SSEIFLSSIKSWVSS 309 (900)
Q Consensus 235 ~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~-----~~~~~~~~l~~~l~~ 309 (900)
+|+||+||+||++|+||+|.|||++|.+||.|.+|+|++.+++..++.+++||++++... ..+...++|++++++
T Consensus 489 ~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~ 568 (628)
T TIGR02316 489 FILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVR 568 (628)
T ss_pred EEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888889999999875432 123456789999999
Q ss_pred hCCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 310 KLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 310 ~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+|+.|++|+.++++++||+|++|||+|++|++.+..
T Consensus 569 ~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~ 604 (628)
T TIGR02316 569 QLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEG 604 (628)
T ss_pred hcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcC
Confidence 999999999999999999999999999999987654
No 20
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-43 Score=411.78 Aligned_cols=319 Identities=17% Similarity=0.244 Sum_probs=266.2
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhh--hhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIEL--KKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~--~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
.++..++|++++.+|++|..+...++.+|+.|+++++++.... ...+..+++.++++++|++.++|++++.|++....
T Consensus 290 ~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 369 (647)
T PTZ00237 290 IIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPE 369 (647)
T ss_pred hcCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcc
Confidence 3567789999999999999877778999999999999753211 12268899999999999999999999999875322
Q ss_pred c---cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccC
Q 002615 82 Q---HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPIS 158 (900)
Q Consensus 82 ~---~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~ 158 (900)
. ....++++||.+++|||++++++.+++.+.+ ++.+++.||+||+++.++... .. ......++|+|++
T Consensus 370 ~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~-~~-------~~~~~~s~G~p~~ 440 (647)
T PTZ00237 370 ATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCY-GH-------INIPYNATGVPSI 440 (647)
T ss_pred ccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccC-CC-------CCCCCCCCccCcC
Confidence 1 1223578999999999999999999999888 689999999999986544211 10 1113467899999
Q ss_pred CcEEEEecCCCC---CCCccEEEEccc---cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCC
Q 002615 159 NCDIVLVESDTV---KPDEGEIYAGGL---CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSG 232 (900)
Q Consensus 159 ~~~~~i~d~~~~---~~~~GEl~v~g~---~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G 232 (900)
+++++|+|+++. .++.|||+++|| +++.||+++++.+.+.|.. .++||+|||+|++++||
T Consensus 441 g~~~~i~d~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~--------------~~g~~~TGDlg~~d~dG 506 (647)
T PTZ00237 441 FIKPSILSEDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSK--------------FPGYYNSGDLGFKDENG 506 (647)
T ss_pred CceEEEECCCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhC--------------CCCEEECCcEEEECCCC
Confidence 999999987663 456799999986 7899999999888766632 25799999999999999
Q ss_pred cEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCC----chHHHHHHHHHHHH
Q 002615 233 DLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKT----SSEIFLSSIKSWVS 308 (900)
Q Consensus 233 ~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~----~~~~~~~~l~~~l~ 308 (900)
+++|+||+||+||++|+||+|.|||++|.+||.|.+++|++.+++..++.+++||++++... ..+.+.++|+++++
T Consensus 507 ~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~ 586 (647)
T PTZ00237 507 YYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIIT 586 (647)
T ss_pred eEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877788999999874321 22455678899999
Q ss_pred hhCCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 309 SKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 309 ~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++|+.+++|+.|+++++||+|++|||+|+.|+++...
T Consensus 587 ~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 587 QDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred hhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcC
Confidence 9999999999999999999999999999999987643
No 21
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-42 Score=403.51 Aligned_cols=305 Identities=23% Similarity=0.290 Sum_probs=262.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++..+|++|..++..++.++..|+++++.+ .+++..+++.++++++|++.++|++++.++......
T Consensus 241 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 316 (549)
T PRK07788 241 SRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRR----RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEV 316 (549)
T ss_pred hhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECC----CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccc
Confidence 3567889999999999999999988889999999999985 678999999999999999999999999998765432
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
.....+++||.+++|||++++++++.+.+.+ +..++|.||+||++..+.... .. ......++|+|++++++
T Consensus 317 ~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~-~~-------~~~~~~~vG~~~~~~~~ 387 (549)
T PRK07788 317 LAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIATP-ED-------LAEAPGTVGRPPKGVTV 387 (549)
T ss_pred cCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccCh-hh-------hhhcCCCcccCCCCcEE
Confidence 2223478999999999999999999999988 578999999999886543221 10 01244679999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++|+++ +.++.|||+|+|+.++.||+++++. . + .++||+|||+++++++|.++|+||
T Consensus 388 ~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~----------------~~g~~~TGDl~~~~~~g~l~~~GR 448 (549)
T PRK07788 388 KILDENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I----------------IDGLLSSGDVGYFDEDGLLFVDGR 448 (549)
T ss_pred EEECCCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c----------------cCCceecCceEEEcCCCCEEEecc
Confidence 9998766 3466799999999999999998764 1 1 257999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+||+||++|++|+|.|||++|.+||.|.+++|++.+++..++.++++|+++++.... .++|+++++++||.|++|..
T Consensus 449 ~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~ 525 (549)
T PRK07788 449 DDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALD---EDAIKDYVRDNLARYKVPRD 525 (549)
T ss_pred CcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCC---HHHHHHHHHHhhhcCCCCcE
Confidence 999999999999999999999999999999999988877778899999987654322 36899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSAS 342 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~ 342 (900)
++++++||+|++|||+|++|+++
T Consensus 526 i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 526 VVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999999999999999999764
No 22
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-42 Score=396.48 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=251.9
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.++++++|++++.+|++|+.++..++.+|+.|+++++.+. ..++..+++.|+++++|++.++|++++.|++......
T Consensus 154 ~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~---~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~ 230 (499)
T PLN03051 154 HMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG---APLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAM 230 (499)
T ss_pred hcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC---CCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccc
Confidence 4688999999999999999998888999999999999852 2467889999999999999999999999876432011
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCC-CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFP-NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...++++||.+++|||++++++.+.+.+.++ ++.+++.||+||++..++.... . ......++|+|.+++++
T Consensus 231 ~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~-~-------~~~~~~~~G~p~~~~~~ 302 (499)
T PLN03051 231 EGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL-L-------QPQAPGAFSTASLGTRF 302 (499)
T ss_pred ccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc-c-------CCCCCccccCCCCCceE
Confidence 1234689999999999999999887776331 4789999999998754332110 0 01134579999999999
Q ss_pred EEecCCCC---CC--CccEEEEccccc--cccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEE
Q 002615 163 VLVESDTV---KP--DEGEIYAGGLCL--SNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLV 235 (900)
Q Consensus 163 ~i~d~~~~---~~--~~GEl~v~g~~~--~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~ 235 (900)
+|+|+++. .+ ..|||+++|+.+ +.||++++. +. .|.. ..++. ...+.+||+|||+|++|+||+++
T Consensus 303 ~ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~-~~~~--g~~~~----~~~~~~~~~TGDlg~~d~dG~l~ 374 (499)
T PLN03051 303 VLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DK-VYYK--GMPMY----GSKGMPLRRHGDIMKRTPGGYFC 374 (499)
T ss_pred EEECCCCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cc-eeee--cCCcc----ccCCcceeecCCeEEECCCCcEE
Confidence 99987663 23 369999999976 579998653 32 3321 10000 01235699999999999999999
Q ss_pred EEcccCCcEEECceeeChHHHHHHHhC-CCCeeEEEEEEeecCCce-EEEEEEE---EecCCC--CchHHHHHHHHHHHH
Q 002615 236 FLGRKDRTIKINGQRMALEEIEHTLRG-HPDVVDTAVVSHKHQGEL-VILVAFI---VLKEKK--TSSEIFLSSIKSWVS 308 (900)
Q Consensus 236 ~~GR~dd~ik~~G~rv~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~-~~l~~~v---~~~~~~--~~~~~~~~~l~~~l~ 308 (900)
|+||+||+||++|+||+|.|||++|.+ ||.|.+|+|++.++...+ +.++++| +++++. ...+.+.+.++++++
T Consensus 375 ~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~ 454 (499)
T PLN03051 375 VQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQ 454 (499)
T ss_pred EEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHH
Confidence 999999999999999999999999996 999999999999887766 6788888 665543 223445556667777
Q ss_pred hhCCCCccCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 309 SKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 309 ~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++|+.++.|..++++++||+|++|||+|++|++.+.
T Consensus 455 ~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~ 490 (499)
T PLN03051 455 TNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLK 490 (499)
T ss_pred hhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHH
Confidence 889887777789999999999999999999986543
No 23
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.7e-42 Score=399.12 Aligned_cols=305 Identities=23% Similarity=0.346 Sum_probs=252.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|++++++|++|.+++.. ++.++..|+++++... ..++..+++.|+++++|++.++|++++.+++....
T Consensus 217 ~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 293 (539)
T PRK06334 217 KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYN---PLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKK 293 (539)
T ss_pred HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecC---CCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhh
Confidence 3577889999999999999999854 7889999999998742 46899999999999999999999999999876543
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. ..+++||.+++|||++++++.+.+.+.+|++.+++.||+||++.+++..... ......++|+|+++++
T Consensus 294 ~~--~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~--------~~~~~~~vG~p~~g~~ 363 (539)
T PRK06334 294 QE--SCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVN--------SPKHESCVGMPIRGMD 363 (539)
T ss_pred cc--cccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCC--------CCCCCCcCceecCCCE
Confidence 22 3468999999999999999999999999889999999999998766543211 1113457899999999
Q ss_pred EEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++|+|++. ++++.|||+|+|++++.||+++|+.+. |... ++++||+|||+|+++++|+++|+
T Consensus 364 v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~--~~~~------------~~~~w~~TGD~g~~d~~G~l~~~ 429 (539)
T PRK06334 364 VLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQG--FVEL------------GGETWYVTGDLGYVDRHGELFLK 429 (539)
T ss_pred EEEEcCCCCccCCCCceEEEEEecCcccccccCCccccc--ceee------------CCceeEECCCEEEECCCCeEEEE
Confidence 99998543 356789999999999999999988543 2211 14689999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeE------EEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVD------TAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK- 310 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~------~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~- 310 (900)
||.||+||++|++|+|.|||++|.+||+|.+ ++|++.++. ...++++++... ..+++++++++.
T Consensus 430 GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~-------~~~~~~~~l~~~~ 500 (539)
T PRK06334 430 GRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGE--KVRLCLFTTFPT-------SISEVNDILKNSK 500 (539)
T ss_pred eccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCC--ceEEEEEEeccC-------ChHHHHHHHHhcC
Confidence 9999999999999999999999999999987 666666643 234556655321 135788889886
Q ss_pred CCCCccCCEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 311 LPLAMIPNRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 311 l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
++.|++|+.++++++||+|++|||||++|+++.
T Consensus 501 ~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 501 TSSILKISYHHQVESIPMLGTGKPDYCSLNALA 533 (539)
T ss_pred CcccccchheeeecccccccCCcccHHHHHHHH
Confidence 789999999999999999999999999998653
No 24
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-43 Score=349.34 Aligned_cols=307 Identities=24% Similarity=0.381 Sum_probs=269.9
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH--HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE--FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~--~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
+..++++.++.|+.+|..|.+.+.. .++.+++|+++|+.+ ..+|..-+.+|++|+||+..++|.+...++.+.+
T Consensus 223 EiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~----~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e 298 (542)
T COG1021 223 EICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAP----DPSPELCFPLIERHGVTVTALVPPLASLWLQAAE 298 (542)
T ss_pred hhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECC----CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhh
Confidence 4678899999999999999988865 899999999999997 6789999999999999999999999999998876
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeecc-CC
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPI-SN 159 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~ 159 (900)
.. ..+++|||.+-+||..+++++.+++...+ ++.+-+.+||.|.-+. +....+.++. -...-|+|+ |.
T Consensus 299 ~~--~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAEGLvn--yTRLDDp~E~------i~~TQGrPlsP~ 367 (542)
T COG1021 299 WE--RADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAEGLVN--YTRLDDPPEI------IIHTQGRPLSPD 367 (542)
T ss_pred cc--cCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhhhhhc--ccccCCchHh------eeecCCCcCCCc
Confidence 64 35689999999999999999999999998 9999999999995432 2222222221 233568887 56
Q ss_pred cEEEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 160 CDIVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 160 ~~~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
-+++|+|.++ .++++|||..+||...+||++.|+-++..|.. +++|+|||++++++||++.+
T Consensus 368 DEvrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a---------------~GFYrsGD~V~~~~dGyl~V 432 (542)
T COG1021 368 DEVRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDA---------------DGFYRSGDLVRRDPDGYLVV 432 (542)
T ss_pred ceeEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCc---------------CCceecCceeEecCCceEEE
Confidence 7899999877 46788999999999999999999999999854 89999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-CCCCc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK-LPLAM 315 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~-l~~~~ 315 (900)
.||.+|||+++|++|-.+|||+.|..||.|.+|+++..+++-.+++.+|||++++.... ..+++.+|.+. +..|+
T Consensus 433 ~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~~----~~qlr~~L~~~GlAa~K 508 (542)
T COG1021 433 EGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPLR----AAQLRRFLRERGLAAFK 508 (542)
T ss_pred EeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCCC----HHHHHHHHHHcchhhhc
Confidence 99999999999999999999999999999999999999999889999999999876533 24788888765 88999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
+|++|.++++||+|+-||||+++|++..
T Consensus 509 ~PDrie~v~~~P~T~VGKIdKk~Lr~~l 536 (542)
T COG1021 509 LPDRIEFVDSLPLTAVGKIDKKALRRRL 536 (542)
T ss_pred CCcceeecccCCCcccccccHHHHHHHh
Confidence 9999999999999999999999998654
No 25
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-42 Score=403.04 Aligned_cols=324 Identities=17% Similarity=0.202 Sum_probs=266.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..+++.++|++++.+++.|+.+. .++.+|+.|+++++.+......++..++++++++++|++.++|++++.+.......
T Consensus 298 ~~~~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 376 (655)
T PRK03584 298 LHCDLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVP 376 (655)
T ss_pred HhcCCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCc
Confidence 35788999999999999998653 36789999999999854333568999999999999999999999999887542211
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhC-CCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLF-PNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
....++++||.+++|||++++++++.+.+.+ +++.+++.||+||++....... .. ......++|.|+++++
T Consensus 377 ~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~-~~-------~~~~~g~~g~p~~g~~ 448 (655)
T PRK03584 377 GETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGN-PL-------LPVYRGEIQCRGLGMA 448 (655)
T ss_pred cccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCC-CC-------CCcCCCccCCCcCCce
Confidence 1224578999999999999999999999887 4689999999999864332111 00 1123467899999999
Q ss_pred EEEecCCCC--CCCccEEEEccc--cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVESDTV--KPDEGEIYAGGL--CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~~~--~~~~GEl~v~g~--~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++|+|+++. .++.|||+|+|+ +++.||+++++.+. |...... ...+||+|||+|++|+||+++|+
T Consensus 449 ~~ivd~~g~~~~g~~GeL~v~gp~p~~~~gy~~~~~~~~--~~~~~~~---------~~~g~~~TGDl~~~d~dG~l~i~ 517 (655)
T PRK03584 449 VEAWDEDGRPVVGEVGELVCTKPFPSMPLGFWNDPDGSR--YRDAYFD---------TFPGVWRHGDWIEITEHGGVVIY 517 (655)
T ss_pred eEEECCCCCCCCCCceEEEEccCCCCCcceeeCCCccch--HHHhhhc---------cCCCEeecCCeEEECCCCeEEEE
Confidence 999997764 367799999996 78999999987543 2111100 12468999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||+||+||++|+||+|.|||++|.+||.|.+|+|++.+++..++.+++||+++++....+.+.++|+++++++|+.|++|
T Consensus 518 GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P 597 (655)
T PRK03584 518 GRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVP 597 (655)
T ss_pred eeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCC
Confidence 99999999999999999999999999999999999999877788999999998765555556678999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
..|+++++||+|++|||+|++|++.+...
T Consensus 598 ~~i~~v~~lP~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 598 DKIIAVPDIPRTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred CEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 99999999999999999999999876543
No 26
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-41 Score=399.46 Aligned_cols=310 Identities=19% Similarity=0.287 Sum_probs=259.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhh--hcHHHHHHHHHHcCeeEEEecHHHHHHHHHHH
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELK--KNLISIIHFLQAYSISRLTTVPSLMRVVLPAL 79 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~--~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~ 79 (900)
+.+++.++|++++.+|++|..++. .++.+|..|++++++++.... .....+++.++++++|++.++|+++..++...
T Consensus 247 ~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 326 (632)
T PRK07529 247 LLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVP 326 (632)
T ss_pred HhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc
Confidence 356788999999999999998875 589999999999998643221 12467889999999999999999999998654
Q ss_pred hhccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCC
Q 002615 80 QSQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 80 ~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
... .++++||.+++||+++++++.+.+.+.+ +++++|.||+||++++++..... ......++|+|+++
T Consensus 327 ~~~---~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~--------~~~~~~svG~~~p~ 394 (632)
T PRK07529 327 VDG---HDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPD--------GERRIGSVGLRLPY 394 (632)
T ss_pred ccC---CCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCcc--------ccccCCCcccccCC
Confidence 322 3478999999999999999999999887 89999999999998766543211 11245689999999
Q ss_pred cEEEEe--cCCC------CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccC
Q 002615 160 CDIVLV--ESDT------VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQS 231 (900)
Q Consensus 160 ~~~~i~--d~~~------~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~ 231 (900)
+.++++ |+++ ++++.|||+|+|++++.||++++. +...|. .++||+|||+|++++|
T Consensus 395 ~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~---------------~~gw~~TGDlg~~d~d 458 (632)
T PRK07529 395 QRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWL---------------EDGWLNTGDLGRIDAD 458 (632)
T ss_pred ceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCcc-cccccc---------------CCCceEcCcEEEEcCC
Confidence 999885 4433 346779999999999999998654 444432 3689999999999999
Q ss_pred CcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhC
Q 002615 232 GDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKL 311 (900)
Q Consensus 232 G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l 311 (900)
|+++|.||+||+||++|++|+|.+||++|.+||.|.+|+|++.++...++.++++|++.+..... .+++++++++++
T Consensus 459 G~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~---~~~l~~~~~~~l 535 (632)
T PRK07529 459 GYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASAT---EAELLAFARDHI 535 (632)
T ss_pred ceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCC---HHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998887788899999988654433 357899999998
Q ss_pred C-CCccCCEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 312 P-LAMIPNRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 312 ~-~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
+ .+++|..|+++++||+|++|||+|++|++.+
T Consensus 536 ~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~ 568 (632)
T PRK07529 536 AERAAVPKHVRILDALPKTAVGKIFKPALRRDA 568 (632)
T ss_pred chhccCCcEEEEecCCCCCCCCcccHHHHHHHH
Confidence 7 4799999999999999999999999998654
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.5e-42 Score=397.12 Aligned_cols=313 Identities=22% Similarity=0.283 Sum_probs=269.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++.++|++++.+|++|..+. ..++.+++.|+++++.+. .+++..+++.|+++++|++.++|++++.+......
T Consensus 239 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 315 (570)
T PRK04319 239 YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG---RFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDD 315 (570)
T ss_pred HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC---CCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCc
Confidence 35678899999999999999875 558999999999998742 56899999999999999999999999999865322
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
......+++||.+++|||++++++.+.+.+.+ +.++++.||+||++..++..... ....+.++|+|+++++
T Consensus 316 ~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~--------~~~~~~~~G~p~~g~~ 386 (570)
T PRK04319 316 LVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPA--------MDIKPGSMGKPLPGIE 386 (570)
T ss_pred ccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCC--------CCCCCCcCcCCCCCCE
Confidence 22223478999999999999999999998887 68899999999998755432111 1124567999999999
Q ss_pred EEEecCCC---CCCCccEEEEcc--ccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 162 IVLVESDT---VKPDEGEIYAGG--LCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g--~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
++|+|+++ ++++.|||+++| +++++||+++++.+.+.|. ++||+|||+++++++|++++
T Consensus 387 ~~i~d~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~----------------~gw~~TGDl~~~~~~g~l~~ 450 (570)
T PRK04319 387 AAIVDDQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFA----------------GDWYVSGDSAYMDEDGYFWF 450 (570)
T ss_pred EEEECCCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhc----------------CCceEeCcEEEECCCeeEEE
Confidence 99998765 356779999987 8999999999998887762 47999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||+||+||++|++|+|.|||++|.+||.|.+++|++.++...++.+++++++.++....+.+.++|+++++++|+.|++
T Consensus 451 ~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 530 (570)
T PRK04319 451 QGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAA 530 (570)
T ss_pred EecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccC
Confidence 99999999999999999999999999999999999998887777889999998776544555667899999999999999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
|..++++++||+|++||++|++|+++.
T Consensus 531 P~~i~~v~~iP~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 531 PREIEFKDKLPKTRSGKIMRRVLKAWE 557 (570)
T ss_pred CcEEEEeCCCCCCCchhhhHHHHHHHH
Confidence 999999999999999999999998764
No 28
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.9e-41 Score=395.30 Aligned_cols=320 Identities=16% Similarity=0.193 Sum_probs=261.4
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.++++++|++++.+|+.|+.+. .++.+|+.|+++++++......++..++++++++++|++..+|++++.+........
T Consensus 300 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~ 378 (652)
T TIGR01217 300 HCDLGPGDRLFYYTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPA 378 (652)
T ss_pred ccCCCCCcEEEEeCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCcc
Confidence 5789999999999999998643 366899999999998532223478899999999999999888888877654321111
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCC-CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFP-NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...++++||.+++|||++++++.+.+.+.++ +..+.+.||+||++....... +. .......+|.|.+++++
T Consensus 379 ~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~----~~----~~~~~g~~g~p~~g~~v 450 (652)
T TIGR01217 379 RTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGAN----PT----LPVHIGEIQAPGLGTAV 450 (652)
T ss_pred ccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCC----CC----CCCcCCccCCCcCCCce
Confidence 2245789999999999999999999988773 467889999999753222110 00 01133568999999999
Q ss_pred EEecCCCC--CCCccEEEEccc--cccccccCCCCCCc--cchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 163 VLVESDTV--KPDEGEIYAGGL--CLSNGYFSESTFMP--SEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 163 ~i~d~~~~--~~~~GEl~v~g~--~~~~gY~~~~~~~~--~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+++|+++. +++.|||+++|+ +++.|||++|+.+. +.+.. ..++||+|||+|++|+||+++|
T Consensus 451 ~ivd~~g~~~~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~-------------~~~g~~~tGDlg~~d~dG~l~i 517 (652)
T TIGR01217 451 QSWDPEGKPVTGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFD-------------TYPGVWRHGDWITLTPRGGIVI 517 (652)
T ss_pred EEECCCCCCCCCCccEEEEecCCCccccceeCCCccchhHHhhhc-------------CCCCEEEcCCcEEECCCCcEEE
Confidence 99988764 367899999996 68999999998653 11111 1246899999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||+||+||++|+||+|.|||++|.+||.|.+|+|++.+++..++.+++||+++++....+.+.++|+++++++|+.|++
T Consensus 518 ~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 597 (652)
T TIGR01217 518 HGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHV 597 (652)
T ss_pred EecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcC
Confidence 99999999999999999999999999999999999999998888899999999876555555668999999999999999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
|+.|+++++||+|++|||+|+.|++.+..
T Consensus 598 P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 598 PDEIIEVPGIPHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred CCEEEECCCCCCCCCccChHHHHHHHHcC
Confidence 99999999999999999999999987643
No 29
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-41 Score=398.98 Aligned_cols=325 Identities=22% Similarity=0.291 Sum_probs=267.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++.++|++++.+|++|..+. ..++.+|+.|+++++.+......++..++++|+++++|++.++|++++.+.+....
T Consensus 268 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 347 (629)
T PRK10524 268 TIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA 347 (629)
T ss_pred HhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc
Confidence 35788999999999999998875 56899999999999986443456889999999999999999999999988764322
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.....++++||.+++|||++++++.+++.+.+ ++++++.||+||++..++..... . ........++|+|+++++
T Consensus 348 ~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~-~----~~~~~~~~~~G~p~~g~~ 421 (629)
T PRK10524 348 LLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARG-V----EDRPTRLGSPGVPMYGYN 421 (629)
T ss_pred cccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCC-c----ccCcCCCCCcccCcCCce
Confidence 11223478999999999999999999998887 68899999999998433322111 0 001123567899999999
Q ss_pred EEEecC-CC---CCCCccEEEEccc---cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcE
Q 002615 162 IVLVES-DT---VKPDEGEIYAGGL---CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDL 234 (900)
Q Consensus 162 ~~i~d~-~~---~~~~~GEl~v~g~---~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l 234 (900)
++|+|+ ++ +.++.|||+++|| +++.||+++++.+.+.|.... .++||+|||+|++++||++
T Consensus 422 ~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~TGDl~~~d~dG~l 489 (629)
T PRK10524 422 VKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLF------------GRQVYSTFDWGIRDADGYY 489 (629)
T ss_pred EEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccC------------CCcEEEcCCcEEEcCCCcE
Confidence 999987 55 3456799999998 578899998765544432211 3579999999999999999
Q ss_pred EEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc-----hHHHHHHHHHHHHh
Q 002615 235 VFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS-----SEIFLSSIKSWVSS 309 (900)
Q Consensus 235 ~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~-----~~~~~~~l~~~l~~ 309 (900)
+|+||.||+||++|+||+|.|||++|.+||.|.+++|++.++...++.+++|++++..... .+.+.++|++++++
T Consensus 490 ~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~ 569 (629)
T PRK10524 490 FILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDS 569 (629)
T ss_pred EEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999888777889999998764321 23456789999999
Q ss_pred hCCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 310 KLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 310 ~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+|+.+++|..|+++++||+|++|||+|++|++....
T Consensus 570 ~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 570 QLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred hcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 999999999999999999999999999999987653
No 30
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.5e-41 Score=391.11 Aligned_cols=306 Identities=21% Similarity=0.293 Sum_probs=260.9
Q ss_pred CCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCC
Q 002615 9 GEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHV 87 (900)
Q Consensus 9 ~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~ 87 (900)
.+++++..+|++|..++.. ++.++..|+++++.+ .+++..+++.|+++++|++.++|++++.+.+..... ...+
T Consensus 243 ~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~ 317 (560)
T PLN02574 243 SDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR----RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV-CGEV 317 (560)
T ss_pred CCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec----CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc-ccCc
Confidence 5688999999999998865 667778899999886 578999999999999999999999999998754321 1234
Q ss_pred CCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC
Q 002615 88 PSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES 167 (900)
Q Consensus 88 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 167 (900)
+++||.+++||+++++++++.+.+.++++.+++.||+||+++.++...... ......++|+|+++++++|+|+
T Consensus 318 ~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-------~~~~~~~vG~~~~~~~v~i~d~ 390 (560)
T PLN02574 318 LKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTE-------KLSKYSSVGLLAPNMQAKVVDW 390 (560)
T ss_pred cccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCcc-------ccCCCCceeeeCCCcEEEEEeC
Confidence 789999999999999999999999998899999999999986544211100 1123568999999999999984
Q ss_pred C-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCc
Q 002615 168 D-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRT 243 (900)
Q Consensus 168 ~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ 243 (900)
+ + +.++.|||+|+|++++.||+++++.+++.|. .++||+|||+|+++++|.++++||+||+
T Consensus 391 ~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~---------------~~g~~~TGDlg~~~~~G~l~i~GR~~d~ 455 (560)
T PLN02574 391 STGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTID---------------KDGWLRTGDIAYFDEDGYLYIVDRLKEI 455 (560)
T ss_pred CCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhcc---------------CCCCcccceEEEEECCCeEEEEecchhh
Confidence 3 3 3567899999999999999999999887763 2689999999999999999999999999
Q ss_pred EEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEc
Q 002615 244 IKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFM 323 (900)
Q Consensus 244 ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v 323 (900)
||++|++|+|.|||++|.+||.|.+++|++.+++..++.++++++.++..... .++|+++++++|+.|+.|..++++
T Consensus 456 i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~v~~v 532 (560)
T PLN02574 456 IKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLS---QEAVINYVAKQVAPYKKVRKVVFV 532 (560)
T ss_pred eEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCCCC---HHHHHHHHHHhccCcccCcEEEEe
Confidence 99999999999999999999999999999988877777888998876543322 368999999999999999999999
Q ss_pred CCcCCCCCCCcchhhhccccc
Q 002615 324 DSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 324 ~~lP~t~~GKidr~~L~~~~~ 344 (900)
++||+|++|||+|++|++...
T Consensus 533 ~~iP~t~~GKi~r~~L~~~~~ 553 (560)
T PLN02574 533 QSIPKSPAGKILRRELKRSLT 553 (560)
T ss_pred eccCCCCcchhhHHHHHHHHh
Confidence 999999999999999987654
No 31
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=366.47 Aligned_cols=323 Identities=24% Similarity=0.323 Sum_probs=281.4
Q ss_pred CccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 2 QDLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 2 ~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
...|++.++|++.+.+-+.++.+.+. .+.+|++|+|+++.+.. +.++..+++.+.+++||++.+.|++++.+.....
T Consensus 273 ~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~--p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~ 350 (626)
T KOG1175|consen 273 RYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGP--PFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQ 350 (626)
T ss_pred ceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCC--CCChhhhhhhHhhcceEEEEeccHHHHHHHHhcc
Confidence 45789999999999999999988866 67799999999998643 3399999999999999999999999998887665
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCc
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNC 160 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~ 160 (900)
+.......++||.+.+.|||+.++.+..+.+.+....|++.||+||+|.+++....... ...+...+.|.+++
T Consensus 351 ~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~-------p~~pg~~~~p~~g~ 423 (626)
T KOG1175|consen 351 EDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL-------PIKPGSAGKPFPGY 423 (626)
T ss_pred ccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC-------CcCccccCCCCCCc
Confidence 55444444789999999999999999999998833369999999999998875433221 23677899999999
Q ss_pred EEEEecCCCC--CC--CccEEEEccc---cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCc
Q 002615 161 DIVLVESDTV--KP--DEGEIYAGGL---CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGD 233 (900)
Q Consensus 161 ~~~i~d~~~~--~~--~~GEl~v~g~---~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~ 233 (900)
.+.|+|+++. ++ +.|||++..+ +.+++|+++++ +|...... .-.++|.|||.+++|+||+
T Consensus 424 ~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~e----rf~~~yf~---------k~pg~y~tGD~~~rd~dGY 490 (626)
T KOG1175|consen 424 DVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHE----RFRAAYFK---------KFPGYYFTGDGGRRDEDGY 490 (626)
T ss_pred ceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHH----Hhhhhhcc---------cCCceEEecCceEEcCCce
Confidence 9999998663 22 6799999874 78999999987 33332221 1368999999999999999
Q ss_pred EEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCC
Q 002615 234 LVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPL 313 (900)
Q Consensus 234 l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~ 313 (900)
++++||.||+|+++|+|+.+.|||+++.+||.|.|++|++.+++..++.++|||+++++....+.+.++|++++++.+.+
T Consensus 491 ~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp 570 (626)
T KOG1175|consen 491 YWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGP 570 (626)
T ss_pred EEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred CccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 314 AMIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 314 ~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
+..|+.|++++.||+|.+|||.|++|++.....
T Consensus 571 ~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 571 YAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred ccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 999999999999999999999999999987765
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.8e-41 Score=386.16 Aligned_cols=303 Identities=23% Similarity=0.299 Sum_probs=258.5
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++.++|+++..+|++|..++..++.++..|+++++.+ .+++..+++.|+++++|++.++|++++.+++......
T Consensus 231 ~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 306 (537)
T PRK13382 231 RTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRR----RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVR 306 (537)
T ss_pred hhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECC----CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhc
Confidence 467788999999999999999988999999999999875 6789999999999999999999999999886543222
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
...++++||.+++|||++++++++.|.+.+ +..++|.||+||++.+++..... ......++|+|++++.++
T Consensus 307 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~--------~~~~~~~vG~p~~~~~~~ 377 (537)
T PRK13382 307 NRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATPAD--------LRAAPDTAGRPAEGTEIR 377 (537)
T ss_pred ccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecChhH--------hccCCCCccccCcCcEEE
Confidence 223356899999999999999999999988 56799999999998765532210 112456899999999999
Q ss_pred EecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 164 LVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 164 i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
++|+++. .++.|||+++|++++.||+ ++.+.. | .++||+|||+++++++|+++|+||+
T Consensus 378 i~d~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~----------------~~g~~~TGDl~~~~~~g~l~~~GR~ 438 (537)
T PRK13382 378 ILDQDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F----------------HDGFMASGDVGYLDENGRLFVVGRD 438 (537)
T ss_pred EECCCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c----------------cCCCEeeCceEEEeCCCcEEEeccc
Confidence 9987663 4567999999999999998 444332 2 2579999999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
||+||++|++|+|.|||..|.+||+|.+++|++.++...++.+++++++.+... ...++++++++++|+.|++|..+
T Consensus 439 dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~---~~~~~l~~~l~~~l~~~~~P~~i 515 (537)
T PRK13382 439 DEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGAS---ATPETLKQHVRDNLANYKVPRDI 515 (537)
T ss_pred cceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCC---CCHHHHHHHHHHhccCCCCCcEE
Confidence 999999999999999999999999999999999888766778899998865432 22468999999999999999999
Q ss_pred EEcCCcCCCCCCCcchhhhcc
Q 002615 321 VFMDSLPMTSSGKVDYASLSA 341 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~~ 341 (900)
++++++|+|++||++|++|++
T Consensus 516 ~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 516 VVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEeccCCCCCCCCCcHHhhCC
Confidence 999999999999999999874
No 33
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.6e-41 Score=386.90 Aligned_cols=316 Identities=18% Similarity=0.206 Sum_probs=241.9
Q ss_pred ccCCCC-CCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLH-GEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~-~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++ ++|++++++|++|++++..++.+++.|+++++.+......+|..+++.++++++|++..+|.++..+......
T Consensus 186 ~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~ 265 (525)
T PRK05851 186 ARVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARR 265 (525)
T ss_pred HHhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcc
Confidence 356787 8999999999999999998999999999999985433445788999999999999886655555554432221
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhC-----CCceEEeecCccccccccceecccCCcc---cc--c-cCCCCc
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLF-----PNISILNLYGSTEVSGDCTYFDCKRLPS---IL--E-MSTLKS 150 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~---~~--~-~~~~~~ 150 (900)
.....+++||.+++|||++++++.+.|.+.+ +..+++|.||+||+++.++......... .. . ......
T Consensus 266 -~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (525)
T PRK05851 266 -VSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRH 344 (525)
T ss_pred -ccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCccccee
Confidence 1123468999999999999999999888742 2346999999999987655422110000 00 0 011234
Q ss_pred ceeeeccCCcEEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceE
Q 002615 151 VPIGLPISNCDIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFA 226 (900)
Q Consensus 151 ~~~G~p~~~~~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~ 226 (900)
.++|+|+++++++|+|+++ +.++.|||+|+|++++.||+++|+.+ .++||+|||+|
T Consensus 345 ~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~--------------------~~~~~~TGDl~ 404 (525)
T PRK05851 345 AVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID--------------------PDDWFPTGDLG 404 (525)
T ss_pred eeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC--------------------CCCceeccceE
Confidence 6799999999999998664 23567999999999999999988532 25799999999
Q ss_pred EEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHH
Q 002615 227 RRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSW 306 (900)
Q Consensus 227 ~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~ 306 (900)
+++ +|.|+|+||+||+||++|+||+|.|||++|.+||.|.+++|++.++...++...++++........ ++++++
T Consensus 405 ~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~ 479 (525)
T PRK05851 405 YLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDE----AGARSE 479 (525)
T ss_pred EEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcch----HHHHHH
Confidence 986 799999999999999999999999999999999999999999887665555555555443221122 234455
Q ss_pred HHhhCCCC--ccCCEEEEcC--CcCCCCCCCcchhhhccccc
Q 002615 307 VSSKLPLA--MIPNRFVFMD--SLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 307 l~~~l~~~--~~P~~~~~v~--~lP~t~~GKidr~~L~~~~~ 344 (900)
++++|+.+ ++|..+++++ +||+|++|||+|++|++..+
T Consensus 480 ~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~ 521 (525)
T PRK05851 480 VVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLE 521 (525)
T ss_pred HHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHH
Confidence 55555555 8999999998 89999999999999986543
No 34
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.4e-40 Score=384.91 Aligned_cols=312 Identities=22% Similarity=0.312 Sum_probs=265.1
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.++++++|+++..+|++|.+++.. ++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|++.....
T Consensus 218 ~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 293 (537)
T PLN02246 218 NLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP----KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVE 293 (537)
T ss_pred ccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC----CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcccc
Confidence 578899999999999999999855 778899999999996 468899999999999999999999999887643322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
. ..++++|.+++||+++++++.+.+.+.++++.+++.||+||++.+++....... ........++|+|++++++
T Consensus 294 ~--~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~----~~~~~~~~~~G~~~~~~~~ 367 (537)
T PLN02246 294 K--YDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAK----EPFPVKSGSCGTVVRNAEL 367 (537)
T ss_pred c--cCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCC----CCccccCCccccccCCcEE
Confidence 1 336899999999999999999999999989999999999999876543211000 0011234578999999999
Q ss_pred EEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 163 VLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 163 ~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
+++|++. +.++.|||+++|+.++.||+++|+.+...|. .++||+|||+++++++|.++++|
T Consensus 368 ~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~---------------~~~~~~TGD~~~~~~~g~l~~~G 432 (537)
T PLN02246 368 KIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTID---------------KDGWLHTGDIGYIDDDDELFIVD 432 (537)
T ss_pred EEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhhccc---------------CCCCeeecceEEEeCCCeEEEEe
Confidence 9998532 3566799999999999999999998877652 26799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.||+||++|+||+|.+||+.|.+||.|.+++|++.++...+..++++++..+..... .++|+++++++|+.|++|.
T Consensus 433 R~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~ 509 (537)
T PLN02246 433 RLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEIT---EDEIKQFVAKQVVFYKRIH 509 (537)
T ss_pred cccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCC---HHHHHHHHHhhCcCccccc
Confidence 9999999999999999999999999999999999988776667788888876553322 3689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhcccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
.++++++||+|++||++|++|++.+
T Consensus 510 ~i~~~~~~P~t~~GKi~r~~L~~~~ 534 (537)
T PLN02246 510 KVFFVDSIPKAPSGKILRKDLRAKL 534 (537)
T ss_pred eEEEeccCCCCCcchhhHHHHHHHH
Confidence 9999999999999999999998754
No 35
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-40 Score=380.05 Aligned_cols=310 Identities=19% Similarity=0.217 Sum_probs=261.2
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.++++++|+++..+|++|..++...+..+..|+++++.+ ..++..+++.|+++++|++.++|+++..+........
T Consensus 189 ~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 264 (501)
T PRK13390 189 FYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAK----RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVR 264 (501)
T ss_pred HhCCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcC----CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhc
Confidence 467889999999999999999876666778899999886 5689999999999999999999999998876432211
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....++++|.++.||+++++++.+.+.+.+ +..+++.||+||+++++.... .. ......++|+|+++ .++
T Consensus 265 ~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~-------~~~~~~~~G~~~~g-~~~ 334 (501)
T PRK13390 265 TRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDS-PD-------WLAHPGSVGRSVLG-DLH 334 (501)
T ss_pred ccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecc-hh-------hccCCCCcCCcccc-eEE
Confidence 223467999999999999999999998877 678999999999986443211 10 01134578999999 689
Q ss_pred EecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 164 LVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 164 i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
++|+++ ++++.|||+|+|+.++.||+++|+.+.+.|.. ..++||+|||+|++++||.+++.||.
T Consensus 335 i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~-------------~~~~w~~tGDl~~~~~dg~l~~~gR~ 401 (501)
T PRK13390 335 ICDDDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHP-------------AHPFWTTVGDLGSVDEDGYLYLADRK 401 (501)
T ss_pred EECCCCCCCCCCCceEEEEecCCccccccCChhhhHHhhcc-------------CCCceEEcCceEEECCCCeEEEeecc
Confidence 998766 35678999999999999999999998877632 12579999999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
|++||++|+||+|.|||++|.+||.|.+++|++.++...++.+++++++.......+...++|+++++++||.|++|..+
T Consensus 402 ~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~ 481 (501)
T PRK13390 402 SFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSV 481 (501)
T ss_pred ccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEE
Confidence 99999999999999999999999999999999998877777888888877654333344578999999999999999999
Q ss_pred EEcCCcCCCCCCCcchhhhc
Q 002615 321 VFMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~ 340 (900)
+++++||+|++|||+|++|+
T Consensus 482 ~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 482 EFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred EEeccCCCCCccceehhhcC
Confidence 99999999999999999984
No 36
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6e-40 Score=380.33 Aligned_cols=308 Identities=19% Similarity=0.290 Sum_probs=262.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.+++.++|++++.+|++|..++ ..++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+......
T Consensus 231 ~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~ 306 (547)
T PRK13295 231 ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD----IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE 306 (547)
T ss_pred HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC----CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc
Confidence 35678899999999999999876 55899999999999986 56899999999999999999999999998875433
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
. ...+++||.+++|||++++.+.+.+.+.+ +++++|.||+||++.+++...... ......++|+|++++.
T Consensus 307 ~--~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~G~~~~~~~ 376 (547)
T PRK13295 307 S--GRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDP-------DERASTTDGCPLPGVE 376 (547)
T ss_pred c--CCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCc-------chhccCccccccCCcE
Confidence 2 23468999999999999999999999988 889999999999986544321110 0113457899999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++|+|+++ +.++.|||+|+|++++.||+++|+.+... .++||+|||+|+++++|.+++.|
T Consensus 377 v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~-----------------~~g~~~TGD~~~~~~~g~l~~~g 439 (547)
T PRK13295 377 VRVVDADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD-----------------ADGWFDTGDLARIDADGYIRISG 439 (547)
T ss_pred EEEECCCCCCCCCCCCCeEEEEcCcccccccCCccccccC-----------------CCCCeecceEEEEcCCceEEEEe
Confidence 99998766 34667999999999999999999887643 14699999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHh-hCCCCccC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSS-KLPLAMIP 317 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~P 317 (900)
|.||+||++|++|+|.+||++|.+++.|.+++|++.++...++.+++++++.+..... .+++++++++ .|+.|++|
T Consensus 440 R~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P 516 (547)
T PRK13295 440 RSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLD---FEEMVEFLKAQKVAKQYIP 516 (547)
T ss_pred ccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCC---HHHHHHHHHhccCccccCC
Confidence 9999999999999999999999999999999999988877777889999887653222 3578888886 79999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
..++++++||+|++||++|++|+++..
T Consensus 517 ~~i~~v~~lP~t~sgK~~r~~L~~~~~ 543 (547)
T PRK13295 517 ERLVVRDALPRTPSGKIQKFRLREMLR 543 (547)
T ss_pred cEEEEeccCCCCCCccccHHHHHHHHh
Confidence 999999999999999999999987553
No 37
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-40 Score=384.60 Aligned_cols=311 Identities=20% Similarity=0.329 Sum_probs=265.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.+++.++|++++.+|++|..++. .++.++..|+++++.+ ..++..+++.++++++|++.++|++++.++.....
T Consensus 224 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~ 299 (546)
T PRK08314 224 LWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP----RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGL 299 (546)
T ss_pred HhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC----CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCc
Confidence 356788999999999999999974 4889999999999996 46888999999999999999999999988754321
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
....++++|.+++|||++++++++.+.+.+ +.++++.||+||++..++..... .....++|+|+++++
T Consensus 300 --~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~---------~~~~~~~G~~~~g~~ 367 (546)
T PRK08314 300 --AERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD---------RPKLQCLGIPTFGVD 367 (546)
T ss_pred --cccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecccccccccceecCCCc---------CCCCCccCcccCCeE
Confidence 123467899999999999999999999988 68999999999998655432211 113467999999999
Q ss_pred EEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++++|++. +.+..|||+|+|+.++.||+++++.+.+.|... ++.+||+|||+|+++++|.++++
T Consensus 368 ~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~------------~~~~~~~TGDl~~~~~~g~l~~~ 435 (546)
T PRK08314 368 ARVIDPETLEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEI------------DGKRFFRTGDLGRMDEEGYFFIT 435 (546)
T ss_pred EEEEeCCCCcCCCCCCceEEEEECCchhccccCChhHhhhhhhhc------------CCCceEecCCEEEEcCCCcEEEE
Confidence 99998543 346679999999999999999999888877542 13579999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||+||+||++|+||+|.|||++|.++|+|.+++|++.++...++.+++++++++..... ...++++++++++|+.|++|
T Consensus 436 GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~-~~~~~l~~~~~~~l~~~~~P 514 (546)
T PRK08314 436 DRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGK-TTEEEIIAWAREHMAAYKYP 514 (546)
T ss_pred ecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCC-CCHHHHHHHHHHhcccCCCC
Confidence 99999999999999999999999999999999999988877778899999987653211 22368999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSAS 342 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~ 342 (900)
..++++++||+|++||++|++|++.
T Consensus 515 ~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 515 RIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred cEEEEecCCCCCCccceeHHHHHHH
Confidence 9999999999999999999999754
No 38
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-40 Score=392.94 Aligned_cols=313 Identities=17% Similarity=0.193 Sum_probs=252.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..+++.++|++++.+|++|.+++..++.+|+.|+++++.+ .++..+++.|+++++|+++++|++++.+.......
T Consensus 255 ~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~-----~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~ 329 (651)
T PLN02736 255 LSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQ-----GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNA 329 (651)
T ss_pred hccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeC-----CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHH
Confidence 4568889999999999999999988899999999999874 36788999999999999999999998886542110
Q ss_pred c--------------------------CC--------------CCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeec
Q 002615 83 H--------------------------NM--------------HVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLY 122 (900)
Q Consensus 83 ~--------------------------~~--------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~Y 122 (900)
. .. ...++||.+++||+++++++.+.+.+.+ ++.+++.|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~Y 408 (651)
T PLN02736 330 VKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGY 408 (651)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEe
Confidence 0 00 0014899999999999999999998877 68899999
Q ss_pred CccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCC-------CCCCCccEEEEccccccccccCCCCCC
Q 002615 123 GSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESD-------TVKPDEGEIYAGGLCLSNGYFSESTFM 195 (900)
Q Consensus 123 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~-------~~~~~~GEl~v~g~~~~~gY~~~~~~~ 195 (900)
|+||+++.++..... .....++|+|+++++++|+|.+ +.+++.|||+|+|++++.||+++|+.|
T Consensus 409 G~TE~~~~~~~~~~~---------~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t 479 (651)
T PLN02736 409 GMTETSCVISGMDEG---------DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQT 479 (651)
T ss_pred chHHhchheeccCCC---------CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHH
Confidence 999998765533211 1245679999999999999732 233456999999999999999999999
Q ss_pred ccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEe
Q 002615 196 PSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSH 274 (900)
Q Consensus 196 ~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~ 274 (900)
++.|. .++||+|||+|++++||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++.
T Consensus 480 ~~~~~---------------~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~ 544 (651)
T PLN02736 480 REVID---------------EDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD 544 (651)
T ss_pred Hhhhc---------------cCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec
Confidence 88773 2689999999999999999999999999998 7999999999999999999999999984
Q ss_pred ecCCceEEEEEEEEecCCC---------Cc---------hHHHHHHHHHHHH-----hhCCCCccCCEEEEcCCcC----
Q 002615 275 KHQGELVILVAFIVLKEKK---------TS---------SEIFLSSIKSWVS-----SKLPLAMIPNRFVFMDSLP---- 327 (900)
Q Consensus 275 ~~~~~~~~l~~~v~~~~~~---------~~---------~~~~~~~l~~~l~-----~~l~~~~~P~~~~~v~~lP---- 327 (900)
. .+..++|+|+++... .. .+...+.|.+.++ ..|+.|++|++|+++++.|
T Consensus 545 ~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 621 (651)
T PLN02736 545 S---LNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVEN 621 (651)
T ss_pred C---CCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCC
Confidence 2 244789999986421 00 0111122222222 2599999999999999886
Q ss_pred --CCCCCCcchhhhccccccccc
Q 002615 328 --MTSSGKVDYASLSASTSFTIS 348 (900)
Q Consensus 328 --~t~~GKidr~~L~~~~~~~~~ 348 (900)
+|++|||+|+++++.|+..++
T Consensus 622 ~~lT~~~Ki~R~~i~~~~~~~i~ 644 (651)
T PLN02736 622 GLLTPTFKVKRPQAKAYFAKAIS 644 (651)
T ss_pred CcCChhhhhhHHHHHHHHHHHHH
Confidence 799999999999987765544
No 39
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-40 Score=376.93 Aligned_cols=302 Identities=20% Similarity=0.265 Sum_probs=260.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++...|++|+.++..++.++..|+++++.+ ..++..+++.++++++|++.++|++++.+.+...
T Consensus 177 ~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-- 250 (487)
T PRK07638 177 HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMR----KFIPNQVLDKLETENISVMYTVPTMLESLYKENR-- 250 (487)
T ss_pred HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcC----CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC--
Confidence 4578899999999999999999989999999999999986 5789999999999999999999999999886521
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
. ..+.+.++++|+++++.+.+++.+.+|++++++.||+||++.++.... . .......++|+|++++.+
T Consensus 251 ---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~-------~~~~~~~~~G~~~~~~~~ 318 (487)
T PRK07638 251 ---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-E-------ESERRPNSVGRPFHNVQV 318 (487)
T ss_pred ---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-c-------ccCCCCCCCCcccCCcEE
Confidence 1 345667788999999999999999999999999999999987654322 1 112245689999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ ++++.|||+++|+.++.||+++++.+.+.+ .++||+|||+++++++|+++++||
T Consensus 319 ~i~d~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~----------------~~g~~~TGDl~~~d~~g~l~i~GR 382 (487)
T PRK07638 319 RICNEAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN----------------ADGWMTVRDVGYEDEEGFIYIVGR 382 (487)
T ss_pred EEECCCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc----------------cCCcEecCccEeEcCCCeEEEEec
Confidence 9998766 356679999999999999999887655432 368999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+||+||++|++|+|.|||++|.+||.|.+++|++..++..+..++++++.. ...+++++++++.|+.|++|..
T Consensus 383 ~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~-------~~~~~l~~~~~~~l~~~~~p~~ 455 (487)
T PRK07638 383 EKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGS-------ATKQQLKSFCLQRLSSFKIPKE 455 (487)
T ss_pred CCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECC-------CCHHHHHHHHHHHhhcccCCcE
Confidence 999999999999999999999999999999999988776666778877642 2246899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhcccccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++++++||+|++||++|++|++++..
T Consensus 456 i~~v~~iP~t~~GKv~r~~L~~~~~~ 481 (487)
T PRK07638 456 WHFVDEIPYTNSGKIARMEAKSWIEN 481 (487)
T ss_pred EEEecccCCCCcccccHHHHHHHHhc
Confidence 99999999999999999999876543
No 40
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-40 Score=375.68 Aligned_cols=306 Identities=20% Similarity=0.276 Sum_probs=263.8
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.++++++|+++..+|++|..++.. ++.++..|+++++++ ..++..+++.++++++|++.++|++++.++......
T Consensus 184 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 259 (496)
T PRK06839 184 AIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPR----KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE 259 (496)
T ss_pred HcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEcc----CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc
Confidence 457889999999999999988755 678899999999885 578999999999999999999999999998754322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+++++|.+++||+++++++.+.+.+. ++++++.||+||++..++...... ......++|+|++++.+
T Consensus 260 --~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~-------~~~~~~~~G~p~~~~~~ 328 (496)
T PRK06839 260 --TTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEED-------ARRKVGSIGKPVLFCDY 328 (496)
T ss_pred --cCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEeccccc-------ccccCCCCcccCCCceE
Confidence 2347899999999999999999999886 789999999999986544322111 11245679999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.++.|||+|+|+.++.||+++++.+...| .++||+|||+++++++|.++++||
T Consensus 329 ~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~----------------~~g~~~TGDl~~~~~~g~~~~~GR 392 (496)
T PRK06839 329 ELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI----------------QDGWLCTGDLARVDEDGFVYIVGR 392 (496)
T ss_pred EEECCCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH----------------cCCCeeecceEEEcCCCcEEEecc
Confidence 9998766 346679999999999999999998877665 257999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
.||+||.+|++|+|.+||++|.++|.|.+++|++.++...+..+++++++++..... .++|++++++.|+.+++|..
T Consensus 393 ~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~ 469 (496)
T PRK06839 393 KKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLI---EKDVIEHCRLFLAKYKIPKE 469 (496)
T ss_pred ccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCcE
Confidence 999999999999999999999999999999999998887777899999987654332 36899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhcccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
+++++++|+|++||++|++|+++.
T Consensus 470 ~~~v~~~P~t~~GKi~r~~l~~~~ 493 (496)
T PRK06839 470 IVFLKELPKNATGKIQKAQLVNQL 493 (496)
T ss_pred EEEeccCCCCccccccHHHHHHHh
Confidence 999999999999999999998654
No 41
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.7e-40 Score=368.90 Aligned_cols=294 Identities=20% Similarity=0.240 Sum_probs=240.8
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++.+ ++.+.++|++|.+++..++.+|+.|+++++.+... +.........+++|++.++|++++.+++..
T Consensus 155 ~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~----~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---- 225 (452)
T PRK07445 155 YFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKR----LKSGQELPPNPSDFFLSLVPTQLQRLLQLR---- 225 (452)
T ss_pred HhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHh----ccchhhhhhhcCceEEEehHHHHHHHHhhC----
Confidence 355654 46788999999999988999999999999985221 111223335788999999999999987631
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
...+++||.+++||+++++++.+.+.+ + ++++++.||+||++..++...... ......++|+|+++++++
T Consensus 226 -~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~G~~~p~~~v~ 295 (452)
T PRK07445 226 -PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDD-------FLAGNNSSGQVLPHAQIT 295 (452)
T ss_pred -hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchh-------hccCCCcCCccCCCCeEE
Confidence 123679999999999999999988875 3 789999999999876543321110 011345789999999999
Q ss_pred EecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCc
Q 002615 164 LVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRT 243 (900)
Q Consensus 164 i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ 243 (900)
|+ .++.|||+|+|+.++.||++++.. .++||+|||+|++++||+++|.||+||+
T Consensus 296 i~-----~g~~Gel~v~g~~~~~gY~~~~~~---------------------~~g~~~TGDl~~~d~dG~l~~~GR~dd~ 349 (452)
T PRK07445 296 IP-----ANQTGNITIQAQSLALGYYPQILD---------------------SQGIFETDDLGYLDAQGYLHILGRNSQK 349 (452)
T ss_pred Ec-----CCCcceEEEeCCccchhhcCCccC---------------------CCCEEECCCEEEEcCCCCEEEEeecCCE
Confidence 97 346799999999999999975321 2579999999999999999999999999
Q ss_pred EEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEc
Q 002615 244 IKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFM 323 (900)
Q Consensus 244 ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v 323 (900)
||++|+||+|.|||++|.+||.|.+|+|++.+++..++.++++++.++... ..++++++++++|+.|++|..++++
T Consensus 350 I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~----~~~~l~~~~~~~L~~~~~P~~i~~v 425 (452)
T PRK07445 350 IITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSI----SLEELKTAIKDQLSPFKQPKHWIPV 425 (452)
T ss_pred EEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCCC----CHHHHHHHHHHhCCcccCCeEEEEe
Confidence 999999999999999999999999999999988777778899998765432 2368999999999999999999999
Q ss_pred CCcCCCCCCCcchhhhccccccc
Q 002615 324 DSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 324 ~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
++||+|++||++|++|++++..+
T Consensus 426 ~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 426 PQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred cCCCCCCCcccCHHHHHHHHHHh
Confidence 99999999999999998876544
No 42
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-40 Score=376.22 Aligned_cols=308 Identities=20% Similarity=0.280 Sum_probs=265.6
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.+++..+|+++...|++|.+++.. .+.++..|+++++.+ ..++..+++.++++++|++.++|++++.++......
T Consensus 184 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~ 259 (497)
T PRK06145 184 ALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR----EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRD 259 (497)
T ss_pred hhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC----cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcc
Confidence 467899999999999999988754 678899999999986 578999999999999999999999999988654322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++|||++++.+++.+.+.|++..+++.||+||++..++...... ......++|+|++++++
T Consensus 260 --~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-------~~~~~~~~G~~~~~~~~ 330 (497)
T PRK06145 260 --RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGR-------EIEKIGSTGRALAHVEI 330 (497)
T ss_pred --ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCcc-------ccccCCCcccCCCCceE
Confidence 234678999999999999999999999998899999999999997665432211 01134578999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++++++ +.+..|||+++|+.++.||+++++.+.+.|. ++||+|||+++++++|+++++||
T Consensus 331 ~i~~~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~----------------~~~~~TGDl~~~~~~g~l~~~GR 394 (497)
T PRK06145 331 RIADGAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFY----------------GDWFRSGDVGYLDEEGFLYLTDR 394 (497)
T ss_pred EEECCCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHHh----------------CCCeeccceEEEcCCCcEEEecc
Confidence 9998765 3456799999999999999999999888772 47999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+||+||++|++|+|.+||+.|.++|+|.+++|++..+...++.+++++++....... .++|+++++++|+.|++|..
T Consensus 395 ~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~ 471 (497)
T PRK06145 395 KKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLT---LEALDRHCRQRLASFKVPRQ 471 (497)
T ss_pred ccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCCE
Confidence 999999999999999999999999999999999988876667788888886543222 36899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhcccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
++++++||+|++||++|++|+++.
T Consensus 472 i~~v~~iP~t~~GKi~r~~l~~~~ 495 (497)
T PRK06145 472 LKVRDELPRNPSGKVLKRVLRDEL 495 (497)
T ss_pred EEEeccCCCCCcccccHHHHHHHh
Confidence 999999999999999999998753
No 43
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-40 Score=380.10 Aligned_cols=318 Identities=20% Similarity=0.312 Sum_probs=263.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++.++|++++.+|++|..++.. ++.+++.|+++++++. ...++..+++.++++++|++.++|++++.+......
T Consensus 210 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 287 (534)
T PRK05852 210 TGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPAR--GRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAAT 287 (534)
T ss_pred HHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCC--cCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccc
Confidence 3567889999999999999999865 7888899999888642 246788999999999999999999999999876543
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.......+++|.++++|+++++.+++.+.+.+ +.++++.||+||++..++......... ...........|+ .+++.
T Consensus 288 ~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~-~~~~~~~~g~~g~-~~g~~ 364 (534)
T PRK05852 288 EPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQ-TENPVVSTGLVGR-STGAQ 364 (534)
T ss_pred ccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCcccccc-ccCcccccccCCC-CCCCe
Confidence 22223467999999999999999999999988 789999999999987655332211000 0000112223343 68999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++|+++ ++++.|||+|+|+.+++||+++++.+.+.| .++||+|||++++++||++++.|
T Consensus 365 ~~i~d~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~----------------~~g~~~TGD~~~~d~dG~l~~~g 428 (534)
T PRK05852 365 IRIVGSDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF----------------TDGWLRTGDLGSLSAAGDLSIRG 428 (534)
T ss_pred EEEECCCCCCCCCCCceEEEEecCcccchhcCCcccchhhh----------------cCCCcccCceEEEeCCCcEEEEe
Confidence 99998776 346679999999999999999999998776 24799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|+||+||++|.+|+|.+||++|.++|.|.+|+|++.++...++.++++++.++.... ..++|.++++++||.+++|.
T Consensus 429 R~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~---~~~~i~~~~~~~l~~~~~P~ 505 (534)
T PRK05852 429 RIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPP---TAEELVQFCRERLAAFEIPA 505 (534)
T ss_pred cchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCC---CHHHHHHHHHHhcccccCCe
Confidence 999999999999999999999999999999999999887777788888887654322 23689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
.++++++||+|++||++|++|++.+.
T Consensus 506 ~i~~v~~iP~t~~GKi~r~~L~~~~~ 531 (534)
T PRK05852 506 SFQEASGLPHTAKGSLDRRAVAEQFG 531 (534)
T ss_pred EEEEhhhcCCCCCccccHHHHHHHhc
Confidence 99999999999999999999987664
No 44
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.7e-39 Score=373.75 Aligned_cols=321 Identities=24% Similarity=0.398 Sum_probs=267.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++...|++|+.++..++.+++.|+++++.+ .....++..+++.++++++|.+.++|++++.++.....
T Consensus 175 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~- 252 (502)
T TIGR01734 175 ADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLD-KDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF- 252 (502)
T ss_pred HhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcC-HHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc-
Confidence 3478889999999999999999999999999999999985 33456899999999999999999999999877644221
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
....++++|.++++|+++++.+.+.+.+.+|++++++.||+||+++.++....... ........++|+|++++++
T Consensus 253 -~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~----~~~~~~~~~vg~~~~~~~~ 327 (502)
T TIGR01734 253 -NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQE----ILDQYPRLPIGFAKPDMNL 327 (502)
T ss_pred -ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEcccc----ccccCCccccccccCCCEE
Confidence 12346899999999999999999999999999999999999999765543321110 1112244679999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+++++ ++++.|||+++|+.++.||+++++.+.+.|... .+.+||+|||+|+++++ +++++||
T Consensus 328 ~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~------------~~~~~~~TGDlg~~~~~-~l~i~GR 394 (502)
T TIGR01734 328 FIMDEEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSH------------EGQPAYRTGDAGTITDG-QLFYQGR 394 (502)
T ss_pred EEECCCCCCCCCCCeeEEEEccccccccccCCcccchHhheeC------------CCcEEEECCCEEEEECC-EEEEecc
Confidence 9998765 345679999999999999999999888777431 24579999999999976 9999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEee-cCCceEEEEEEEEecCCCCch-HHHHHHHHHHHHhhCCCCccC
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHK-HQGELVILVAFIVLKEKKTSS-EIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~-~~~~~~~l~~~v~~~~~~~~~-~~~~~~l~~~l~~~l~~~~~P 317 (900)
.+|+||++|++|+|.+||+.+.++|.|.++++++.. .......+++++++....... .....++++.++++||.+++|
T Consensus 395 ~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P 474 (502)
T TIGR01734 395 LDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIP 474 (502)
T ss_pred ccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCC
Confidence 999999999999999999999999999999999865 444556788888876543322 233478999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
..++++++||+|++|||+|++|+++.
T Consensus 475 ~~~~~v~~lP~t~~gKv~r~~l~~~~ 500 (502)
T TIGR01734 475 RKFIYRDQLPLTANGKIDRKALAEEV 500 (502)
T ss_pred cEEEEccccCCCCCCcccHHHHHHhh
Confidence 99999999999999999999998754
No 45
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.1e-40 Score=377.53 Aligned_cols=311 Identities=18% Similarity=0.244 Sum_probs=255.5
Q ss_pred CCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC
Q 002615 5 YPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN 84 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~ 84 (900)
++...+|+++..+|++|+.++..++.+++.|+++++.+ .++..+++.|+++++|++.++|++++.+.......
T Consensus 209 ~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~-- 281 (540)
T PRK05857 209 VTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA-- 281 (540)
T ss_pred cccccCceeeecCCccccchHHHHHHHhhcceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhccccC--
Confidence 46677899999999999999988999999999987753 47788999999999999999999999998754322
Q ss_pred CCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEE
Q 002615 85 MHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVL 164 (900)
Q Consensus 85 ~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 164 (900)
..+++++|.+++||++++....+ +.+.+ ++++++.||+||++..+........ ........++|+|+++++++|
T Consensus 282 ~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~----~~~~~~~~~~G~~~~g~~v~i 355 (540)
T PRK05857 282 NATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCTALCLPTDDG----SIVKIEAGAVGRPYPGVDVYL 355 (540)
T ss_pred CCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCceeeecccccc----cccccccCCcCcccCCcEEEE
Confidence 23478999999999999987765 44555 7899999999999864332211110 001113467999999999999
Q ss_pred ecCCCC---------CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEE
Q 002615 165 VESDTV---------KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLV 235 (900)
Q Consensus 165 ~d~~~~---------~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~ 235 (900)
+|+++. .++.|||+|+|+.++.||+++++.+.+.|. ++||+|||+|+++++|+++
T Consensus 356 ~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~----------------~g~~~TGDlg~~d~~g~l~ 419 (540)
T PRK05857 356 AATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLI----------------DGWVNTGDLLERREDGFFY 419 (540)
T ss_pred ECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcC----------------CCceeccceEEEcCCceEE
Confidence 986542 245699999999999999999998888772 4699999999999999999
Q ss_pred EEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc--hHHHHHHHHHHHHhhCCC
Q 002615 236 FLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS--SEIFLSSIKSWVSSKLPL 313 (900)
Q Consensus 236 ~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~--~~~~~~~l~~~l~~~l~~ 313 (900)
++||.||+||++|++|+|.|||.+|..||.|.+|+|++.++...++.++++++....... .+.+.+.+++.+++.++.
T Consensus 420 ~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~ 499 (540)
T PRK05857 420 IKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEP 499 (540)
T ss_pred EeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999998877666677777776543221 223445677777888999
Q ss_pred CccCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 314 AMIPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 314 ~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
|++|..++++++||+|++||+||++|++...
T Consensus 500 ~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~ 530 (540)
T PRK05857 500 MARPSTIVIVTDIPRTQSGKVMRASLAAAAT 530 (540)
T ss_pred ccCCeEEEEhhcCCCCCCcceeHHHHHHhhh
Confidence 9999999999999999999999999987654
No 46
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-39 Score=381.95 Aligned_cols=319 Identities=19% Similarity=0.187 Sum_probs=255.2
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.++++++|++++.+|++|+++.+.++.+|+.|+++++++. ..++..+++++++++||++.++|++++.+.+....
T Consensus 391 ~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g---~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~-- 465 (728)
T PLN03052 391 HLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNG---SPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCM-- 465 (728)
T ss_pred hcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCC---CCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCc--
Confidence 3688999999999999999999889999999999999853 23455799999999999999999999998765321
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
...++++||.+++|||+++++....+.+.++...++|.||+||+++.+..... . ......++|.|+++++++
T Consensus 466 ~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~--~------~~~~~g~~g~p~~g~~v~ 537 (728)
T PLN03052 466 AGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSL--L------QPQAFAAFSTPAMGCKLF 537 (728)
T ss_pred ccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCC--C------CCCCCCccccCCCCceEE
Confidence 22457899999999999999988887777654679999999999764332111 0 011346789999999999
Q ss_pred EecCCCCC---C--CccEEEEcccc--ccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 164 LVESDTVK---P--DEGEIYAGGLC--LSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 164 i~d~~~~~---~--~~GEl~v~g~~--~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
|+|+++.+ + +.|||+++++. ...+|++++. ....|...+. ..+++||+|||++++++||+++|
T Consensus 538 v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~---------~~g~~~~~tGDl~~~d~dG~l~i 607 (728)
T PLN03052 538 ILDDSGNPYPDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPV---------FNGKILRRHGDIFERTSGGYYRA 607 (728)
T ss_pred EECCCCCCCCCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCC---------CCCCEEEecCceEEECCCCeEEE
Confidence 99977642 3 25999998653 3456777642 3333322111 12356999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHh-CCCCeeEEEEEEeecCCce-EEEEEEEEec--CCCC-chHHHHHHHHHHHHhhC
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLR-GHPDVVDTAVVSHKHQGEL-VILVAFIVLK--EKKT-SSEIFLSSIKSWVSSKL 311 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~l~~~v~~~--~~~~-~~~~~~~~l~~~l~~~l 311 (900)
+||.||+||++|+||+|.|||++|. .||.|.+++|++.+++..+ +.+++||+++ ++.. ..+.+.+.+++.++++|
T Consensus 608 ~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l 687 (728)
T PLN03052 608 HGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKL 687 (728)
T ss_pred EecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999995 7999999999999887554 7899999987 3332 23566777888899999
Q ss_pred CCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 312 PLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 312 ~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+++++|..|+++++||+|++|||+|++|++.+..
T Consensus 688 ~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 688 NPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred CCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999876543
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.9e-39 Score=374.52 Aligned_cols=304 Identities=23% Similarity=0.350 Sum_probs=259.2
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH--HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ--EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~--~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
+.+.++++|+++..+|++|.+++. .++.++..|+++++.+ ..++..+++.++++++|++.++|++++.++....
T Consensus 217 ~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 292 (527)
T TIGR02275 217 EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP----DPSPTDCFPLIERHKVTVTALVPPAVALWMQAAS 292 (527)
T ss_pred hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC----CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCcc
Confidence 356788999999999999998875 4788999999999975 4688999999999999999999999998887654
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccC-C
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPIS-N 159 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~-~ 159 (900)
.. ...+++||.+++||+++++.+.+.+.+.+ ++++++.||+||++...+... . .......++|+|++ +
T Consensus 293 ~~--~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~--~------~~~~~~~~~G~~~~~~ 361 (527)
T TIGR02275 293 KS--RYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTRLD--D------PAEIIFTTQGRPMSPD 361 (527)
T ss_pred cc--CCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccCCC--C------ccccccccCCCCCCCC
Confidence 32 23468999999999999999999999888 789999999999754332211 0 01123457899994 7
Q ss_pred cEEEEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 160 CDIVLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 160 ~~~~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
..++++|+++. +++.|||+++|+.++.||+++++.+.+.|. .++||+|||+++++++|++++
T Consensus 362 ~~v~i~d~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~---------------~dg~~~TGDl~~~~~~g~l~~ 426 (527)
T TIGR02275 362 DEVRVVDDHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFD---------------AEGFYYTGDLVRLTPEGYIVV 426 (527)
T ss_pred ceEEEECCCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcC---------------cCCCEEcCceEEEcCCccEEE
Confidence 89999987653 567799999999999999999998877663 367999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-CCCCc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK-LPLAM 315 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~-l~~~~ 315 (900)
+||.||+||++|++|+|.+||++|.+||.|.+++|++.++...++.++++++++.... ...+|+++++++ +|.++
T Consensus 427 ~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~----~~~~l~~~l~~~~l~~~~ 502 (527)
T TIGR02275 427 VGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPAL----KAAQLRRFLRERGLAEYK 502 (527)
T ss_pred EecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCCC----CHHHHHHHHHhCCCcccc
Confidence 9999999999999999999999999999999999999988877778899998765432 236899999885 99999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~ 340 (900)
+|..++++++||+|++||++|++|+
T Consensus 503 ~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 503 LPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred CCCEEEEeccCCCCCccceeHHhcC
Confidence 9999999999999999999999874
No 48
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-39 Score=369.34 Aligned_cols=301 Identities=23% Similarity=0.326 Sum_probs=258.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.+++.++|+++..+|++|..++. .++.++..|+++++.+ ..++..+++.++ +++|++.++|+++..+.+....
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~ 236 (471)
T PRK07787 162 EAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG----RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA 236 (471)
T ss_pred HhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC----CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc
Confidence 457788999999999999998875 4899999999999886 578999999999 9999999999999988864221
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
...++++|.++.||+++++.+++.|.+.+ +.++++.||+||++..++... . ......++|+|++++.
T Consensus 237 ---~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~--~-------~~~~~~~vG~~~~g~~ 303 (471)
T PRK07787 237 ---ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRA--D-------GERRPGWVGLPLAGVE 303 (471)
T ss_pred ---cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCC--C-------CcccCCcccccCCCcE
Confidence 12367899999999999999999999877 788999999999976433211 1 1123457999999999
Q ss_pred EEEecCCCCC----C-CccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 162 IVLVESDTVK----P-DEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 162 ~~i~d~~~~~----~-~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
++|+|+++.+ + ..|||+++|+.++.||+++++.+.+.|.. ++||+|||+|++++||.+++
T Consensus 304 ~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~---------------~~~~~TGDlg~~~~dg~l~~ 368 (471)
T PRK07787 304 TRLVDEDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTA---------------DGWFRTGDVAVVDPDGMHRI 368 (471)
T ss_pred EEEECCCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccC---------------CCceecCceEEEcCCCCEEE
Confidence 9999876532 2 26999999999999999999998877732 57999999999999999999
Q ss_pred Eccc-CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCc
Q 002615 237 LGRK-DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAM 315 (900)
Q Consensus 237 ~GR~-dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 315 (900)
+||+ |++||++|++|+|.+||++|.+++.|.+++|++.++...++.+++++++... ...+++++++++.|+.++
T Consensus 369 ~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~-----~~~~~l~~~l~~~l~~~~ 443 (471)
T PRK07787 369 VGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADD-----VAADELIDFVAQQLSVHK 443 (471)
T ss_pred eCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCC-----CCHHHHHHHHHhhccccc
Confidence 9996 8999999999999999999999999999999998887777889999987332 123578999999999999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhcc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSA 341 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~ 341 (900)
+|..++++++||+|++||++|++|++
T Consensus 444 ~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 444 RPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred CCcEEEEeccCCCCCCccccHHHhcc
Confidence 99999999999999999999999975
No 49
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-39 Score=372.49 Aligned_cols=304 Identities=23% Similarity=0.359 Sum_probs=259.8
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.++++++|++++.+|++|..++..++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.......
T Consensus 176 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~- 250 (483)
T PRK03640 176 NLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE----KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG- 250 (483)
T ss_pred hcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC----CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-
Confidence 468899999999999999999988999999999999986 578999999999999999999999999988654322
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....+||.+++||+++++.+++.+.+. ++++++.||+||++..+....... ......++|+|+++++++
T Consensus 251 --~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~-------~~~~~~~vG~p~~~~~~~ 319 (483)
T PRK03640 251 --TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPED-------ALTKLGSAGKPLFPCELK 319 (483)
T ss_pred --ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCccc-------ccccCCCcccccCCcEEE
Confidence 224689999999999999999988774 789999999999875433222111 112456899999999999
Q ss_pred EecCCC--CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccC
Q 002615 164 LVESDT--VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKD 241 (900)
Q Consensus 164 i~d~~~--~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~d 241 (900)
+.++.. +.+..|||+++|+.++.||+++++.+...| .++||+|||++++++||.++++||+|
T Consensus 320 i~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~----------------~~~~~~tGDl~~~~~~g~l~~~GR~~ 383 (483)
T PRK03640 320 IEKDGVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF----------------QDGWFKTGDIGYLDEEGFLYVLDRRS 383 (483)
T ss_pred EecCCCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH----------------hcCCeeccceEEEcCCCCEEEeeccc
Confidence 987532 345679999999999999999998888776 25799999999999999999999999
Q ss_pred CcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEE
Q 002615 242 RTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFV 321 (900)
Q Consensus 242 d~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~ 321 (900)
|+||++|.+|+|.+||+.+.+++.|.++++++..++..+..++++++..... ..+++++++++.|+.|++|..|+
T Consensus 384 ~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~l~~~~~p~~i~ 458 (483)
T PRK03640 384 DLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEV-----TEEELRHFCEEKLAKYKVPKRFY 458 (483)
T ss_pred CeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCC-----CHHHHHHHHHHhccCCCCCcEEE
Confidence 9999999999999999999999999999999887766666777777754322 23578999999999999999999
Q ss_pred EcCCcCCCCCCCcchhhhccccc
Q 002615 322 FMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 322 ~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++++||+|++||++|++|++++.
T Consensus 459 ~~~~iP~t~~gK~~r~~l~~~~~ 481 (483)
T PRK03640 459 FVEELPRNASGKLLRHELKQLVE 481 (483)
T ss_pred EeCCCCCCCccceeHHHHHHHHh
Confidence 99999999999999999987654
No 50
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.5e-39 Score=373.87 Aligned_cols=309 Identities=21% Similarity=0.322 Sum_probs=262.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH--HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ--EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~--~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
+.++++++|++++.+|++|.+++. .++.+|..|+++++.+ ..++..++++++++++|++.++|++++.++....
T Consensus 216 ~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~ 291 (536)
T PRK10946 216 EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP----DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIA 291 (536)
T ss_pred HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC----CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhc
Confidence 467889999999999999988764 5788999999999886 5678889999999999999999999999987643
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeecc-CC
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPI-SN 159 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~ 159 (900)
.......+++||.+++||+++++.+.+.+.+.+ ++++++.||+||++..++... . + ......++|+|+ ++
T Consensus 292 ~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~--~-~-----~~~~~~~~G~p~~~~ 362 (536)
T PRK10946 292 EGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTRLD--D-S-----DERIFTTQGRPMSPD 362 (536)
T ss_pred ccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeecCC--C-c-----cccccccCCcccCCC
Confidence 333334467999999999999999999998888 789999999999764332211 1 0 111345789999 78
Q ss_pred cEEEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 160 CDIVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 160 ~~~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+.++++|+++ +.++.|||+++|+.++.||+++++.+.+.|.. ++||+|||+++++++|++++
T Consensus 363 ~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~---------------d~~~~TGDl~~~d~~G~l~~ 427 (536)
T PRK10946 363 DEVWVADADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDA---------------NGFYCSGDLVSIDPDGYITV 427 (536)
T ss_pred ceEEEECCCCCCCCCCCccEEEEecCccchhhcCCcccchhhccc---------------CCceecCceEEECCCCcEEE
Confidence 9999998665 35677999999999999999999998887743 67999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-CCCCc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK-LPLAM 315 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~-l~~~~ 315 (900)
+||.||+||++|++|+|.+||+.|.+||+|.+++|++.++...++.+++++++++. . ..+++++++++. +|.|+
T Consensus 428 ~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-~----~~~~l~~~~~~~~l~~~~ 502 (536)
T PRK10946 428 VGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP-L----KAVQLRRFLREQGIAEFK 502 (536)
T ss_pred eccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC-C----CHHHHHHHHHhCCccccc
Confidence 99999999999999999999999999999999999998887667788898887654 2 235788899876 99999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+|..+++++++|+|++||++|++|+++..
T Consensus 503 ~P~~~~~~~~iP~t~~GKv~r~~L~~~~~ 531 (536)
T PRK10946 503 LPDRVECVDSLPLTAVGKVDKKQLRQWLA 531 (536)
T ss_pred cCcEEEEeccCCCCCCCcccHHHHHHHHH
Confidence 99999999999999999999999987654
No 51
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2e-39 Score=386.15 Aligned_cols=310 Identities=18% Similarity=0.224 Sum_probs=250.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|++++.+|++|.+++. .++.+|..|+++++.+. ..++..+.+.++++++|++.++|+++..+.+..
T Consensus 399 ~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-- 473 (718)
T PRK08043 399 TIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPS---PLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA-- 473 (718)
T ss_pred HhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCC---cccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--
Confidence 356889999999999999999875 48899999999998752 245677889999999999999999998776532
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
...++++||.+++|||++++++.+.+.+.+ ++++++.||+||++..++.... ......++|+|+++++
T Consensus 474 --~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~---------~~~~~~svG~p~pg~~ 541 (718)
T PRK08043 474 --NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINVP---------MAAKPGTVGRILPGMD 541 (718)
T ss_pred --CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecCC---------cccCCCCCCCcCCCCe
Confidence 113468999999999999999999999888 7899999999999876543211 0114568999999999
Q ss_pred EEEecCCCCCCCccEEEEccccccccccCC--CCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 162 IVLVESDTVKPDEGEIYAGGLCLSNGYFSE--STFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 162 ~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
++++|.++ .+..|||+++|++++.||+++ ++.+...+..... ....++||+|||+|++|+||+++|+||
T Consensus 542 ~~i~d~~~-~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~--------~~~~~gw~~TGDlg~~d~dG~l~i~GR 612 (718)
T PRK08043 542 ARLLSVPG-IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENAR--------GEMERGWYDTGDIVRFDEQGFVQIQGR 612 (718)
T ss_pred eEEecCCC-CCCceEEEEecCCccccccCCCCccccccccccccc--------ccccCCeEecCCEEEEcCCCcEEEEec
Confidence 99997654 345699999999999999983 4432211110000 001358999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-CCCCccCC
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK-LPLAMIPN 318 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~P~ 318 (900)
+||+||++|++|+|.|||+++.+|+.+.+++|++.++...++.+++++.. .. ...++++++++++ ||.|++|.
T Consensus 613 ~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~~---~~---~~~~~l~~~~~~~~l~~~~vP~ 686 (718)
T PRK08043 613 AKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTTD---SE---LTREKLQQYAREHGVPELAVPR 686 (718)
T ss_pred CCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEcC---cc---cCHHHHHHHHHhcCCCcccCCc
Confidence 99999999999999999999999998888888888777667777776642 11 1235789999887 99999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
.++++++||+|++|||||++|+++..
T Consensus 687 ~i~~v~~lP~t~~GKi~r~~L~~~~~ 712 (718)
T PRK08043 687 DIRYLKQLPLLGSGKPDFVTLKSMVD 712 (718)
T ss_pred eEEEecccCcCCCCCcCHHHHHHHHh
Confidence 99999999999999999999987654
No 52
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=6.7e-39 Score=371.04 Aligned_cols=304 Identities=19% Similarity=0.294 Sum_probs=258.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.+++.++|++++.+|++|..++ ..++.+++.|+++++.+ ..++..+++.++++++|++.++|+++..+......
T Consensus 229 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~ 304 (538)
T TIGR03208 229 ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQD----IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKE 304 (538)
T ss_pred hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecC----ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc
Confidence 35678899999999999999876 45899999999999985 57899999999999999999999999988765432
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. ..++++|.+++||+++++.+++.+.+.+ +++++|.||+||++.+++...... ......++|+|++++.
T Consensus 305 ~~--~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~-------~~~~~~~~G~~~~g~~ 374 (538)
T TIGR03208 305 SG--APVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEPDDA-------LEKASTTDGRPLPGVE 374 (538)
T ss_pred cC--CCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCcccc-------hhhccCcccccCCCCE
Confidence 21 3468999999999999999999998888 789999999999987655322110 0112457899999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++++++ +.++.|||+++|++++.||+++|+.+.. ..++||+|||+|+++++|.++++|
T Consensus 375 v~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~-----------------~~~~~~~TGD~~~~~~~g~l~~~g 437 (538)
T TIGR03208 375 VKVIDANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNST-----------------DAEGWFDTGDLAFQDAEGYIRING 437 (538)
T ss_pred EEEECCCCCCCcCCCCcEEEEecCcccccccCCcccccc-----------------cCCCceeccceEEECCCCcEEEEe
Confidence 99998765 3456799999999999999999886542 136899999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHh-hCCCCccC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSS-KLPLAMIP 317 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~P 317 (900)
|.||+||++|++|+|.+||++|.+||.|.+++|++.++...++.+++++++....... .+++++++++ +++.+++|
T Consensus 438 R~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P 514 (538)
T TIGR03208 438 RSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTLD---FAAMVAFLKAQKVALQYIP 514 (538)
T ss_pred ccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhcchhhccCC
Confidence 9999999999999999999999999999999999988777677889999886543322 3578888885 79999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~ 340 (900)
..+++++++|+|++||++|++|+
T Consensus 515 ~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 515 ERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred cEEEEeccCCCCCccccchHhhc
Confidence 99999999999999999999986
No 53
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.7e-39 Score=376.88 Aligned_cols=314 Identities=19% Similarity=0.273 Sum_probs=265.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|+++..+|++|..++. .++.++..|+++++... ..++..+++.++++++|++.++|+++..++.....
T Consensus 233 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~ 309 (559)
T PRK08315 233 EAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE---GFDPLATLAAVEEERCTALYGVPTMFIAELDHPDF 309 (559)
T ss_pred HhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC---CCCHHHHHHHHHHcCCeEEecchHHHHHHHhCccc
Confidence 457889999999999999998874 48999999999996532 56899999999999999999999999888764332
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
. ...+++||.+++|||++++.+++.+.+.++..++++.||+||++.+++...... .......++|+|++++.
T Consensus 310 ~--~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~------~~~~~~~~vG~p~~~~~ 381 (559)
T PRK08315 310 A--RFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDD------PLEKRVTTVGRALPHLE 381 (559)
T ss_pred C--CCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCccc------chhhccCCCCccCCCcE
Confidence 2 234689999999999999999999999887777999999999987655432111 01124568999999999
Q ss_pred EEEecCC-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVESD-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++++|++ + +.++.|||+|+|+.++.||+++|+.+...|. .++||+|||++++++||.++|+
T Consensus 382 v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~---------------~~~~~~TGD~~~~~~dg~~~~~ 446 (559)
T PRK08315 382 VKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAID---------------ADGWMHTGDLAVMDEEGYVNIV 446 (559)
T ss_pred EEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCC---------------CCCCEEccceEEEcCCceEEEE
Confidence 9999876 4 3567799999999999999999988776552 2579999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||.||+||++|++|+|.|||++|.++|+|.+++|++..+...+..++++|++...... ...+++++++++||.|++|
T Consensus 447 GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~P 523 (559)
T PRK08315 447 GRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATL---TEEDVRDFCRGKIAHYKIP 523 (559)
T ss_pred eeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCC---CHHHHHHHHHhhcccccCC
Confidence 9999999999999999999999999999999999998877666778888887654322 2358999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
..++++++||+|++||++|.+|++++..
T Consensus 524 ~~i~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 524 RYIRFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred cEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 9999999999999999999999876543
No 54
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-39 Score=372.09 Aligned_cols=309 Identities=20% Similarity=0.285 Sum_probs=263.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++.++|+++..+|++|.+++.. ++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.+......
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~ 275 (513)
T PRK07656 200 EYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLP----VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR 275 (513)
T ss_pred HhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecC----cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc
Confidence 4578899999999999999999865 889999999999875 56899999999999999999999999999876543
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. ..+++||.+++||+++++.+++.+.+.++...++|.||+||++++++....... ......++|+|++++.
T Consensus 276 ~~--~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~vG~~~~~~~ 347 (513)
T PRK07656 276 SA--EDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDD------RKTVAGTIGTAIAGVE 347 (513)
T ss_pred CC--CCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCcccc------ccccCCCccccCCCcE
Confidence 32 246899999999999999999999998843389999999999877665432111 0112567999999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++|+++ +.+..|||+++|+.++.||++++..+...|. .++||+|||+|+++++|.++++|
T Consensus 348 ~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---------------~~~~~~tGDl~~~~~~g~~~~~G 412 (513)
T PRK07656 348 NKIVNELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAID---------------ADGWLHTGDLGRLDEEGYLYIVD 412 (513)
T ss_pred EEEECCCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhc---------------cCCceeccceEEEcCCeeEEEEe
Confidence 99998765 3456799999999999999999887776552 26799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.||+||++|.+|+|.+||++|.++++|.+++|++..+...+..++++++.+...... .+++++++++.||.+++|.
T Consensus 413 R~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~ 489 (513)
T PRK07656 413 RKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELT---EEELIAYCREHLAKYKVPR 489 (513)
T ss_pred cccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCC
Confidence 9999999999999999999999999999999999988776677888899876533222 3578999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhcc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSA 341 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~ 341 (900)
.++++++||+|++||++|++|++
T Consensus 490 ~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 490 SIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEecCCCCCCccceeHHHHhc
Confidence 99999999999999999999875
No 55
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-39 Score=375.30 Aligned_cols=301 Identities=20% Similarity=0.267 Sum_probs=255.5
Q ss_pred CcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCCC
Q 002615 10 EELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHVP 88 (900)
Q Consensus 10 ~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~ 88 (900)
.++++..+|++|..++. .++.++..|++.++.+. ..++..+++.++++++|++.++|+++..++...... ...+
T Consensus 251 ~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~~~~ 325 (562)
T PRK05677 251 CEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISN---PRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFR--KLDF 325 (562)
T ss_pred ccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecC---cccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccc--cCCh
Confidence 46889999999999874 47778888988776642 457889999999999999999999999887643211 1235
Q ss_pred CCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCC
Q 002615 89 SSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESD 168 (900)
Q Consensus 89 ~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 168 (900)
++||.+++||+++++.+.+.|.+.+ ++++++.||+||++.+++..... .....++|+|++++.++++|++
T Consensus 326 ~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~vG~~~~~~~v~i~d~~ 395 (562)
T PRK05677 326 SALKLTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPSQ---------AIQVGTIGIPVPSTLCKVIDDD 395 (562)
T ss_pred hhceEEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCcc---------CCCCCccCccCCCCEEEEECCC
Confidence 7899999999999999999999877 78999999999998765532211 1234579999999999999876
Q ss_pred C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEE
Q 002615 169 T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIK 245 (900)
Q Consensus 169 ~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik 245 (900)
+ +.++.|||+++|+.+++||+++|+.+.+.|. .++||+|||+|+++++|.++|.||+||+||
T Consensus 396 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~---------------~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~ 460 (562)
T PRK05677 396 GNELPLGEVGELCVKGPQVMKGYWQRPEATDEILD---------------SDGWLKTGDIALIQEDGYMRIVDRKKDMIL 460 (562)
T ss_pred CCCCCCCCCeEEEEecCccchhhcCCchhhhhccC---------------CCCcccccceEEECCCCcEEEEecCcCeEE
Confidence 5 3466799999999999999999999888773 257999999999999999999999999999
Q ss_pred ECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCC
Q 002615 246 INGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDS 325 (900)
Q Consensus 246 ~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~ 325 (900)
++|++|+|.|||+.|.+||.|.+++|++.++...+..+++++++++.... ..++++++++++|+.|++|..|+++++
T Consensus 461 ~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~P~~i~~v~~ 537 (562)
T PRK05677 461 VSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETL---TKEQVMEHMRANLTGYKVPKAVEFRDE 537 (562)
T ss_pred eCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCC---CHHHHHHHHHHhhhhccCCcEEEEecc
Confidence 99999999999999999999999999998887777778888887654322 236899999999999999999999999
Q ss_pred cCCCCCCCcchhhhcccc
Q 002615 326 LPMTSSGKVDYASLSAST 343 (900)
Q Consensus 326 lP~t~~GKidr~~L~~~~ 343 (900)
||+|++||++|++|++..
T Consensus 538 iP~t~sGKi~r~~L~~~~ 555 (562)
T PRK05677 538 LPTTNVGKILRRELRDEE 555 (562)
T ss_pred CCCCCcccccHHHHHHHH
Confidence 999999999999997644
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-40 Score=385.70 Aligned_cols=339 Identities=16% Similarity=0.139 Sum_probs=259.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCe---eEEEecHHHHHHHHHHH
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSI---SRLTTVPSLMRVVLPAL 79 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~v---t~~~~~Ps~l~~l~~~~ 79 (900)
+.++++++|+++.++|++|+.++..++.+++.|++++++++.....+|..+++.++++++ +++.++|+++..+....
T Consensus 214 ~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~ 293 (631)
T PRK07769 214 DALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAAR 293 (631)
T ss_pred HHcCCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhh
Confidence 356788999999999999999998888889999999988654344589999999999886 78999999887665431
Q ss_pred --hh-ccCCCCCCCcCEEEEeccCCChhhHHHHHhhC-----CCceEEeecCccccccccceecccCCccc---------
Q 002615 80 --QS-QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLF-----PNISILNLYGSTEVSGDCTYFDCKRLPSI--------- 142 (900)
Q Consensus 80 --~~-~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~~--------- 142 (900)
.. .....++++||.+++||+++++++.+.|.+.| |...++|.||+||++..++.......+..
T Consensus 294 ~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (631)
T PRK07769 294 GLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELN 373 (631)
T ss_pred ccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHh
Confidence 11 11123578999999999999999999999886 23569999999999865554321110000
Q ss_pred -------c--ccCCCCcceeeeccCCcEEEEecCC-C---CCCCccEEEEccccccccccCCCCCCccchhccCCccccc
Q 002615 143 -------L--EMSTLKSVPIGLPISNCDIVLVESD-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICN 209 (900)
Q Consensus 143 -------~--~~~~~~~~~~G~p~~~~~~~i~d~~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~ 209 (900)
. ........++|+|+++..++|+|++ + +.++.|||+|+|++++.||+++++.|++.|..........
T Consensus 374 ~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~ 453 (631)
T PRK07769 374 AGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSE 453 (631)
T ss_pred CCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhccccccc
Confidence 0 0000123578999999999999853 2 3467899999999999999999999999986422110000
Q ss_pred C--cCCCCCcceEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhC-CCCeeE--EEEEEeec--------
Q 002615 210 C--SVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRG-HPDVVD--TAVVSHKH-------- 276 (900)
Q Consensus 210 ~--~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~-~~~v~~--~~v~~~~~-------- 276 (900)
. ......++||+|||+|+++ ||+|+|+||+||+||++|+||+|.|||++|.+ ||.|.+ ++|++.++
T Consensus 454 ~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~ 532 (631)
T PRK07769 454 SHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVF 532 (631)
T ss_pred ccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccc
Confidence 0 0001235899999999984 99999999999999999999999999999996 899997 88888776
Q ss_pred -----------CCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCC-Cc-cCCEEEEcC--CcCCCCCCCcchhhhcc
Q 002615 277 -----------QGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPL-AM-IPNRFVFMD--SLPMTSSGKVDYASLSA 341 (900)
Q Consensus 277 -----------~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~-~~-~P~~~~~v~--~lP~t~~GKidr~~L~~ 341 (900)
+..++.+++++++.++... ...++|+++++++|+. ++ .|+.+++++ +||+|++|||+|++|++
T Consensus 533 ~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~--~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~ 610 (631)
T PRK07769 533 DDSHAGLKFDPEDTSEQLVIVAERAPGAHK--LDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRA 610 (631)
T ss_pred cccccccccccCCCCccEEEEEEecCcccc--ccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHH
Confidence 4456778899988764211 2246788999999885 56 588888886 69999999999999987
Q ss_pred ccc
Q 002615 342 STS 344 (900)
Q Consensus 342 ~~~ 344 (900)
.+.
T Consensus 611 ~~~ 613 (631)
T PRK07769 611 AYL 613 (631)
T ss_pred HHH
Confidence 654
No 57
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-39 Score=375.36 Aligned_cols=332 Identities=19% Similarity=0.219 Sum_probs=268.4
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++.++|++++.+|++|++++..++.++..|++++++++ ..++..+++.|+++++|++.++|+++..++.......
T Consensus 218 ~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 294 (576)
T PRK05620 218 SLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP---DLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP 294 (576)
T ss_pred hcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC---CCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC
Confidence 5788999999999999999999888999999999998753 4588999999999999999999999998876543221
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....+||.+++||+++++.+.+.|.+.+ ++++++.||+||++..++......... .........++|++.++++++
T Consensus 295 --~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~ 370 (576)
T PRK05620 295 --PERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVS-GEARWAYRVSQGRFPASLEYR 370 (576)
T ss_pred --cccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCccc-cccccccccccCCcCCceeEE
Confidence 1235899999999999999999998887 789999999999987665433211000 000001234689999999999
Q ss_pred EecCCCC----CCCccEEEEccccccccccCCCCCC----ccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEE
Q 002615 164 LVESDTV----KPDEGEIYAGGLCLSNGYFSESTFM----PSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLV 235 (900)
Q Consensus 164 i~d~~~~----~~~~GEl~v~g~~~~~gY~~~~~~~----~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~ 235 (900)
++++... .+..|||+++|+.++.||+++++.+ ...|...+... .......++||+|||++++++||.++
T Consensus 371 i~~~g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~---~~~~~~~~g~~~TGD~~~~~~dg~l~ 447 (576)
T PRK05620 371 IVNDGQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVED---ANDRFTADGWLRTGDVGSVTRDGFLT 447 (576)
T ss_pred EecCCccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchh---hhcccccCCcEecCceEEEcCCceEE
Confidence 9986221 2357999999999999999999887 55554322110 00001235799999999999999999
Q ss_pred EEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCc
Q 002615 236 FLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAM 315 (900)
Q Consensus 236 ~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 315 (900)
|+||.||+||++|++|+|.+||++|.+||.|.+++|++.++...++.++++++..++....+...++|+++++++||.|+
T Consensus 448 ~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 527 (576)
T PRK05620 448 IHDRARDVIRSGGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWM 527 (576)
T ss_pred EEechhhhhhcCCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCcccc
Confidence 99999999999999999999999999999999999999888776677888888776544333345789999999999999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+|..|+++++||+|++||++|++|+++++.
T Consensus 528 ~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~ 557 (576)
T PRK05620 528 LPEYWTFVDEIDKTSVGKFDKKDLRQHLAD 557 (576)
T ss_pred CCeEEEEeccCCCCCcccCcHHHHHHHHhc
Confidence 999999999999999999999999887664
No 58
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-39 Score=372.65 Aligned_cols=313 Identities=19% Similarity=0.309 Sum_probs=265.9
Q ss_pred CCC-CCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPL-HGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~-~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
+++ ..+|+++..+|++|.+++..++.++..|+++++.+.. ..+|..+++.++++++|++.++|+++..++.......
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~ 287 (542)
T PRK07786 210 NGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLG--AFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP 287 (542)
T ss_pred cCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCC--CcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc
Confidence 455 5789999999999999998899999999999997422 3589999999999999999999999999987543222
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
. ..+||.+++||+++++++++.+.+.+++.++++.||+||++.+++...... ......++|+|++++.++
T Consensus 288 --~-~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~-------~~~~~~~~G~~~~~~~~~ 357 (542)
T PRK07786 288 --R-DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGED-------AIRKLGSVGKVIPTVAAR 357 (542)
T ss_pred --c-CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCccc-------ccccCCCccccCCCceEE
Confidence 1 237999999999999999999999999999999999999987655322111 111345789999999999
Q ss_pred EecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 164 LVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 164 i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
|+|+++ +.++.|||+++|+.+++||+++++.+...| .++||+|||+++++++|.++++||.
T Consensus 358 i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f----------------~~~~~~TGDl~~~~~~g~~~i~GR~ 421 (542)
T PRK07786 358 VVDENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF----------------AGGWFHSGDLVRQDEEGYVWVVDRK 421 (542)
T ss_pred EECCCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh----------------hCCcccccceEEEcCCceEEEEecc
Confidence 998765 345679999999999999999999888776 2479999999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
||+||++|++|+|.|||++|.+||.|.+++|++......++.+++++++...... ...++++++++++++.|++|..+
T Consensus 422 ~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i 499 (542)
T PRK07786 422 KDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAA--LTLEDLAEFLTDRLARYKHPKAL 499 (542)
T ss_pred cceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCC--CCHHHHHHHHHhhccCCCCCCEE
Confidence 9999999999999999999999999999999988776556677888887654321 23468999999999999999999
Q ss_pred EEcCCcCCCCCCCcchhhhcccccccc
Q 002615 321 VFMDSLPMTSSGKVDYASLSASTSFTI 347 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~~~~~~~~ 347 (900)
+++++||+|++||++|++|++.+....
T Consensus 500 ~~v~~iP~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 500 EIVDALPRNPAGKVLKTELRERYGACV 526 (542)
T ss_pred EEeccCCCCCcccccHHHHHHHHHhhh
Confidence 999999999999999999998877553
No 59
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7e-39 Score=368.62 Aligned_cols=313 Identities=17% Similarity=0.202 Sum_probs=265.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..+++.++++++..+|++|..++...+.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.......
T Consensus 193 ~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 268 (511)
T PRK13391 193 RLWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVME----HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEV 268 (511)
T ss_pred HhcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECC----CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhh
Confidence 3567788999999999999999988888999999999986 568999999999999999999999999887643322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
....+++++|.+++||+++++++.+.+.+.+ +..+++.||+||++.++.... .. ....+.++|+|+++ .+
T Consensus 269 ~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~-~~-------~~~~~~~vG~~~~g-~~ 338 (511)
T PRK13391 269 RDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTACDS-EE-------WLAHPGTVGRAMFG-DL 338 (511)
T ss_pred cccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEecC-cc-------ccccCCCcCCcccc-eE
Confidence 2223468999999999999999999999887 678999999999987554321 11 01134578999999 68
Q ss_pred EEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++|+++. .+..|||+++|+ ++.||+++++.+.+.|.. .++||+|||+++++++|.++++||
T Consensus 339 ~i~d~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~--------------~~~w~~TGD~g~~~~~g~l~~~gR 403 (511)
T PRK13391 339 HILDDDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHP--------------DGTWSTVGDIGYVDEDGYLYLTDR 403 (511)
T ss_pred EEECCCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhcc--------------CCCEEecCCEEEECCCccEEEecc
Confidence 88887663 456799999999 889999999988876632 248999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
.||++|++|++|+|.+||++|.+||.|.+++|++.++...++.+++++++.+.....+...++|+++++++||.|++|..
T Consensus 404 ~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~ 483 (511)
T PRK13391 404 AAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRS 483 (511)
T ss_pred CCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcE
Confidence 99999999999999999999999999999999998887777788888887665444444567899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+++++++|+|++||++|+.|++.+.
T Consensus 484 i~~~~~~P~t~~gKv~r~~l~~~~~ 508 (511)
T PRK13391 484 IDFEDELPRLPTGKLYKRLLRDRYW 508 (511)
T ss_pred EEEeecCCCCCccceeHHHHHHHhh
Confidence 9999999999999999999987654
No 60
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-39 Score=375.39 Aligned_cols=313 Identities=19% Similarity=0.261 Sum_probs=265.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++.++|+++..+|++|..+... ++.++..|++++++.. ..++..+++.++++++|++.++|+++..++.....
T Consensus 235 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~---~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~ 311 (558)
T PRK12583 235 ESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNE---AFDPLATLQAVEEERCTALYGVPTMFIAELDHPQR 311 (558)
T ss_pred HHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecC---CCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccc
Confidence 3468889999999999999988744 7888999999987642 46889999999999999999999999887754332
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
. ...+++||.+++|||++++.+.+.+.+.++...+++.||+||++.+++...... .......++|+|++++.
T Consensus 312 ~--~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~------~~~~~~~~vG~p~~~~~ 383 (558)
T PRK12583 312 G--NFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAAD------DLERRVETVGRTQPHLE 383 (558)
T ss_pred c--CCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCccc------ccccccCCCCccCCCCe
Confidence 2 234689999999999999999999999987778999999999997665432111 01124568999999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++|+++ +.++.|||+++|+.++.||+++++.+...|. .++||+|||++++++||++++.|
T Consensus 384 ~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~---------------~~~~~~TGDl~~~~~dg~l~i~G 448 (558)
T PRK12583 384 VKVVDPDGATVPRGEIGELCTRGYSVMKGYWNNPEATAESID---------------EDGWMHTGDLATMDEQGYVRIVG 448 (558)
T ss_pred EEEECCCCCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcC---------------CCCCeeccceEEECCCccEEEEe
Confidence 99998765 3456799999999999999999988776652 25799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|+||+||++|.+|+|.+||++|.++|.|.+++|++.++...+..++++++..+.... ...+|+++++++||.+++|.
T Consensus 449 R~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~i~~~~~~~L~~~~~P~ 525 (558)
T PRK12583 449 RSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAA---SEEELREFCKARIAHFKVPR 525 (558)
T ss_pred cccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCC---CHHHHHHHHHhhcccCcCCc
Confidence 999999999999999999999999999999999998887666788899887654332 23689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
.++++++||+|++||++|++|++++.
T Consensus 526 ~i~~v~~lP~t~sGK~~r~~L~~~~~ 551 (558)
T PRK12583 526 YFRFVDEFPMTVTGKVQKFRMREISI 551 (558)
T ss_pred EEEEeccCCCCCCCCccHHHHHHHHH
Confidence 99999999999999999999987654
No 61
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.1e-38 Score=368.30 Aligned_cols=317 Identities=21% Similarity=0.283 Sum_probs=265.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|++++.+|++|+.++..++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+.....
T Consensus 195 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 270 (515)
T TIGR03098 195 TYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD----YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE 270 (515)
T ss_pred HHhCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC----CCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC
Confidence 3467889999999999999999999999999999999986 568999999999999999999999999887642211
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..++++|.+++||+++++.+++.+.+.++++.+++.||+||++..+.. ... .......++|+|++++.+
T Consensus 271 ---~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~-~~~-------~~~~~~~~vG~~~~~~~~ 339 (515)
T TIGR03098 271 ---SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYL-PPE-------EVDRRPDSIGKAIPNAEV 339 (515)
T ss_pred ---CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEec-ccc-------cccCCCCCcceecCCCEE
Confidence 236799999999999999999999999988999999999998754322 110 012245689999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++++++ +.++.|||+++|+.++.||+++++.+.+.|...+.. ......+.+||+|||+|+++++|++++.||
T Consensus 340 ~i~~~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR 415 (515)
T TIGR03098 340 LVLREDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPR----PGELHLPELAVWSGDTVRRDEEGFLYFVGR 415 (515)
T ss_pred EEECCCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCc----cccccccccceeccceEEEcCCceEEEEec
Confidence 9998665 345679999999999999999999888877543210 000111346899999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
.||+||++|++|+|.+||++|.+||.|.+++|++.+++..++.++++++....... ..++++++++++|+.+++|..
T Consensus 416 ~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~ 492 (515)
T TIGR03098 416 RDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEEL---DRAALLAECRARLPNYMVPAL 492 (515)
T ss_pred cccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCCC---CHHHHHHHHHhhCccccCCCE
Confidence 99999999999999999999999999999999998887777788888876543322 236799999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhcc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSA 341 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~ 341 (900)
++++++||+|++||++|++|++
T Consensus 493 i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 493 IHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred EEEeccCCCCCCCCCcHHHhcc
Confidence 9999999999999999999964
No 62
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-39 Score=371.10 Aligned_cols=311 Identities=21% Similarity=0.299 Sum_probs=267.7
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.+++.++|+++..+|++|..++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.......
T Consensus 206 ~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 281 (523)
T PRK08316 206 AGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD----APDPELILRTIEAERITSFFAPPTVWISLLRHPDFD 281 (523)
T ss_pred HhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec----CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccc
Confidence 467889999999999999998865 556788999999986 468999999999999999999999999888654322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++||++++.++.+.+.+.++++.+++.||+||++.+++...... ......++|+|++++++
T Consensus 282 --~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------~~~~~~~~G~~~~~~~~ 352 (523)
T PRK08316 282 --TRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEE-------HLRRPGSAGRPVLNVET 352 (523)
T ss_pred --cCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccc-------cccccCCcccCCCCcEE
Confidence 234689999999999999999999999998999999999999987766432111 11234678999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++ +.+..|||+++|+.++.||+++++.+.+.| .++||+|||+|++++||.++++||
T Consensus 353 ~i~~~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~----------------~~~~~~TGDl~~~~~~g~l~i~gR 416 (523)
T PRK08316 353 RVVDDDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF----------------RGGWFHSGDLGVMDEEGYITVVDR 416 (523)
T ss_pred EEEcCCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh----------------hCCCeeccceEEEcCCceEEEecc
Confidence 9998665 345679999999999999999998888776 257999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
+||+||++|++|+|.+||+.|.+++.|.+++|++.+++..++.+++++++++.... ..++++++++++|+.+++|..
T Consensus 417 ~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~p~~ 493 (523)
T PRK08316 417 KKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATV---TEDELIAHCRARLAGFKVPKR 493 (523)
T ss_pred cccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCC---CHHHHHHHHHHhcccCCCCcE
Confidence 99999999999999999999999999999999998887777788888888755322 236788999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
+++++++|+|++||++|++|++.++..
T Consensus 494 i~~v~~~p~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 494 VIFVDELPRNPSGKILKRELRERYAGA 520 (523)
T ss_pred EEEecCCCCCCccceeHHHHHHHHHhh
Confidence 999999999999999999999887643
No 63
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=6e-39 Score=371.85 Aligned_cols=311 Identities=21% Similarity=0.265 Sum_probs=258.3
Q ss_pred CCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCC
Q 002615 9 GEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHV 87 (900)
Q Consensus 9 ~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~ 87 (900)
..++++.++|++|..++.. ++.+|..|+++++.+ ..++..+++.++++++|++.++|+++..++...........
T Consensus 226 ~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 301 (546)
T PLN02330 226 GQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMS----RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLS 301 (546)
T ss_pred CceEEEEecChHHHHHHHHHHHHHhhcCCEEEEec----ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccc
Confidence 3468899999999988764 788899999999986 67889999999999999999999999998864322111111
Q ss_pred CCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC
Q 002615 88 PSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES 167 (900)
Q Consensus 88 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 167 (900)
..++|.+++|||++++.+++.+.+.|+++++++.||+||+++++........ ........++|+|+++++++++|+
T Consensus 302 ~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~----~~~~~~~~~vG~~~~~~~v~i~d~ 377 (546)
T PLN02330 302 KLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEK----GHGIAKKNSVGFILPNLEVKFIDP 377 (546)
T ss_pred hheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccc----cccccccCccccccCCcEEEEEeC
Confidence 1257999999999999999999999999999999999999865443211100 000113457899999999999974
Q ss_pred CC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCc
Q 002615 168 DT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRT 243 (900)
Q Consensus 168 ~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ 243 (900)
+. ++++.|||+|+|++++.||+++++.+.+.|. .++||+|||++++++||.++++||+||+
T Consensus 378 ~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~---------------~~g~~~TGD~~~~~~dG~l~~~GR~~d~ 442 (546)
T PLN02330 378 DTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTID---------------EDGWLHTGDIGYIDDDGDIFIVDRIKEL 442 (546)
T ss_pred CCCccCCCCCceEEEEecchhhhhhccCccchhhhcc---------------CCCceecccEEEEeCCCcEEEEechHHh
Confidence 33 3467899999999999999999988876652 3689999999999999999999999999
Q ss_pred EEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEc
Q 002615 244 IKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFM 323 (900)
Q Consensus 244 ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v 323 (900)
||++|++|+|.+||++|.++|.|.+++|++.++...+..+++++++.+..... .++|++++++.|+.|++|..++++
T Consensus 443 i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~~~~v 519 (546)
T PLN02330 443 IKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKES---EEDILNFVAANVAHYKKVRVVQFV 519 (546)
T ss_pred hhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCceEEEEe
Confidence 99999999999999999999999999999988777777888888876543222 367999999999999999999999
Q ss_pred CCcCCCCCCCcchhhhcccccc
Q 002615 324 DSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 324 ~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++||+|++||++|++|++++..
T Consensus 520 ~~iP~t~~GK~~r~~L~~~~~~ 541 (546)
T PLN02330 520 DSIPKSLSGKIMRRLLKEKMLS 541 (546)
T ss_pred ccCCCCCCcceeHHHHHHHHHh
Confidence 9999999999999999887643
No 64
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-39 Score=369.80 Aligned_cols=312 Identities=21% Similarity=0.296 Sum_probs=264.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++..+|++|..++. ++.+++.|+++++.+ ..+|..+++.++++++|++.++|+++..++......
T Consensus 202 ~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~ 276 (524)
T PRK06188 202 AEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLA----KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR 276 (524)
T ss_pred hhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcC----CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc
Confidence 457788999999999999988864 678899999999996 568999999999999999999999999988764322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
. ..++++|.+++|||++++...+.+.+.+ +..+++.||+||++..++........ ........++|+|++++.+
T Consensus 277 ~--~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~---~~~~~~~~~~G~p~~g~~v 350 (524)
T PRK06188 277 T--RDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHD---PDDPKRLTSCGRPTPGLRV 350 (524)
T ss_pred C--CCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhcc---ccccccCCccccccCCcEE
Confidence 2 3478999999999999999988888887 56799999999997665543221110 0112245678999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++|+++ +.++.|||+++|+.++.||+++++.+...| .++||+|||+++++++|.++++||
T Consensus 351 ~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~----------------~~g~~~TGDl~~~~~~g~~~~~GR 414 (524)
T PRK06188 351 ALLDEDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF----------------RDGWLHTGDVAREDEDGFYYIVDR 414 (524)
T ss_pred EEEcCCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh----------------cCCceeecceEEEcCCccEEEEec
Confidence 9998765 345679999999999999999998877665 257999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
.|++||++|++|+|.+||++|.++++|.+++|++.++...+..+++++++++..... .++|++++++.++.+++|..
T Consensus 415 ~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~ 491 (524)
T PRK06188 415 KKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVD---AAELQAHVKERKGSVHAPKQ 491 (524)
T ss_pred cccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcE
Confidence 999999999999999999999999999999999988776677888888887543322 36799999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++++++||+|++||++|++|++.+.
T Consensus 492 i~~v~~~P~t~~gKi~r~~L~~~~~ 516 (524)
T PRK06188 492 VDFVDSLPLTALGKPDKKALRARYW 516 (524)
T ss_pred EEEecCCCCCccccccHHHHHHHHH
Confidence 9999999999999999999987753
No 65
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.4e-38 Score=367.58 Aligned_cols=303 Identities=18% Similarity=0.292 Sum_probs=258.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++.+|++|..++..++.+++.|+++++.+ ..++..+++.|+++++|++.++|+++..+.......
T Consensus 214 ~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~ 289 (542)
T PRK06155 214 EDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP----RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARE 289 (542)
T ss_pred HhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC----CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc
Confidence 4578899999999999999999998999999999999986 568999999999999999999999999887654332
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
. ...+++|.++.|| +++.+.+.+.+.+ +++++|.||+||++..++... .......+|.|++++.+
T Consensus 290 ~--~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~----------~~~~~~~vG~~~~~~~~ 354 (542)
T PRK06155 290 S--DRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTH----------GSQRPGSMGRLAPGFEA 354 (542)
T ss_pred c--cccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCC----------CCCCCCCcCccCCCceE
Confidence 2 2356888877555 5788889998887 789999999999987654321 01245678999999999
Q ss_pred EEecCCCC---CCCccEEEEccc---cccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 163 VLVESDTV---KPDEGEIYAGGL---CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 163 ~i~d~~~~---~~~~GEl~v~g~---~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+|+|+++. .+..|||+++|+ +++.||+++++.+.+.| .++||+|||+|++++||+++|
T Consensus 355 ~i~d~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~----------------~~~~~~TGD~~~~~~dG~l~i 418 (542)
T PRK06155 355 RVVDEHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW----------------RNLWFHTGDRVVRDADGWFRF 418 (542)
T ss_pred EEECCCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh----------------cCCcEeccceEEEcCCceEEE
Confidence 99987653 456799999998 69999999998887766 258999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||+||+||++|++|+|.+||++|.+||+|.+++|++.++...+..+.++++++.+... ...+++++++++|+.+++
T Consensus 419 ~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~l~~~~~ 495 (542)
T PRK06155 419 VDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTAL---EPVALVRHCEPRLAYFAV 495 (542)
T ss_pred EecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCC---CHHHHHHHHHhhCcCccC
Confidence 99999999999999999999999999999999999998877666677888887654332 236899999999999999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhcccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
|..|++++++|+|++|||+|++|++..
T Consensus 496 P~~i~~~~~iP~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 496 PRYVEFVAALPKTENGKVQKFVLREQG 522 (542)
T ss_pred CcEEEEeccCCCCcccceeHHHHHhhc
Confidence 999999999999999999999998754
No 66
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1e-38 Score=371.00 Aligned_cols=320 Identities=18% Similarity=0.255 Sum_probs=249.2
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCch---hhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHH
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPII---ELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPAL 79 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~---~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~ 79 (900)
+.+++.++|+.+..+|++|..+ +..|+++++++.. ....++..+++.|+++++|+++++|++++.+.+..
T Consensus 208 ~~~~~~~~~~~~~~~pl~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 280 (552)
T PRK09274 208 EDYGIEPGEIDLPTFPLFALFG-------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYG 280 (552)
T ss_pred HHhCCCCCceeeeccCHHHhhh-------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHh
Confidence 3568899999999999876433 4568888886421 12468899999999999999999999999998765
Q ss_pred hhccCCCCCCCcCEEEEeccCCChhhHHHHHhhCC-CceEEeecCccccccccceecccCCccc-cccCCCCcceeeecc
Q 002615 80 QSQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFP-NISILNLYGSTEVSGDCTYFDCKRLPSI-LEMSTLKSVPIGLPI 157 (900)
Q Consensus 80 ~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~p~ 157 (900)
.... .++++||.+++|||++++++.+.+.+.++ ++++++.||+||++++++.......... .........++|+|+
T Consensus 281 ~~~~--~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 358 (552)
T PRK09274 281 EANG--IKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPV 358 (552)
T ss_pred hhcC--CCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccC
Confidence 4322 34789999999999999999999999986 4899999999999876543221100000 000111234789999
Q ss_pred CCcEEEEecCCC------------CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCce
Q 002615 158 SNCDIVLVESDT------------VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDF 225 (900)
Q Consensus 158 ~~~~~~i~d~~~------------~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl 225 (900)
++++++|+|+.+ +.++.|||+++|+.++.||+++|+.+...|.... .+..||+|||+
T Consensus 359 ~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~-----------~g~~w~~TGDl 427 (552)
T PRK09274 359 DGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDG-----------QGDVWHRMGDL 427 (552)
T ss_pred CCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccC-----------CCCcEEEcCCE
Confidence 999999997421 3456799999999999999999998887664311 12259999999
Q ss_pred EEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCch-HHHHHHHH
Q 002615 226 ARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSS-EIFLSSIK 304 (900)
Q Consensus 226 ~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~-~~~~~~l~ 304 (900)
|++++||+++|+||+||+||++|++|+|.|||++|.+||.|.+|+|++.++.. +..++++|++.++.... +.+.++++
T Consensus 428 g~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~ 506 (552)
T PRK09274 428 GYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVACSKSALYQELR 506 (552)
T ss_pred EEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccccchHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999987754 45678888877654322 22345555
Q ss_pred HHHHhhCCCCccCCEEEEcCCcCCC--CCCCcchhhhccccc
Q 002615 305 SWVSSKLPLAMIPNRFVFMDSLPMT--SSGKVDYASLSASTS 344 (900)
Q Consensus 305 ~~l~~~l~~~~~P~~~~~v~~lP~t--~~GKidr~~L~~~~~ 344 (900)
++++.. +.++.|..++++++||+| ++|||||++|+++..
T Consensus 507 ~~l~~~-~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~ 547 (552)
T PRK09274 507 ALAAAH-PHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAA 547 (552)
T ss_pred HHHHhc-CCCcceeEEeccCCCCccccccccccHHHHHHHHH
Confidence 555433 556788999999999999 799999999987644
No 67
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.8e-39 Score=378.05 Aligned_cols=314 Identities=18% Similarity=0.181 Sum_probs=247.8
Q ss_pred CCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC-
Q 002615 6 PLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN- 84 (900)
Q Consensus 6 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~- 84 (900)
+++++|++++.+|++|.++...++.+++.|+++++.+ .++..+++.|+++++|+++++|++++.+.........
T Consensus 265 ~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~ 339 (666)
T PLN02614 265 ALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSD 339 (666)
T ss_pred CCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhc
Confidence 6789999999999999998866667788999998874 4788999999999999999999999988753211000
Q ss_pred ----------------------------C--------------CCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeec
Q 002615 85 ----------------------------M--------------HVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLY 122 (900)
Q Consensus 85 ----------------------------~--------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~Y 122 (900)
. ...++||.+++||+++++.+ ..+.+.++++.+++.|
T Consensus 340 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~Y 418 (666)
T PLN02614 340 GGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGY 418 (666)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeC
Confidence 0 00168999999999999875 6677777678999999
Q ss_pred CccccccccceecccCCccccccCCCCcceeeeccCCcEEEEec-CC-----CCCCCccEEEEccccccccccCCCCCCc
Q 002615 123 GSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVE-SD-----TVKPDEGEIYAGGLCLSNGYFSESTFMP 196 (900)
Q Consensus 123 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~-----~~~~~~GEl~v~g~~~~~gY~~~~~~~~ 196 (900)
|+||+++.++..... ......++|+|+++++++|+| ++ .++++.|||+|+|++++.|||++|+.|+
T Consensus 419 G~TE~~~~~~~~~~~--------~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~ 490 (666)
T PLN02614 419 GLTESCAGTFVSLPD--------ELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTK 490 (666)
T ss_pred chHhhhhheeeeccc--------cCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhh
Confidence 999987644322110 011346799999999999987 22 1345679999999999999999999999
Q ss_pred cchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEee
Q 002615 197 SEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHK 275 (900)
Q Consensus 197 ~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~ 275 (900)
+.|. ++||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+++|++..
T Consensus 491 ~~f~----------------dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~ 554 (666)
T PLN02614 491 EVLI----------------DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNS 554 (666)
T ss_pred hhhc----------------cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecC
Confidence 8872 579999999999999999999999999997 79999999999999999999999999976
Q ss_pred cCCceEEEEEEEEecCCC-----------C------chHHHHHHHHHHH-----HhhCCCCccCCEEEEcCC-c-----C
Q 002615 276 HQGELVILVAFIVLKEKK-----------T------SSEIFLSSIKSWV-----SSKLPLAMIPNRFVFMDS-L-----P 327 (900)
Q Consensus 276 ~~~~~~~l~~~v~~~~~~-----------~------~~~~~~~~l~~~l-----~~~l~~~~~P~~~~~v~~-l-----P 327 (900)
... .++|+|++.... . ..+...+.|.+.+ ++.|+.|.+++.|.++++ | .
T Consensus 555 ~~~---~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~ 631 (666)
T PLN02614 555 FES---FLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDL 631 (666)
T ss_pred Ccc---eEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCc
Confidence 422 688888875321 0 0112223333333 356999999999998874 3 4
Q ss_pred CCCCCCcchhhhccccccccccccC
Q 002615 328 MTSSGKVDYASLSASTSFTISAQHD 352 (900)
Q Consensus 328 ~t~~GKidr~~L~~~~~~~~~~~~~ 352 (900)
+|+++|+.|..+.+.|+..++..|.
T Consensus 632 lTpt~K~kR~~i~~~y~~~i~~ly~ 656 (666)
T PLN02614 632 LTPTFKKKRPQLLKYYQSVIDEMYK 656 (666)
T ss_pred CCHhhhhhHHHHHHHHHHHHHHHHH
Confidence 8999999999999988877655543
No 68
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-38 Score=367.53 Aligned_cols=314 Identities=21% Similarity=0.255 Sum_probs=258.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..++++++|+++..+|++|..++..++.++..|++++++++ ..++..+++.++++++|++.++|+++..+++.....
T Consensus 212 ~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~ 288 (539)
T PRK07008 212 DAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGP---DLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA 288 (539)
T ss_pred cccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecC---CcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc
Confidence 36788899999999999998877667888999999999753 468899999999999999999999999988754432
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCc-ccccc-CCCCcceeeeccCCc
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLP-SILEM-STLKSVPIGLPISNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~-~~~~~-~~~~~~~~G~p~~~~ 160 (900)
...+++||.+++||+++++.+++.+.+.+ ++.+++.||+||++..++........ ..... ......++|+|++++
T Consensus 289 --~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~ 365 (539)
T PRK07008 289 --GLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV 365 (539)
T ss_pred --CCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCchhhhhhcccCCccccce
Confidence 23468999999999999999999998888 78999999999998755433211000 00000 001235789999999
Q ss_pred EEEEecCCCCC---C--CccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEE
Q 002615 161 DIVLVESDTVK---P--DEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLV 235 (900)
Q Consensus 161 ~~~i~d~~~~~---~--~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~ 235 (900)
.++|+|+++.+ + ..|||+++|+.++.||+++++ ..| .++||+|||++++++||.++
T Consensus 366 ~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~----------------~~g~~~TGD~~~~~~dg~l~ 426 (539)
T PRK07008 366 DMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPL----------------VDGWFPTGDVATIDADGFMQ 426 (539)
T ss_pred EEEEECCCCCccCCCCCcceEEEEeCCccchhhcCChh---hhh----------------cCCCcccCceEEEcCCCcEE
Confidence 99999876532 1 359999999999999999873 222 14799999999999999999
Q ss_pred EEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCc
Q 002615 236 FLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAM 315 (900)
Q Consensus 236 ~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 315 (900)
++||+||+||++|++|+|.|||+++..+|.|.++++++.++...++.++++++..+.... ..++++++++++|+.|+
T Consensus 427 ~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~ 503 (539)
T PRK07008 427 ITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAEV---TREELLAFYEGKVAKWW 503 (539)
T ss_pred EeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCcc---CHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999998877666677888876654322 23689999999999999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+|..|+++++||+|++||++|++|++...
T Consensus 504 ~P~~i~~v~~lP~t~sgKi~r~~l~~~~~ 532 (539)
T PRK07008 504 IPDDVVFVDAIPHTATGKLQKLKLREQFR 532 (539)
T ss_pred CCeEEEEecCCCCCCccceeHHHHHHHHH
Confidence 99999999999999999999999987544
No 69
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-38 Score=365.91 Aligned_cols=308 Identities=18% Similarity=0.223 Sum_probs=265.2
Q ss_pred CCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCC
Q 002615 8 HGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHV 87 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~ 87 (900)
..+++++..+|++|..++...+.++..|+++++.+ ..++..+++.++++++|++.++|+++..+++.........+
T Consensus 185 ~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 260 (502)
T PRK08276 185 GPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME----KFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYD 260 (502)
T ss_pred CCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC----CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCC
Confidence 46889999999999999888888999999999886 57899999999999999999999999999875433323345
Q ss_pred CCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC
Q 002615 88 PSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES 167 (900)
Q Consensus 88 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 167 (900)
++++|.+++|||+++.++++.+.+.+ +..+++.||+||++.+++... .. ......++|+|+ ++.++++|+
T Consensus 261 ~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~-~~-------~~~~~~~~G~~~-~~~~~i~d~ 330 (502)
T PRK08276 261 VSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS-ED-------WLAHPGSVGKAV-LGEVRILDE 330 (502)
T ss_pred cccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC-cc-------ccccCCCcceec-ccEEEEECC
Confidence 78999999999999999999999988 678999999999987554321 11 011345789999 889999986
Q ss_pred CCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcE
Q 002615 168 DTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTI 244 (900)
Q Consensus 168 ~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~i 244 (900)
++. .++.|||+++|+.++.||+++++.+.+.|.. ++||+|||+++++++|.+++.||+|++|
T Consensus 331 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---------------~~~~~TGD~~~~~~~g~~~~~GR~~~~i 395 (502)
T PRK08276 331 DGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNP---------------HGWVTVGDVGYLDEDGYLYLTDRKSDMI 395 (502)
T ss_pred CCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcC---------------CCceeecceEEEcCCcCEEEeccCcceE
Confidence 653 4567999999999999999999988877743 4899999999999999999999999999
Q ss_pred EECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcC
Q 002615 245 KINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMD 324 (900)
Q Consensus 245 k~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~ 324 (900)
|++|++|++.+||.+|+++|.|.+++|++..+...++.++++++++......+...++++++++++|+.+++|..+++++
T Consensus 396 ~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~ 475 (502)
T PRK08276 396 ISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFED 475 (502)
T ss_pred EeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEec
Confidence 99999999999999999999999999999888777778999999876554444556689999999999999999999999
Q ss_pred CcCCCCCCCcchhhhccccc
Q 002615 325 SLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 325 ~lP~t~~GKidr~~L~~~~~ 344 (900)
+||+|++||++|++|++.+.
T Consensus 476 ~lP~t~~GKi~r~~L~~~~~ 495 (502)
T PRK08276 476 ELPRTPTGKLYKRRLRDRYW 495 (502)
T ss_pred CCCCCcccchhHHHHHHHHH
Confidence 99999999999999987654
No 70
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-39 Score=369.27 Aligned_cols=313 Identities=19% Similarity=0.278 Sum_probs=258.8
Q ss_pred CCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCC
Q 002615 6 PLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNM 85 (900)
Q Consensus 6 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~ 85 (900)
+++++|+++..+|++|..++..++ .++.|++.++++.. ..++..+++.|+++++|++.++|++++.+....... .
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~ 276 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVLLPSE--RFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVD--R 276 (528)
T ss_pred CCCcccEEEEeccchhHHHHHHHH-HHhcCceEEEeccc--CcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcC--C
Confidence 567889999999999999987665 57788888776422 468899999999999999999999999987654322 2
Q ss_pred CCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEe
Q 002615 86 HVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLV 165 (900)
Q Consensus 86 ~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~ 165 (900)
.++++||.+++||+++++.+.+.+.+.+ +..+++.||+||+++.++..... .............++|+|++++.++++
T Consensus 277 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~g~~~~i~ 354 (528)
T PRK07470 277 YDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPA-LHDAEDGPDARIGTCGFERTGMEVQIQ 354 (528)
T ss_pred CCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchh-hccccccccceeeccCcccCCcEEEEE
Confidence 3468999999999999999999998887 57899999999998765533211 000000012234578999999999999
Q ss_pred cCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCC
Q 002615 166 ESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDR 242 (900)
Q Consensus 166 d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd 242 (900)
|+++ +.++.|||+++|+.++.||+++++.+...| .++||+|||+++++++|+++++||+||
T Consensus 355 d~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~----------------~~~~~~TGDl~~~~~~g~l~~~GR~dd 418 (528)
T PRK07470 355 DDEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF----------------RDGWFRTGDLGHLDARGFLYITGRASD 418 (528)
T ss_pred CCCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh----------------cCCcEecceeEEEccCCeEEEeCCccc
Confidence 8765 345679999999999999999998887766 257999999999999999999999999
Q ss_pred cEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEE
Q 002615 243 TIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVF 322 (900)
Q Consensus 243 ~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~ 322 (900)
+||++|+||+|.+||++|.+++.|.+++|++.++...+..++++++..+.... ..+++++++++.||.|++|..+++
T Consensus 419 ~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~P~~~~~ 495 (528)
T PRK07470 419 MYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPV---DEAELLAWLDGKVARYKLPKRFFF 495 (528)
T ss_pred eEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCC---CHHHHHHHHHHhhhcCCCCcEEEE
Confidence 99999999999999999999999999999998887666677888887654322 236899999999999999999999
Q ss_pred cCCcCCCCCCCcchhhhccccc
Q 002615 323 MDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 323 v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+++||+|++||++|+.|++.++
T Consensus 496 ~~~iP~t~~GKi~r~~l~~~~~ 517 (528)
T PRK07470 496 WDALPKSGYGKITKKMVREELE 517 (528)
T ss_pred eccCCCCCcccccHHHHHHHHH
Confidence 9999999999999999976544
No 71
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=4.8e-38 Score=362.08 Aligned_cols=321 Identities=26% Similarity=0.422 Sum_probs=269.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++...|++|+.++..++.+|..|+++++++ .....++..+++.++++++|++.++|++++.+.......
T Consensus 177 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~-~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~ 255 (503)
T PRK04813 177 EDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALP-KDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFN 255 (503)
T ss_pred HHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcC-hhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccC
Confidence 3467889999999999999999999999999999999985 444578999999999999999999999998876543221
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...++++|.++++|+++++.+.+.+.+.+++..+++.||+||++..++....... ........++|+|.+++++
T Consensus 256 --~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~ 329 (503)
T PRK04813 256 --EEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDE----MLDQYKRLPIGYAKPDSPL 329 (503)
T ss_pred --cccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEeccc----ccccCCCCcccccCCCCEE
Confidence 2346899999999999999999999999989999999999999765543221110 0112345679999999999
Q ss_pred EEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+|+++. .++.|||+++|+.++.||+++++.+.+.|... .+.+||+|||++++ ++|.+++.||
T Consensus 330 ~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------------~g~~~~~tGD~~~~-~~g~~~~~GR 396 (503)
T PRK04813 330 LIIDEEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTF------------DGQPAYHTGDAGYL-EDGLLFYQGR 396 (503)
T ss_pred EEECCCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccC------------CCceeEECCceEEe-eCCeEEEecc
Confidence 99987663 45679999999999999999999888777432 24579999999999 9999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCC-CchHHHHHHHHHHHHhhCCCCccCC
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKK-TSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~-~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
.||+||++|++|+|.+||+.+.++|.|.+++|++..+....+.+++++++.+.. .....+.++++++++++++.+++|.
T Consensus 397 ~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~ 476 (503)
T PRK04813 397 IDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPR 476 (503)
T ss_pred ccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCe
Confidence 999999999999999999999999999999999877666667788888876542 2222445679999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhcccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~ 343 (900)
.++++++||+|++||++|++|++.+
T Consensus 477 ~i~~~~~~P~t~~gKv~r~~l~~~~ 501 (503)
T PRK04813 477 KFIYRDSLPLTPNGKIDRKALIEEV 501 (503)
T ss_pred EEEEeccCCCCCCCCCcHHHHHHHh
Confidence 9999999999999999999998654
No 72
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-38 Score=370.21 Aligned_cols=302 Identities=23% Similarity=0.306 Sum_probs=259.9
Q ss_pred CCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCC
Q 002615 9 GEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHV 87 (900)
Q Consensus 9 ~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~ 87 (900)
.+|+++..+|++|..++.. ++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.+.+...... ..
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~--~~ 334 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLP----APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERG--VD 334 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeC----CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccC--CC
Confidence 4789999999999988744 778899999999986 5688999999999999999999999999987544322 33
Q ss_pred CCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC
Q 002615 88 PSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES 167 (900)
Q Consensus 88 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 167 (900)
+++||.+++||+++++++.+.+.+.+ +..+++.||+||++++++..... ......++|+|++++.++|+|+
T Consensus 335 ~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~i~d~ 405 (573)
T PRK05605 335 LSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMS--------DDRRPGYVGVPFPDTEVRIVDP 405 (573)
T ss_pred chhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcc--------cCCcCCccccCCCCCEEEEEcC
Confidence 68999999999999999999998876 78899999999998766543211 1123568999999999999986
Q ss_pred CC-----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCC
Q 002615 168 DT-----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDR 242 (900)
Q Consensus 168 ~~-----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd 242 (900)
++ +.+..|||+++|+.++.||+++++.+.+.|. .+||+|||+++++++|.++++||+||
T Consensus 406 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~----------------~g~~~TGD~~~~~~~g~l~i~gR~dd 469 (573)
T PRK05605 406 EDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFL----------------DGWFRTGDVVVMEEDGFIRIVDRIKE 469 (573)
T ss_pred CCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhccc----------------CCCcccCCEEEEcCCCcEEEEecccc
Confidence 54 3456799999999999999999988887662 35999999999999999999999999
Q ss_pred cEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEE
Q 002615 243 TIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVF 322 (900)
Q Consensus 243 ~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~ 322 (900)
+||++|++|+|.+||+++.+|+.|.+++|++.++...+..+++++++.++.... .++|+++++++|+.+++|..+++
T Consensus 470 ~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~ 546 (573)
T PRK05605 470 LIITGGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALD---PEGLRAYCREHLTRYKVPRRFYH 546 (573)
T ss_pred ceeeCCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCC---HHHHHHHHHHhCccccCCcEEEE
Confidence 999999999999999999999999999999988777777889999887653322 36899999999999999999999
Q ss_pred cCCcCCCCCCCcchhhhccccc
Q 002615 323 MDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 323 v~~lP~t~~GKidr~~L~~~~~ 344 (900)
+++||+|++||++|++|+++..
T Consensus 547 ~~~iP~t~~GKi~r~~L~~~~~ 568 (573)
T PRK05605 547 VDELPRDQLGKVRRREVREELL 568 (573)
T ss_pred eccCCCCCcccccHHHHHHHHH
Confidence 9999999999999999987653
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-38 Score=403.31 Aligned_cols=318 Identities=22% Similarity=0.302 Sum_probs=263.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|+++..+|++|..++.. ++.+++.|+++++.+. ..++..+++.++++++|++.++|++++.+.+....
T Consensus 816 ~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 892 (1146)
T PRK08633 816 DVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPD---PTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKL 892 (1146)
T ss_pred HhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCC---CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcccc
Confidence 4578899999999999999999866 8899999999998752 46889999999999999999999999988764322
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCcccc-ccCCCCcceeeeccCCc
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSIL-EMSTLKSVPIGLPISNC 160 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~p~~~~ 160 (900)
. ..+++++|.+++|||++++++.+.+++.+ ++++++.||+||++++++........... ........++|+|++++
T Consensus 893 ~--~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 969 (1146)
T PRK08633 893 H--PLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGV 969 (1146)
T ss_pred C--cccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCC
Confidence 2 23468999999999999999999999988 78999999999998766543211100000 11122456899999999
Q ss_pred EEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 161 DIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 161 ~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+++++|+++ ++++.|||+++|+.++.||+++|+.+.+.|... ++++||+|||++++++||++++
T Consensus 970 ~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~------------~~~~~~~TGD~~~~~~~g~l~~ 1037 (1146)
T PRK08633 970 AVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDI------------DGIGWYVTGDKGHLDEDGFLTI 1037 (1146)
T ss_pred EEEEEcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcC------------CCCCeEECCCEEEEcCCceEEE
Confidence 999998643 456789999999999999999999998877431 1468999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCC--CeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHh-hCCC
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHP--DVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSS-KLPL 313 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~--~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~-~l~~ 313 (900)
+||.||+||++|++|+|.|||++|.+|| .+.+++|++.+++..++.++++++... . ..+++++++++ .+|.
T Consensus 1038 ~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~--~----~~~~l~~~~~~~~l~~ 1111 (1146)
T PRK08633 1038 TDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGA--E----DVEELKRAIKESGLPN 1111 (1146)
T ss_pred EecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCc--c----CHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999 466789998888877788888887621 1 23567777764 6999
Q ss_pred CccCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 314 AMIPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 314 ~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
|++|..+++++++|+|++||+||++|++..+
T Consensus 1112 ~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1112 LWKPSRYFKVEALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred ccCCcEEEEecCcCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999987543
No 74
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-38 Score=361.93 Aligned_cols=310 Identities=19% Similarity=0.197 Sum_probs=261.9
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++..+|++|..+....+.++..|+++++.+ ..++..+++.++++++|++.++|++++.++......
T Consensus 189 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~ 264 (509)
T PRK12406 189 LIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP----RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEV 264 (509)
T ss_pred hhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc----CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhh
Confidence 4678899999999999999988777777889999999985 468899999999999999999999999988644332
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
....++++||.++.||+++++++++.+.+.+ ++.+++.||+||++.+++... .. ....+.++|+|++++.+
T Consensus 265 ~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~-------~~~~~~~~G~~~~~~~~ 335 (509)
T PRK12406 265 RAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFATS-ED-------ALSHPGTVGKAAPGAEL 335 (509)
T ss_pred cccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecCc-cc-------ccccCCCcCccCCCcEE
Confidence 2234468999999999999999999999887 688999999999987554221 10 11134578999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccc-cccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSN-GYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~-gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
+++|+++ +.+..|||+++|+.++. +|+++|+.+...+ .++||+|||+++++++|.++++|
T Consensus 336 ~i~d~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~----------------~~~~~~TGD~~~~~~~g~~~~~G 399 (509)
T PRK12406 336 RFVDEDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID----------------RGGFITSGDVGYLDADGYLFLCD 399 (509)
T ss_pred EEECCCCCCCCCCCceEEEEECCccccccccCCchhccccc----------------CCCCeEEccEEEEcCCceEEEee
Confidence 9998765 34567999999998765 8999888776543 36799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.||+||++|++|+|.+||+.|.++|.|.++++++.++...++.+++++++...... ..++|++.+++.|+.|++|.
T Consensus 400 R~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~P~ 476 (509)
T PRK12406 400 RKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATL---DEADIRAQLKARLAGYKVPK 476 (509)
T ss_pred cccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCC---CHHHHHHHHHHhcccCCCCc
Confidence 999999999999999999999999999999999998887666778888887654322 24689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
.+++++++|+|++||++|++|++.+.
T Consensus 477 ~i~~~~~iP~t~~GK~~r~~L~~~~~ 502 (509)
T PRK12406 477 HIEIMAELPREDSGKIFKRRLRDPYW 502 (509)
T ss_pred EEEEeccCCCCCccchhHHHHHHHHH
Confidence 99999999999999999999986543
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-38 Score=383.97 Aligned_cols=300 Identities=14% Similarity=0.221 Sum_probs=238.1
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCC-eEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTAC-TLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~-~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|++++.+|++|+.++...+.+++.|+ ++++.+ .+++..+++.|++++||+++++|++++.+++....
T Consensus 639 ~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~----~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~ 714 (994)
T PRK07868 639 SAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSR----GLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAF 714 (994)
T ss_pred hhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecC----CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCC
Confidence 4568899999999999999999988665555555 455553 46899999999999999999999999998865221
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCc-
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNC- 160 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~- 160 (900)
...++++||.++ |+.+++++++.+.+.++++.++|.||+||++..++. . + .....++|+|++++
T Consensus 715 --~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~--~---~------~~~~~svG~p~pg~~ 779 (994)
T PRK07868 715 --VLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN--V---S------GAKIGSKGRPLPGAG 779 (994)
T ss_pred --ccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccc--c---C------CCCCcccCCccCCCC
Confidence 123467899876 445999999999999987899999999998754321 1 0 12456899999997
Q ss_pred EEEEe-----------cCCC-----CCCCccEEEEccccccccccCCCCCCcc--chhccCCcccccCcCCCCCcceEec
Q 002615 161 DIVLV-----------ESDT-----VKPDEGEIYAGGLCLSNGYFSESTFMPS--EYVKLHNNSICNCSVSCGSQTYFRT 222 (900)
Q Consensus 161 ~~~i~-----------d~~~-----~~~~~GEl~v~g~~~~~gY~~~~~~~~~--~f~~~~~~~~~~~~~~~~~~~~~~T 222 (900)
+++|. ++++ +.++.|||+++|+. |+ +|+.+.. .|. .+++||+|
T Consensus 780 ~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~----~~-~p~~t~~~~~~~--------------~~dgw~~T 840 (994)
T PRK07868 780 RVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARG----PI-DPTASVKRGVFA--------------PADTWIST 840 (994)
T ss_pred ceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCC----CC-ChhhhhHhcccc--------------cCCEEEec
Confidence 56553 2332 34677999999875 33 3433221 121 14799999
Q ss_pred CceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHH
Q 002615 223 GDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSS 302 (900)
Q Consensus 223 GDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~ 302 (900)
||+|++|+||+|+|+||+||+||++|++|+|.|||++|.+||.|.+|+|++.+++. .+.++++|+++++.... .++
T Consensus 841 GDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~---~~~ 916 (994)
T PRK07868 841 EYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAIT---AAD 916 (994)
T ss_pred cceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCC---HHH
Confidence 99999999999999999999999999999999999999999999999999988765 46788999887654322 368
Q ss_pred HHHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 303 IKSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 303 l~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
|++++++ ||.||+|+.|+++++||+|++|||+|++|++...+
T Consensus 917 L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~lp 958 (994)
T PRK07868 917 LTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGIP 958 (994)
T ss_pred HHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCCC
Confidence 9999986 99999999999999999999999999999876543
No 76
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-38 Score=360.67 Aligned_cols=308 Identities=21% Similarity=0.248 Sum_probs=255.1
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHH--HcCeeEEEecHHHHHHHHHHHh
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQ--AYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~--~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.+.+.++|++++.+|++|..++.. ++.++..|+++++.+ ..++..++..+. ++++|++.++|++++.+.....
T Consensus 170 ~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~ 245 (488)
T PRK09088 170 LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN----GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG 245 (488)
T ss_pred hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC----CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC
Confidence 346788999999999999999866 677888999999875 457778888775 4899999999999998875432
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceec-ccCCccccccCCCCcceeeeccCC
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFD-CKRLPSILEMSTLKSVPIGLPISN 159 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~p~~~ 159 (900)
. ....+++||.+++||++++....+.+.+. ++.+++.||+||++....... +.. ......++|+|+++
T Consensus 246 ~--~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~vG~~~~~ 314 (488)
T PRK09088 246 F--DAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDV-------IRAKAGAAGIPTPT 314 (488)
T ss_pred c--CccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCccc-------ccccCCccccCCCC
Confidence 1 12336799999999999999888887764 788999999999986543211 110 01134679999999
Q ss_pred cEEEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 160 CDIVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 160 ~~~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
+.++++|+++ +.+..|||+|+|+.++.||+++++.+.+.|. .++||+|||+|+++++|.++|
T Consensus 315 ~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~---------------~~g~~~TGDl~~~~~~g~l~i 379 (488)
T PRK09088 315 VQTRVVDDQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFT---------------GDGWFRTGDIARRDADGFFWV 379 (488)
T ss_pred cEEEEECCCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhc---------------CCCCeeecceEEEcCCCcEEE
Confidence 9999998665 3456799999999999999999988876663 368999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
+||+||+||++|++|+|.+||++|.++|.|.+++|++.+++..++..++++++++.... ..++++++++++++.|++
T Consensus 380 ~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~ 456 (488)
T PRK09088 380 VDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPL---DLERIRSHLSTRLAKYKV 456 (488)
T ss_pred eccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCC---CHHHHHHHHHhhCcCCCC
Confidence 99999999999999999999999999999999999998876555667788887654321 246899999999999999
Q ss_pred CCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 317 PNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 317 P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
|..++++++||+|++||++|++|++++.
T Consensus 457 p~~i~~~~~iP~t~~gKi~r~~l~~~~~ 484 (488)
T PRK09088 457 PKHLRLVDALPRTASGKLQKARLRDALA 484 (488)
T ss_pred CCEEEEcccCCCCCCCceeHHHHHHHHH
Confidence 9999999999999999999999987654
No 77
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.5e-38 Score=363.03 Aligned_cols=306 Identities=19% Similarity=0.282 Sum_probs=259.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|++++.+|++|..++. .++.+++.|+++++.+ ..++..+++.+. ++|++.++|+++..++.....
T Consensus 190 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~ 263 (504)
T PRK07514 190 DYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLP----KFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRL 263 (504)
T ss_pred HHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECC----CCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCC
Confidence 356789999999999999998874 5889999999999986 567899999883 699999999999988765322
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
....++++|.+++||+++++++.+.|.+.+ +.++++.||+||++..++... .......++|.|++++.
T Consensus 264 --~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~---------~~~~~~~~~G~~~~~~~ 331 (504)
T PRK07514 264 --TREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSNPY---------DGERRAGTVGFPLPGVS 331 (504)
T ss_pred --CcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccCCc---------cccccCcccccCCCCcE
Confidence 123468999999999999999999999887 678999999999876543211 01123467999999999
Q ss_pred EEEec-CCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVE-SDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d-~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++++| +++ +.++.|||+|+|++++.||+++++.+.+.|.. ++||+|||+++++++|.++++
T Consensus 332 v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~---------------~~~~~TGDl~~~~~~g~~~~~ 396 (504)
T PRK07514 332 LRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRA---------------DGFFITGDLGKIDERGYVHIV 396 (504)
T ss_pred EEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhccc---------------CCCeeecceEEEcCCccEEEe
Confidence 99998 333 34567999999999999999999998887742 569999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||+||+||++|++|+|.+||+++.++++|.+++|++.++...+..++++++........ .++++++++++|+.+++|
T Consensus 397 GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~l~~~~~p 473 (504)
T PRK07514 397 GRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALD---EAAILAALKGRLARFKQP 473 (504)
T ss_pred ccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCC---HHHHHHHHHhhcccCCCC
Confidence 99999999999999999999999999999999999988776667788888876543322 367899999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
..+++++++|+|++||++|++|++.+.
T Consensus 474 ~~i~~v~~~p~t~~gK~~r~~l~~~~~ 500 (504)
T PRK07514 474 KRVFFVDELPRNTMGKVQKNLLREQYA 500 (504)
T ss_pred cEEEEeccCCCCCCcceeHHHHHHHHH
Confidence 999999999999999999999987654
No 78
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-38 Score=360.27 Aligned_cols=302 Identities=19% Similarity=0.241 Sum_probs=256.0
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++.++|+++..+|++|.+++..++.++..|+++++.+ ..++..+++.++++++|.+.++|+++..+........
T Consensus 211 ~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 286 (516)
T PRK13383 211 RTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR----HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR 286 (516)
T ss_pred hhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC----CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc
Confidence 456789999999999999999988899999999999875 5788999999999999999999999999876543221
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....++++|.+++||+++++++++.|.+.+ +..+++.||+||++..+.... .. ......++|+|++++.++
T Consensus 287 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~-~~-------~~~~~~~~G~~~~~~~~~ 357 (516)
T PRK13383 287 ARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATP-AD-------LRDAPETVGKPVAGCPVR 357 (516)
T ss_pred ccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceeccc-cc-------cccCCCcccCCCCCcEEE
Confidence 123467999999999999999999999988 678999999999986544221 10 011345789999999999
Q ss_pred EecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 164 LVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 164 i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
|+|+++. +++.|||+++|+.++.||++++.. .+ .++||+|||+++++++|+++++||+
T Consensus 358 i~d~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~----------------~~g~~~TGDl~~~d~~G~l~i~GR~ 418 (516)
T PRK13383 358 ILDRNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV----------------VDGMTSTGDMGYLDNAGRLFIVGRE 418 (516)
T ss_pred EECCCCCCCCCCCceEEEEecCcccccccCCchh---he----------------ecCceecceeEEEcCCccEEEeccc
Confidence 9987653 456799999999999999986531 11 2579999999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
||+||++|++|+|.+||+.|.+||.|.++++++.++...++.++++++++..... ..++++++++++++.+++|..+
T Consensus 419 ~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~p~~i 495 (516)
T PRK13383 419 DDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGV---DAAQLRDYLKDRVSRFEQPRDI 495 (516)
T ss_pred cceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCC---CHHHHHHHHHHhcccCCCCcEE
Confidence 9999999999999999999999999999999998877777788889987754332 2357999999999999999999
Q ss_pred EEcCCcCCCCCCCcchhhhc
Q 002615 321 VFMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~ 340 (900)
+++++||+|++||++|++|+
T Consensus 496 ~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 496 NIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EEeCCCCCCCCCcCcHHHhC
Confidence 99999999999999999984
No 79
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-38 Score=364.42 Aligned_cols=313 Identities=22% Similarity=0.322 Sum_probs=268.0
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++..+|++|..++...+.++..|+++++++. .++..+++.++++++|++.++|++++.+.......
T Consensus 201 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~ 276 (521)
T PRK06187 201 AWLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR----FDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY 276 (521)
T ss_pred HhhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC----CCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC
Confidence 35788999999999999999999887779999999999863 48999999999999999999999999998766542
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++|||++++.+++.+.+.+ ++++++.||+||++.+++........ ........++|+|++++.+
T Consensus 277 --~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~ 350 (521)
T PRK06187 277 --FVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQL---PGQWTKRRSAGRPLPGVEA 350 (521)
T ss_pred --ccCcchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCccccc---ccccccCCccccccCCeEE
Confidence 23478999999999999999999999988 89999999999998766543221110 0001145679999999999
Q ss_pred EEecCCCC---C--CCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 163 VLVESDTV---K--PDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 163 ~i~d~~~~---~--~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
+|+|+++. . +..|||+++|+.++.||+++++.+.+.|. ++||+|||+++++++|.++++
T Consensus 351 ~i~~~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~----------------~~~~~tGD~~~~~~~g~~~~~ 414 (521)
T PRK06187 351 RIVDDDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETID----------------GGWLHTGDVGYIDEDGYLYIT 414 (521)
T ss_pred EEECCCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhh----------------CCceeccceEEEcCCCCEEEe
Confidence 99987663 3 56799999999999999999888777662 359999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||.||+||++|.+|+|.+||+.|.++++|.+++|++.+++..++.++++++++...... ..++++++++.|+.+++|
T Consensus 415 GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p 491 (521)
T PRK06187 415 DRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLD---AKELRAFLRGRLAKFKLP 491 (521)
T ss_pred ecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999887776667888888876654322 367899999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
..++++++||+|++||++|++|++++.
T Consensus 492 ~~i~~v~~~P~t~~gK~~r~~l~~~~~ 518 (521)
T PRK06187 492 KRIAFVDELPRTSVGKILKRVLREQYA 518 (521)
T ss_pred eEEEEccCCCCCCCCCeeHHHHHHHHh
Confidence 999999999999999999999988765
No 80
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6e-38 Score=363.77 Aligned_cols=308 Identities=19% Similarity=0.260 Sum_probs=255.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|++++.+|++|.+++..++.++..|+++++.+ .+++..+++.|+++++|+++++|++++.+.+...
T Consensus 215 ~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~-- 288 (540)
T PRK06164 215 RAYGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP----VFDAARTARALRRHRVTHTFGNDEMLRRILDTAG-- 288 (540)
T ss_pred HhcCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC----CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc--
Confidence 4578899999999999999999999999999999999986 5788999999999999999999999999987622
Q ss_pred cCCCCCCCcCEEEEec-cCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeecc-CCc
Q 002615 83 HNMHVPSSLKLLVLSG-EVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPI-SNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gG-e~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~ 160 (900)
....++++|.+.++| .+.+..+.+.+.+. ++++++.||+||++..++...... .........|.|+ +++
T Consensus 289 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~ 359 (540)
T PRK06164 289 -ERADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATD------PVSVRIEGGGRPASPEA 359 (540)
T ss_pred -ccCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCC------CCcceeccCccccCCCe
Confidence 223478899887776 45556666665554 788999999999987655432211 1111234567775 789
Q ss_pred EEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEE
Q 002615 161 DIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVF 236 (900)
Q Consensus 161 ~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~ 236 (900)
.++++|+++ +.++.|||+|+|++++.||+++|+.+.+.|.. ++||+|||+|+++++|.+++
T Consensus 360 ~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~---------------~~~~~TGDl~~~~~~g~l~~ 424 (540)
T PRK06164 360 RVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARALTD---------------DGYFRTGDLGYTRGDGQFVY 424 (540)
T ss_pred EEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhcccC---------------CCceecCCeEEEcCCceEEE
Confidence 999998543 35667999999999999999999998887743 57999999999999999999
Q ss_pred EcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCcc
Q 002615 237 LGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMI 316 (900)
Q Consensus 237 ~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 316 (900)
.||.||+||++|++|+|.+||+.|.+||.|.+++|++.... ....+++++++++.... ..++++++++++||.+++
T Consensus 425 ~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~-~~~~~~~~vv~~~~~~~---~~~~l~~~~~~~l~~~~~ 500 (540)
T PRK06164 425 QTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATRD-GKTVPVAFVIPTDGASP---DEAGLMAACREALAGFKV 500 (540)
T ss_pred EeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCCC-CceeEEEEEEeCCCCCC---CHHHHHHHHHhhcccCcC
Confidence 99999999999999999999999999999999999987743 34578888887654322 246899999999999999
Q ss_pred CCEEEEcCCcCCCCCC---Ccchhhhccccc
Q 002615 317 PNRFVFMDSLPMTSSG---KVDYASLSASTS 344 (900)
Q Consensus 317 P~~~~~v~~lP~t~~G---Kidr~~L~~~~~ 344 (900)
|..|++++++|+|++| |++|++|++++.
T Consensus 501 P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~ 531 (540)
T PRK06164 501 PARVQVVEAFPVTESANGAKIQKHRLREMAQ 531 (540)
T ss_pred CcEEEEecCCCCCCCCccccccHHHHHHHHH
Confidence 9999999999999999 999999987654
No 81
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-37 Score=340.35 Aligned_cols=283 Identities=23% Similarity=0.329 Sum_probs=238.5
Q ss_pred CCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcC--eeEEEecHHHHHHHHHHHhhccCC
Q 002615 8 HGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYS--ISRLTTVPSLMRVVLPALQSQHNM 85 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~--vt~~~~~Ps~l~~l~~~~~~~~~~ 85 (900)
...++++..+|++|..++..++.+++.|++++++. ....+++..+++.+++++ +++..++|+.+..++..... .
T Consensus 72 ~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~---~ 147 (358)
T PRK07824 72 GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELD-VSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA---T 147 (358)
T ss_pred CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecC-cCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc---c
Confidence 34578899999999999988999999999998842 112468899999999998 56777889888766543221 2
Q ss_pred CCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEe
Q 002615 86 HVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLV 165 (900)
Q Consensus 86 ~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~ 165 (900)
..+++||.+++|||++++.+.+.+.+. ++++++.||+||++..+. ..|+|++++++++.
T Consensus 148 ~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~-------------------~~G~~~~g~~v~i~ 206 (358)
T PRK07824 148 AALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSETSGGCV-------------------YDGVPLDGVRVRVE 206 (358)
T ss_pred CCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCccCCCcC-------------------cCceeCCCCEEEec
Confidence 346899999999999999999988764 789999999999875332 24889999999985
Q ss_pred cCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEE
Q 002615 166 ESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIK 245 (900)
Q Consensus 166 d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik 245 (900)
+ |||+++|+.++.||+++++.+ .|. .++||+|||++++ ++|.++++||.||+||
T Consensus 207 ~--------Gei~v~g~~~~~gY~~~~~~~--~~~---------------~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~ 260 (358)
T PRK07824 207 D--------GRIALGGPTLAKGYRNPVDPD--PFA---------------EPGWFRTDDLGAL-DDGVLTVLGRADDAIS 260 (358)
T ss_pred C--------CEEEEecCccccccCCCcccc--ccc---------------CCCceecccEEEE-eCCEEEEEeccCCeEE
Confidence 3 999999999999999987643 221 2469999999999 8999999999999999
Q ss_pred ECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCC
Q 002615 246 INGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDS 325 (900)
Q Consensus 246 ~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~ 325 (900)
++|++|+|.+||++|.+||.|.+|+|++.+++..++.++++++.+.... ...++|++++++.|+.|++|..++++++
T Consensus 261 ~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~---~~~~~i~~~~~~~l~~~~~P~~i~~v~~ 337 (358)
T PRK07824 261 TGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA---PTLEALRAHVARTLDRTAAPRELHVVDE 337 (358)
T ss_pred ECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC---cCHHHHHHHHHhhCccccCCCEEEEecC
Confidence 9999999999999999999999999999888777788899887765432 2346899999999999999999999999
Q ss_pred cCCCCCCCcchhhhccccc
Q 002615 326 LPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 326 lP~t~~GKidr~~L~~~~~ 344 (900)
||+|++|||||++|++.+.
T Consensus 338 lP~t~~GKi~r~~L~~~~~ 356 (358)
T PRK07824 338 LPRRGIGKVDRRALVRRFA 356 (358)
T ss_pred CCCCCCccccHHHHHHHhh
Confidence 9999999999999987654
No 82
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.2e-38 Score=359.26 Aligned_cols=302 Identities=18% Similarity=0.219 Sum_probs=249.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.|+++++|+++..+|++|..++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|+.+..++.....
T Consensus 186 ~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~ 261 (529)
T PRK07867 186 QRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR----KFSASGFLPDVRRYGATYANYVGKPLSYVLATPER 261 (529)
T ss_pred HhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC----CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCc
Confidence 4678899999999999999999865 677899999999985 56899999999999999999999999988765332
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. ...+++| +++||+++++.+ ..+.+.+ ++++++.||+||++..++..+ .....++|.|+++
T Consensus 262 ~~--~~~~~lr-~~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~~-----------~~~~~~~g~~~~~-- 323 (529)
T PRK07867 262 PD--DADNPLR-IVYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRTP-----------DTPPGALGPLPPG-- 323 (529)
T ss_pred cc--ccccceE-EEecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccCC-----------CCCCCCcCCCCCC--
Confidence 21 1235788 456899888765 6677777 789999999999986544211 1123468999998
Q ss_pred EEEecCC-C---CCCC------------ccEEEE-ccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCc
Q 002615 162 IVLVESD-T---VKPD------------EGEIYA-GGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGD 224 (900)
Q Consensus 162 ~~i~d~~-~---~~~~------------~GEl~v-~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGD 224 (900)
+++++++ + +.++ .|||++ +|+.++.||+++|+.+.+.| .++||+|||
T Consensus 324 ~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~----------------~~g~~~TGD 387 (529)
T PRK07867 324 VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM----------------RGGVYWSGD 387 (529)
T ss_pred EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh----------------cCCeEeecc
Confidence 5666532 2 2334 799999 99999999999999887766 257999999
Q ss_pred eEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHH
Q 002615 225 FARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIK 304 (900)
Q Consensus 225 l~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~ 304 (900)
+++++++|.++|+||+||+||++|+||+|.|||++|.+||.|.+++|++.+++..++.++++++..++... ..++++
T Consensus 388 ~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~---~~~~l~ 464 (529)
T PRK07867 388 LAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKF---DPDAFA 464 (529)
T ss_pred EEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCC---CHHHHH
Confidence 99999999999999999999999999999999999999999999999999988778888999988765332 235778
Q ss_pred HHHHhh--CCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 305 SWVSSK--LPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 305 ~~l~~~--l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++++++ |+.+++|..|+++++||+|++|||+|++|+++...
T Consensus 465 ~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 465 EFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred HHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 888765 99999999999999999999999999999886643
No 83
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-37 Score=362.20 Aligned_cols=300 Identities=20% Similarity=0.284 Sum_probs=252.6
Q ss_pred CcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCCC
Q 002615 10 EELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHVP 88 (900)
Q Consensus 10 ~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~ 88 (900)
+++++..+|++|.+++.. ++..+..|++.++... ..++..+++.++++++|++.++|+++..++...... ..++
T Consensus 258 ~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~~~~ 332 (562)
T PRK12492 258 QEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITN---PRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFK--DLDF 332 (562)
T ss_pred CeEEEEecchHHHHHHHHHHHHHhhcCceEEEecC---CcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcc--cccc
Confidence 357788999999999754 6667788887776532 457889999999999999999999999988653222 2346
Q ss_pred CCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCC
Q 002615 89 SSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESD 168 (900)
Q Consensus 89 ~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 168 (900)
+++|.+++||+++++.+.+.|.+.+ ++++++.||+||++.+++...... .....++|+|++++.++|+|++
T Consensus 333 ~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--------~~~~~~~G~p~~~~~v~ivd~~ 403 (562)
T PRK12492 333 SALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGE--------LARLGTVGIPVPGTALKVIDDD 403 (562)
T ss_pred cceeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcc--------cccCCccceecCCCEEEEECCC
Confidence 8999999999999999999998876 799999999999987655332111 1134578999999999999876
Q ss_pred CC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEE
Q 002615 169 TV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIK 245 (900)
Q Consensus 169 ~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik 245 (900)
+. .++.|||+++|+.++.||+++|+.+.+.|. .++||+|||+|+++++|.++|+||+||+||
T Consensus 404 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~---------------~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~ 468 (562)
T PRK12492 404 GNELPLGERGELCIKGPQVMKGYWQQPEATAEALD---------------AEGWFKTGDIAVIDPDGFVRIVDRKKDLII 468 (562)
T ss_pred CCCCCCCCceEEEEeCCccccccccCchhhhhccc---------------CCCceecCcEEEECCCCeEEEecccCCeEE
Confidence 63 456799999999999999999998887763 257999999999999999999999999999
Q ss_pred ECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCC
Q 002615 246 INGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDS 325 (900)
Q Consensus 246 ~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~ 325 (900)
++|++|+|.+||+.|.+||.|.+++|++.++...++.+++++++..... ..++++++++++|+.|++|..++++++
T Consensus 469 ~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~i~~~~~~~l~~~~~P~~i~~~~~ 544 (562)
T PRK12492 469 VSGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL----SVEELKAYCKENFTGYKVPKHIVLRDS 544 (562)
T ss_pred ECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC----CHHHHHHHHHHhcccccCCcEEEEecc
Confidence 9999999999999999999999999999887766777888887654322 236899999999999999999999999
Q ss_pred cCCCCCCCcchhhhccc
Q 002615 326 LPMTSSGKVDYASLSAS 342 (900)
Q Consensus 326 lP~t~~GKidr~~L~~~ 342 (900)
||+|++||++|++|+++
T Consensus 545 ~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 545 LPMTPVGKILRRELRDI 561 (562)
T ss_pred CCCCCCCceeHHHHHhh
Confidence 99999999999999864
No 84
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-38 Score=370.81 Aligned_cols=336 Identities=16% Similarity=0.139 Sum_probs=248.5
Q ss_pred cCC-CCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHH--HcCeeEEEecHHHHHHHHHHHh
Q 002615 4 LYP-LHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQ--AYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 4 ~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~--~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.++ +.++|++++++|++|+.++..++.+++.|+++++..+.....+|..+++.++ ++++|++..+|+++..++....
T Consensus 228 ~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~ 307 (612)
T PRK12476 228 SIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRG 307 (612)
T ss_pred HhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhc
Confidence 355 7889999999999999999887777777777777654434458999999994 5899999999999888775321
Q ss_pred --hccCCCCCCCcCEEEEeccCCChhhHHHHHhhC-----CCceEEeecCccccccccceecccCCcc-------cc---
Q 002615 81 --SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLF-----PNISILNLYGSTEVSGDCTYFDCKRLPS-------IL--- 143 (900)
Q Consensus 81 --~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~-------~~--- 143 (900)
......++++|| +++||+++++++.+.+.+.| |..++++.||+||++..++.......+. ..
T Consensus 308 ~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g 386 (612)
T PRK12476 308 LPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAG 386 (612)
T ss_pred ChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCC
Confidence 111123468899 99999999999999998876 3356999999999876544322111000 00
Q ss_pred --------ccCCCCcceeeeccCCcEEEEecCC-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccC-
Q 002615 144 --------EMSTLKSVPIGLPISNCDIVLVESD-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNC- 210 (900)
Q Consensus 144 --------~~~~~~~~~~G~p~~~~~~~i~d~~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~- 210 (900)
........++|+|+++++++|+|++ + +.++.|||+++|+.++.||+++|+.|++.|.........+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~ 466 (612)
T PRK12476 387 RAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGS 466 (612)
T ss_pred CeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhcccccccc
Confidence 0000123478999999999999876 4 34667999999999999999999999998853211000000
Q ss_pred --cCCCCCcceEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhC-CCCeeE--EEEEEeecCCceEEEEE
Q 002615 211 --SVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRG-HPDVVD--TAVVSHKHQGELVILVA 285 (900)
Q Consensus 211 --~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~~~~l~~ 285 (900)
......++||+|||+|++ +||+|+|+||+||+||++|+||+|.|||++|.+ ||.|.+ ++|++.++.. ++.+++
T Consensus 467 ~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~ 544 (612)
T PRK12476 467 HADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVI 544 (612)
T ss_pred ccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEE
Confidence 001123579999999987 599999999999999999999999999999985 899999 6667776655 567888
Q ss_pred EEEecCCCCchHHHHHHHHHHHHhhCC-CCcc-CCEEEEcC--CcCCCCCCCcchhhhccccc
Q 002615 286 FIVLKEKKTSSEIFLSSIKSWVSSKLP-LAMI-PNRFVFMD--SLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 286 ~v~~~~~~~~~~~~~~~l~~~l~~~l~-~~~~-P~~~~~v~--~lP~t~~GKidr~~L~~~~~ 344 (900)
++++++.... ...++|.+++++.++ .+++ |..+++++ +||+|++|||+|++|++.+.
T Consensus 545 ~v~~~~~~~~--~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~ 605 (612)
T PRK12476 545 VAERAAGTSR--ADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYL 605 (612)
T ss_pred EEEecCCccc--ccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHH
Confidence 8887654321 112456666666665 3677 67788886 69999999999999987654
No 85
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9e-38 Score=363.14 Aligned_cols=315 Identities=19% Similarity=0.294 Sum_probs=248.3
Q ss_pred CCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC
Q 002615 5 YPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN 84 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~ 84 (900)
+.+...++++..+|++|..++...+.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.....
T Consensus 222 ~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-- 295 (579)
T PLN03102 222 WEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMR----HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLD-- 295 (579)
T ss_pred cCCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeec----cCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccc--
Confidence 34567789999999999999888888899999998885 457888999999999999999999999998753222
Q ss_pred CCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccC----Cccccc-cCCCCcceeeeccCC
Q 002615 85 MHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKR----LPSILE-MSTLKSVPIGLPISN 159 (900)
Q Consensus 85 ~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~----~~~~~~-~~~~~~~~~G~p~~~ 159 (900)
....++++.+++||+++++.+.+.+.+ + +.++++.||+||+++.++...... .+.... .........+.|+++
T Consensus 296 ~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 373 (579)
T PLN03102 296 LSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLAD 373 (579)
T ss_pred cCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccc
Confidence 122457889999999999999998866 4 789999999999986544321110 000000 000011223344444
Q ss_pred cEEEEecCCC----CC--CCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCc
Q 002615 160 CDIVLVESDT----VK--PDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGD 233 (900)
Q Consensus 160 ~~~~i~d~~~----~~--~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~ 233 (900)
+. +.+.+. +. +..|||+++|+.+++||+++|+.+.+.| .++||+|||+|++++||+
T Consensus 374 v~--i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f----------------~~gw~~TGDlg~~d~dG~ 435 (579)
T PLN03102 374 VD--VKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF----------------KHGWLNTGDVGVIHPDGH 435 (579)
T ss_pred eE--EeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh----------------ccCceecCceEEEcCCCe
Confidence 44 444322 11 2469999999999999999999888877 257999999999999999
Q ss_pred EEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchH-------HHHHHHHHH
Q 002615 234 LVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSE-------IFLSSIKSW 306 (900)
Q Consensus 234 l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~-------~~~~~l~~~ 306 (900)
++|+||.||+||++|++|+|.|||.+|.+||.|.+++|++.+++..++.++++|++.++....+ ....+++++
T Consensus 436 l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 515 (579)
T PLN03102 436 VEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEY 515 (579)
T ss_pred EEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHH
Confidence 9999999999999999999999999999999999999999988877778999998775432110 124679999
Q ss_pred HHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 307 VSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 307 l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
++++||.|++|..++++++||+|++|||+|++|++++..
T Consensus 516 ~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 516 CRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred HHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 999999999999999999999999999999999887554
No 86
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.3e-37 Score=358.11 Aligned_cols=309 Identities=22% Similarity=0.307 Sum_probs=261.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|+++..+|++|+.++.. ++.++..|+++++.++ ..++..+++.|+++++|++.++|+++..++.....
T Consensus 196 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~ 272 (508)
T TIGR02262 196 NTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE---RPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNL 272 (508)
T ss_pred HhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC---CCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccc
Confidence 3568899999999999999999854 7888999999999853 35789999999999999999999998887654221
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
......++|.+++||+++++++.+.|.+.+ ++++++.||+||++..++.... ......++|+|++++.
T Consensus 273 --~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~---------~~~~~~~~G~~~~g~~ 340 (508)
T TIGR02262 273 --PAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNLP---------GDVRYGTSGKPVPGYR 340 (508)
T ss_pred --cccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCCc---------cCCCCCCcCCCCCCcE
Confidence 112357899999999999999999999988 7899999999999865443211 1123457899999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++|+++ +++..|||+++|+.++.||+++++.+...| .++||+|||+++++++|.++++|
T Consensus 341 v~i~d~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~----------------~~~~~~TGD~~~~~~~g~~~~~g 404 (508)
T TIGR02262 341 LRLVGDGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF----------------QGEWTRSGDKYVRNDDGSYTYAG 404 (508)
T ss_pred EEEECCCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh----------------hcCceeccceEEEcCCccEEEec
Confidence 99998655 345679999999999999999998887766 25799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.||+||++|.+|+|.+||+.|.++++|.++++++..+......+++++++.......+...++|+++++++|+.+++|.
T Consensus 405 R~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~ 484 (508)
T TIGR02262 405 RTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPR 484 (508)
T ss_pred cccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCc
Confidence 99999999999999999999999999999999999877666667888888766543333456789999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSAS 342 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~ 342 (900)
.++.++++|+|++||++|++|+++
T Consensus 485 ~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 485 WIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred eEEEecCCCCCCCCcEehhhccCC
Confidence 999999999999999999998764
No 87
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-38 Score=363.71 Aligned_cols=307 Identities=19% Similarity=0.245 Sum_probs=257.5
Q ss_pred CCCCC-CcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 5 YPLHG-EELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 5 ~~~~~-~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+++.+ ++++++++|++|.+++.. ++.+++.|+++++.+ ..++..+++.|+++++|++.++|+++..++......
T Consensus 243 ~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 318 (563)
T PRK06710 243 YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP----KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLK 318 (563)
T ss_pred cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC----CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccc
Confidence 34444 458899999999988755 667899999999986 468899999999999999999999999887643221
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
...+++||.+++||+++++++.+.+.+.+ ++.+++.||+||++.++...... ......++|+|++++.+
T Consensus 319 --~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~ 387 (563)
T PRK06710 319 --EYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLW--------EKRVPGSIGVPWPDTEA 387 (563)
T ss_pred --cCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCccccccCccc--------ccccCCccCCCCCCCeE
Confidence 12357999999999999999999998877 78899999999998754422110 11134578999999999
Q ss_pred EEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 163 VLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 163 ~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++++. +.+..|||+++|+.++.||+++++.+...| .++||+|||+++++++|.++++|
T Consensus 388 ~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~----------------~~g~~~TGD~~~~~~~g~~~~~G 451 (563)
T PRK06710 388 MIMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVL----------------QDGWLHTGDVGYMDEDGFFYVKD 451 (563)
T ss_pred EEEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhc----------------ccCcccccceEEEcCCCcEEEee
Confidence 9997433 345679999999999999999998887665 25799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPN 318 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 318 (900)
|.||+||++|++|+|.+||++|.++|.|.+++|++.++...++.++++++..+..... .++++++++++||.+++|.
T Consensus 452 R~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~ 528 (563)
T PRK06710 452 RKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECS---EEELNQFARKYLAAYKVPK 528 (563)
T ss_pred ccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCCc
Confidence 9999999999999999999999999999999999988877677888888877654322 3689999999999999999
Q ss_pred EEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 319 RFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 319 ~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
.++++++||+|++||++|++|+++...
T Consensus 529 ~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 529 VYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred EEEEcccCCCCccchhhHHHHHHHHhh
Confidence 999999999999999999999876543
No 88
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-37 Score=358.06 Aligned_cols=305 Identities=17% Similarity=0.248 Sum_probs=246.7
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|+++..+|++|..++.. ++.+|..|+++++.+ ..++..+++.++++++|++..+|+.+..++.....
T Consensus 184 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~ 259 (540)
T PRK13388 184 ERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPA----KFSASGFLDDVRRYGATYFNYVGKPLAYILATPER 259 (540)
T ss_pred HHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECC----CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC
Confidence 4578999999999999999999876 456899999999885 46789999999999999999999999888754322
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.. ...+++|. ++ |+++++.....+.+.+ +.+++|.||+||++..++... .....++|+|+++++
T Consensus 260 ~~--~~~~~l~~-~~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-----------~~~~~~vG~p~~g~~ 323 (540)
T PRK13388 260 PD--DADNPLRV-AF-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVREP-----------GTPPGSIGRGAPGVA 323 (540)
T ss_pred cc--ccccceEE-EE-CCCCCHHHHHHHHHHh-CCceecccccccccceeecCC-----------CCCCCCCCCCCCCcE
Confidence 11 11345664 33 6667888888888887 789999999999986554211 113457899999976
Q ss_pred EE-----------EecCCCC----CCCccEEEEc-cccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCce
Q 002615 162 IV-----------LVESDTV----KPDEGEIYAG-GLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDF 225 (900)
Q Consensus 162 ~~-----------i~d~~~~----~~~~GEl~v~-g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl 225 (900)
+. ++|+++. .+..|||+++ |++++.||+++|+.+.+.| .++||+|||+
T Consensus 324 i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~----------------~~g~~~TGD~ 387 (540)
T PRK13388 324 IYNPETLTECAVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM----------------RHGMYWSGDL 387 (540)
T ss_pred EEcCCCCccccceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHh----------------hcCceeccce
Confidence 53 2232221 2347999998 9999999999999888776 2479999999
Q ss_pred EEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHH
Q 002615 226 ARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKS 305 (900)
Q Consensus 226 ~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~ 305 (900)
|++++||.++++||+||+||++|++|+|.|||++|.+||.|.+|+|++.++...++.+++++++.+..... .+++++
T Consensus 388 ~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~ 464 (540)
T PRK13388 388 AYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFD---PDAFAA 464 (540)
T ss_pred EEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCC---HHHHHH
Confidence 99999999999999999999999999999999999999999999999988776666777888776543222 356778
Q ss_pred HHHh--hCCCCccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 306 WVSS--KLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 306 ~l~~--~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
+++. .||.+++|..++++++||+|++|||+|++|++.....
T Consensus 465 ~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 465 FLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred HHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 8875 4999999999999999999999999999998865443
No 89
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.7e-37 Score=350.40 Aligned_cols=292 Identities=23% Similarity=0.354 Sum_probs=246.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.++++++|+++..+|++|..++..++.++..|+++++.++ . ..+++.|+++++|++.++|++++.++.....
T Consensus 145 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~----~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~- 217 (436)
T TIGR01923 145 ENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK----F--NQLLEMIANERVTHISLVPTQLNRLLDEGGH- 217 (436)
T ss_pred hhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch----H--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCC-
Confidence 46789999999999999999999889999999999999863 2 3889999999999999999999998765321
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
.+++|.+++|||++++++.+.+.+. ++.+++.||+||++..++....... ....++|+|++++++
T Consensus 218 -----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~G~~~~~~~~ 282 (436)
T TIGR01923 218 -----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEML--------HARPDVGRPLAGREI 282 (436)
T ss_pred -----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCcccc--------ccccCCCccCCCcEE
Confidence 2689999999999999999988764 8899999999999876553322110 112248999999999
Q ss_pred EEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCC
Q 002615 163 VLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDR 242 (900)
Q Consensus 163 ~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd 242 (900)
++..++. .+.|||+++|+.++.||+++++.+...+ .++||+|||++++++||.+++.||.||
T Consensus 283 ~i~~~~~--~~~Gel~v~~~~~~~gy~~~~~~~~~~~----------------~~~~~~TGD~~~~~~dg~~~~~GR~~d 344 (436)
T TIGR01923 283 KIKVDNK--EGHGEIMVKGANLMKGYLYQGELTPAFE----------------QQGWFNTGDIGELDGEGFLYVLGRRDD 344 (436)
T ss_pred EEEeCCC--CCceEEEEECCccchhhCCChhhhhhhh----------------cCCCeeccceEEEcCCCCEEEeccccC
Confidence 9843222 3779999999999999999877765433 357999999999999999999999999
Q ss_pred cEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEE
Q 002615 243 TIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVF 322 (900)
Q Consensus 243 ~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~ 322 (900)
+||++|++|+|.+||++|.++|.|.+++|++.++...+..+++++++.... ..+++.+++++.|+.+++|..+++
T Consensus 345 ~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-----~~~~l~~~l~~~l~~~~~p~~i~~ 419 (436)
T TIGR01923 345 LIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDI-----SQAKLIAYLTEKLAKYKVPIAFEK 419 (436)
T ss_pred eEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCC-----CHHHHHHHHHHhhhCCCCCeEEEE
Confidence 999999999999999999999999999999887766566778888876531 235788899999999999999999
Q ss_pred cCCcCCCCCCCcchhhh
Q 002615 323 MDSLPMTSSGKVDYASL 339 (900)
Q Consensus 323 v~~lP~t~~GKidr~~L 339 (900)
+++||+|++||++|++|
T Consensus 420 ~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 420 LDELPYNASGKILRNQL 436 (436)
T ss_pred ecCCCCCCCCceecccC
Confidence 99999999999999876
No 90
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.3e-38 Score=368.96 Aligned_cols=313 Identities=17% Similarity=0.184 Sum_probs=244.8
Q ss_pred CCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc----
Q 002615 7 LHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ---- 82 (900)
Q Consensus 7 ~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~---- 82 (900)
+.++|++++.+|++|.++....+.+++.|+++++.+ .++..+++.|+++++|+++++|++++.+.......
T Consensus 263 ~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~ 337 (660)
T PLN02861 263 ATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSG 337 (660)
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhcc
Confidence 578999999999999999876666899999998873 47889999999999999999999999886421100
Q ss_pred -----------------------------cCC---------CCC-CCcCEEEEeccCCChhhHHHHHhhCCCceEEeecC
Q 002615 83 -----------------------------HNM---------HVP-SSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYG 123 (900)
Q Consensus 83 -----------------------------~~~---------~~~-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG 123 (900)
... ..+ .+||.+++||+++++++. .|.+.++...+++.||
T Consensus 338 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG 416 (660)
T PLN02861 338 GMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYG 416 (660)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecc
Confidence 000 001 589999999999999975 4666664557999999
Q ss_pred ccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC--CC----CCCCccEEEEccccccccccCCCCCCcc
Q 002615 124 STEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES--DT----VKPDEGEIYAGGLCLSNGYFSESTFMPS 197 (900)
Q Consensus 124 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~--~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~ 197 (900)
+||+++.++..... ......++|+|+++++++++|. ++ .+++.|||+|+|++++.||+++|+.|++
T Consensus 417 ~TE~~~~~~~~~~~--------~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~ 488 (660)
T PLN02861 417 LTESCGGCFTSIAN--------VFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEE 488 (660)
T ss_pred hhhhhhceeecccc--------cCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHh
Confidence 99998655432111 0113467999999999999872 12 2345799999999999999999999998
Q ss_pred chhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEeec
Q 002615 198 EYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHKH 276 (900)
Q Consensus 198 ~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~ 276 (900)
.|. ++||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++.+.
T Consensus 489 ~f~----------------dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~ 552 (660)
T PLN02861 489 VLI----------------DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF 552 (660)
T ss_pred hhh----------------ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC
Confidence 882 579999999999999999999999999998 799999999999999999999999998763
Q ss_pred CCceEEEEEEEEecCCC-----------CchH------HHHHHHHHHHHh-----hCCCCccCCEEEEcC-Cc-----CC
Q 002615 277 QGELVILVAFIVLKEKK-----------TSSE------IFLSSIKSWVSS-----KLPLAMIPNRFVFMD-SL-----PM 328 (900)
Q Consensus 277 ~~~~~~l~~~v~~~~~~-----------~~~~------~~~~~l~~~l~~-----~l~~~~~P~~~~~v~-~l-----P~ 328 (900)
. ..++|+|++.... .... .....+.+.+++ .|+.+..+..+.+++ .| ++
T Consensus 553 ~---~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~l 629 (660)
T PLN02861 553 E---SFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLI 629 (660)
T ss_pred c---ceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcC
Confidence 2 3688898875321 0001 111223333332 489999999998865 46 89
Q ss_pred CCCCCcchhhhccccccccccccC
Q 002615 329 TSSGKVDYASLSASTSFTISAQHD 352 (900)
Q Consensus 329 t~~GKidr~~L~~~~~~~~~~~~~ 352 (900)
|+++|+.|+.+.+.|+..++..|.
T Consensus 630 T~t~K~~R~~i~~~y~~~I~~lY~ 653 (660)
T PLN02861 630 TPTFKLKRPQLLKYYKDCIDQLYS 653 (660)
T ss_pred CHHHhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999988877665553
No 91
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.3e-37 Score=361.26 Aligned_cols=312 Identities=20% Similarity=0.265 Sum_probs=258.4
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..++++++|+++..+|++|..++. .++.+++.|+++++.+ ..++..+++.++++++|++..+|+++..++.....
T Consensus 221 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~ 296 (547)
T PRK06087 221 ARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD----IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEK 296 (547)
T ss_pred HhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC----CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhcccc
Confidence 346788999999999999999875 4888999999999986 56899999999999999999888777766654432
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
. ...+++||.+++|||++++++.+.+.+. ++++++.||+||++..+...... .......++|+|++++.
T Consensus 297 ~--~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~-------~~~~~~~~~G~~~~~~~ 365 (547)
T PRK06087 297 Q--PADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDD-------PLSRFMHTDGYAAAGVE 365 (547)
T ss_pred C--CCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCc-------chhhcCCcCCccCCCce
Confidence 2 2346899999999999999999888764 78999999999998665432110 00112346899999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++++|+++ +.+..|||+++|+.++.||+++++.+...|. .++||+|||+++++++|+++++|
T Consensus 366 ~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~---------------~~g~~~TGDl~~~~~~g~l~i~G 430 (547)
T PRK06087 366 IKVVDEARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALD---------------EEGWYYSGDLCRMDEAGYIKITG 430 (547)
T ss_pred EEEEcCCCCCCcCCCcceEEEecccccccccCCHHHHHHHhC---------------CCCCcCcCceEEECCCCCEEEEe
Confidence 99998765 3456799999999999999999988877662 25799999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHH-hhCCCCccC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVS-SKLPLAMIP 317 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~-~~l~~~~~P 317 (900)
|.||+||++|++|+|.+||++|.++|.|.+++|++.++...++.+++++++...... ...+++.+++. +.++.+++|
T Consensus 431 R~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~l~~~~~P 508 (547)
T PRK06087 431 RKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHS--LTLEEVVAFFSRKRVAKYKYP 508 (547)
T ss_pred cchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCC--CCHHHHHHHHHhccccccCCC
Confidence 999999999999999999999999999999999998877777788899987653211 12356777764 689999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
..|.++++||+|++||++|++|++.....
T Consensus 509 ~~i~~v~~iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 509 EHIVVIDKLPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred eEEEEeccCCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999998765443
No 92
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-37 Score=355.52 Aligned_cols=315 Identities=20% Similarity=0.258 Sum_probs=258.2
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
..++++++|+++..+|++|..++...+.++..|++++++.. ..++..+++.++++++|++.++|++++.+.......
T Consensus 213 ~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~ 289 (542)
T PRK06018 213 DALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGA---KLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE 289 (542)
T ss_pred hhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCc---CCCHHHHHHHHHhcCCceeecCcHHHHHHHhccccc
Confidence 45778999999999999999998877889999999998642 467889999999999999999999999988755432
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccC--CCCcceeeeccCCc
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMS--TLKSVPIGLPISNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~p~~~~ 160 (900)
. ..+++||.+++|||++++.+++.|++ + ++.+++.||+||++.+++.............. .....++|+|.+++
T Consensus 290 ~--~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~ 365 (542)
T PRK06018 290 G--LKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV 365 (542)
T ss_pred C--CCcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc
Confidence 2 23679999999999999999999998 5 88999999999998766543211100000000 01235789999999
Q ss_pred EEEEecCCCCCC-----CccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEE
Q 002615 161 DIVLVESDTVKP-----DEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLV 235 (900)
Q Consensus 161 ~~~i~d~~~~~~-----~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~ 235 (900)
+++++|+++.+. ..|||+++|+.++.||++.. ...+ ..++||+|||+++++++|+++
T Consensus 366 ~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~---------------~~~~~~~TGDl~~~~~~g~~~ 427 (542)
T PRK06018 366 EMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEIL---------------DDDGFFDTGDVATIDAYGYMR 427 (542)
T ss_pred EEEEECCCCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEe---------------cCCcEEEcCCEEEEcCCccEE
Confidence 999998766321 35999999999999999832 1111 136899999999999999999
Q ss_pred EEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCc
Q 002615 236 FLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAM 315 (900)
Q Consensus 236 ~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 315 (900)
++||.||+||++|++|+|.|||..+.+||.|.+|+|++.++...++.+.+++++.++.... .++++++++++++.++
T Consensus 428 ~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~ 504 (542)
T PRK06018 428 ITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETAT---REEILKYMDGKIAKWW 504 (542)
T ss_pred EEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCC---HHHHHHHHHhhCcccc
Confidence 9999999999999999999999999999999999999988876666788888876654322 3579999999999999
Q ss_pred cCCEEEEcCCcCCCCCCCcchhhhcccccc
Q 002615 316 IPNRFVFMDSLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 316 ~P~~~~~v~~lP~t~~GKidr~~L~~~~~~ 345 (900)
+|..++++++||+|++||++|++|++.+..
T Consensus 505 ~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 505 MPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred CCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 999999999999999999999999876543
No 93
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5.2e-37 Score=354.10 Aligned_cols=302 Identities=20% Similarity=0.244 Sum_probs=254.2
Q ss_pred CCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
..+.++|+++..+|++|..+. ..++.++..|+++++.+ ..++..+++.++++++|++.++|++++.++.......
T Consensus 209 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 284 (517)
T PRK08008 209 CALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLE----KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSAN 284 (517)
T ss_pred cCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcc----ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccc
Confidence 356889999999999987655 55888999999999986 5688999999999999999999999998875432221
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....+||.+.++ +++++.+.+.+.+.+ ++++++.||+||++..++..... ......++|.|+++++++
T Consensus 285 --~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--------~~~~~~~~G~~~~g~~~~ 352 (517)
T PRK08008 285 --DRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDRPG--------DKRRWPSIGRPGFCYEAE 352 (517)
T ss_pred --cccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEeeccccccccccccCCcc--------ccccCCccccCCCCcEEE
Confidence 123578888775 478999999988887 78999999999998655432211 112345799999999999
Q ss_pred EecCCC---CCCCccEEEEcc---ccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 164 LVESDT---VKPDEGEIYAGG---LCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 164 i~d~~~---~~~~~GEl~v~g---~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++|+++ +.+..|||+++| +++++||+++++.+.+.|.. ++||+|||+++++++|.++|+
T Consensus 353 i~d~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~---------------~g~~~TGDl~~~~~~g~~~~~ 417 (517)
T PRK08008 353 IRDDHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEA---------------DGWLHTGDTGYVDEEGFFYFV 417 (517)
T ss_pred EECCCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccC---------------CCCeeccceEEECCCCcEEEe
Confidence 998766 345679999997 58999999999998887742 579999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||.||+||++|++|+|.+||+++.+|+.|.+++|++.++...+..+.++++++...... .++|+++++++++.|++|
T Consensus 418 GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P 494 (517)
T PRK08008 418 DRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLS---EEEFFAFCEQNMAKFKVP 494 (517)
T ss_pred ecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCC
Confidence 99999999999999999999999999999999999998877777889999987654322 368999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~ 340 (900)
..+++++++|+|++||++|+.|+
T Consensus 495 ~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 495 SYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred cEEEEeccCCCCCccceehhhcC
Confidence 99999999999999999999874
No 94
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.7e-37 Score=358.73 Aligned_cols=311 Identities=19% Similarity=0.223 Sum_probs=241.9
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|+++..+|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++.++|++++.++.....
T Consensus 233 ~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~ 308 (600)
T PRK08279 233 GLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRR----KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPK 308 (600)
T ss_pred HhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcC----CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCC
Confidence 4578999999999999999999876 556778888888875 57889999999999999999999999988765332
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccC---
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPIS--- 158 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~--- 158 (900)
.. ....++|. ++|+++++++++.|.+.++...++|.||+||++..++.. .. ...++|++.+
T Consensus 309 ~~--~~~~~l~~--~~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~--~~----------~~~~~g~~~~~~~ 372 (600)
T PRK08279 309 PT--DRDHRLRL--MIGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV--FN----------FDGTVGRVPLWLA 372 (600)
T ss_pred cc--ccCcceeE--EecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc--CC----------CCccccccccccc
Confidence 21 12356665 458889999999999999767899999999987533211 10 1223454443
Q ss_pred -CcEE---------EEecCCC-----CCCCccEEE--EccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEe
Q 002615 159 -NCDI---------VLVESDT-----VKPDEGEIY--AGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFR 221 (900)
Q Consensus 159 -~~~~---------~i~d~~~-----~~~~~GEl~--v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 221 (900)
+..+ .+.+.++ ++++.|||+ +.|++++.|| ++++.+.+.|...... .+++||+
T Consensus 373 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~---------~~~~~~~ 442 (600)
T PRK08279 373 HPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFK---------KGDAWFN 442 (600)
T ss_pred ccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccC---------CCCceEe
Confidence 2222 2222221 345679998 7899999999 8888888877653221 2468999
Q ss_pred cCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCC-ceEEEEEEEEecCCCCchHHHH
Q 002615 222 TGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQG-ELVILVAFIVLKEKKTSSEIFL 300 (900)
Q Consensus 222 TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~-~~~~l~~~v~~~~~~~~~~~~~ 300 (900)
|||+|++++||.++|+||.||+||++|+||+|.|||++|.+||+|.+|+|++.+... .+...+++++..++.. ...
T Consensus 443 TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~---~~~ 519 (600)
T PRK08279 443 TGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE---FDL 519 (600)
T ss_pred ecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCcc---CCH
Confidence 999999999999999999999999999999999999999999999999999876543 2233455555543222 224
Q ss_pred HHHHHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 301 SSIKSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 301 ~~l~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
++++++++++||.|++|..++++++||+|++||++|++|+++....
T Consensus 520 ~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 520 AALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred HHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 6899999999999999999999999999999999999998766544
No 95
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=6e-37 Score=347.36 Aligned_cols=284 Identities=22% Similarity=0.313 Sum_probs=242.0
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++..+|++|..++..++.+|..|+++++.+. ..+++.+ .++|.+.++|+++..++.....
T Consensus 169 ~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~-------~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~- 238 (458)
T PRK09029 169 SLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK-------QPLEQAL--AGCTHASLVPTQLWRLLDNRSE- 238 (458)
T ss_pred hcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh-------HHHHHHH--hhceeeecChHHHHHHHhcccc-
Confidence 45788999999999999999998878889999999999852 3355666 3799999999999988765332
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+||.+++||+++++.+.+.+.+. +.++++.||+||++...+.... ....++|+|++++.+
T Consensus 239 -----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~-----------~~~~~~G~~~~~~~~ 300 (458)
T PRK09029 239 -----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA-----------DGLAGVGSPLPGREV 300 (458)
T ss_pred -----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC-----------CCCCCCCCCCCCCEE
Confidence 3479999999999999999988764 7899999999999864432211 023458999999999
Q ss_pred EEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCC
Q 002615 163 VLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDR 242 (900)
Q Consensus 163 ~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd 242 (900)
++.+ |||+|+|+.++.||+++++.+.... .++||+|||+|+++ ||.++|+||+||
T Consensus 301 ~i~~--------gel~v~g~~~~~gY~~~~~~~~~~~----------------~~~~~~TGD~~~~~-~g~l~~~gR~~d 355 (458)
T PRK09029 301 KLVD--------GEIWLRGASLALGYWRQGQLVPLVN----------------DEGWFATRDRGEWQ-NGELTILGRLDN 355 (458)
T ss_pred EEeC--------CEEEEecCceeeeeecCcccccccc----------------CCCccCCCCcEEEe-CCEEEEeccccc
Confidence 9986 9999999999999999887764321 36899999999999 999999999999
Q ss_pred cEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEE
Q 002615 243 TIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVF 322 (900)
Q Consensus 243 ~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~ 322 (900)
+||++|++|+|.|||++|.+||.|.+++|++.++...++.++++++.... ...++|+++++++||.|++|..+++
T Consensus 356 ~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~-----~~~~~l~~~~~~~l~~~~~P~~~~~ 430 (458)
T PRK09029 356 LFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSE-----AAVVNLAEWLQDKLARFQQPVAYYL 430 (458)
T ss_pred ceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCcc-----cCHHHHHHHHHhhchhccCCeEEEE
Confidence 99999999999999999999999999999999888777788888886632 2346899999999999999999999
Q ss_pred cCCcCCCCCCCcchhhhccccc
Q 002615 323 MDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 323 v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++++|+|++||++|+.|+++..
T Consensus 431 ~~~~p~t~~gKi~r~~L~~~~~ 452 (458)
T PRK09029 431 LPPELKNGGIKISRQALKEWVA 452 (458)
T ss_pred ecccccCcCCCcCHHHHHHHHH
Confidence 9999999999999999987655
No 96
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=8.3e-37 Score=384.58 Aligned_cols=305 Identities=15% Similarity=0.162 Sum_probs=252.6
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.++++++|++++.+|++|..++ ..++.++..|+++++.+. ..++..+.+.++++++|++.++|++++.+.+...
T Consensus 827 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~- 902 (1140)
T PRK06814 827 ARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPS---PLHYRIIPELIYDTNATILFGTDTFLNGYARYAH- 902 (1140)
T ss_pred HhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecC---cccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc-
Confidence 45788999999999999999998 668999999999998752 3456778899999999999999999998876422
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
..+++++|.+++|||++++++.+.+.+.+ +++++|.||+||++..++.... ......++|+|+++++
T Consensus 903 ---~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~---------~~~~~~~vG~p~~g~~ 969 (1140)
T PRK06814 903 ---PYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALNTP---------MHNKAGTVGRLLPGIE 969 (1140)
T ss_pred ---cccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEecCC---------CCCCCCcCCccCCCCe
Confidence 23468999999999999999999999887 7899999999999876553211 1124567999999999
Q ss_pred EEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccC
Q 002615 162 IVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKD 241 (900)
Q Consensus 162 ~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~d 241 (900)
+++.+.++ .++.|||+++|+.++.||+++++... +. ...++||+|||++++|+||+++++||.|
T Consensus 970 ~~~~~~~~-~~~~Gel~v~g~~~~~gY~~~~~~~~--~~-------------~~~~g~~~TGDl~~~d~dG~l~~~GR~~ 1033 (1140)
T PRK06814 970 YRLEPVPG-IDEGGRLFVRGPNVMLGYLRAENPGV--LE-------------PPADGWYDTGDIVTIDEEGFITIKGRAK 1033 (1140)
T ss_pred EEEeecCC-CCCceEEEEeCCCcchhhcCCCCCCc--cc-------------cCCCCeEecCCEEEECCCCeEEEEeccc
Confidence 99986432 45679999999999999998764221 10 0136899999999999999999999999
Q ss_pred CcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhh-CCCCccCCEE
Q 002615 242 RTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSK-LPLAMIPNRF 320 (900)
Q Consensus 242 d~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~P~~~ 320 (900)
|+||++|+||+|.|||+++.+|+.+.+++|++.+++..++.+++++... . ...+++++++++. +|.|++|..+
T Consensus 1034 d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~-~-----~~~~~l~~~~~~~~l~~~~~P~~i 1107 (1140)
T PRK06814 1034 RFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTAS-D-----ATRAAFLAHAKAAGASELMVPAEI 1107 (1140)
T ss_pred CeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCC-C-----cCHHHHHHHHHHcCCCcccCCcEE
Confidence 9999999999999999999999999999999988877667777665421 1 1235788888864 9999999999
Q ss_pred EEcCCcCCCCCCCcchhhhccccccc
Q 002615 321 VFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 321 ~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
+.++++|+|++||+||++|++++...
T Consensus 1108 ~~v~~lP~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1108 ITIDEIPLLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred EEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 99999999999999999998865543
No 97
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.5e-36 Score=351.63 Aligned_cols=300 Identities=20% Similarity=0.260 Sum_probs=251.6
Q ss_pred CCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCC
Q 002615 8 HGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMH 86 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~ 86 (900)
...++++...|++|..++.. ++.++..|+++++.. ..++..+++.|+++++|++.++|+++..++..... ...
T Consensus 236 ~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~ 309 (541)
T TIGR03205 236 GDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQ----RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSL--EKR 309 (541)
T ss_pred CCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC----CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccc--ccc
Confidence 34579999999999988755 788999999998875 56899999999999999999999999988753221 123
Q ss_pred CCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEec
Q 002615 87 VPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVE 166 (900)
Q Consensus 87 ~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d 166 (900)
.+++||.++.||+++++++.+.+.+.+ +.++++.||+||++..++...... .....++|+|++++.+++.+
T Consensus 310 ~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~v~~ 380 (541)
T TIGR03205 310 DLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEG--------PDKPGSIGLMLPGIELDVVS 380 (541)
T ss_pred CccccceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCC--------CCCCCCcceeccCceeEEEe
Confidence 367899999999999999999888877 689999999999987665432111 11345789999999988753
Q ss_pred --CCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccC
Q 002615 167 --SDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKD 241 (900)
Q Consensus 167 --~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~d 241 (900)
+++ +.++.|||+++|+.++.||+++|+.+.+.|. .+||+|||+++++++|+++++||.|
T Consensus 381 ~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~----------------~~~~~TGD~~~~~~~g~l~i~GR~~ 444 (541)
T TIGR03205 381 LDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFV----------------GDRFLTGDIGYMDTDGYFFLVDRKK 444 (541)
T ss_pred cCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhc----------------cCCcccCceEEEcCCceEEEEcccc
Confidence 332 3456799999999999999999998887762 4689999999999999999999999
Q ss_pred CcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEE
Q 002615 242 RTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFV 321 (900)
Q Consensus 242 d~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~ 321 (900)
|+||++|++|+|.+||+++.+|+.|.+++|++.+++..++.+++++++...... ...++++++++++|+.|++|..++
T Consensus 445 ~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~ 522 (541)
T TIGR03205 445 DMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKP--FSLDELRAFLAGKLGKHELPVAVE 522 (541)
T ss_pred CeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCCc--CCHHHHHHHHHhhcccccCCcEEE
Confidence 999999999999999999999999999999998877666788888887754321 123678999999999999999999
Q ss_pred EcCCcCCCCCCCcchhhhc
Q 002615 322 FMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 322 ~v~~lP~t~~GKidr~~L~ 340 (900)
++++||+|++||++|++|+
T Consensus 523 ~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 523 FVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EeccCCCCcccceeHhhcC
Confidence 9999999999999999874
No 98
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-36 Score=354.92 Aligned_cols=307 Identities=19% Similarity=0.222 Sum_probs=243.8
Q ss_pred CCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc----
Q 002615 8 HGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH---- 83 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~---- 83 (900)
.+.|++++.+|++|.+++...+.+++.|+++++.+ .++..+++.|+++++|+++++|.+++.+........
T Consensus 345 ~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~-----~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~ 419 (746)
T PTZ00342 345 YNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWS-----KDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLP 419 (746)
T ss_pred CCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeC-----CCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcC
Confidence 35689999999999999987888999999999875 278899999999999999999999999875321100
Q ss_pred ------------------------------------CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCcccc
Q 002615 84 ------------------------------------NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEV 127 (900)
Q Consensus 84 ------------------------------------~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~ 127 (900)
.....++||.+++||+|+++++.+.|.+.+ ++.+++.||+||+
T Consensus 420 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt 498 (746)
T PTZ00342 420 PLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTET 498 (746)
T ss_pred HHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcc
Confidence 000126899999999999999999998877 7899999999999
Q ss_pred ccccceecccCCccccccCCCCcceeeecc-CCcEEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhcc
Q 002615 128 SGDCTYFDCKRLPSILEMSTLKSVPIGLPI-SNCDIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKL 202 (900)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~ 202 (900)
++.++.... ......++|+|+ ++++++++|.+. ..++.|||+++|++++.||+++|+.|++.|..
T Consensus 499 ~~~~~~~~~---------~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~- 568 (746)
T PTZ00342 499 TGPIFVQHA---------DDNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTE- 568 (746)
T ss_pred cceeeeccC---------CCCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCc-
Confidence 866553221 112557899998 999999997332 23456999999999999999999999998843
Q ss_pred CCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEeecCCceE
Q 002615 203 HNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELV 281 (900)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 281 (900)
++||+|||+|++|+||+|+|+||+||+||+ +|++|+|.+||+++.+||.|.+|+|++.... .
T Consensus 569 --------------dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~ 631 (746)
T PTZ00342 569 --------------DGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSM---D 631 (746)
T ss_pred --------------CCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCc---c
Confidence 689999999999999999999999999997 7999999999999999999999999986432 2
Q ss_pred EEEEEEEecCCC------------------Cch-H----------HHHHHHHHHH-----HhhCCCCccCCEEEEcCC-c
Q 002615 282 ILVAFIVLKEKK------------------TSS-E----------IFLSSIKSWV-----SSKLPLAMIPNRFVFMDS-L 326 (900)
Q Consensus 282 ~l~~~v~~~~~~------------------~~~-~----------~~~~~l~~~l-----~~~l~~~~~P~~~~~v~~-l 326 (900)
.++|+|+++... ... + .+.+.+++.+ +..|+.|.+++.|.++.+ |
T Consensus 632 ~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~ 711 (746)
T PTZ00342 632 GPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVW 711 (746)
T ss_pred ccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCC
Confidence 578888775310 000 0 1122222222 236999999999988753 3
Q ss_pred ----CCCCCCCcchhhhcccccccc
Q 002615 327 ----PMTSSGKVDYASLSASTSFTI 347 (900)
Q Consensus 327 ----P~t~~GKidr~~L~~~~~~~~ 347 (900)
-+||+.|+.|+.+.+.|+..+
T Consensus 712 t~~~~lTpt~KlkR~~v~~~y~~~i 736 (746)
T PTZ00342 712 DTNNYLTPTFKVKRFYVFKDYAFFI 736 (746)
T ss_pred CCCCccChhhhhhHHHHHHHHHHHH
Confidence 289999999999998776443
No 99
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.2e-36 Score=354.32 Aligned_cols=303 Identities=21% Similarity=0.235 Sum_probs=250.9
Q ss_pred CCCC-cEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC
Q 002615 7 LHGE-ELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN 84 (900)
Q Consensus 7 ~~~~-d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~ 84 (900)
+.++ ++++..+|++|.+++.. .+.++..|++.++... ..++..+++.++++++|++.++|+++..+.+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-- 324 (560)
T PRK08751 250 LEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISN---PRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFD-- 324 (560)
T ss_pred cCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecC---cCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcC--
Confidence 3344 57788899999988754 6677778888777642 357889999999999999999999999888643221
Q ss_pred CCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEE
Q 002615 85 MHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVL 164 (900)
Q Consensus 85 ~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 164 (900)
..++++||.+++||+++++.+.+.|.+.+ ++.+++.||+||++..++...... .....++|.|++++.+++
T Consensus 325 ~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--------~~~~~~vG~~~~~~~v~i 395 (560)
T PRK08751 325 QIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTL--------KEYNGSIGLPIPSTDACI 395 (560)
T ss_pred CcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccc--------cccCCCcCccCCCceEEE
Confidence 23467999999999999999999998877 789999999999987654322110 113457899999999999
Q ss_pred ecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccC
Q 002615 165 VESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKD 241 (900)
Q Consensus 165 ~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~d 241 (900)
+|+++ +.+..|||+++|+.+++||+++|+.+...|. .++||+|||+|+++++|.++++||.|
T Consensus 396 ~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~---------------~~g~~~TGD~~~~~~~g~l~i~GR~~ 460 (560)
T PRK08751 396 KDDAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMD---------------ADGWLHTGDIARMDEQGFVYIVDRKK 460 (560)
T ss_pred ECCCCCCCCCCCceEEEEecCccchhhcCChhhhhhccc---------------cCCCccccceEEEcCCceEEEEeech
Confidence 98765 3456799999999999999999998877662 25799999999999999999999999
Q ss_pred CcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEE
Q 002615 242 RTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFV 321 (900)
Q Consensus 242 d~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~ 321 (900)
|+||++|++|+|.+||++|.++|.|.+++|++.++...++.++++++.+... ...++++++++++++.|++|..++
T Consensus 461 d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~----~~~~~l~~~~~~~l~~~~~P~~v~ 536 (560)
T PRK08751 461 DMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPA----LTAEDVKAHARANLTGYKQPRIIE 536 (560)
T ss_pred hheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCC----CCHHHHHHHHHHhhhhccCCeEEE
Confidence 9999999999999999999999999999999988776666677777654322 123578899999999999999999
Q ss_pred EcCCcCCCCCCCcchhhhccc
Q 002615 322 FMDSLPMTSSGKVDYASLSAS 342 (900)
Q Consensus 322 ~v~~lP~t~~GKidr~~L~~~ 342 (900)
++++||+|++||++|++|++.
T Consensus 537 ~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 537 FRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred EhhhCCCCccccccHHHHHHh
Confidence 999999999999999999764
No 100
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-36 Score=351.88 Aligned_cols=300 Identities=21% Similarity=0.248 Sum_probs=252.7
Q ss_pred CcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCCC
Q 002615 10 EELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHVP 88 (900)
Q Consensus 10 ~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~ 88 (900)
.++++..+|++|.+++ ...+.++..|++.++.+. ..++..+++.++++++|.+.++|+++..+....... ...+
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~--~~~~ 326 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPN---PRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFD--KLDF 326 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecC---CcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcC--cCCc
Confidence 3567888999998876 457788889998777642 357888999999999999999999999988653321 2346
Q ss_pred CCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCC
Q 002615 89 SSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESD 168 (900)
Q Consensus 89 ~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 168 (900)
+++|.++.||+++++.+.+.|.+.+ ++++++.||+||++.+++..... ......++|+|++++.++++|++
T Consensus 327 ~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~--------~~~~~~~vG~p~~g~~v~i~d~~ 397 (557)
T PRK07059 327 SKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVD--------ATEFSGTIGLPLPSTEVSIRDDD 397 (557)
T ss_pred hhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCC--------CCCcCCcccCccCCcEEEEECCC
Confidence 7999999999999999999998877 78999999999998776543211 11134679999999999999876
Q ss_pred C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEE
Q 002615 169 T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIK 245 (900)
Q Consensus 169 ~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik 245 (900)
+ +.+..|||+++|+.++.||+++++.+...|. .++||+|||+++++++|.++++||+||+||
T Consensus 398 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~---------------~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~ 462 (557)
T PRK07059 398 GNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMT---------------ADGFFRTGDVGVMDERGYTKIVDRKKDMIL 462 (557)
T ss_pred CCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcc---------------cCCceecCcEEEEcCCCcEEEecccccceE
Confidence 5 3456799999999999999999988876663 267999999999999999999999999999
Q ss_pred ECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCC
Q 002615 246 INGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDS 325 (900)
Q Consensus 246 ~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~ 325 (900)
++|++|+|.+||++|.++|+|.+++|++.++...++.++++++...... ..+++++++++.|+.+++|..++++++
T Consensus 463 ~~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~----~~~~l~~~~~~~l~~~~~P~~i~~v~~ 538 (557)
T PRK07059 463 VSGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPAL----TEEDVKAFCKERLTNYKRPKFVEFRTE 538 (557)
T ss_pred ECCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCCC----CHHHHHHHHHHhcccccCCcEEEEecc
Confidence 9999999999999999999999999999888777778888888654321 235788999999999999999999999
Q ss_pred cCCCCCCCcchhhhccc
Q 002615 326 LPMTSSGKVDYASLSAS 342 (900)
Q Consensus 326 lP~t~~GKidr~~L~~~ 342 (900)
+|+|++||++|++|+++
T Consensus 539 ~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 539 LPKTNVGKILRRELRDG 555 (557)
T ss_pred CCCCcccceeHHHHHhh
Confidence 99999999999999753
No 101
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-36 Score=347.30 Aligned_cols=307 Identities=21% Similarity=0.260 Sum_probs=253.7
Q ss_pred CCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHH-HHHHHHhhccCCC
Q 002615 8 HGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMR-VVLPALQSQHNMH 86 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~-~l~~~~~~~~~~~ 86 (900)
.++++++..+|++|..++..++.+|+.|+++++.+.. ..++..+++.++++++|++.++|..+. .+..... .....
T Consensus 217 ~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~~~~~ 293 (533)
T PRK07798 217 GPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-ARGPY 293 (533)
T ss_pred CCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-ccccC
Confidence 6789999999999999999999999999999998633 568999999999999999999987664 3444333 11123
Q ss_pred CCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceee--eccCCcEEEE
Q 002615 87 VPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIG--LPISNCDIVL 164 (900)
Q Consensus 87 ~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~p~~~~~~~i 164 (900)
.++++|.+++||+++++++.+.+.+.+++..+++.||+||++..++.... . ...+.| ++.++..+++
T Consensus 294 ~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~----------~~~~~g~~~~~~~~~~~i 362 (533)
T PRK07798 294 DLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVA-K----------GAVHTGGPRFTIGPRTVV 362 (533)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCC-C----------CCccCCCCccCCCceEEE
Confidence 46899999999999999999999999988999999999998654442210 0 112233 7888999999
Q ss_pred ecCCCCC---CCc--cEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 165 VESDTVK---PDE--GEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 165 ~d~~~~~---~~~--GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+++++.+ +.. |+++ .++.++.||+++++.+...|... ++.+||+|||+++++++|.++++||
T Consensus 363 ~~~~~~~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~------------~~~~~~~TGD~~~~~~~g~l~~~GR 429 (533)
T PRK07798 363 LDEDGNPVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTI------------DGVRYAIPGDRARVEADGTITLLGR 429 (533)
T ss_pred ECCCCCCCCCCCCCeeEEE-eecCccccccCChhhhHHhhccC------------CCCceEEcCcEEEEcCCCcEEEEcc
Confidence 9877642 333 5665 45678999999999998887542 2468999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNR 319 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~ 319 (900)
.|++||++|++|+|.+||+++.++|.|.+++|++.++...+..+++++++++.... ..++|+++++++|+.|++|..
T Consensus 430 ~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~P~~ 506 (533)
T PRK07798 430 GSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARP---DLAELRAHCRSSLAGYKVPRA 506 (533)
T ss_pred ccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCC---CHHHHHHHHhhhcccCCCCeE
Confidence 99999999999999999999999999999999988776666778888887654322 246899999999999999999
Q ss_pred EEEcCCcCCCCCCCcchhhhccccc
Q 002615 320 FVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 320 ~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++++++||+|++||++|++|+++..
T Consensus 507 i~~~~~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 507 IWFVDEVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred EEEcccCCCCCcchhhHHHHhhhhc
Confidence 9999999999999999999998654
No 102
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-36 Score=358.98 Aligned_cols=321 Identities=18% Similarity=0.240 Sum_probs=246.1
Q ss_pred CCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhc----HHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 5 YPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKN----LISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~----~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.+++++|+++..+|++|.+++...+..+..|+++.+..+..+... +..++..++++++|++.++|.+++.+.....
T Consensus 287 ~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~ 366 (696)
T PLN02387 287 PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVR 366 (696)
T ss_pred CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHH
Confidence 357899999999999999998876677888998887643221111 2345668899999999999999999875432
Q ss_pred hccC---------------------------------------------CCCCCCcCEEEEeccCCChhhHHHHHhhCCC
Q 002615 81 SQHN---------------------------------------------MHVPSSLKLLVLSGEVLPLSMWDIISKLFPN 115 (900)
Q Consensus 81 ~~~~---------------------------------------------~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~ 115 (900)
.... ....++||.+++||+++++++.+.+...+ +
T Consensus 367 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g 445 (696)
T PLN02387 367 KKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-G 445 (696)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-C
Confidence 1100 00015899999999999999988777666 7
Q ss_pred ceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEec-CCC------CCCCccEEEEccccccccc
Q 002615 116 ISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVE-SDT------VKPDEGEIYAGGLCLSNGY 188 (900)
Q Consensus 116 ~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~------~~~~~GEl~v~g~~~~~gY 188 (900)
+.+++.||+||+++.++..... .....++|+|+++++++|+| +++ .+.+.|||+|+|++++.||
T Consensus 446 ~~v~~~YG~TEt~~~~~~~~~~---------~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY 516 (696)
T PLN02387 446 APIGQGYGLTETCAGATFSEWD---------DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGY 516 (696)
T ss_pred CCeeEeechhhcccceeecCcc---------cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchh
Confidence 8999999999998766543211 12346799999999999997 332 2345699999999999999
Q ss_pred cCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCee
Q 002615 189 FSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVV 267 (900)
Q Consensus 189 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~ 267 (900)
+++|+.|.+.|.... ++.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.+||++|.+||.|.
T Consensus 517 ~~~pe~T~~~f~~d~-----------~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~ 585 (696)
T PLN02387 517 FKNQEKTDEVYKVDE-----------RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVD 585 (696)
T ss_pred cCCHHHHhhhhcccc-----------CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCee
Confidence 999999999884311 13469999999999999999999999999998 699999999999999999999
Q ss_pred EEEEEEeecCCceEEEEEEEEecCCC------------C------chHHHHHHHHHHH-----HhhCCCCccCCEEEEcC
Q 002615 268 DTAVVSHKHQGELVILVAFIVLKEKK------------T------SSEIFLSSIKSWV-----SSKLPLAMIPNRFVFMD 324 (900)
Q Consensus 268 ~~~v~~~~~~~~~~~l~~~v~~~~~~------------~------~~~~~~~~l~~~l-----~~~l~~~~~P~~~~~v~ 324 (900)
+++|++.+.. ..++|+|++.... . ..+...+++.+.+ +.+|+.+.+|+.|.+++
T Consensus 586 ~~~V~g~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~ 662 (696)
T PLN02387 586 NIMVHADPFH---SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLP 662 (696)
T ss_pred EEEEEecCCc---ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEEC
Confidence 9999987633 2578888875321 0 0112223333333 34699999999999987
Q ss_pred CcC------CCCCCCcchhhhcccccccccc
Q 002615 325 SLP------MTSSGKVDYASLSASTSFTISA 349 (900)
Q Consensus 325 ~lP------~t~~GKidr~~L~~~~~~~~~~ 349 (900)
+-. +|++.|+.|+.+.+.|+..++.
T Consensus 663 ~~~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ 693 (696)
T PLN02387 663 EPWTPESGLVTAALKLKREQIRKKFKDDLKK 693 (696)
T ss_pred CCCCCCCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 633 6888899999999888766543
No 103
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-36 Score=349.68 Aligned_cols=312 Identities=21% Similarity=0.282 Sum_probs=254.5
Q ss_pred CCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
..+.++|+++..+|++|..++. .++.++..|+++++.+ ..++..++..++++++|.+.++|..+..+......
T Consensus 246 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~----~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~-- 319 (567)
T PRK06178 246 VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA----RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRF-- 319 (567)
T ss_pred ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC----CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCC--
Confidence 5678899999999999999974 5888999999999986 57899999999999999999999999888764321
Q ss_pred CCCCCCCcCEEEEe--ccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 84 NMHVPSSLKLLVLS--GEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 84 ~~~~~~~lr~v~~g--Ge~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
...+++++|.+..+ |+++++++.+.|.+.++...+.+.||+||++..++......... ......+.++|+|+++++
T Consensus 320 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~--~~~~~~~~~vG~p~~g~~ 397 (567)
T PRK06178 320 AEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD--FDLLSQPVFVGLPVPGTE 397 (567)
T ss_pred CCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCc--cccccCCcccccccCCcE
Confidence 12335678876544 59999999999998885444446899999986554322111000 001124567999999999
Q ss_pred EEEecCC-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEE
Q 002615 162 IVLVESD-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~ 237 (900)
++++|++ + +.++.|||+++|+.++.||+++++.+...| .++||+|||+++++++|.++|+
T Consensus 398 v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~----------------~dg~~~TGDl~~~~~~g~l~i~ 461 (567)
T PRK06178 398 FKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL----------------RDGWLHTGDIGKIDEQGFLHYL 461 (567)
T ss_pred EEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhcc----------------cCCceeecceEEEecCCeEEEE
Confidence 9999844 2 346679999999999999999998887665 2469999999999999999999
Q ss_pred cccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC
Q 002615 238 GRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP 317 (900)
Q Consensus 238 GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P 317 (900)
||+||+||++|++|+|.+||+++.+++.|.+++|++..+...++.+++++++++.... ..++|+++++++++.+++|
T Consensus 462 GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~~~p 538 (567)
T PRK06178 462 GRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADL---TAAALQAWCRENMAVYKVP 538 (567)
T ss_pred ecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcC---CHHHHHHHHHhcCcccCCc
Confidence 9999999999999999999999999999999999988776666778888887654332 2367999999999999999
Q ss_pred CEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 318 NRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 318 ~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
. +++++++|+|++||++|++|+++++
T Consensus 539 ~-i~~v~~iP~t~~GKv~r~~l~~~~~ 564 (567)
T PRK06178 539 E-IRIVDALPMTATGKVRKQDLQALAE 564 (567)
T ss_pred e-EEEeccCCCCCccceeHHHHHHHHH
Confidence 6 8889999999999999999987654
No 104
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=7.4e-37 Score=358.08 Aligned_cols=318 Identities=19% Similarity=0.267 Sum_probs=246.4
Q ss_pred cCCCC--CCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 4 LYPLH--GEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 4 ~~~~~--~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.+++. .+|++++++|++|.+++. .++.+|+.|+++++.+.......+..+++.++++++|+++++|++++.|++...
T Consensus 244 ~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~ 323 (614)
T PRK08180 244 TFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALE 323 (614)
T ss_pred hccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHH
Confidence 34543 568999999999998874 578899999999997421112345578889999999999999999999987543
Q ss_pred hcc--CCCCCCCcCEEEEeccCCChhhHHHHHhh----C-CCceEEeecCccccccccceecccCCccccccCCCCccee
Q 002615 81 SQH--NMHVPSSLKLLVLSGEVLPLSMWDIISKL----F-PNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPI 153 (900)
Q Consensus 81 ~~~--~~~~~~~lr~v~~gGe~l~~~~~~~~~~~----~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (900)
... ....+++||.+++||+++++++.+.+.+. + .++.+++.||+||++.+++..... .....++
T Consensus 324 ~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~sv 394 (614)
T PRK08180 324 RDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP---------LSRAGNI 394 (614)
T ss_pred hchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc---------cCCCCcc
Confidence 321 11236899999999999999999998874 2 247899999999998766543211 1145679
Q ss_pred eeccCCcEEEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEE----c
Q 002615 154 GLPISNCDIVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARR----I 229 (900)
Q Consensus 154 G~p~~~~~~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~----~ 229 (900)
|+|+++++++++++ +..|||+|+|+.++.||+++|+.+.+.|. .++||+|||+|++ +
T Consensus 395 G~p~pg~~v~i~d~----~~~GEi~vrg~~v~~GY~~~p~~t~~~~~---------------~dgw~~TGDlg~~~~~~d 455 (614)
T PRK08180 395 GLPAPGCEVKLVPV----GGKLEVRVKGPNVTPGYWRAPELTAEAFD---------------EEGYYRSGDAVRFVDPAD 455 (614)
T ss_pred cCccCCcEEEEecC----CCCcEEEEecCccchhhcCChhHhHhhcc---------------cCCceeccceEEecCCcC
Confidence 99999999999974 34599999999999999999999888773 2689999999999 4
Q ss_pred cCCcEEEEcccCCcEEE-CceeeC--hHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCC-----------c
Q 002615 230 QSGDLVFLGRKDRTIKI-NGQRMA--LEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKT-----------S 295 (900)
Q Consensus 230 ~~G~l~~~GR~dd~ik~-~G~rv~--~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~-----------~ 295 (900)
++|+|+|+||+||+||+ +|++|+ +.|||.++.+||.|.+++|++.+++ .+.|+|+++++.. .
T Consensus 456 ~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~ 531 (614)
T PRK08180 456 PERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASL 531 (614)
T ss_pred CCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCH
Confidence 68999999999999987 799877 7788899999999999999998765 4678887754310 0
Q ss_pred -hHHHHHHHHHHHHhhCCCCc--------cCCEEEEcCCcCCCCCC------CcchhhhccccccccccccCc
Q 002615 296 -SEIFLSSIKSWVSSKLPLAM--------IPNRFVFMDSLPMTSSG------KVDYASLSASTSFTISAQHDA 353 (900)
Q Consensus 296 -~~~~~~~l~~~l~~~l~~~~--------~P~~~~~v~~lP~t~~G------Kidr~~L~~~~~~~~~~~~~~ 353 (900)
.....++|++++++.|+.+. .|.++++++++|++++| |+.|+++.+.|+..++..|..
T Consensus 532 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~ 604 (614)
T PRK08180 532 AEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYAD 604 (614)
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCC
Confidence 00112456666666665555 89999999999987655 566778888887777766653
No 105
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-35 Score=345.57 Aligned_cols=316 Identities=19% Similarity=0.298 Sum_probs=248.7
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHH-HHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLS-AILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~-~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.+++.++|+++..+|++|..++...+. +++.|+++++. ..++..+++.++++++|++.++|++++.+.......
T Consensus 230 ~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~ 304 (567)
T PLN02479 230 IWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLR-----QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSE 304 (567)
T ss_pred hcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEecc-----CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhc
Confidence 467888999999999999988766443 45556555543 468999999999999999999999999988654322
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCC-cccc-ccCCCCcceeeeccCCc
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRL-PSIL-EMSTLKSVPIGLPISNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~-~~~~-~~~~~~~~~~G~p~~~~ 160 (900)
.. ..++++|.++++|+++++.+.+.|.+. +.++++.||+||+++.++....... .... ..........|.|.+++
T Consensus 305 ~~-~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~ 381 (567)
T PLN02479 305 TI-LPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGL 381 (567)
T ss_pred cc-ccccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCc
Confidence 11 236789999999999999999998775 6899999999998655443211100 0000 00001123467777777
Q ss_pred E-EEEecCC-CC---CC--CccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCc
Q 002615 161 D-IVLVESD-TV---KP--DEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGD 233 (900)
Q Consensus 161 ~-~~i~d~~-~~---~~--~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~ 233 (900)
. ++++|++ .. .+ +.|||+++|+.++.||+++|+.+.+.|. ++||+|||+++++++|+
T Consensus 382 ~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~----------------~g~~~TGDl~~~~~~g~ 445 (567)
T PLN02479 382 EGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFA----------------NGWFHSGDLGVKHPDGY 445 (567)
T ss_pred CceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhc----------------CCceecceeEEEcCCcc
Confidence 5 7787743 21 22 4699999999999999999999998872 47999999999999999
Q ss_pred EEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc--hHHHHHHHHHHHHhhC
Q 002615 234 LVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS--SEIFLSSIKSWVSSKL 311 (900)
Q Consensus 234 l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~--~~~~~~~l~~~l~~~l 311 (900)
++|+||.||+||++|+||+|.|||.+|.+||.|.+++|++..+...++.+++++++...... .+...++|+++++++|
T Consensus 446 l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l 525 (567)
T PLN02479 446 IEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERL 525 (567)
T ss_pred EEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999998776666778888887654321 1344578999999999
Q ss_pred CCCccCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 312 PLAMIPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 312 ~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
|.|++|..+++ ++||+|++||++|++|++.+.
T Consensus 526 ~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~ 557 (567)
T PLN02479 526 PAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAK 557 (567)
T ss_pred ccccCCceEEe-ccCCCCCccCeeHHHHHHHHH
Confidence 99999998876 679999999999999986543
No 106
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-35 Score=346.14 Aligned_cols=302 Identities=24% Similarity=0.275 Sum_probs=252.7
Q ss_pred CCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCC
Q 002615 8 HGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMH 86 (900)
Q Consensus 8 ~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~ 86 (900)
..+++++..+|++|.+++ ...+.++..|+++++... ..++..+++.++++++|++.++|++++.+....... ..
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~~ 322 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITN---PRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQ--EL 322 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecC---ccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcc--cC
Confidence 346788899999998876 446778889998877632 357788999999999999999999999988643221 23
Q ss_pred CCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEec
Q 002615 87 VPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVE 166 (900)
Q Consensus 87 ~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d 166 (900)
.+++||.+++||+++++.+.+.|.+.+ ++.+++.||+||++..++...... .....++|.|++++.+++++
T Consensus 323 ~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~~ 393 (560)
T PRK08974 323 DFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDL--------DYYSGSIGLPVPSTEIKLVD 393 (560)
T ss_pred CccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCC--------cccCCccccCcCCCEEEEEC
Confidence 367999999999999999999998876 789999999999987666432211 11345799999999999998
Q ss_pred CCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCc
Q 002615 167 SDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRT 243 (900)
Q Consensus 167 ~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ 243 (900)
+++ +.++.|||+++|+.++.||+++++.+...| .++||+|||+++++++|.++++||+||+
T Consensus 394 ~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~----------------~~g~~~TGDl~~~~~~g~l~i~GR~~d~ 457 (560)
T PRK08974 394 DDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVI----------------KDGWLATGDIAVMDEEGFLRIVDRKKDM 457 (560)
T ss_pred CCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhh----------------hcCCcccCCEEEEcCCceEEEEecccce
Confidence 765 345679999999999999999998887766 2579999999999999999999999999
Q ss_pred EEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEc
Q 002615 244 IKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFM 323 (900)
Q Consensus 244 ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v 323 (900)
|+++|.+|+|.+||++|.+||.|.+++|++.++...+..++++++..+... ..+++++++.++|+.+++|..++++
T Consensus 458 i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~----~~~~l~~~l~~~l~~~~~P~~~~~~ 533 (560)
T PRK08974 458 ILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPSL----TEEELITHCRRHLTGYKVPKLVEFR 533 (560)
T ss_pred EEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCCC----CHHHHHHHHHhhcccccCCcEEEEh
Confidence 999999999999999999999999999999888777777777776543221 2357889999999999999999999
Q ss_pred CCcCCCCCCCcchhhhcccc
Q 002615 324 DSLPMTSSGKVDYASLSAST 343 (900)
Q Consensus 324 ~~lP~t~~GKidr~~L~~~~ 343 (900)
++||+|++||++|++|++..
T Consensus 534 ~~lP~t~~GK~~r~~l~~~~ 553 (560)
T PRK08974 534 DELPKSNVGKILRRELRDEA 553 (560)
T ss_pred hhCCCCCCCcEeHHHHHHHH
Confidence 99999999999999998644
No 107
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-35 Score=330.40 Aligned_cols=273 Identities=18% Similarity=0.243 Sum_probs=232.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHHH-HHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQ-EFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
+.+++.++|+++..+|++|.+++. .++.+|..|+++++.+ ..++..+++.++++++|++.++|+++..+.+....
T Consensus 135 ~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~ 210 (414)
T PRK08308 135 EALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT----NKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG 210 (414)
T ss_pred HhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC----CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc
Confidence 356788899999999999999874 5899999999999986 56889999999999999999999999998765321
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
..+++.+++||+++++++.+.+.+. ..+++|.||+||+++++.... .....++|+|+++++
T Consensus 211 ------~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~-----------~~~~~~~G~p~~~~~ 271 (414)
T PRK08308 211 ------TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICPD-----------MKSHLDLGNPLPHVS 271 (414)
T ss_pred ------cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecCC-----------CCCCCccCccCCCeE
Confidence 2378999999999999999999886 468999999999986443211 113457899999999
Q ss_pred EEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccC
Q 002615 162 IVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKD 241 (900)
Q Consensus 162 ~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~d 241 (900)
+++.+. .+..|||++++. ++||+|||++++++||+++|+||.|
T Consensus 272 ~~~~~~---~~~~gel~v~~~----------------------------------~~~~~TGDl~~~~~dg~l~~~GR~~ 314 (414)
T PRK08308 272 VSAGSD---ENAPEEIVVKMG----------------------------------DKEIFTKDLGYKSERGTLHFMGRMD 314 (414)
T ss_pred EEEecC---CCCCceEEEEcC----------------------------------CceEECCceEEECCCccEEEecccC
Confidence 998743 346699988631 4689999999999999999999999
Q ss_pred CcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEE
Q 002615 242 RTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFV 321 (900)
Q Consensus 242 d~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~ 321 (900)
|+||++|+||+|.|||+++.++|+|.+++|++.+++..++.++++++.+... ..++++++++++||.|++|..++
T Consensus 315 ~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~-----~~~~l~~~l~~~l~~~~~P~~i~ 389 (414)
T PRK08308 315 DVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI-----DPVQLREWCIQHLAPYQVPHEIE 389 (414)
T ss_pred CeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC-----CHHHHHHHHHHhCccccCCcEEE
Confidence 9999999999999999999999999999999988877777788888765421 23578999999999999999999
Q ss_pred EcCCcCCCCCCCcchhhhc
Q 002615 322 FMDSLPMTSSGKVDYASLS 340 (900)
Q Consensus 322 ~v~~lP~t~~GKidr~~L~ 340 (900)
++++||+|++||++|+.|.
T Consensus 390 ~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 390 SVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred EeccCCCCCCcCeehhhhh
Confidence 9999999999999999553
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-35 Score=346.83 Aligned_cols=322 Identities=15% Similarity=0.153 Sum_probs=249.5
Q ss_pred cCCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.+++.++|+++.++|++|+.++.. ++.++..|+++++.+......+|..+++.+.+++++++..+|.++..+.......
T Consensus 212 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~ 291 (579)
T PRK09192 212 GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK 291 (579)
T ss_pred cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc
Confidence 678999999999999999999876 6677899999988754444457899999999999998877666666554332211
Q ss_pred -cCCCCCCCcCEEEEeccCCChhhHHHHHhhCC-----CceEEeecCccccccccceecccCCcccc-------------
Q 002615 83 -HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFP-----NISILNLYGSTEVSGDCTYFDCKRLPSIL------------- 143 (900)
Q Consensus 83 -~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~-----~~~l~~~YG~TE~~~~~~~~~~~~~~~~~------------- 143 (900)
....+++++|.+++||+++++.+++.+.+.++ ...+++.||+||++..++...........
T Consensus 292 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (579)
T PRK09192 292 DLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKA 371 (579)
T ss_pred cccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCcee
Confidence 11234689999999999999999999988763 13599999999998766543221100000
Q ss_pred ------ccCCCCcceeeeccCCcEEEEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCC
Q 002615 144 ------EMSTLKSVPIGLPISNCDIVLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSC 214 (900)
Q Consensus 144 ------~~~~~~~~~~G~p~~~~~~~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~ 214 (900)
........++|+|++++.++|+|+++. .++.|||+++|+.+++||+++ +.+.+.|.
T Consensus 372 ~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~-------------- 436 (579)
T PRK09192 372 VAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLA-------------- 436 (579)
T ss_pred eccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecCCchhhhhcCC-cccccccc--------------
Confidence 000001247899999999999987653 456799999999999999999 55555442
Q ss_pred CCcceEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCee--EEEEEEeecCCceEEEEEEEEecCC
Q 002615 215 GSQTYFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVV--DTAVVSHKHQGELVILVAFIVLKEK 292 (900)
Q Consensus 215 ~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~--~~~v~~~~~~~~~~~l~~~v~~~~~ 292 (900)
.++||+|||+|++ ++|+++|+||+||+||++|++|+|.|||++|++||.|. +++|++..++.. ..++++++....
T Consensus 437 -~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~-~~~~~~v~~~~~ 513 (579)
T PRK09192 437 -ADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENG-EKIVLLVQCRIS 513 (579)
T ss_pred -CCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCCC-eeEEEEEEecCC
Confidence 3679999999998 99999999999999999999999999999999999998 888888777653 467777776543
Q ss_pred CCchHHHHHHHHHHHHhhCC-CCccCCEEEEcC--CcCCCCCCCcchhhhccccccc
Q 002615 293 KTSSEIFLSSIKSWVSSKLP-LAMIPNRFVFMD--SLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 293 ~~~~~~~~~~l~~~l~~~l~-~~~~P~~~~~v~--~lP~t~~GKidr~~L~~~~~~~ 346 (900)
.. ...++|++++++.++ .+++|..++++. +||+|++||++|++|++.+...
T Consensus 514 ~~---~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 514 DE---ERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred Ch---HHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcC
Confidence 22 234577888888764 578898888885 8999999999999999877654
No 109
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=9.7e-36 Score=348.94 Aligned_cols=313 Identities=21% Similarity=0.237 Sum_probs=243.5
Q ss_pred CCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC-
Q 002615 6 PLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN- 84 (900)
Q Consensus 6 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~- 84 (900)
+++++|++++.+|++|.++....+.++..|+++++.. .++..+++.|+++++|++.++|.+++.+.........
T Consensus 262 ~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~-----~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~ 336 (660)
T PLN02430 262 KMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYH-----GDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQE 336 (660)
T ss_pred CCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeC-----CChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhc
Confidence 5788999999999999998876667789999998874 3677899999999999999999999887653211000
Q ss_pred ----------------------------CC--------------CCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeec
Q 002615 85 ----------------------------MH--------------VPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLY 122 (900)
Q Consensus 85 ----------------------------~~--------------~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~Y 122 (900)
.. ..++||.+++||+++++++.+.+ +.++++.+++.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~~~~i~~~Y 415 (660)
T PLN02430 337 LNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTSCAFVVQGY 415 (660)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhcCCCeeeec
Confidence 00 01589999999999999986655 445457899999
Q ss_pred CccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCC--C----CCCCccEEEEccccccccccCCCCCCc
Q 002615 123 GSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESD--T----VKPDEGEIYAGGLCLSNGYFSESTFMP 196 (900)
Q Consensus 123 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~--~----~~~~~GEl~v~g~~~~~gY~~~~~~~~ 196 (900)
|+||+++.++..... ......++|+|++++++++.|.+ + ..+..|||+|+|++++.||+++|+.|.
T Consensus 416 G~TE~~~~~~~~~~~--------~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~ 487 (660)
T PLN02430 416 GLTETLGPTTLGFPD--------EMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTE 487 (660)
T ss_pred chhhhhhceEeeccc--------cCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhh
Confidence 999998765543211 11135679999999999997621 1 233469999999999999999999998
Q ss_pred cchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEee
Q 002615 197 SEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHK 275 (900)
Q Consensus 197 ~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~ 275 (900)
+.| .++||+|||+|++++||+|+|+||+||+||+ +|++|+|.+||+++.+||.|.+++|++..
T Consensus 488 ~~~----------------~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~ 551 (660)
T PLN02430 488 EVM----------------KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS 551 (660)
T ss_pred hhh----------------hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC
Confidence 877 2689999999999999999999999999998 79999999999999999999999999843
Q ss_pred cCCceEEEEEEEEecCCCC-----------------chHHHH----HHHHHHH-HhhCCCCccCCEEEEcCC-c-----C
Q 002615 276 HQGELVILVAFIVLKEKKT-----------------SSEIFL----SSIKSWV-SSKLPLAMIPNRFVFMDS-L-----P 327 (900)
Q Consensus 276 ~~~~~~~l~~~v~~~~~~~-----------------~~~~~~----~~l~~~l-~~~l~~~~~P~~~~~v~~-l-----P 327 (900)
....++|+|+++.... ..+.+. +++.+.. +..|+.|.++..|+++++ | .
T Consensus 552 ---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~ 628 (660)
T PLN02430 552 ---FKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDL 628 (660)
T ss_pred ---CcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCc
Confidence 2347889998764210 011122 2333333 235999999999998764 3 5
Q ss_pred CCCCCCcchhhhcccccccccccc
Q 002615 328 MTSSGKVDYASLSASTSFTISAQH 351 (900)
Q Consensus 328 ~t~~GKidr~~L~~~~~~~~~~~~ 351 (900)
+|+++|+.|+.+.+.|+..++..|
T Consensus 629 lT~t~K~~R~~i~~~y~~~i~~ly 652 (660)
T PLN02430 629 VTATLKKRRNNLLKYYQVEIDEMY 652 (660)
T ss_pred CChhhhhhhHHHHHHHHHHHHHHH
Confidence 899999999999988876665444
No 110
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-36 Score=354.99 Aligned_cols=316 Identities=16% Similarity=0.194 Sum_probs=235.2
Q ss_pred CCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC--
Q 002615 7 LHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN-- 84 (900)
Q Consensus 7 ~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~-- 84 (900)
++++|++++.+|++|.++.......+..|+++++.++.............++++++|++.++|.+++.+.........
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~ 386 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGSPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPV 386 (700)
T ss_pred CCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECCHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhcc
Confidence 478999999999999988766566678888877643211111111111267899999999999999987653221100
Q ss_pred -------------------------------------CCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCcccc
Q 002615 85 -------------------------------------MHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEV 127 (900)
Q Consensus 85 -------------------------------------~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~ 127 (900)
....++||.+++||+++++++.+.++..+ + .++|.||+||+
T Consensus 387 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TEt 464 (700)
T PTZ00216 387 GSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTET 464 (700)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccCcccc
Confidence 00015899999999999999988777666 5 89999999999
Q ss_pred ccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCC-----CCCCccEEEEccccccccccCCCCCCccchhcc
Q 002615 128 SGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDT-----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKL 202 (900)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~-----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~ 202 (900)
++.++.... ......++|+|+++++++|+|.++ .+++.|||+|+|++++.||+++|+.|++.|..
T Consensus 465 ~~~~~~~~~---------~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~- 534 (700)
T PTZ00216 465 VCCGGIQRT---------GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDE- 534 (700)
T ss_pred cccccccCC---------CCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccc-
Confidence 866553221 112457899999999999998653 33457999999999999999999999998843
Q ss_pred CCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEE-ECceeeChHHHHHHHhCCCCeeEE--EEEEeecCCc
Q 002615 203 HNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIK-INGQRMALEEIEHTLRGHPDVVDT--AVVSHKHQGE 279 (900)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik-~~G~rv~~~~iE~~l~~~~~v~~~--~v~~~~~~~~ 279 (900)
++||+|||+|++++||.|+|+||+||+|| .+|++|+|.+||+++.+||.|.++ +|+..++.
T Consensus 535 --------------dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~-- 598 (700)
T PTZ00216 535 --------------DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPAR-- 598 (700)
T ss_pred --------------cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCC--
Confidence 57999999999999999999999999999 699999999999999999999973 44443322
Q ss_pred eEEEEEEEEecCCC-----------C------chHHHHHHHHH----HH-HhhCCCCccCCEEEEcCC------cCCCCC
Q 002615 280 LVILVAFIVLKEKK-----------T------SSEIFLSSIKS----WV-SSKLPLAMIPNRFVFMDS------LPMTSS 331 (900)
Q Consensus 280 ~~~l~~~v~~~~~~-----------~------~~~~~~~~l~~----~l-~~~l~~~~~P~~~~~v~~------lP~t~~ 331 (900)
..++|++++.... . ..+...+.+.+ .. +..|..|..++.|.++.+ =.+|++
T Consensus 599 -~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t 677 (700)
T PTZ00216 599 -SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAA 677 (700)
T ss_pred -ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChh
Confidence 3678888875311 0 01112222333 22 246888999999988754 347999
Q ss_pred CCcchhhhcccccccccccc
Q 002615 332 GKVDYASLSASTSFTISAQH 351 (900)
Q Consensus 332 GKidr~~L~~~~~~~~~~~~ 351 (900)
+|+.|+++.+.|+..++..|
T Consensus 678 ~K~~R~~i~~~y~~~i~~ly 697 (700)
T PTZ00216 678 MKLKRRVIDERYADLIKELF 697 (700)
T ss_pred hccchHHHHHHHHHHHHHHh
Confidence 99999999988877665544
No 111
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-34 Score=332.15 Aligned_cols=313 Identities=19% Similarity=0.246 Sum_probs=243.0
Q ss_pred cCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 4 LYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++..+|++++.+|++|..++...+...+.|++.++.. ..++..+++.|+++++|++.++|++++.|+.......
T Consensus 217 ~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~ 292 (545)
T PRK08162 217 AWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGTNVCLR----KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWR 292 (545)
T ss_pred hcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccEEEEeC----CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccc
Confidence 356778899999999999998866444445566665554 4789999999999999999999999999986533221
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccC-Cccccc-cCCCCcceeeeccC-Cc
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKR-LPSILE-MSTLKSVPIGLPIS-NC 160 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~~-~~~~~~~~~G~p~~-~~ 160 (900)
..+.+++.++++|+++++.+.+.+.+. ++++++.||+||+++.++...... ...... .......+.|.+++ ..
T Consensus 293 --~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 368 (545)
T PRK08162 293 --AGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQE 368 (545)
T ss_pred --cCCccceEEEECCCCCCHHHHHHHHHh--CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcc
Confidence 123456778899999999999988764 789999999999865444321110 000000 00011234565554 33
Q ss_pred EEEEecCCC-C---C-C-CccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcE
Q 002615 161 DIVLVESDT-V---K-P-DEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDL 234 (900)
Q Consensus 161 ~~~i~d~~~-~---~-~-~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l 234 (900)
.++++|++. . . + ..|||+++|+.++.||+++++.+...|. ++||+|||+++++++|.+
T Consensus 369 ~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~----------------~g~~~TGDl~~~d~dg~l 432 (545)
T PRK08162 369 GVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFA----------------GGWFHTGDLAVLHPDGYI 432 (545)
T ss_pred eEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHhh----------------CCCcccCceEEEcCCccE
Confidence 567777532 2 1 2 2599999999999999999999988772 479999999999999999
Q ss_pred EEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCC
Q 002615 235 VFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLA 314 (900)
Q Consensus 235 ~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~ 314 (900)
+|+||.||+||++|+||+|.+||+.|.+||.|.+++|++.++...++.+++++++++.... ..+++++++++.||.|
T Consensus 433 ~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~~~l~~~ 509 (545)
T PRK08162 433 KIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASA---TEEEIIAHCREHLAGF 509 (545)
T ss_pred EEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCC---CHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999998877666778888887765432 2468999999999999
Q ss_pred ccCCEEEEcCCcCCCCCCCcchhhhccccc
Q 002615 315 MIPNRFVFMDSLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 315 ~~P~~~~~v~~lP~t~~GKidr~~L~~~~~ 344 (900)
++|..+++ .++|+|++||++|+.|++.+.
T Consensus 510 ~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~ 538 (545)
T PRK08162 510 KVPKAVVF-GELPKTSTGKIQKFVLREQAK 538 (545)
T ss_pred cCCcEEEe-cccCCCCCcCCcHHHHHHHHh
Confidence 99999875 679999999999999987544
No 112
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-35 Score=346.26 Aligned_cols=313 Identities=17% Similarity=0.204 Sum_probs=235.4
Q ss_pred CcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc--CCC
Q 002615 10 EELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH--NMH 86 (900)
Q Consensus 10 ~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~--~~~ 86 (900)
.|+++.++|++|.+++.. ++.+|..|+++++.+..........+++.++++++|++.++|++++.|++...... ...
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 589999999999998755 67889999999997521112233456777899999999999999998876543221 112
Q ss_pred CCCCcCEEEEeccCCChhhHHHHHhhC-----CCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 87 VPSSLKLLVLSGEVLPLSMWDIISKLF-----PNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 87 ~~~~lr~v~~gGe~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
.+++||.+++||+++++++.+.+.+.+ +++.+++.||+||++.+++..... .....++|+|+++++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~svG~p~pg~~ 414 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD---------TERVGLIGLPLPGVE 414 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC---------CCCCCCCCcCCCCcE
Confidence 357899999999999999999998863 246899999999998654421110 123457899999999
Q ss_pred EEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEE-c---cCCcEEEE
Q 002615 162 IVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARR-I---QSGDLVFL 237 (900)
Q Consensus 162 ~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~-~---~~G~l~~~ 237 (900)
+++++ .++.|||+|+|++++.||+++|+.+.+.|. .++||+|||+|++ + ++|+|+|+
T Consensus 415 v~i~~----~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~---------------~dgw~~TGDlg~~~d~~~~~g~l~i~ 475 (624)
T PRK12582 415 LKLAP----VGDKYEVRVKGPNVTPGYHKDPELTAAAFD---------------EEGFYRLGDAARFVDPDDPEKGLIFD 475 (624)
T ss_pred EEEcc----CCCceEEEEECCcccccccCCccchhhhcC---------------ccCCccccceEEecCCcCCCCceEEe
Confidence 99973 356799999999999999999999988773 2689999999998 4 46999999
Q ss_pred cccCCcEEE-CceeeChHHHH--HHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCC---------C------chHHH
Q 002615 238 GRKDRTIKI-NGQRMALEEIE--HTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKK---------T------SSEIF 299 (900)
Q Consensus 238 GR~dd~ik~-~G~rv~~~~iE--~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~---------~------~~~~~ 299 (900)
||+||+||+ +|++|+|.+|| .++.+||.|.+|+|++.+++. +.+.|++.... . ..+.+
T Consensus 476 GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l 551 (624)
T PRK12582 476 GRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAF----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAV 551 (624)
T ss_pred ccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCc----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHH
Confidence 999999997 79999999885 688899999999999987653 33444332110 0 11112
Q ss_pred HHHHHHH---HHhhCCCCc-cCCEEEEcCCcCC------CCCCCcchhhhccccccccccccCcc
Q 002615 300 LSSIKSW---VSSKLPLAM-IPNRFVFMDSLPM------TSSGKVDYASLSASTSFTISAQHDAD 354 (900)
Q Consensus 300 ~~~l~~~---l~~~l~~~~-~P~~~~~v~~lP~------t~~GKidr~~L~~~~~~~~~~~~~~~ 354 (900)
.+.++.. .++.+|.+. .|.++++++++|+ |++||+.|++..+.|+.+++..|...
T Consensus 552 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~~~ 616 (624)
T PRK12582 552 LAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYAEP 616 (624)
T ss_pred HHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhcCC
Confidence 2222222 233456665 9999999998765 56777778888888888887777654
No 113
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-34 Score=337.93 Aligned_cols=330 Identities=18% Similarity=0.217 Sum_probs=237.9
Q ss_pred CCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHH-HHHHHHHHhh-cc
Q 002615 7 LHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSL-MRVVLPALQS-QH 83 (900)
Q Consensus 7 ~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~-l~~l~~~~~~-~~ 83 (900)
..++|++++++|++|+.++.. ++.+++.|+++++.++.....+|..+++.+++++++++ .+|++ +..+...... ..
T Consensus 204 ~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~ 282 (578)
T PRK05850 204 PPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDM 282 (578)
T ss_pred CCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhh
Confidence 356889999999999999754 89999999999998654444589999999999999866 45554 4433332211 11
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhC-----CCceEEeecCccccccccceecccCCcccc-----c--c------
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLF-----PNISILNLYGSTEVSGDCTYFDCKRLPSIL-----E--M------ 145 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~-----~--~------ 145 (900)
...+++++|.++.||+++++.+.++|.+.| ++..+++.||+||++..+........+... . .
T Consensus 283 ~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 362 (578)
T PRK05850 283 AGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRC 362 (578)
T ss_pred cCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEec
Confidence 123467899999999999999999998876 335799999999987654432211100000 0 0
Q ss_pred ---CCCCcceeeeccCCcEEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcc
Q 002615 146 ---STLKSVPIGLPISNCDIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQT 218 (900)
Q Consensus 146 ---~~~~~~~~G~p~~~~~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 218 (900)
......++|.|. +.+++++|++. +.++.|||+|+|+.++.||+++|+.+.+.|.....++. .....++
T Consensus 363 ~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~----~~~~~~~ 437 (578)
T PRK05850 363 ETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPS----PGTPEGP 437 (578)
T ss_pred CCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhccccccc----ccCCCCC
Confidence 011123456664 57899987543 34667999999999999999999999998853221100 0011257
Q ss_pred eEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHH
Q 002615 219 YFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEI 298 (900)
Q Consensus 219 ~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~ 298 (900)
||+|||+|+++ +|+++|+||+||+||++|++|+|.|||++|.+||.+. ++|++.++. .++.++++++++......+.
T Consensus 438 w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~~-~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~ 514 (578)
T PRK05850 438 WLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGGR-VAAISVPDD-GTEKLVAIIELKKRGDSDEE 514 (578)
T ss_pred eeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCCc-EEEEEecCC-CceEEEEEEEeccccCcchh
Confidence 99999999987 8999999999999999999999999999999999854 677777765 55678899988765432211
Q ss_pred ---HHHHHHHHHHhhCCC--CccCCEEEEcC--CcCCCCCCCcchhhhcccccc
Q 002615 299 ---FLSSIKSWVSSKLPL--AMIPNRFVFMD--SLPMTSSGKVDYASLSASTSF 345 (900)
Q Consensus 299 ---~~~~l~~~l~~~l~~--~~~P~~~~~v~--~lP~t~~GKidr~~L~~~~~~ 345 (900)
....+++.+...++. ...|..+++++ +||+|++|||+|++|++.+..
T Consensus 515 ~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 515 AMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQ 568 (578)
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHc
Confidence 234556665554442 23566666664 799999999999999886643
No 114
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=7.8e-35 Score=321.61 Aligned_cols=304 Identities=22% Similarity=0.306 Sum_probs=236.9
Q ss_pred ccCC-CCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 3 DLYP-LHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 3 ~~~~-~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
+.++ ++++|+.++.+|++|.+.... ....+..|++.+.. .++..+++.++..++|++.+||.+++.+-....
T Consensus 225 ~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~------~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~ 298 (613)
T COG1022 225 EVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK------EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIM 298 (613)
T ss_pred hhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec------CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHH
Confidence 4455 889999999999999998865 66667777766665 488999999999999999999999988754322
Q ss_pred hccC----------------------------------------------CCCCCCcCEEEEeccCCChhhHHHHHhhCC
Q 002615 81 SQHN----------------------------------------------MHVPSSLKLLVLSGEVLPLSMWDIISKLFP 114 (900)
Q Consensus 81 ~~~~----------------------------------------------~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~ 114 (900)
+... ...-.++|++++||+++++++...++..
T Consensus 299 ~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-- 376 (613)
T COG1022 299 EKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-- 376 (613)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--
Confidence 1100 0011489999999999999999988887
Q ss_pred CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCCCCCCccEEEEccccccccccCCCCC
Q 002615 115 NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDTVKPDEGEIYAGGLCLSNGYFSESTF 194 (900)
Q Consensus 115 ~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~ 194 (900)
++++.++||+|||++.++..+..+ ....++|+|+|+++++|.|+ |||+|+||.||+|||++|+.
T Consensus 377 Gi~i~eGYGlTEts~~~~v~~~~~---------~~~gtvG~p~p~~evKI~d~-------GEilVRG~~Vm~GYyk~pe~ 440 (613)
T COG1022 377 GIPILEGYGLTETSAVVSVNPPDR---------FVLGTVGKPLPGIEVKIADD-------GEILVRGPNVMKGYYKNPEA 440 (613)
T ss_pred CCCeEEEecccccccceEEccccC---------cccCCcCCcCCCceEEEccC-------ceEEEecchhcchhcCChHH
Confidence 799999999999999888765432 25678899999999999974 99999999999999999999
Q ss_pred CccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEE
Q 002615 195 MPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVS 273 (900)
Q Consensus 195 ~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~ 273 (900)
|++.|.. ++||+|||+|.++++|+|+++||+++.||. +|++|.|+.||..+.++|-|.+++|++
T Consensus 441 Taeaf~~---------------DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg 505 (613)
T COG1022 441 TAEAFTE---------------DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG 505 (613)
T ss_pred Hhhhccc---------------cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe
Confidence 9999954 899999999999999999999999999999 999999999999999999999999999
Q ss_pred eecCCceEEEEEEEEecCCCCc-------------hH------HHHHHHHHHH---HhhCCCCccCCEEEEcC-CcC---
Q 002615 274 HKHQGELVILVAFIVLKEKKTS-------------SE------IFLSSIKSWV---SSKLPLAMIPNRFVFMD-SLP--- 327 (900)
Q Consensus 274 ~~~~~~~~~l~~~v~~~~~~~~-------------~~------~~~~~l~~~l---~~~l~~~~~P~~~~~v~-~lP--- 327 (900)
..+. .+.|.|++..+... .+ .+...+...+ ...+..+.....++... ++.
T Consensus 506 ~~k~----~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~ 581 (613)
T COG1022 506 DDKK----FLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPEN 581 (613)
T ss_pred cCCc----ceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeeccccccccc
Confidence 3333 67888887543211 00 0111111111 11234445555555543 233
Q ss_pred --CCCCCCcchhhhcccccccccc
Q 002615 328 --MTSSGKVDYASLSASTSFTISA 349 (900)
Q Consensus 328 --~t~~GKidr~~L~~~~~~~~~~ 349 (900)
+|+.-|+.|..+.+.+...+..
T Consensus 582 ~~~t~t~klkR~~i~~~~~~~i~~ 605 (613)
T COG1022 582 GELTPTLKLKRHVILDRYKDEIEA 605 (613)
T ss_pred CccccchhhhHHHHHHhhhhHHHH
Confidence 6888899998887777655443
No 115
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=100.00 E-value=1e-32 Score=302.89 Aligned_cols=316 Identities=22% Similarity=0.401 Sum_probs=259.0
Q ss_pred ccccccccccccccc-----ccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEe
Q 002615 532 FIQELWKVHMESCVD-----ASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGC 606 (900)
Q Consensus 532 ~~~~~W~~~~~~~v~-----~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~ 606 (900)
..+++|+++++.++. ++|++ .++.+|+++.+|.|+++|..||+++|++.++..+..++.+ +++.+|+++
T Consensus 39 ~~~~~W~~~~~~~~~~~~~~~~p~v----~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~ 112 (377)
T TIGR03300 39 KVDQVWSASVGDGVGHYYLRLQPAV----AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGT 112 (377)
T ss_pred cceeeeEEEcCCCcCccccccceEE----ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEc
Confidence 456889999999875 67887 5889999999999999999999999999988876555544 456899999
Q ss_pred eCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCcc-----ccCceeec
Q 002615 607 YKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSI-----FGSPAIDE 681 (900)
Q Consensus 607 ~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~-----~~~~~~~~ 681 (900)
.+|.||+||..+|+++|+....+.+.+.|++.+ +.+++++.++.|+++|.++|+.+|++...... .++|++.+
T Consensus 113 ~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~--~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~ 190 (377)
T TIGR03300 113 EKGEVIALDAEDGKELWRAKLSSEVLSPPLVAN--GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIAD 190 (377)
T ss_pred CCCEEEEEECCCCcEeeeeccCceeecCCEEEC--CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEEC
Confidence 999999999999999999998888888888754 68999999999999999999999998775432 35677765
Q ss_pred cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcce---------eeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEee
Q 002615 682 VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAF---------ASLCITSANRHVICCLVDGHVVALD-SSGSIIWR 751 (900)
Q Consensus 682 ~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~---------~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~ 751 (900)
+.+|+++.+|.++++|+++ |+.+|+.....+.. ....+...++.+|+++.+|.++++| .+|+++|+
T Consensus 191 --~~v~~~~~~g~v~ald~~t--G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~ 266 (377)
T TIGR03300 191 --GGVLVGFAGGKLVALDLQT--GQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWK 266 (377)
T ss_pred --CEEEEECCCCEEEEEEccC--CCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEe
Confidence 7899999999999999988 99999876532210 0112223578999999999999999 89999998
Q ss_pred ecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEE-ecCCceecccccccccccccccccCCCeEEEEEcC
Q 002615 752 CRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEY-SVGDPITASAYIDEHLQLKLESCLSIDRLVCICTS 830 (900)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 830 (900)
.+... ...| ...++.+|+++.+|.++++|..+|+.+|++ .......++|.+ .++.+++++.
T Consensus 267 ~~~~~--~~~p---~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i-------------~g~~l~~~~~ 328 (377)
T TIGR03300 267 RDASS--YQGP---AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV-------------VGGYLVVGDF 328 (377)
T ss_pred eccCC--ccCc---eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE-------------ECCEEEEEeC
Confidence 87432 2333 345789999999999999999999999987 444444444433 2789999999
Q ss_pred CCcEEEEEeecCcccccccccccceeeeeeeccCC-ccccCceeeCCEEEEeeeCCeEEEE
Q 002615 831 SGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQG-DIFSSPVMIGGRVFVGCRDDYIYCI 890 (900)
Q Consensus 831 ~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ss~~~~~~~l~vg~~dg~l~~l 890 (900)
+|.|+++|.++| ++.+++++++ .+.++|++.+++||+++.||.||||
T Consensus 329 ~G~l~~~d~~tG-------------~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 329 EGYLHWLSREDG-------------SFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEEEEECCCC-------------CEEEEEEcCCCccccCCEEECCEEEEEeCCceEEEe
Confidence 999999999877 6777888777 5788999999999999999999997
No 116
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-33 Score=328.22 Aligned_cols=323 Identities=16% Similarity=0.224 Sum_probs=243.3
Q ss_pred cCCCCCC-cEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 4 LYPLHGE-ELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 4 ~~~~~~~-d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
.+++.++ |++++.+|++|+.++.. ++.++..|+++++.++.....+|..+.+.+++++++++..+|.++..+.....+
T Consensus 187 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 266 (545)
T PRK07768 187 AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRR 266 (545)
T ss_pred hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhc
Confidence 4567776 89999999999999876 667899999999886555556888999999999999998888888777654422
Q ss_pred cc--CCCCCCCcCEEEEeccCCChhhHHHHHhh---C--CCceEEeecCccccccccceecccCCccc------------
Q 002615 82 QH--NMHVPSSLKLLVLSGEVLPLSMWDIISKL---F--PNISILNLYGSTEVSGDCTYFDCKRLPSI------------ 142 (900)
Q Consensus 82 ~~--~~~~~~~lr~v~~gGe~l~~~~~~~~~~~---~--~~~~l~~~YG~TE~~~~~~~~~~~~~~~~------------ 142 (900)
.. ...++++||.+++||+++++.+.+.+.+. + +...+++.||+||++..++...+......
T Consensus 267 ~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (545)
T PRK07768 267 QAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALR 346 (545)
T ss_pred cccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccC
Confidence 21 12457899999999999999999988774 3 23469999999999876554332210000
Q ss_pred --c---ccCCCCcceeeeccCCcEEEEecCCCC---CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCC
Q 002615 143 --L---EMSTLKSVPIGLPISNCDIVLVESDTV---KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSC 214 (900)
Q Consensus 143 --~---~~~~~~~~~~G~p~~~~~~~i~d~~~~---~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~ 214 (900)
. ........++|+|++++.++++++++. .++.|||+++|+.+++||++.+...+..
T Consensus 347 ~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~---------------- 410 (545)
T PRK07768 347 RAVPATKGNTRRLATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRGESVTPGYLTMDGFIPAQ---------------- 410 (545)
T ss_pred ceeccCCCCcceEEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEccCcccccccCCCCCcccc----------------
Confidence 0 000123457999999999999986653 4567999999999999999855433221
Q ss_pred CCcceEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEee--cCCceEEEEEEEEecCC
Q 002615 215 GSQTYFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHK--HQGELVILVAFIVLKEK 292 (900)
Q Consensus 215 ~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~--~~~~~~~l~~~v~~~~~ 292 (900)
..++||+|||+++++++|.++++||.||+||++|++|+|.|||+.|.+||.|.+++|++.. +...+..++++++....
T Consensus 411 ~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~ 490 (545)
T PRK07768 411 DADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAF 490 (545)
T ss_pred cCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEeccc
Confidence 1357999999999999999999999999999999999999999999999999997776543 33333445555544332
Q ss_pred CCchHHHHHHHHHHHHhhCCCC--ccCCEEEEcC--CcCCCCCCCcchhhhccccc
Q 002615 293 KTSSEIFLSSIKSWVSSKLPLA--MIPNRFVFMD--SLPMTSSGKVDYASLSASTS 344 (900)
Q Consensus 293 ~~~~~~~~~~l~~~l~~~l~~~--~~P~~~~~v~--~lP~t~~GKidr~~L~~~~~ 344 (900)
. .+....++.+++++.++.+ ..|..+.+++ +||+|++||++|++|++.++
T Consensus 491 ~--~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 491 E--DPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred c--cHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 1 2223345666676665543 5788888886 89999999999999987653
No 117
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=100.00 E-value=2.5e-32 Score=300.33 Aligned_cols=316 Identities=20% Similarity=0.357 Sum_probs=255.0
Q ss_pred ccccccccccccccc-----ccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCc-----------eeeceeE
Q 002615 532 FIQELWKVHMESCVD-----ASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR-----------IECSAAV 595 (900)
Q Consensus 532 ~~~~~W~~~~~~~v~-----~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~-----------~~~~~~~ 595 (900)
..+++|+.+++..+. ++|++ .++.||+++.+|.|+++|..||+++|++..... +..++.+
T Consensus 43 ~~~~~W~~~~g~g~~~~~~~~sPvv----~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v 118 (394)
T PRK11138 43 TPTTVWSTSVGDGVGDYYSRLHPAV----AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV 118 (394)
T ss_pred CcceeeEEEcCCCCccceeeeccEE----ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE
Confidence 466789999987763 47887 588999999999999999999999999877541 1112233
Q ss_pred ecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc---
Q 002615 596 LADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS--- 672 (900)
Q Consensus 596 ~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~--- 672 (900)
+++.||+++.+|.||++|.+||+++|+++.++...++|++.+ +.+++++.++.|+++|.++|+.+|++.....
T Consensus 119 --~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~--~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 194 (394)
T PRK11138 119 --AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSD--GLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLT 194 (394)
T ss_pred --ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEEC--CEEEEECCCCEEEEEEccCCCEeeeecCCCCccc
Confidence 346899999999999999999999999998888888888874 7899999999999999999999999987533
Q ss_pred --cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc-----------eeeeeeeeCCCEEEEEeecCcE
Q 002615 673 --IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA-----------FASLCITSANRHVICCLVDGHV 739 (900)
Q Consensus 673 --~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~-----------~~s~~~~~~~~~i~~~~~~g~v 739 (900)
..++|++.. +.+++++.+|.++++|.++ |+.+|+.....+. ..++ ...++.+|+++.+|.+
T Consensus 195 ~~~~~sP~v~~--~~v~~~~~~g~v~a~d~~~--G~~~W~~~~~~~~~~~~~~~~~~~~~sP--~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 195 LRGESAPATAF--GGAIVGGDNGRVSAVLMEQ--GQLIWQQRISQPTGATEIDRLVDVDTTP--VVVGGVVYALAYNGNL 268 (394)
T ss_pred ccCCCCCEEEC--CEEEEEcCCCEEEEEEccC--ChhhheeccccCCCccchhcccccCCCc--EEECCEEEEEEcCCeE
Confidence 236787765 7899999999999999988 9999997654321 1222 2357899999999999
Q ss_pred EEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEec-CCceeccccccccccccccc
Q 002615 740 VALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSV-GDPITASAYIDEHLQLKLES 817 (900)
Q Consensus 740 ~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~~~ 817 (900)
+++| .+|+++|+.+.+.. ..+ ...++.||+++.+|.++++|.++|+.+|+.+. .....++|.+
T Consensus 269 ~ald~~tG~~~W~~~~~~~--~~~---~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v---------- 333 (394)
T PRK11138 269 VALDLRSGQIVWKREYGSV--NDF---AVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL---------- 333 (394)
T ss_pred EEEECCCCCEEEeecCCCc--cCc---EEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE----------
Confidence 9999 99999999865432 122 33578999999999999999999999998653 2233333333
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccC-CccccCceeeCCEEEEeeeCCeEEEEEc
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQ-GDIFSSPVMIGGRVFVGCRDDYIYCIAL 892 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ss~~~~~~~l~vg~~dg~l~~ld~ 892 (900)
.++.+|+++.+|.|+++|.++| +.+++.++. +.+.++|++.+++||+++++|.||++++
T Consensus 334 ---~~g~l~v~~~~G~l~~ld~~tG-------------~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 334 ---YNGYLVVGDSEGYLHWINREDG-------------RFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred ---ECCEEEEEeCCCEEEEEECCCC-------------CEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence 2789999999999999999887 667777764 4578899999999999999999999975
No 118
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-33 Score=320.84 Aligned_cols=415 Identities=26% Similarity=0.346 Sum_probs=293.4
Q ss_pred CccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 2 QDLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 2 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
...|+.+..+++-..+..+++..+..+..+++..+..++++....+.++..+.+.+++++++..+.+|++.++++.....
T Consensus 229 ~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~ 308 (1032)
T KOG1178|consen 229 FTTFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTT 308 (1032)
T ss_pred cccCCcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCc
Confidence 34577888888867777778888888777776666655554555566689999999999999999999998777643322
Q ss_pred -------c----cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCc
Q 002615 82 -------Q----HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKS 150 (900)
Q Consensus 82 -------~----~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 150 (900)
. ......+.||..+++||+++..+...+...+...-...-|++||....+++..+.........+....
T Consensus 309 ~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~ 388 (1032)
T KOG1178|consen 309 SLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYS 388 (1032)
T ss_pred chhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEe
Confidence 1 11122358999999999999999887666654444555599999998888766554332222221111
Q ss_pred ceeeeccCC--cEEEEecCCCCCCCccEEEEccccccccccCC-----CCCCccchhccCCcccccCcCCCCCcceEecC
Q 002615 151 VPIGLPISN--CDIVLVESDTVKPDEGEIYAGGLCLSNGYFSE-----STFMPSEYVKLHNNSICNCSVSCGSQTYFRTG 223 (900)
Q Consensus 151 ~~~G~p~~~--~~~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~-----~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TG 223 (900)
+|...-+-+ ..+++.. ..+.+||.++.+.+++.++... ...+++.|... ........+++||||
T Consensus 389 ~p~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~l~~~~~~~~~~~~g~~~~~~~~~~------~~~~d~~~~r~y~tg 459 (1032)
T KOG1178|consen 389 VPKFDSIIGSLTVLESLY---RAGGEGEGGVGKGCLGAEQNLSSWVVDGYSTPENFLPN------FLTVDGVKARIYRTG 459 (1032)
T ss_pred ccchhhccCCCcceeeee---ccCcccCCcccceeecccccccceeeccccchhhcCCc------ccccccchhhccccc
Confidence 111111111 1112221 1223355555555554444221 11222222111 112234467999999
Q ss_pred ceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHH
Q 002615 224 DFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSI 303 (900)
Q Consensus 224 Dl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l 303 (900)
|+|+..++|.+.|.||.|+|||+||+|+++.||+.++..||.|.++.+....+...++.+++|++........ ....|
T Consensus 460 D~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~--~~~~i 537 (1032)
T KOG1178|consen 460 DNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSV--LIRDI 537 (1032)
T ss_pred ccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCch--hHHHH
Confidence 9999999999999999999999999999999999999999999999999988887788999999987654432 36789
Q ss_pred HHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhccccccccccccCc----ccccchHHHHHHHHHHhcccCCcccc
Q 002615 304 KSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFTISAQHDA----DETKASDLLQVIRKAFGHALMVEEVL 379 (900)
Q Consensus 304 ~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~i~ 379 (900)
+.++.++|+.||+|..+|.++++|+|++||||+++|..........+... .+...+.....++..|-...+...++
T Consensus 538 ~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~~s~~~~~~~s~~~~~~~~~~~~~~~~v~d~~l~~~~~~~~s 617 (1032)
T KOG1178|consen 538 RNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLEYNSKLTNVQDSSLSEAKDSILSLPLSTVFDLWLSIGSLAIVS 617 (1032)
T ss_pred HHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhhhhhhhcccccceeeccccccccccccchhhhhhhhcCccccC
Confidence 99999999999999999999999999999999999988443332222211 11223344455666666555534578
Q ss_pred cCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhcCC
Q 002615 380 HHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKKGL 427 (900)
Q Consensus 380 ~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~~~ 427 (900)
++++||++|||||.|+++...| +.+++.++..+|+..++..+......
T Consensus 618 ~d~~fF~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~~~~~ 671 (1032)
T KOG1178|consen 618 PDSSFFQLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIRIKSQ 671 (1032)
T ss_pred CCcchhhhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhhhhhh
Confidence 8899999999999999998765 46788899999999998877665433
No 119
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-32 Score=296.36 Aligned_cols=310 Identities=18% Similarity=0.230 Sum_probs=241.8
Q ss_pred CCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC----
Q 002615 9 GEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN---- 84 (900)
Q Consensus 9 ~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~---- 84 (900)
..|++++.+|++|.+--......+..|+++.+.. .|+..+.+.|++.++|++.+||-+|+++-+...+...
T Consensus 301 ~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~-----gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgf 375 (691)
T KOG1256|consen 301 GDDVYLSYLPLAHIFERVVELYTFYIGAKIGFAR-----GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGF 375 (691)
T ss_pred cCceEEEeCcHHHHHHHHHHHhHhhcccEEEEec-----CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchH
Confidence 4699999999999998877666679999999984 6888899999999999999999999887643322110
Q ss_pred ----------------------CC-----------------CCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCcc
Q 002615 85 ----------------------MH-----------------VPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGST 125 (900)
Q Consensus 85 ----------------------~~-----------------~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~T 125 (900)
.. .-..+|.+++|++|+++++...++..+ +++|+++||+|
T Consensus 376 lkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlT 454 (691)
T KOG1256|consen 376 LKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLT 454 (691)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-Cceeeeccccc
Confidence 00 013789999999999999999999887 89999999999
Q ss_pred ccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCC----CCCCccEEEEccccccccccCCCCCCccchhc
Q 002615 126 EVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVK 201 (900)
Q Consensus 126 E~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~ 201 (900)
||++.++..... +....++|.|+|+++++++|... ..+..|||||+|++|+.||+++|+.|.+.|.
T Consensus 455 Ets~g~~~~~~~---------d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~id- 524 (691)
T KOG1256|consen 455 ETSAGTTLTLPG---------DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAID- 524 (691)
T ss_pred ccCCceEeccCC---------CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhc-
Confidence 999655543221 22567899999999999987543 2345699999999999999999999999984
Q ss_pred cCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEeecCCce
Q 002615 202 LHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGEL 280 (900)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 280 (900)
.++|++|||+|+++++|.|.+.||+++++|+ .|+.|.|+.||++..+.+.|.+.+|.+....
T Consensus 525 --------------eDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~--- 587 (691)
T KOG1256|consen 525 --------------EDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR--- 587 (691)
T ss_pred --------------cccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---
Confidence 4899999999999999999999999999999 9999999999999999999999999876644
Q ss_pred EEEEEEEEecCCCCch---------------------HHHHHHHHHHHH-hhCCCCccCCEEEEc------CCcCCCCCC
Q 002615 281 VILVAFIVLKEKKTSS---------------------EIFLSSIKSWVS-SKLPLAMIPNRFVFM------DSLPMTSSG 332 (900)
Q Consensus 281 ~~l~~~v~~~~~~~~~---------------------~~~~~~l~~~l~-~~l~~~~~P~~~~~v------~~lP~t~~G 332 (900)
..|+|.|+++...... +...+++.+..+ ..|..+..-..+.+. +.=-+||+-
T Consensus 588 ~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTl 667 (691)
T KOG1256|consen 588 SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTL 667 (691)
T ss_pred hcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhh
Confidence 2789999886532110 111223333222 234444444444442 222468899
Q ss_pred Ccchhhhcccccccccccc
Q 002615 333 KVDYASLSASTSFTISAQH 351 (900)
Q Consensus 333 Kidr~~L~~~~~~~~~~~~ 351 (900)
|+.|..|.+.|..++...|
T Consensus 668 K~KR~~l~~~yk~~Id~mY 686 (691)
T KOG1256|consen 668 KIKRPQLLKYYKKQIDELY 686 (691)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 9999999998887765544
No 120
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.98 E-value=3.2e-32 Score=280.51 Aligned_cols=320 Identities=23% Similarity=0.330 Sum_probs=247.9
Q ss_pred CCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHH----HHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 5 YPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIH----FLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~----~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
..+.+.|+++..+|+.|..-+..=+.+++-|+++-..++..+......+.+ .+...++|+|.++|.+++++.+...
T Consensus 274 ~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl 353 (678)
T KOG1180|consen 274 PELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVL 353 (678)
T ss_pred cccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHH
Confidence 467899999999999999999887889999999998876554433323322 3467899999999999998764322
Q ss_pred hccCC----------------------------------------CCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEe
Q 002615 81 SQHNM----------------------------------------HVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILN 120 (900)
Q Consensus 81 ~~~~~----------------------------------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~ 120 (900)
+.... ..--.||++++||+||+++..+.+.-.+ .+++..
T Consensus 354 ~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~q 432 (678)
T KOG1180|consen 354 SKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQ 432 (678)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccc
Confidence 11000 0112799999999999999988877776 679999
Q ss_pred ecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCC------CCCCccEEEEccccccccccCCCCC
Q 002615 121 LYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDT------VKPDEGEIYAGGLCLSNGYFSESTF 194 (900)
Q Consensus 121 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~------~~~~~GEl~v~g~~~~~gY~~~~~~ 194 (900)
.||.||++..++..+.. +.....+|.|++-+++.++|-+. ..++.|||+|+|+.+..||+++|+.
T Consensus 433 GYGLTEtca~~tv~e~~---------d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ek 503 (678)
T KOG1180|consen 433 GYGLTETCAAATVLEPE---------DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEK 503 (678)
T ss_pred cccccchhcccEecChh---------hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhh
Confidence 99999999887765433 23556899999999999997432 2236799999999999999999999
Q ss_pred CccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEE
Q 002615 195 MPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVS 273 (900)
Q Consensus 195 ~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~ 273 (900)
|.+.|... ++.+||+|||+|++++||.|.++.|++|.||. +|+-|+++-||.+++..|-|...+|.+
T Consensus 504 T~e~ft~~------------~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyA 571 (678)
T KOG1180|consen 504 TKEDFTVE------------DGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYA 571 (678)
T ss_pred hhhhceec------------CCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEec
Confidence 99999761 25679999999999999999999999999999 999999999999999999999999988
Q ss_pred eecCCceEEEEEEEEecCCCC----------c------------hHHHHHHHHHHH-HhhCCCCccCCEEEEcCCc--C-
Q 002615 274 HKHQGELVILVAFIVLKEKKT----------S------------SEIFLSSIKSWV-SSKLPLAMIPNRFVFMDSL--P- 327 (900)
Q Consensus 274 ~~~~~~~~~l~~~v~~~~~~~----------~------------~~~~~~~l~~~l-~~~l~~~~~P~~~~~v~~l--P- 327 (900)
..... .++++|++..... . .++...+|.+.- +++|....+|..|++.++- |
T Consensus 572 d~~~s---~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPe 648 (678)
T KOG1180|consen 572 DSNKS---KPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPE 648 (678)
T ss_pred ccccc---eeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCC
Confidence 76653 6899999874320 0 011122333333 5678899999999887651 2
Q ss_pred ---CCCCCCcchhhhcccccccccc
Q 002615 328 ---MTSSGKVDYASLSASTSFTISA 349 (900)
Q Consensus 328 ---~t~~GKidr~~L~~~~~~~~~~ 349 (900)
.|+.-|+.|+.++..+..+++.
T Consensus 649 nGlvT~A~KLKRk~I~~~~k~ei~~ 673 (678)
T KOG1180|consen 649 NGLVTAALKLKRKEILAAYKKEIDR 673 (678)
T ss_pred ccccHHHHHhhHHHHHHHHHHHHHH
Confidence 3445588888888776655443
No 121
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.98 E-value=7.4e-30 Score=285.90 Aligned_cols=321 Identities=19% Similarity=0.328 Sum_probs=244.0
Q ss_pred cccccccccccc--ccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCc-ee------eceeEecCCCE
Q 002615 531 GFIQELWKVHME--SCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR-IE------CSAAVLADFSQ 601 (900)
Q Consensus 531 ~~~~~~W~~~~~--~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~-~~------~~~~~~~~~~~ 601 (900)
..+++.|+++++ ..+.++|++ .+++||+++.++.|+++|+.||+++|++..... .. .......+++.
T Consensus 37 ~~~~~~W~~~~~~~~~~~~sPvv----~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~ 112 (488)
T cd00216 37 KKLKVAWTFSTGDERGQEGTPLV----VDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRK 112 (488)
T ss_pred hcceeeEEEECCCCCCcccCCEE----ECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCe
Confidence 346788999998 678999998 588999999999999999999999999876543 11 11111112268
Q ss_pred EEEEeeCCEEEEEECCCCcEEEEEecCCc------eeeeeeEeCCCCEEEEecC---------CCeEEEEECCCCeEEEe
Q 002615 602 VVVGCYKGKIYFLDYLTGDIYWTFQTCGE------VKCQPVVDAPRQLIWCGSH---------DHNLYALDFRNYRCVYK 666 (900)
Q Consensus 602 i~vg~~dg~l~~~d~~tG~~~w~~~~~~~------~~~~~~~~~~~~~i~~gs~---------dg~l~~~d~~~g~~~w~ 666 (900)
||+++.+|.|+++|.+||+++|+++.... +.++|++.+ +.+|+++. ++.++++|.++|+.+|+
T Consensus 113 V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~--~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 113 VFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVK--KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred EEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEEC--CEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 99999999999999999999999988765 567788775 77888763 57899999999999999
Q ss_pred eccC---------------------CccccCceeeccCCEEEEEeCCC------------------cEEEEEcCCCCcee
Q 002615 667 LPCG---------------------GSIFGSPAIDEVHDVLYVASTSG------------------RLTAISVKALPFHT 707 (900)
Q Consensus 667 ~~~~---------------------~~~~~~~~~~~~~~~l~v~t~~g------------------~l~~~~~~~~~g~~ 707 (900)
++.. +.++++|+++..++.||+++.++ .++++|.++ |+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~t--G~~ 268 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADT--GKV 268 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCC--CCE
Confidence 8663 23456778876678999999765 799999998 999
Q ss_pred eeEeecCCcc------eeeeeee----eCCC---EEEEEeecCcEEEEC-CCCCEEeeecCCC-ceeccccccccCCCeE
Q 002615 708 LWLHELEVPA------FASLCIT----SANR---HVICCLVDGHVVALD-SSGSIIWRCRTGG-PIFAGPCTSFALPSQV 772 (900)
Q Consensus 708 ~w~~~~~~~~------~~s~~~~----~~~~---~i~~~~~~g~v~~~d-~~G~~~w~~~~~~-~~~~~~~~~~~~~~~l 772 (900)
+|+++...+. ...+.+. .+++ .+++++.+|.++++| .+|+++|+.+... .... ..+.+
T Consensus 269 ~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~-------~~~~v 341 (488)
T cd00216 269 KWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAY-------DPGLV 341 (488)
T ss_pred EEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecccccc-------CCceE
Confidence 9998754321 1122222 1222 588899999999999 9999999986541 1111 12567
Q ss_pred EEEe------------------eCCeEEEEeCCCCceeeEEecCCceec----ccccccccccccccccCCCeEEEEEcC
Q 002615 773 LICS------------------RNGSIYSFEQESGNLLWEYSVGDPITA----SAYIDEHLQLKLESCLSIDRLVCICTS 830 (900)
Q Consensus 773 ~~g~------------------~dg~l~~~d~~tG~~~w~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~g~~ 830 (900)
|+++ .+|.|+++|..+|+.+|+.+....... .+. ....+...++.+|+++.
T Consensus 342 yv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~-------~~~~~~~~g~~v~~g~~ 414 (488)
T cd00216 342 YLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPH-------WGGSLATAGNLVFAGAA 414 (488)
T ss_pred EEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcc-------cCcceEecCCeEEEECC
Confidence 7653 468999999999999999887621100 000 00112234789999999
Q ss_pred CCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCe
Q 002615 831 SGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDY 886 (900)
Q Consensus 831 ~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~ 886 (900)
+|.|+++|.++| +++|++++++.+.++|++ .++++|+++.+|.
T Consensus 415 dG~l~ald~~tG-------------~~lW~~~~~~~~~a~P~~~~~~g~~yv~~~~g~ 459 (488)
T cd00216 415 DGYFRAFDATTG-------------KELWKFRTPSGIQATPMTYEVNGKQYVGVMVGG 459 (488)
T ss_pred CCeEEEEECCCC-------------ceeeEEECCCCceEcCEEEEeCCEEEEEEEecC
Confidence 999999999988 778889999999999984 5999999998874
No 122
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.97 E-value=3.4e-30 Score=288.35 Aligned_cols=252 Identities=31% Similarity=0.475 Sum_probs=212.3
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.+++.++|+++...|++|.+++..++.++..|+++++++.... ..+..+.+.++++++|.+.++|++++.+.+...
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~-- 230 (408)
T TIGR01733 154 RRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEE-RDAALLAALIAEHPVTVLNLTPSLLALLAAALP-- 230 (408)
T ss_pred HhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhc-cCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh--
Confidence 35678899999999999999999999999999999999864332 257889999999999999999999999987654
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDI 162 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 162 (900)
..+++||.+++||+++++++++.+.+.++++.+++.||+||++.+++........ .... ...++|.|++++.+
T Consensus 231 ---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~---~~~~-~~~~~G~~~~~~~~ 303 (408)
T TIGR01733 231 ---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADD---APRE-SPVPIGRPLANTRL 303 (408)
T ss_pred ---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccc---cCCc-cccccCcccCCceE
Confidence 2368999999999999999999999999779999999999999877643322211 0011 26789999999999
Q ss_pred EEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcc
Q 002615 163 VLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGR 239 (900)
Q Consensus 163 ~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR 239 (900)
+|+++++ +.++.|||+++|+.++.||+++++.+.+.|...+... .++.+||+|||+++++++|.+++.||
T Consensus 304 ~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~-------~~~~~~~~TGDl~~~d~~g~~~~~gR 376 (408)
T TIGR01733 304 YVLDDDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAG-------GDGARLYRTGDLVRYLPDGNLEFLGR 376 (408)
T ss_pred EEECCCCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCC-------CCCceEEECCceEEEcCCCCEEEeec
Confidence 9998765 3456799999999999999999999988886533221 11234999999999999999999999
Q ss_pred cCCcEEECceeeChHHHHHHHhCCCCeeEEEE
Q 002615 240 KDRTIKINGQRMALEEIEHTLRGHPDVVDTAV 271 (900)
Q Consensus 240 ~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v 271 (900)
.||+|+++|++|+|.+||++|..++.|.+|+|
T Consensus 377 ~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 377 IDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred cCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 99999999999999999999999999998875
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.97 E-value=7.4e-30 Score=276.09 Aligned_cols=254 Identities=17% Similarity=0.157 Sum_probs=197.1
Q ss_pred cCCCCC--CcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHh
Q 002615 4 LYPLHG--EELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQ 80 (900)
Q Consensus 4 ~~~~~~--~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~ 80 (900)
.++++. .|++++.+|++|..++ ..++.++..|+++++.+ .+++..+++.++.+ |++.++|++++.+.+..
T Consensus 130 ~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~----~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~- 202 (386)
T TIGR02372 130 ILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA----AAPASGIMRHARPG--DLIVGTPFIWEQLADLD- 202 (386)
T ss_pred HhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC----CCChHHHHHhhccC--CEEEECcHHHHHHHhhC-
Confidence 345543 4689999999998776 55888999999999885 46777788777643 89999999999987542
Q ss_pred hccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCc
Q 002615 81 SQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNC 160 (900)
Q Consensus 81 ~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~ 160 (900)
..++++|. ++||+++++++++.+.+. +..++++.||+||+++++.... +...|+|+++.
T Consensus 203 -----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~--------------~~~~~~~~p~~ 261 (386)
T TIGR02372 203 -----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA--------------PDDPFRLLPDL 261 (386)
T ss_pred -----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC--------------CCCCcccCCCc
Confidence 22567876 688999999999999875 2347999999999986543210 11235666665
Q ss_pred EEEEecCCCCCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEccc
Q 002615 161 DIVLVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRK 240 (900)
Q Consensus 161 ~~~i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~ 240 (900)
++.+- + |.- .| ...|++|||+++++++|+++|+||+
T Consensus 262 ~~~~~--~------~~~--~g----------------------------------~~~~~~tgD~g~~d~~G~l~i~GR~ 297 (386)
T TIGR02372 262 ACFAD--T------LSS--AG----------------------------------LARRLDLQDRLAWDKDGGFTILGRK 297 (386)
T ss_pred cccCC--C------ccC--CC----------------------------------ccceeecCceEEEcCCCcEEEeccc
Confidence 54321 0 100 00 1246899999999999999999999
Q ss_pred CCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEE
Q 002615 241 DRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRF 320 (900)
Q Consensus 241 dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~ 320 (900)
||+||++|++|+|.+||++|.+||.|.+++|... +..+.++|++++... .+...++|+++++++||.|++|..+
T Consensus 298 dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~~-----g~~~~a~vv~~~~~~-~~~~~~~l~~~~~~~L~~~~~P~~i 371 (386)
T TIGR02372 298 DEILQVGGVNVSPGHVRDILERNPRVRAAAVRLD-----GRRLKAFIVVAEDAD-EAELEIELRATAARHLPAPARPDRF 371 (386)
T ss_pred CCEEEECCEEEcHHHHHHHHHcCCCceEEEEEcC-----CceEEEEEEECCCCC-hHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 9999999999999999999999999999988632 236788888875432 2334568999999999999999999
Q ss_pred EEcCCcCCCCCCCcc
Q 002615 321 VFMDSLPMTSSGKVD 335 (900)
Q Consensus 321 ~~v~~lP~t~~GKid 335 (900)
+++++||+|++||++
T Consensus 372 ~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 372 RFGTELPRTGAGKLA 386 (386)
T ss_pred EEcccCCCCCCCCcC
Confidence 999999999999985
No 124
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.96 E-value=9.1e-28 Score=263.69 Aligned_cols=285 Identities=22% Similarity=0.361 Sum_probs=230.0
Q ss_pred CCCcEEEEEecCCcee-----eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecC
Q 002615 575 KRSSVLWEIKLEGRIE-----CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSH 649 (900)
Q Consensus 575 ~tG~~~w~~~~~~~~~-----~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~ 649 (900)
.+++++|+++++.... .++.+. ++.+|+++.+|.|++||..+|+++|+++.++.+...|++. ++.+|+++.
T Consensus 38 ~~~~~~W~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~--~~~v~v~~~ 113 (377)
T TIGR03300 38 VKVDQVWSASVGDGVGHYYLRLQPAVA--GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGAD--GGLVFVGTE 113 (377)
T ss_pred CcceeeeEEEcCCCcCccccccceEEE--CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEc--CCEEEEEcC
Confidence 4688999998876542 344444 4689999999999999999999999999988777777765 488999999
Q ss_pred CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcce---eeeeeeeC
Q 002615 650 DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAF---ASLCITSA 726 (900)
Q Consensus 650 dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~---~s~~~~~~ 726 (900)
++.++++|.++|+.+|+....+.+.++|++.+ +.+++++.+|.++++|.++ |+.+|+.....+.. ....+...
T Consensus 114 ~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~--~~v~v~~~~g~l~a~d~~t--G~~~W~~~~~~~~~~~~~~~sp~~~ 189 (377)
T TIGR03300 114 KGEVIALDAEDGKELWRAKLSSEVLSPPLVAN--GLVVVRTNDGRLTALDAAT--GERLWTYSRVTPALTLRGSASPVIA 189 (377)
T ss_pred CCEEEEEECCCCcEeeeeccCceeecCCEEEC--CEEEEECCCCeEEEEEcCC--CceeeEEccCCCceeecCCCCCEEE
Confidence 99999999999999999999888888888865 8999999999999999988 99999987765432 11122234
Q ss_pred CCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-----------eeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeE
Q 002615 727 NRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-----------IFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWE 794 (900)
Q Consensus 727 ~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-----------~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~ 794 (900)
++.+++++.+|.++++| .+|+.+|+.....+ +.+.| ...++.+|+++.+|.++++|.++|+++|+
T Consensus 190 ~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p---~~~~~~vy~~~~~g~l~a~d~~tG~~~W~ 266 (377)
T TIGR03300 190 DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDP---VVDGGQVYAVSYQGRVAALDLRSGRVLWK 266 (377)
T ss_pred CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCcc---EEECCEEEEEEcCCEEEEEECCCCcEEEe
Confidence 57899998899999999 89999998764322 11223 33467999999999999999999999998
Q ss_pred EecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeee-ccCCccccCcee
Q 002615 795 YSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKL-ELQGDIFSSPVM 873 (900)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ss~~~ 873 (900)
.+... ...+ ...++.+|+++.+|.|+++|..+| +..|.. .+.+...++|++
T Consensus 267 ~~~~~--~~~p-------------~~~~~~vyv~~~~G~l~~~d~~tG-------------~~~W~~~~~~~~~~ssp~i 318 (377)
T TIGR03300 267 RDASS--YQGP-------------AVDDNRLYVTDADGVVVALDRRSG-------------SELWKNDELKYRQLTAPAV 318 (377)
T ss_pred eccCC--ccCc-------------eEeCCEEEEECCCCeEEEEECCCC-------------cEEEccccccCCccccCEE
Confidence 86432 1222 223789999999999999999877 445554 566677889999
Q ss_pred eCCEEEEeeeCCeEEEEEccccccc
Q 002615 874 IGGRVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 874 ~~~~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
.+++||+++.+|.||++|..+|++.
T Consensus 319 ~g~~l~~~~~~G~l~~~d~~tG~~~ 343 (377)
T TIGR03300 319 VGGYLVVGDFEGYLHWLSREDGSFV 343 (377)
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 9999999999999999999999875
No 125
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.96 E-value=2.1e-27 Score=261.31 Aligned_cols=283 Identities=19% Similarity=0.345 Sum_probs=224.3
Q ss_pred CCCcEEEEEecCCcee-----eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCC-----------ceeeeeeEe
Q 002615 575 KRSSVLWEIKLEGRIE-----CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCG-----------EVKCQPVVD 638 (900)
Q Consensus 575 ~tG~~~w~~~~~~~~~-----~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~-----------~~~~~~~~~ 638 (900)
..++++|+..++..+. .++++. ++.||+++.+|.|+++|.+||+++|+++... .+...|++.
T Consensus 42 ~~~~~~W~~~~g~g~~~~~~~~sPvv~--~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~ 119 (394)
T PRK11138 42 FTPTTVWSTSVGDGVGDYYSRLHPAVA--YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVA 119 (394)
T ss_pred CCcceeeEEEcCCCCccceeeeccEEE--CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEE
Confidence 4577888888765432 245554 4589999999999999999999999987754 112334444
Q ss_pred CCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcce
Q 002615 639 APRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 639 ~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
++.||+++.++.++++|.++|+.+|+.+..+...++|++.+ +.+|+++.+|.++++|.++ |+.+|++....+..
T Consensus 120 --~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~--~~v~v~~~~g~l~ald~~t--G~~~W~~~~~~~~~ 193 (394)
T PRK11138 120 --GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSD--GLVLVHTSNGMLQALNESD--GAVKWTVNLDVPSL 193 (394)
T ss_pred --CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEEC--CEEEEECCCCEEEEEEccC--CCEeeeecCCCCcc
Confidence 47899999999999999999999999999888889998876 8999999999999999998 99999998754322
Q ss_pred -----eeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-----------eeccccccccCCCeEEEEeeCCeE
Q 002615 719 -----ASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-----------IFAGPCTSFALPSQVLICSRNGSI 781 (900)
Q Consensus 719 -----~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-----------~~~~~~~~~~~~~~l~~g~~dg~l 781 (900)
.++. ..++.+++++.+|.++++| .+|+.+|+.+...+ +.+.| ...++.+|+++.+|.+
T Consensus 194 ~~~~~~sP~--v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP---~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 194 TLRGESAPA--TAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTP---VVVGGVVYALAYNGNL 268 (394)
T ss_pred cccCCCCCE--EECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCc---EEECCEEEEEEcCCeE
Confidence 2333 3467899999999999999 99999999764332 12334 3347899999999999
Q ss_pred EEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeee
Q 002615 782 YSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKL 861 (900)
Q Consensus 782 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 861 (900)
+++|.++|+.+|+.+..... .+ ...++.+|+++.+|.++++|.++| +..|+.
T Consensus 269 ~ald~~tG~~~W~~~~~~~~--~~-------------~~~~~~vy~~~~~g~l~ald~~tG-------------~~~W~~ 320 (394)
T PRK11138 269 VALDLRSGQIVWKREYGSVN--DF-------------AVDGGRIYLVDQNDRVYALDTRGG-------------VELWSQ 320 (394)
T ss_pred EEEECCCCCEEEeecCCCcc--Cc-------------EEECCEEEEEcCCCeEEEEECCCC-------------cEEEcc
Confidence 99999999999997654321 11 122789999999999999999877 334433
Q ss_pred -ccCCccccCceeeCCEEEEeeeCCeEEEEEccccccc
Q 002615 862 -ELQGDIFSSPVMIGGRVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 862 -~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
.+.+...++|++.+++||+++.+|.||++|..+|++.
T Consensus 321 ~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~ 358 (394)
T PRK11138 321 SDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFV 358 (394)
T ss_pred cccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCCEE
Confidence 3445667899999999999999999999999999875
No 126
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.96 E-value=8.5e-29 Score=277.74 Aligned_cols=214 Identities=28% Similarity=0.467 Sum_probs=178.3
Q ss_pred cEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc--cCCCC
Q 002615 11 ELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ--HNMHV 87 (900)
Q Consensus 11 d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~--~~~~~ 87 (900)
|++++.+|++|.+++ ..++.++..|+++++++.... .++..+++.++++++|++.++|++++.+++..+.. .....
T Consensus 197 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~ 275 (417)
T PF00501_consen 197 DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKD 275 (417)
T ss_dssp TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTT
T ss_pred ceEEeeccccccccccccccccccccccccccccccc-cccccchhcccccccccccccccccccccccccccccccccc
Confidence 699999999999999 789999999999999975443 45788999999999999999999999998843222 11234
Q ss_pred CCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecC
Q 002615 88 PSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVES 167 (900)
Q Consensus 88 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 167 (900)
+++||.+++||+++++++.+++++.++.+++++.||+||++..++..... .......++|+|+++++++|+|+
T Consensus 276 l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~-------~~~~~~~~~G~~~~~~~~~ivd~ 348 (417)
T PF00501_consen 276 LSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPE-------DDIEKPGSVGKPLPGVEVKIVDP 348 (417)
T ss_dssp GTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETT-------THHSSTTSEBEESTTEEEEEECT
T ss_pred cccccccccccccCChhhccccccccccccceecccccccceeeeccccc-------ccccccccccccccccccccccc
Confidence 77899999999999999999999999667999999999999887644200 11114567899999999999987
Q ss_pred C-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCc
Q 002615 168 D-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRT 243 (900)
Q Consensus 168 ~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ 243 (900)
+ + +.++.|||+|+|+.++.||+++|+.+.+.|.. ++||+|||+|++++||.++++||.||+
T Consensus 349 ~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~---------------~~~~~TGD~g~~d~~G~~~~~GR~~~~ 413 (417)
T PF00501_consen 349 NTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFID---------------DGWYRTGDLGRLDEDGYLYILGRSDDM 413 (417)
T ss_dssp TTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEET---------------TSEEEEEEEEEEETTSEEEEEEEGSCE
T ss_pred cccccccccccccccccCCccceeeecccccccccccc---------------ccceecceEEEECCCCeEEEEEeeCCE
Confidence 6 3 35677999999999999999998888888742 469999999999999999999999999
Q ss_pred EEEC
Q 002615 244 IKIN 247 (900)
Q Consensus 244 ik~~ 247 (900)
||++
T Consensus 414 i~~~ 417 (417)
T PF00501_consen 414 IKVR 417 (417)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9985
No 127
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.96 E-value=2.6e-27 Score=264.15 Aligned_cols=287 Identities=18% Similarity=0.229 Sum_probs=206.2
Q ss_pred cCCCCCCcEEEEccCcchHhH-HHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 4 LYPLHGEELLLFKTSISFIDH-LQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 4 ~~~~~~~d~~l~~~p~~~~~~-~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
.++++++|+++...++.+..+ +...+.++..|++++..+ ..++..+++.|+++++|++.++|+++..|++.....
T Consensus 113 ~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~ 188 (422)
T TIGR02155 113 AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS----GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRM 188 (422)
T ss_pred HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC----CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHc
Confidence 368899999998777654333 334566788899998775 346788999999999999999999999998765543
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeecc--CCc
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPI--SNC 160 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~--~~~ 160 (900)
.......+||.+++|||++++++.+.+.+.| ++++++.||+||+++......|... ..|.++ ++.
T Consensus 189 ~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~------------~~g~~~~~~~~ 255 (422)
T TIGR02155 189 GIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLSEVIGPGVAMECVET------------QDGLHIWEDHF 255 (422)
T ss_pred CCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccchhhcCCceeeccccc------------CCCceEecCee
Confidence 2212235899999999999999999999988 7899999999998532222222110 012222 356
Q ss_pred EEEEecCC-C---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccC-C---
Q 002615 161 DIVLVESD-T---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQS-G--- 232 (900)
Q Consensus 161 ~~~i~d~~-~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~-G--- 232 (900)
.++|+|++ + ++++.|||++++. +...| ...||+|||+++++++ |
T Consensus 256 ~~eivd~~~g~~v~~Ge~Gelvvt~~------------~~~~~----------------p~~ry~TGDl~~~~~~~Gr~~ 307 (422)
T TIGR02155 256 YPEIIDPHTGEVLPDGEEGELVFTTL------------TKEAL----------------PVIRYRTRDLTRLLPGTARTM 307 (422)
T ss_pred EEEEECCCCCCCCCCCCeeEEEEecC------------Ccccc----------------ceeeEEcCcEEEEECCCCCcc
Confidence 67888853 3 3466799999863 12222 2468999999999876 4
Q ss_pred --cEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCC------CchHHHHHHHH
Q 002615 233 --DLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKK------TSSEIFLSSIK 304 (900)
Q Consensus 233 --~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~------~~~~~~~~~l~ 304 (900)
.+++.||.||+||++|.+|+|.+||.+|.+||.|.....+.....+....+.+.++..... ...+.+.++|+
T Consensus 308 ~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~ 387 (422)
T TIGR02155 308 RRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQ 387 (422)
T ss_pred cccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999844444444433334566666655332 11223356788
Q ss_pred HHHHhhCCCCccCCEEEEcCCcCCCCCCCcchh
Q 002615 305 SWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYA 337 (900)
Q Consensus 305 ~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~ 337 (900)
+.+++.+..+.. -.++.+++||+|+ ||+.|.
T Consensus 388 ~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 388 HTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred HHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 888888876632 2333457999988 999874
No 128
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.94 E-value=1.7e-25 Score=232.25 Aligned_cols=308 Identities=19% Similarity=0.234 Sum_probs=240.5
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..|+++++|+++..+|++|.++. ..+-.+|..|+|+|+-. +++.+.+|+...+|++|+++-.--+.+.|+..+..
T Consensus 276 ~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~Vlrk----KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~ 351 (649)
T KOG1179|consen 276 YVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRK----KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPS 351 (649)
T ss_pred HHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEec----ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCC
Confidence 36899999999999999998765 66999999999999997 89999999999999999999999999999987655
Q ss_pred ccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeee------
Q 002615 82 QHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGL------ 155 (900)
Q Consensus 82 ~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~------ 155 (900)
.... -..+|..+ |.-+.+++|+.|.++|.-.+|.+.||+||.....+.+.. ..+.+|+
T Consensus 352 ~~er--~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~------------~vGA~G~~~~~~~ 415 (649)
T KOG1179|consen 352 PEER--QHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDG------------RVGACGFMSRLLK 415 (649)
T ss_pred hhhc--CceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecC------------ccccccchhhhhh
Confidence 4332 35666665 788999999999999977789999999998765443321 1111221
Q ss_pred ccCCcEEEEe---------cCCC-----CCCCccEEEEc----cc-cccccccCCCCCCccchhccCCcccccCcCCCCC
Q 002615 156 PISNCDIVLV---------ESDT-----VKPDEGEIYAG----GL-CLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGS 216 (900)
Q Consensus 156 p~~~~~~~i~---------d~~~-----~~~~~GEl~v~----g~-~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 216 (900)
-+.-+++.-+ |+++ +++++|.|+-+ .| .-+.||.+.++.+..+...+... .+
T Consensus 416 ~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFk---------kG 486 (649)
T KOG1179|consen 416 LLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFK---------KG 486 (649)
T ss_pred hccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhc---------cC
Confidence 1112222222 2233 45677755321 22 22789999888888887664433 47
Q ss_pred cceEecCceEEEccCCcEEEEcccCCcEEECceeeChHHHHHHHhCCCCeeEEEEEEeecCC-ceEEEEEEEEecCCCCc
Q 002615 217 QTYFRTGDFARRIQSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVVDTAVVSHKHQG-ELVILVAFIVLKEKKTS 295 (900)
Q Consensus 217 ~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~-~~~~l~~~v~~~~~~~~ 295 (900)
+-||.|||+-.+|+.|+|||..|..|...-.|++|+..|||.+|.....++++.|.+..-++ ++..=.|.|+.++..
T Consensus 487 D~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~-- 564 (649)
T KOG1179|consen 487 DVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTT-- 564 (649)
T ss_pred cEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcc--
Confidence 89999999999999999999999999999999999999999999999999999998865543 222333445544432
Q ss_pred hHHHHHHHHHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhccc
Q 002615 296 SEIFLSSIKSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSAS 342 (900)
Q Consensus 296 ~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~ 342 (900)
+.+.+.+-+++++.||+|.+|..+.+.+++++|.+=|..+..|.+.
T Consensus 565 -~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 565 -EKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred -cchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 3446788999999999999999999999999999999999999764
No 129
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.94 E-value=6.8e-26 Score=268.25 Aligned_cols=239 Identities=32% Similarity=0.536 Sum_probs=204.8
Q ss_pred ccCCCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhc
Q 002615 3 DLYPLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQ 82 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~ 82 (900)
+.|+++.+|+++...++.||.++.++|.++..|+++++.+ .....++..+.+.+.++++|++..+|+++..++......
T Consensus 400 ~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~-~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~ 478 (642)
T COG1020 400 ARFGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAP-ALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAP 478 (642)
T ss_pred HhcCCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecC-ccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhc
Confidence 4588999999999999999999999999999999999995 555789999999999999999999999999988752222
Q ss_pred cCCCCCCCcCEEEEeccCCChhhHHHHHhhCC-CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcE
Q 002615 83 HNMHVPSSLKLLVLSGEVLPLSMWDIISKLFP-NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCD 161 (900)
Q Consensus 83 ~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 161 (900)
........+|.+++|||+++..+...+....+ ...+.|.||+||++..++.+...... . ..+++|+|+++..
T Consensus 479 ~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~------~-~~~piG~p~~n~~ 551 (642)
T COG1020 479 DLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAEL------E-SRVPIGRPVANTQ 551 (642)
T ss_pred cccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEccccc------C-CCCCcceeeCCCe
Confidence 22122345999999999999999998887654 57899999999988877766544321 1 1679999999999
Q ss_pred EEEecCCC---CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEc
Q 002615 162 IVLVESDT---VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLG 238 (900)
Q Consensus 162 ~~i~d~~~---~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~G 238 (900)
++|+|... +.+..||++++|.++++||+++|+.|+++|+.. ++|+|||++++.+||.+.++|
T Consensus 552 ~~ild~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~---------------~~y~tgD~~r~~~dg~~e~lg 616 (642)
T COG1020 552 LYILDQGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIAL---------------RLYRTGDLARPLADGALEYLG 616 (642)
T ss_pred EEEECCCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhc---------------cCccCCCeeeECCCCeEEEec
Confidence 99998444 345669999999999999999999999999761 489999999999999999999
Q ss_pred ccCCcEEECceeeChHHHHHHHhCCC
Q 002615 239 RKDRTIKINGQRMALEEIEHTLRGHP 264 (900)
Q Consensus 239 R~dd~ik~~G~rv~~~~iE~~l~~~~ 264 (900)
|.|+|||++|+||++.|||..+.++|
T Consensus 617 r~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 617 RKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred cccceeEeceEecCcHHHHHHHhcCC
Confidence 99999999999999999999998875
No 130
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.94 E-value=2.2e-24 Score=241.84 Aligned_cols=292 Identities=21% Similarity=0.293 Sum_probs=212.9
Q ss_pred EECCCCcEEEEEecC--CceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCc-e------eeeeeEeCCCC
Q 002615 572 ADAKRSSVLWEIKLE--GRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGE-V------KCQPVVDAPRQ 642 (900)
Q Consensus 572 ~d~~tG~~~w~~~~~--~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~-~------~~~~~~~~~~~ 642 (900)
-+..++++.|++..+ ..+..++.+.. +.+|+++.++.|+++|.+||+++|+++.... . ...++...+++
T Consensus 34 ~n~~~~~~~W~~~~~~~~~~~~sPvv~~--g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~ 111 (488)
T cd00216 34 ANVKKLKVAWTFSTGDERGQEGTPLVVD--GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPR 111 (488)
T ss_pred hhhhcceeeEEEECCCCCCcccCCEEEC--CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCC
Confidence 344568889998887 45666676653 4799999999999999999999999887543 1 11111121237
Q ss_pred EEEEecCCCeEEEEECCCCeEEEeeccCCc------cccCceeeccCCEEEEEeC---------CCcEEEEEcCCCCcee
Q 002615 643 LIWCGSHDHNLYALDFRNYRCVYKLPCGGS------IFGSPAIDEVHDVLYVAST---------SGRLTAISVKALPFHT 707 (900)
Q Consensus 643 ~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~------~~~~~~~~~~~~~l~v~t~---------~g~l~~~~~~~~~g~~ 707 (900)
.||+++.++.|+++|.++|+.+|++..... +.++|.+.+ +.+|+++. +|.++++|.++ |+.
T Consensus 112 ~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~--~~v~vg~~~~~~~~~~~~g~v~alD~~T--G~~ 187 (488)
T cd00216 112 KVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVK--KLVIIGSSGAEFFACGVRGALRAYDVET--GKL 187 (488)
T ss_pred eEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEEC--CEEEEeccccccccCCCCcEEEEEECCC--Cce
Confidence 899999999999999999999999988765 578888876 88999864 57899999998 999
Q ss_pred eeEeecCCc---------------------ceeeeeeeeCCCEEEEEeecC------------------cEEEEC-CCCC
Q 002615 708 LWLHELEVP---------------------AFASLCITSANRHVICCLVDG------------------HVVALD-SSGS 747 (900)
Q Consensus 708 ~w~~~~~~~---------------------~~~s~~~~~~~~~i~~~~~~g------------------~v~~~d-~~G~ 747 (900)
+|+++...+ ...++.+...++.+|+++.++ .++++| .+|+
T Consensus 188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~ 267 (488)
T cd00216 188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK 267 (488)
T ss_pred eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence 999876421 112334444578999998665 799999 9999
Q ss_pred EEeeecCCCc------eecccccccc--CCC----eEEEEeeCCeEEEEeCCCCceeeEEecCC-ceecccccccccccc
Q 002615 748 IIWRCRTGGP------IFAGPCTSFA--LPS----QVLICSRNGSIYSFEQESGNLLWEYSVGD-PITASAYIDEHLQLK 814 (900)
Q Consensus 748 ~~w~~~~~~~------~~~~~~~~~~--~~~----~l~~g~~dg~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~~~~~~ 814 (900)
++|++....+ ..+.|.+... .++ .+++++.+|.++++|.++|+++|+++... .....
T Consensus 268 ~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~---------- 337 (488)
T cd00216 268 VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYD---------- 337 (488)
T ss_pred EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeeccccccC----------
Confidence 9999875422 1122222111 122 48899999999999999999999987541 11111
Q ss_pred cccccCCCeEEEEE------------------cCCCcEEEEEeecCcccccccccccceeeeeeeccC---------Ccc
Q 002615 815 LESCLSIDRLVCIC------------------TSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQ---------GDI 867 (900)
Q Consensus 815 ~~~~~~~~~~l~~g------------------~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~ 867 (900)
.+.+|++ ..+|.|+++|..+| +.+|+.... +..
T Consensus 338 -------~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG-------------~~~W~~~~~~~~~~~~~g~~~ 397 (488)
T cd00216 338 -------PGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTG-------------KVVWEKREGTIRDSWNIGFPH 397 (488)
T ss_pred -------CceEEEccccccccCcccccCCCCCCCceEEEEEeCCCC-------------cEeeEeeCCccccccccCCcc
Confidence 2344443 35689999999987 455555544 233
Q ss_pred cc-CceeeCCEEEEeeeCCeEEEEEcccccccc
Q 002615 868 FS-SPVMIGGRVFVGCRDDYIYCIALETQHLEE 899 (900)
Q Consensus 868 ~s-s~~~~~~~l~vg~~dg~l~~ld~~tg~~~~ 899 (900)
.. ++++.++.||+|+.+|.||++|.+||++..
T Consensus 398 ~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW 430 (488)
T cd00216 398 WGGSLATAGNLVFAGAADGYFRAFDATTGKELW 430 (488)
T ss_pred cCcceEecCCeEEEECCCCeEEEEECCCCceee
Confidence 33 456788999999999999999999998753
No 131
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.93 E-value=1.1e-23 Score=235.53 Aligned_cols=319 Identities=18% Similarity=0.302 Sum_probs=227.8
Q ss_pred cccccccccccccc--ccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCc--eee---c----eeEecCC
Q 002615 531 GFIQELWKVHMESC--VDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR--IEC---S----AAVLADF 599 (900)
Q Consensus 531 ~~~~~~W~~~~~~~--v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~--~~~---~----~~~~~~~ 599 (900)
..+++.|+++++.. +.++|++ .++.||+++.++.|+++|+.||+++|++..... ... + -.+.-.+
T Consensus 45 ~~L~~~W~~~~g~~~g~~stPvv----~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~ 120 (527)
T TIGR03075 45 KKLQPAWTFSLGKLRGQESQPLV----VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYD 120 (527)
T ss_pred ccceEEEEEECCCCCCcccCCEE----ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEEC
Confidence 45778899999754 6789998 488999999999999999999999999876431 110 0 0011234
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecCC-----ceeeeeeEeCCCCEEEEecC------CCeEEEEECCCCeEEEeec
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTCG-----EVKCQPVVDAPRQLIWCGSH------DHNLYALDFRNYRCVYKLP 668 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~~~~~i~~gs~------dg~l~~~d~~~g~~~w~~~ 668 (900)
+.||+++.++.|+++|.+||+++|++.... .+.++|++.+ +.|++++. +|.|+++|.++|+.+|++.
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~--g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVK--GKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEEC--CEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 589999999999999999999999987642 2456677764 67888753 6899999999999999865
Q ss_pred c--------------------------------CCccccCceeeccCCEEEEEeCC-----C-----------cEEEEEc
Q 002615 669 C--------------------------------GGSIFGSPAIDEVHDVLYVASTS-----G-----------RLTAISV 700 (900)
Q Consensus 669 ~--------------------------------~~~~~~~~~~~~~~~~l~v~t~~-----g-----------~l~~~~~ 700 (900)
. ++.++..+.++++.+.||+++.+ + .|.++|+
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~ 278 (527)
T TIGR03075 199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP 278 (527)
T ss_pred CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence 4 12456677888888999999833 2 6889999
Q ss_pred CCCCceeeeEeecCCcce------eeeeee---eCCC---EEEEEeecCcEEEEC-CCCCEEeee----------cCC--
Q 002615 701 KALPFHTLWLHELEVPAF------ASLCIT---SANR---HVICCLVDGHVVALD-SSGSIIWRC----------RTG-- 755 (900)
Q Consensus 701 ~~~~g~~~w~~~~~~~~~------~s~~~~---~~~~---~i~~~~~~g~v~~~d-~~G~~~w~~----------~~~-- 755 (900)
++ |+..|.++...... ..+.+. .+++ .+..++.+|.++++| .+|+.+|.. ...
T Consensus 279 ~T--G~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~ 356 (527)
T TIGR03075 279 DT--GKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLK 356 (527)
T ss_pred cc--CCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCC
Confidence 98 99999987643211 222222 1333 466788999999999 899987321 100
Q ss_pred --Ccee----------------cccc---------cccc-CCCeEEEEee------------------------------
Q 002615 756 --GPIF----------------AGPC---------TSFA-LPSQVLICSR------------------------------ 777 (900)
Q Consensus 756 --~~~~----------------~~~~---------~~~~-~~~~l~~g~~------------------------------ 777 (900)
.++. ..|. ...+ ..+.+|+.+.
T Consensus 357 ~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ 436 (527)
T TIGR03075 357 TGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPP 436 (527)
T ss_pred CCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCC
Confidence 0000 0000 0000 1223333322
Q ss_pred ---CCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccc
Q 002615 778 ---NGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHM 854 (900)
Q Consensus 778 ---dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~ 854 (900)
.|.|.++|+.+|+++|+++...+....+... .++++++++.+|.++++|.++|
T Consensus 437 ~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t------------~g~lvf~g~~~G~l~a~D~~TG------------ 492 (527)
T TIGR03075 437 DDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLAT------------AGDLVFYGTLEGYFKAFDAKTG------------ 492 (527)
T ss_pred CCCceeEEEEeCCCCceeeEecCCCCCCCcceEE------------CCcEEEEECCCCeEEEEECCCC------------
Confidence 3579999999999999988765544443332 2778999999999999999998
Q ss_pred eeeeeeeccCCccccCcee--eCCEEEEee
Q 002615 855 VQEFAKLELQGDIFSSPVM--IGGRVFVGC 882 (900)
Q Consensus 855 ~~~~~~~~l~~~~~ss~~~--~~~~l~vg~ 882 (900)
+.+|++++++.+..+|+. .++++|+..
T Consensus 493 -e~lw~~~~g~~~~a~P~ty~~~G~qYv~~ 521 (527)
T TIGR03075 493 -EELWKFKTGSGIVGPPVTYEQDGKQYVAV 521 (527)
T ss_pred -CEeEEEeCCCCceecCEEEEeCCEEEEEE
Confidence 778888999989999987 567776653
No 132
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=9.5e-23 Score=189.86 Aligned_cols=286 Identities=18% Similarity=0.296 Sum_probs=233.6
Q ss_pred cccccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEE
Q 002615 534 QELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYF 613 (900)
Q Consensus 534 ~~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~ 613 (900)
.+.|+..++..+.++|.++ ++.|.+|..+|.+|.++.+||+..|.+...+.+.+.+....+++.||.|+.|+++|+
T Consensus 44 ~~~We~ilg~RiE~sa~vv----gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~ya 119 (354)
T KOG4649|consen 44 NLIWEAILGVRIECSAIVV----GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYA 119 (354)
T ss_pred cEEeehhhCceeeeeeEEE----CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEE
Confidence 4679999999999999985 778999999999999999999999999998888889999999999999999999999
Q ss_pred EECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC--eEEEeeccCCccccCceeeccCCEEEEEeC
Q 002615 614 LDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY--RCVYKLPCGGSIFGSPAIDEVHDVLYVAST 691 (900)
Q Consensus 614 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g--~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~ 691 (900)
+|..+-..+|+.+.++.+..+|++++..+.+|+++..|.+.+.+++++ ..+|.+...++++++|..-. ..+.+++-
T Consensus 120 lD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splcv~--~sv~i~~V 197 (354)
T KOG4649|consen 120 LDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLCVG--SSVIITTV 197 (354)
T ss_pred ecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCCccccCceecc--ceEEEEEe
Confidence 999999999999999999999999988899999999999999999988 89999999999999988765 78899999
Q ss_pred CCcEEEEEcCCCCceeeeEeecCCcceeeeeee-eCCCEEEEEeecCcEEEECCCCCEEeeecCCC--ceeccccccc--
Q 002615 692 SGRLTAISVKALPFHTLWLHELEVPAFASLCIT-SANRHVICCLVDGHVVALDSSGSIIWRCRTGG--PIFAGPCTSF-- 766 (900)
Q Consensus 692 ~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~-~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~--~~~~~~~~~~-- 766 (900)
+|.+.+++.. |+++|++..+.+++..++.. +....++.+..+-..+.....|.++|..+.+- .++..|-..+
T Consensus 198 dG~l~~f~~s---G~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~l~F~~ 274 (354)
T KOG4649|consen 198 DGVLTSFDES---GRQVWRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPKLRFDL 274 (354)
T ss_pred ccEEEEEcCC---CcEEEeecCCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCcccceec
Confidence 9999999833 99999999999999888765 45567777765544444555688999877542 1222221111
Q ss_pred -----cCCCeEEEEeeCCeEEEE---------eCCCCceee--EEecCCceecccccccccccccccccCCCeEEEEEcC
Q 002615 767 -----ALPSQVLICSRNGSIYSF---------EQESGNLLW--EYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTS 830 (900)
Q Consensus 767 -----~~~~~l~~g~~dg~l~~~---------d~~tG~~~w--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 830 (900)
..+..+-..+.||.+..+ +...|++.- .+++.+.+.++|.+- ++.+++|+.
T Consensus 275 h~~~~S~~~ll~~~s~dgkv~il~~~~sl~~~~s~~g~lq~~~~~el~~eIFsSPvii-------------~grl~igcR 341 (354)
T KOG4649|consen 275 HSPGISYPKLLRRSSGDGKVMILMTSKSLAEISSNGGELQNLEAIELSNEIFSSPVII-------------DGRLLIGCR 341 (354)
T ss_pred cCCCCcchhhhhhhcCCCcEEEEEecccccccccCCCccceEEEeecCcccccCCeEE-------------ccEEEEEEc
Confidence 112234455677777777 767777754 346677777766543 678999999
Q ss_pred CCcEEEEEeec
Q 002615 831 SGSIHILRVNL 841 (900)
Q Consensus 831 ~G~v~~~d~~~ 841 (900)
|..|++||..+
T Consensus 342 DdYv~cldl~~ 352 (354)
T KOG4649|consen 342 DDYVRCLDLDT 352 (354)
T ss_pred cCeEEEEeccc
Confidence 99999999874
No 133
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.89 E-value=1.6e-20 Score=214.91 Aligned_cols=214 Identities=19% Similarity=0.289 Sum_probs=160.5
Q ss_pred ccccccccccccc----------cccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeec--------
Q 002615 531 GFIQELWKVHMES----------CVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECS-------- 592 (900)
Q Consensus 531 ~~~~~~W~~~~~~----------~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~-------- 592 (900)
..+++.|+++++. ...++|++ .++.||+++.++.|+++|+.||+++|++.........
T Consensus 162 ~~L~~aWt~~tGd~~~~~~~~~~~~e~TPlv----vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRG 237 (764)
T TIGR03074 162 GNLKVAWTYHTGDLKTPDDPGEATFQATPLK----VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRG 237 (764)
T ss_pred cCceEEEEEECCCccccccccccccccCCEE----ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 4688899999873 34678998 4899999999999999999999999998765432110
Q ss_pred ee----------------EecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce----------------eeeeeEeCC
Q 002615 593 AA----------------VLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV----------------KCQPVVDAP 640 (900)
Q Consensus 593 ~~----------------~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~----------------~~~~~~~~~ 640 (900)
.. ...++++||+++.|+.|+++|.+||+.+|.|..++.+ .+.|++.+
T Consensus 238 vay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~- 316 (764)
T TIGR03074 238 VSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAG- 316 (764)
T ss_pred eEEecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEEC-
Confidence 00 1124568999999999999999999999998654432 35566664
Q ss_pred CCEEEEecC----------CCeEEEEECCCCeEEEeeccC------------------CccccCceeeccCCEEEEEeC-
Q 002615 641 RQLIWCGSH----------DHNLYALDFRNYRCVYKLPCG------------------GSIFGSPAIDEVHDVLYVAST- 691 (900)
Q Consensus 641 ~~~i~~gs~----------dg~l~~~d~~~g~~~w~~~~~------------------~~~~~~~~~~~~~~~l~v~t~- 691 (900)
+.|++|+. +|.|++||.+||+.+|+++.. ++.+....++.+.+.+|+++.
T Consensus 317 -g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn 395 (764)
T TIGR03074 317 -TTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGN 395 (764)
T ss_pred -CEEEEEecccccccccCCCcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCC
Confidence 67888853 588999999999999998642 233456677777788888652
Q ss_pred -----------------CCcEEEEEcCCCCceeeeEeecCCc-c-----eeeeeee---eCCC----EEEEEeecCcEEE
Q 002615 692 -----------------SGRLTAISVKALPFHTLWLHELEVP-A-----FASLCIT---SANR----HVICCLVDGHVVA 741 (900)
Q Consensus 692 -----------------~g~l~~~~~~~~~g~~~w~~~~~~~-~-----~~s~~~~---~~~~----~i~~~~~~g~v~~ 741 (900)
.+.|.++|+++ |+.+|+++.... . -..+.+. ..++ .++.++.+|.+++
T Consensus 396 ~~pd~~g~~r~~~~n~y~~slvALD~~T--Gk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~v 473 (764)
T TIGR03074 396 QTPDQWGGDRTPADEKYSSSLVALDATT--GKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYV 473 (764)
T ss_pred ccccccCCccccCcccccceEEEEeCCC--CceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEE
Confidence 35688999998 999999876321 1 1122221 1144 7899999999999
Q ss_pred EC-CCCCEEeee
Q 002615 742 LD-SSGSIIWRC 752 (900)
Q Consensus 742 ~d-~~G~~~w~~ 752 (900)
+| .+|+.+|..
T Consensus 474 lDr~tG~~l~~~ 485 (764)
T TIGR03074 474 LDRRTGEPIVPV 485 (764)
T ss_pred EECCCCCEEeec
Confidence 99 899999964
No 134
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.87 E-value=3.8e-20 Score=206.13 Aligned_cols=218 Identities=16% Similarity=0.212 Sum_probs=157.2
Q ss_pred CCCCCCcEEEEccCcchHhHHHH-HHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPLHGEELLLFKTSISFIDHLQE-FLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+++++|+++.+.|+.++.+... .+.++..|++++... .....++.|+++++|++.++|+.+..+++.+....
T Consensus 125 ~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g 198 (445)
T TIGR03335 125 QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEG 198 (445)
T ss_pred cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcC
Confidence 48999999999999998877655 455677888876442 12346788999999999999999888877655443
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
......+||.+++|||++++++.+.+.+.| ++++++.||+||++. +. .|... .....+.+.+.++
T Consensus 199 ~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE~~~-~~--~c~~~-----------~g~h~~~d~~~vE 263 (445)
T TIGR03335 199 IDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTEGTM-CG--ECQAV-----------AGLHVPEDLVHLD 263 (445)
T ss_pred CCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhhhhh-eE--EecCC-----------CCccccCCceEEE
Confidence 212246899999999999999999998888 799999999999862 21 22110 0112233457889
Q ss_pred EecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEcc-C----C--
Q 002615 164 LVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQ-S----G-- 232 (900)
Q Consensus 164 i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~-~----G-- 232 (900)
|+|+++ ++++.|||++.... +........++ -|+|||++++.. + |
T Consensus 264 IvDp~~~~~vp~Ge~GELvvT~L~------~~~~r~~~Pli------------------RYrtgD~~~~~~~~~C~CGr~ 319 (445)
T TIGR03335 264 VYDPRHQRFLPDGECGRIVLTTLL------KPGERCGSLLI------------------NYDTEDTTVVISRDRCPCGRT 319 (445)
T ss_pred EEcCCCCCCCcCCCceEEEEEecC------CCCccCCceEE------------------EeecCceEEEecCCCCCCCCC
Confidence 998765 34677999997642 10000111122 299999999632 2 3
Q ss_pred --cEEEEcccCCcEEECceeeChHHHHHHHhCC---CCee
Q 002615 233 --DLVFLGRKDRTIKINGQRMALEEIEHTLRGH---PDVV 267 (900)
Q Consensus 233 --~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~---~~v~ 267 (900)
++..+||.||+++++|.+|+|.+||++|.++ +++.
T Consensus 320 ~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 320 HMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLT 359 (445)
T ss_pred cceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCC
Confidence 2445799999999999999999999999995 5554
No 135
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.87 E-value=8.3e-20 Score=187.46 Aligned_cols=222 Identities=26% Similarity=0.455 Sum_probs=167.8
Q ss_pred CCeEEEEECCCCcEEEEEecCCceeece-eEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 566 SHKFICADAKRSSVLWEIKLEGRIECSA-AVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 566 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~-~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
+|.|.++|+.+|+.+|+..+........ ....+++.+|+++.++.|++||+.||+++|++...+.+...+.... +.+
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~--~~v 79 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDG--GRV 79 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEET--TEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecc--ccc
Confidence 5789999999999999998743222112 1333557899999999999999999999999998777666665553 788
Q ss_pred EEecCCCeEEEEECCCCeEEEee-ccCC---ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCccee-
Q 002615 645 WCGSHDHNLYALDFRNYRCVYKL-PCGG---SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFA- 719 (900)
Q Consensus 645 ~~gs~dg~l~~~d~~~g~~~w~~-~~~~---~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~- 719 (900)
|+++.++.++++|.++|+.+|+. .... .....+...-.++.+++++.+|.++++|+++ |+.+|++....+...
T Consensus 80 ~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--G~~~w~~~~~~~~~~~ 157 (238)
T PF13360_consen 80 YVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKT--GKLLWKYPVGEPRGSS 157 (238)
T ss_dssp EEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTT--TEEEEEEESSTT-SS-
T ss_pred ccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCC--CcEEEEeecCCCCCCc
Confidence 99888889999999999999995 3321 1222222222258899999999999999998 999999987553311
Q ss_pred --------eeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc
Q 002615 720 --------SLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN 790 (900)
Q Consensus 720 --------s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~ 790 (900)
...+...++.+|+++.++.++++| .+|+.+|+.. .......+ ...++.+|+++.++.|+++|.+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~w~~~-~~~~~~~~---~~~~~~l~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 158 PISSFSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKLWSKP-ISGIYSLP---SVDGGTLYVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp -EEEETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEEEEEC-SS-ECECE---ECCCTEEEEEETTTEEEEEETTTTE
T ss_pred ceeeecccccceEEECCEEEEEcCCCeEEEEECCCCCEEEEec-CCCccCCc---eeeCCEEEEEeCCCEEEEEECCCCC
Confidence 123333456999999899888889 8999889766 33333323 4567899999999999999999999
Q ss_pred eeeEE
Q 002615 791 LLWEY 795 (900)
Q Consensus 791 ~~w~~ 795 (900)
.+|++
T Consensus 234 ~~W~~ 238 (238)
T PF13360_consen 234 VVWQQ 238 (238)
T ss_dssp EEEEE
T ss_pred EEeEC
Confidence 99974
No 136
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.86 E-value=5.1e-19 Score=198.17 Aligned_cols=307 Identities=17% Similarity=0.196 Sum_probs=203.5
Q ss_pred EECCCCcEEEEEecCCc--eeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCc--ee---e------eeeEe
Q 002615 572 ADAKRSSVLWEIKLEGR--IECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGE--VK---C------QPVVD 638 (900)
Q Consensus 572 ~d~~tG~~~w~~~~~~~--~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~--~~---~------~~~~~ 638 (900)
-|..+.++.|++..+.. +.+++++. ++.||+++.++.|+++|.+||+++|++..... .. + .+.+.
T Consensus 42 ~nv~~L~~~W~~~~g~~~g~~stPvv~--~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~ 119 (527)
T TIGR03075 42 ENVKKLQPAWTFSLGKLRGQESQPLVV--DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY 119 (527)
T ss_pred hhhccceEEEEEECCCCCCcccCCEEE--CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE
Confidence 34556778898887642 45667765 35899999999999999999999999876432 11 1 12232
Q ss_pred CCCCEEEEecCCCeEEEEECCCCeEEEeeccCC-----ccccCceeeccCCEEEEEeC------CCcEEEEEcCCCCcee
Q 002615 639 APRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG-----SIFGSPAIDEVHDVLYVAST------SGRLTAISVKALPFHT 707 (900)
Q Consensus 639 ~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~-----~~~~~~~~~~~~~~l~v~t~------~g~l~~~~~~~~~g~~ 707 (900)
++.||+++.++.|+++|.++|+.+|++.... .+.++|++.+ +.||+++. +|.|+++|.++ |+.
T Consensus 120 --~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~--g~Vivg~~~~~~~~~G~v~AlD~~T--G~~ 193 (527)
T TIGR03075 120 --DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVK--GKVITGISGGEFGVRGYVTAYDAKT--GKL 193 (527)
T ss_pred --CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEEC--CEEEEeecccccCCCcEEEEEECCC--Cce
Confidence 4689999999999999999999999987632 3567888876 88999874 68899999998 999
Q ss_pred eeEeecCCcc--------------------------------eeeeeeeeCCCEEEEEeec-----C-----------cE
Q 002615 708 LWLHELEVPA--------------------------------FASLCITSANRHVICCLVD-----G-----------HV 739 (900)
Q Consensus 708 ~w~~~~~~~~--------------------------------~~s~~~~~~~~~i~~~~~~-----g-----------~v 739 (900)
+|++....+. -..+.+....+.+|+++.+ + .|
T Consensus 194 lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~ 273 (527)
T TIGR03075 194 VWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSI 273 (527)
T ss_pred eEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeE
Confidence 9997653211 1223455557889998732 2 68
Q ss_pred EEEC-CCCCEEeeecCCCc------eecccccccc-CCC----eEEEEeeCCeEEEEeCCCCceeeEEecCC--c----e
Q 002615 740 VALD-SSGSIIWRCRTGGP------IFAGPCTSFA-LPS----QVLICSRNGSIYSFEQESGNLLWEYSVGD--P----I 801 (900)
Q Consensus 740 ~~~d-~~G~~~w~~~~~~~------~~~~~~~~~~-~~~----~l~~g~~dg~l~~~d~~tG~~~w~~~~~~--~----~ 801 (900)
.++| .+|++.|.++.-.. ....+.+... .++ .+..++.+|.+|++|..||+++|..+... . +
T Consensus 274 vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~ 353 (527)
T TIGR03075 274 VARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGV 353 (527)
T ss_pred EEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCccccccc
Confidence 9999 99999999874221 1122222211 233 36678999999999999999974211100 0 0
Q ss_pred e---cccccc---------------------cccccccccccCCCeEEEEEcC---------------------------
Q 002615 802 T---ASAYID---------------------EHLQLKLESCLSIDRLVCICTS--------------------------- 830 (900)
Q Consensus 802 ~---~~~~~~---------------------~~~~~~~~~~~~~~~~l~~g~~--------------------------- 830 (900)
. ..+... ...+....+.-+..+++|+.+.
T Consensus 354 ~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 433 (527)
T TIGR03075 354 DLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIK 433 (527)
T ss_pred CCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccC
Confidence 0 000000 0000000111112334444332
Q ss_pred ------CCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee-eCCEEEEeeeCCeEEEEEcccccccc
Q 002615 831 ------SGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM-IGGRVFVGCRDDYIYCIALETQHLEE 899 (900)
Q Consensus 831 ------~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~-~~~~l~vg~~dg~l~~ld~~tg~~~~ 899 (900)
.|.|..+|..+| +..|+.........+++. .++.+|+++.+|.++|||.+||+...
T Consensus 434 p~~~~~~g~l~AiD~~tG-------------k~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw 496 (527)
T TIGR03075 434 PPPDDHMGSLIAWDPITG-------------KIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELW 496 (527)
T ss_pred CCCCCCceeEEEEeCCCC-------------ceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeE
Confidence 245777777766 666766666666667655 56788888889999999999998643
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.84 E-value=7.2e-19 Score=183.93 Aligned_cols=284 Identities=18% Similarity=0.195 Sum_probs=198.7
Q ss_pred CCCCCCcEEEEccCcch-HhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhcc
Q 002615 5 YPLHGEELLLFKTSISF-IDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQH 83 (900)
Q Consensus 5 ~~~~~~d~~l~~~p~~~-~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~ 83 (900)
.+...+|++..+..+.. ..++....++--.|++++-.. ..+.+.-+++|+.+++|++.++|+.+..+++.+.+..
T Consensus 129 ~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~----~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G 204 (438)
T COG1541 129 AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS----GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEG 204 (438)
T ss_pred ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC----CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcC
Confidence 46788999887777553 344444555556677776554 3577889999999999999999999999999888775
Q ss_pred CCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEE
Q 002615 84 NMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV 163 (900)
Q Consensus 84 ~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 163 (900)
....-.+||.+++|+|++++++.+.+.+.| ++..++.||.||..+.. ...|.... ..-...++..++
T Consensus 205 ~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGltE~~g~g-~~eC~~~~-----------glhi~eD~~~~E 271 (438)
T COG1541 205 IDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGLTEGFGPG-AGECTERN-----------GLHIWEDHFIFE 271 (438)
T ss_pred CChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccccccccCCc-cccccccc-----------CCCcchhhceee
Confidence 434457999999999999999999999999 89999999999986653 33333211 112234567788
Q ss_pred EecCCC----CCCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccC----Cc--
Q 002615 164 LVESDT----VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQS----GD-- 233 (900)
Q Consensus 164 i~d~~~----~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~----G~-- 233 (900)
|+|++. +.++.|||+++.-. + ....+ --|+|||+++..++ |+
T Consensus 272 i~dP~t~e~l~dge~GelV~T~L~-------~---~~~Pl------------------IRYrtgDit~i~~~~C~cGr~~ 323 (438)
T COG1541 272 IVDPETGEQLPDGERGELVITTLT-------K---EGMPL------------------IRYRTGDITVILSDPCGCGRTH 323 (438)
T ss_pred eecCCcCccCCCCCeeEEEEEecc-------c---cCcce------------------EEEEcCCeeEecccCCCCCCcc
Confidence 898765 34556999887532 1 11222 23999999998763 43
Q ss_pred ---EEEEcccCCcEEECceeeChHHHHHHHhCCCCee-EEEEEEeecCCceEEEEEEEEecCCCCchHHHH---HHHHHH
Q 002615 234 ---LVFLGRKDRTIKINGQRMALEEIEHTLRGHPDVV-DTAVVSHKHQGELVILVAFIVLKEKKTSSEIFL---SSIKSW 306 (900)
Q Consensus 234 ---l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~---~~l~~~ 306 (900)
-.+.||.||+++++|.+|+|..||.+|.+.+.+. +-.++... .+....+.+-|+.+++........ .++...
T Consensus 324 ~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~ 402 (438)
T COG1541 324 RRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELENEAEELEDERRLAKKLIKN 402 (438)
T ss_pred ccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecCcccchHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999998 55555544 333445677777765422222111 244444
Q ss_pred HHhhCCCCccCCEEEEcCCcCCCCCCCcch
Q 002615 307 VSSKLPLAMIPNRFVFMDSLPMTSSGKVDY 336 (900)
Q Consensus 307 l~~~l~~~~~P~~~~~v~~lP~t~~GKidr 336 (900)
+...+.. .+--.++.+.++|+|.. |..|
T Consensus 403 ~~~~~~~-~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 403 IKSELGV-RVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred HHhhcCC-ceEEEEEeccceecccC-ceeE
Confidence 4444332 12234555678999876 5443
No 138
>PTZ00297 pantothenate kinase; Provisional
Probab=99.82 E-value=2.6e-19 Score=217.89 Aligned_cols=283 Identities=13% Similarity=0.093 Sum_probs=203.7
Q ss_pred CCCCCcEEEEccCcchHhHHHHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC-
Q 002615 6 PLHGEELLLFKTSISFIDHLQEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN- 84 (900)
Q Consensus 6 ~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~- 84 (900)
.+.++|+++..+|++|.++....+.+++.|+++... ++..+++.|+++++|++.++|.+++.+.........
T Consensus 641 ~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~~-------d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~ 713 (1452)
T PTZ00297 641 SSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVATV-------DAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANER 713 (1452)
T ss_pred CCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEeC-------CHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhh
Confidence 456789999999999999976778889999998643 567899999999999999999999987643321100
Q ss_pred -----------------------CC----------------CCCCcCEEEEecc--CCChhhHHHHHhhCCCceEEeecC
Q 002615 85 -----------------------MH----------------VPSSLKLLVLSGE--VLPLSMWDIISKLFPNISILNLYG 123 (900)
Q Consensus 85 -----------------------~~----------------~~~~lr~v~~gGe--~l~~~~~~~~~~~~~~~~l~~~YG 123 (900)
.. .-..+|.+++||. +++..+.. +++++..||
T Consensus 714 ~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~g~g 786 (1452)
T PTZ00297 714 YSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCYVPC 786 (1452)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEEecc
Confidence 00 0146999999873 55543322 577889999
Q ss_pred ccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCC--CCCCccEEEEccccccccccCCCCCCccchhc
Q 002615 124 STEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDT--VKPDEGEIYAGGLCLSNGYFSESTFMPSEYVK 201 (900)
Q Consensus 124 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~--~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~ 201 (900)
+||+. +..... .....|.|+|+++++|.+.+. ..+..|||+++ |.++|+.|.+.+
T Consensus 787 lTE~~---~~~~~~-----------~~~~~G~PlpgvEvKI~~~~E~~~~~~~GEIlvr-------~~kdpe~T~e~~-- 843 (1452)
T PTZ00297 787 LREVF---FLPSEG-----------VFCVDGTPAPSLQVDLEPFDEPSDGAGIGQLVLA-------KKGEPRRTLPIA-- 843 (1452)
T ss_pred eEEee---eecCCC-----------CcccCCeecCceEEEEcccccccCCCCCCeEEEE-------ECCChHHHHHhh--
Confidence 99953 221111 111239999999999986422 23346999995 457888776521
Q ss_pred cCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcEEE-CceeeChHHHHHHHhCCCCeeEEEEEEeecCCce
Q 002615 202 LHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTIKI-NGQRMALEEIEHTLRGHPDVVDTAVVSHKHQGEL 280 (900)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~-~G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 280 (900)
++| ++||.|.|+||++|+||. +|++|.|+.||..+..+|.|.+++|++....
T Consensus 844 ---------------~gW---------~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k--- 896 (1452)
T PTZ00297 844 ---------------AQW---------KRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR--- 896 (1452)
T ss_pred ---------------CcC---------ccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC---
Confidence 234 479999999999999999 9999999999999999999999999987654
Q ss_pred EEEEEEEEecCCCCc--------------------hHHHHH----HHHHHH---H--hhCCCCccCCEEEEcC-Cc----
Q 002615 281 VILVAFIVLKEKKTS--------------------SEIFLS----SIKSWV---S--SKLPLAMIPNRFVFMD-SL---- 326 (900)
Q Consensus 281 ~~l~~~v~~~~~~~~--------------------~~~~~~----~l~~~l---~--~~l~~~~~P~~~~~v~-~l---- 326 (900)
.++|+|+++..... .+.+.+ .+++.+ . ..+..+.+++.|.+++ +|
T Consensus 897 -~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~en 975 (1452)
T PTZ00297 897 -PIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHS 975 (1452)
T ss_pred -ceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCC
Confidence 37888887632110 111111 222222 1 2267788888877754 45
Q ss_pred -CCCCCCCcchhhhccccccccccccCc
Q 002615 327 -PMTSSGKVDYASLSASTSFTISAQHDA 353 (900)
Q Consensus 327 -P~t~~GKidr~~L~~~~~~~~~~~~~~ 353 (900)
-+||+.|+.|+.+.+.|+..++..|..
T Consensus 976 GlLTPTlKlKR~~I~~kY~~~Ie~LY~~ 1003 (1452)
T PTZ00297 976 TFLTPYGKIRRDAVHSYFSSVIERFYSD 1003 (1452)
T ss_pred CcCChhhhhhHHHHHHHHHHHHHHHhcc
Confidence 489999999999999998887776653
No 139
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=9.5e-20 Score=192.11 Aligned_cols=119 Identities=21% Similarity=0.243 Sum_probs=107.4
Q ss_pred CcceEecCceEEE-ccCCcEEEEcccCCcEEECc---eeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecC
Q 002615 216 SQTYFRTGDFARR-IQSGDLVFLGRKDRTIKING---QRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKE 291 (900)
Q Consensus 216 ~~~~~~TGDl~~~-~~~G~l~~~GR~dd~ik~~G---~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~ 291 (900)
.++||+|||+|++ |++|+++|.||.| +| ++|+|. ||++|.+||+|.+|+|++.+++..++.++|||++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 5789999999998 6999999999998 88 799999 999999999999999999999988899999998763
Q ss_pred CCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCCcCCCCCCCcchhhhccccccc
Q 002615 292 KKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDSLPMTSSGKVDYASLSASTSFT 346 (900)
Q Consensus 292 ~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~lP~t~~GKidr~~L~~~~~~~ 346 (900)
. ...++|+++++++||. ++|..++++++||+|++|||+|++|+.+....
T Consensus 281 ~-----~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~ 329 (365)
T PRK09188 281 P-----ADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQ 329 (365)
T ss_pred C-----CCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcc
Confidence 2 1236899999999999 99999999999999999999999998875433
No 140
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.82 E-value=1.7e-17 Score=180.99 Aligned_cols=312 Identities=22% Similarity=0.338 Sum_probs=211.0
Q ss_pred EEEEecCC-CeEEEEECCCCcEEEEEecCC---ceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCC--cee
Q 002615 559 YLFVGSHS-HKFICADAKRSSVLWEIKLEG---RIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCG--EVK 632 (900)
Q Consensus 559 ~v~igs~~-g~l~~~d~~tG~~~w~~~~~~---~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~--~~~ 632 (900)
..+..... ......+..+|+.+|...... .....+.....++.+|+++.+|.|+++|+++|+.+|+..... ...
T Consensus 24 ~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~~~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~ 103 (370)
T COG1520 24 TDYLVAVGADLVAVANNTSGTLLWSVSLGSGGGGIYAGPAPADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQL 103 (370)
T ss_pred ceEEeeccCCceEEEcccCcceeeeeecccCccceEeccccEeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceec
Confidence 44544322 335556667799999865332 334444223344689999999999999999999999887764 455
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC-ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEe
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG-SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLH 711 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~-~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~ 711 (900)
..+++.. ++.||+++.++.+||+|..+|+.+|++...+ ..+..+.+.. ++.+|+.+.+|.++++|.++ |+.+|.+
T Consensus 104 ~~~~~~~-~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~-~~~v~~~s~~g~~~al~~~t--G~~~W~~ 179 (370)
T COG1520 104 SGPILGS-DGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVG-DGTVYVGTDDGHLYALNADT--GTLKWTY 179 (370)
T ss_pred cCceEEe-CCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEc-CcEEEEecCCCeEEEEEccC--CcEEEEE
Confidence 5555554 6889999999999999999999999999988 3333343333 48899998889999999988 9999998
Q ss_pred ecCCc--ceeeeeeeeCCCEEEEEee--cCcEEEEC-CCCCEEeeecCCCceec-----ccc---ccccCCCeEEEEeeC
Q 002615 712 ELEVP--AFASLCITSANRHVICCLV--DGHVVALD-SSGSIIWRCRTGGPIFA-----GPC---TSFALPSQVLICSRN 778 (900)
Q Consensus 712 ~~~~~--~~~s~~~~~~~~~i~~~~~--~g~v~~~d-~~G~~~w~~~~~~~~~~-----~~~---~~~~~~~~l~~g~~d 778 (900)
+...+ ......+....+.+|+++. ++.++++| .+|...|+.+....+-. .+. -....++.++.++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~ 259 (370)
T COG1520 180 ETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYG 259 (370)
T ss_pred ecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecC
Confidence 77542 1111112256788999987 67899999 89999999542221111 111 123345677888999
Q ss_pred CeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCC------CcEEEEEeecCcccccccccc
Q 002615 779 GSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSS------GSIHILRVNLDVTGKENQSKD 852 (900)
Q Consensus 779 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~------G~v~~~d~~~~~~~~~~~~~~ 852 (900)
|.++|+|..+|+.+|+++.+..+...+.... .....++.+++.... +.+++++...+.
T Consensus 260 g~~~~l~~~~G~~~W~~~~~~~~~~~~~~~~-------~~~~~dG~v~~~~~~~~~~~~~~~~~~~~~~g~--------- 323 (370)
T COG1520 260 GKLLCLDADTGELIWSFPAGGSVQGSGLYTT-------PVAGADGKVYIGFTDNDGRGSGSLYALADVPGG--------- 323 (370)
T ss_pred CeEEEEEcCCCceEEEEecccEeccCCeeEE-------eecCCCccEEEEEeccccccccceEEEeccCCC---------
Confidence 9999999999999999988622222211110 001124555555432 335666653331
Q ss_pred cceeeeeeeccCC-ccccCceeeCCEEEEeeeCCe-EEEEEc
Q 002615 853 HMVQEFAKLELQG-DIFSSPVMIGGRVFVGCRDDY-IYCIAL 892 (900)
Q Consensus 853 ~~~~~~~~~~l~~-~~~ss~~~~~~~l~vg~~dg~-l~~ld~ 892 (900)
....|.+...+ .....++..++.+|.+..++. ||++..
T Consensus 324 --~~~~w~~~~~g~~~~~~~~~~~g~~y~~~~~~~~ly~~~~ 363 (370)
T COG1520 324 --TLLKWSYPVGGGYSLSTVAGSDGTLYFGGDDGRGLYAFRD 363 (370)
T ss_pred --eeEEEEEeCCCceecccceeccCeEEecccCCceEEEEcc
Confidence 11256666655 444567778999999999997 998854
No 141
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.82 E-value=1.1e-17 Score=182.37 Aligned_cols=285 Identities=25% Similarity=0.422 Sum_probs=205.8
Q ss_pred ccccccccccccc---ccccce-EEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCC--ceeeceeEecCCCEEEEE
Q 002615 532 FIQELWKVHMESC---VDASPL-VVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEG--RIECSAAVLADFSQVVVG 605 (900)
Q Consensus 532 ~~~~~W~~~~~~~---v~~sp~-v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~--~~~~~~~~~~~~~~i~vg 605 (900)
.-.++|.+.+.+. ..+.|. + ..++.+|+++.+|.|+++|+.+|+.+|+..+.. ....++....+ +.||++
T Consensus 42 ~g~~~W~~~~~~~~~~~~~~~~~~---~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~-G~i~~g 117 (370)
T COG1520 42 SGTLLWSVSLGSGGGGIYAGPAPA---DGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSD-GKIYVG 117 (370)
T ss_pred CcceeeeeecccCccceEeccccE---eeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeC-CeEEEe
Confidence 3456788665443 344552 3 279999999999999999999999999988774 44445555554 579999
Q ss_pred eeCCEEEEEECCCCcEEEEEecCC--ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC----CccccCcee
Q 002615 606 CYKGKIYFLDYLTGDIYWTFQTCG--EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG----GSIFGSPAI 679 (900)
Q Consensus 606 ~~dg~l~~~d~~tG~~~w~~~~~~--~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~----~~~~~~~~~ 679 (900)
+.+|.+|++|..+|+.+|++..++ .....+++. ++.+|.++.+++++++|..+|+.+|.+... ..+.+++.+
T Consensus 118 ~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~--~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~ 195 (370)
T COG1520 118 SWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVG--DGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAI 195 (370)
T ss_pred cccceEEEEECCCCcEEEEEecCCCeEEecCcEEc--CcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCcee
Confidence 999999999988999999999888 333344443 478999988899999999999999997663 344556664
Q ss_pred eccCCEEEEEeC--CCcEEEEEcCCCCceeeeEeecCCcc---------eeeeeeeeCCCEEEEEeecCcEEEEC-CCCC
Q 002615 680 DEVHDVLYVAST--SGRLTAISVKALPFHTLWLHELEVPA---------FASLCITSANRHVICCLVDGHVVALD-SSGS 747 (900)
Q Consensus 680 ~~~~~~l~v~t~--~g~l~~~~~~~~~g~~~w~~~~~~~~---------~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~ 747 (900)
. .+.+|+++. ++.++++|+.+ |..+|+.+..... .........++.++.+..++.++|++ .+|+
T Consensus 196 ~--~~~vy~~~~~~~~~~~a~~~~~--G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~ 271 (370)
T COG1520 196 A--SGTVYVGSDGYDGILYALNAED--GTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGE 271 (370)
T ss_pred e--cceEEEecCCCcceEEEEEccC--CcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCc
Confidence 4 489999988 77899999988 9999995432211 11112223355667788888899999 9999
Q ss_pred EEeeecCCCceeccccc---cccCCCeEEEEeeC------CeEEEEeCCCCce--eeEEecCCceecccccccccccccc
Q 002615 748 IIWRCRTGGPIFAGPCT---SFALPSQVLICSRN------GSIYSFEQESGNL--LWEYSVGDPITASAYIDEHLQLKLE 816 (900)
Q Consensus 748 ~~w~~~~~~~~~~~~~~---~~~~~~~l~~g~~d------g~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~~~~~ 816 (900)
++|+++....+.+.+.. ....++.+++.... +.+++++...|.. .|.+...+......
T Consensus 272 ~~W~~~~~~~~~~~~~~~~~~~~~dG~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~g~~~~~~----------- 340 (370)
T COG1520 272 LIWSFPAGGSVQGSGLYTTPVAGADGKVYIGFTDNDGRGSGSLYALADVPGGTLLKWSYPVGGGYSLST----------- 340 (370)
T ss_pred eEEEEecccEeccCCeeEEeecCCCccEEEEEeccccccccceEEEeccCCCeeEEEEEeCCCceeccc-----------
Confidence 99999875222222211 12247788877543 4578999877877 89988776322222
Q ss_pred cccCCCeEEEEEcCCCc-EEEEE
Q 002615 817 SCLSIDRLVCICTSSGS-IHILR 838 (900)
Q Consensus 817 ~~~~~~~~l~~g~~~G~-v~~~d 838 (900)
...+++.+|.+..++. ||.+.
T Consensus 341 -~~~~~g~~y~~~~~~~~ly~~~ 362 (370)
T COG1520 341 -VAGSDGTLYFGGDDGRGLYAFR 362 (370)
T ss_pred -ceeccCeEEecccCCceEEEEc
Confidence 2334889999999997 77764
No 142
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.81 E-value=1.2e-17 Score=171.37 Aligned_cols=217 Identities=23% Similarity=0.390 Sum_probs=162.0
Q ss_pred CCEEEEEECCCCcEEEEEecCCceeeeee-EeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEE
Q 002615 608 KGKIYFLDYLTGDIYWTFQTCGEVKCQPV-VDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVL 686 (900)
Q Consensus 608 dg~l~~~d~~tG~~~w~~~~~~~~~~~~~-~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l 686 (900)
+|.|+++|+.+|+.+|+..........+. ....++.+|+++.++.|++||..+|+.+|++.+.+.+...|...+ +.+
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~--~~v 79 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDG--GRV 79 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEET--TEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecc--ccc
Confidence 68999999999999999987432222220 111358899999999999999999999999999777777776665 999
Q ss_pred EEEeCCCcEEEEEcCCCCceeeeEe-ecCCc---ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceecc
Q 002615 687 YVASTSGRLTAISVKALPFHTLWLH-ELEVP---AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAG 761 (900)
Q Consensus 687 ~v~t~~g~l~~~~~~~~~g~~~w~~-~~~~~---~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~ 761 (900)
|+++.++.++++|..+ |+.+|+. ....+ ......+...++.++++..++.++++| .+|+++|++....+....
T Consensus 80 ~v~~~~~~l~~~d~~t--G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 157 (238)
T PF13360_consen 80 YVGTSDGSLYALDAKT--GKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSS 157 (238)
T ss_dssp EEEETTSEEEEEETTT--SCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS-
T ss_pred ccccceeeeEecccCC--cceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCc
Confidence 9999889999999888 9999994 43321 223334444588999998899999999 999999999764432111
Q ss_pred c--------cccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCc
Q 002615 762 P--------CTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGS 833 (900)
Q Consensus 762 ~--------~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~ 833 (900)
+ ......++.+|+++.+|.+.++|.++|+.+|+.. .......+. ..++.+|+++.+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~w~~~-~~~~~~~~~-------------~~~~~l~~~~~~~~ 223 (238)
T PF13360_consen 158 PISSFSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKLWSKP-ISGIYSLPS-------------VDGGTLYVTSSDGR 223 (238)
T ss_dssp -EEEETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEEEEEC-SS-ECECEE-------------CCCTEEEEEETTTE
T ss_pred ceeeecccccceEEECCEEEEEcCCCeEEEEECCCCCEEEEec-CCCccCCce-------------eeCCEEEEEeCCCE
Confidence 0 1112235699999999988888999999999666 333332222 22788999889999
Q ss_pred EEEEEeecC
Q 002615 834 IHILRVNLD 842 (900)
Q Consensus 834 v~~~d~~~~ 842 (900)
|++||.++|
T Consensus 224 l~~~d~~tG 232 (238)
T PF13360_consen 224 LYALDLKTG 232 (238)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999999988
No 143
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.80 E-value=6.1e-17 Score=185.79 Aligned_cols=221 Identities=17% Similarity=0.228 Sum_probs=156.4
Q ss_pred EEEEECCCCcEEEEEecCC----------ceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee-----
Q 002615 569 FICADAKRSSVLWEIKLEG----------RIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC----- 633 (900)
Q Consensus 569 l~~~d~~tG~~~w~~~~~~----------~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~----- 633 (900)
|..-|..+.++.|.+..++ ..+.++++.. +.+|+++.++.|+++|.+||+++|+++.......
T Consensus 156 In~~NV~~L~~aWt~~tGd~~~~~~~~~~~~e~TPlvvg--g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~ 233 (764)
T TIGR03074 156 INPDNVGNLKVAWTYHTGDLKTPDDPGEATFQATPLKVG--DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQ 233 (764)
T ss_pred cCcccccCceEEEEEECCCccccccccccccccCCEEEC--CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccc
Confidence 3344455667788876653 2355666654 5899999999999999999999999987543211
Q ss_pred ----eeeEe---------------CCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc----------------cccCce
Q 002615 634 ----QPVVD---------------APRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS----------------IFGSPA 678 (900)
Q Consensus 634 ----~~~~~---------------~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~----------------~~~~~~ 678 (900)
..... ...+.||+++.|+.|+++|.+||+.+|.+..++. ..++|+
T Consensus 234 ~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~ 313 (764)
T TIGR03074 234 TCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPL 313 (764)
T ss_pred cccceEEecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCE
Confidence 00010 1346899999999999999999999998765332 356788
Q ss_pred eeccCCEEEEEeC----------CCcEEEEEcCCCCceeeeEeecCCcce------------------eeeeeeeCCCEE
Q 002615 679 IDEVHDVLYVAST----------SGRLTAISVKALPFHTLWLHELEVPAF------------------ASLCITSANRHV 730 (900)
Q Consensus 679 ~~~~~~~l~v~t~----------~g~l~~~~~~~~~g~~~w~~~~~~~~~------------------~s~~~~~~~~~i 730 (900)
+.+ +.|++|+. +|.|++||.++ |+++|+.....+.. ....+....+.+
T Consensus 314 V~~--g~VIvG~~v~d~~~~~~~~G~I~A~Da~T--Gkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glv 389 (764)
T TIGR03074 314 VAG--TTVVIGGRVADNYSTDEPSGVIRAFDVNT--GALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLV 389 (764)
T ss_pred EEC--CEEEEEecccccccccCCCcEEEEEECCC--CcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeE
Confidence 876 89999863 68899999998 99999987542111 122333445667
Q ss_pred EEEe------------------ecCcEEEEC-CCCCEEeeecCCC-c-----eeccccccc--cCCC----eEEEEeeCC
Q 002615 731 ICCL------------------VDGHVVALD-SSGSIIWRCRTGG-P-----IFAGPCTSF--ALPS----QVLICSRNG 779 (900)
Q Consensus 731 ~~~~------------------~~g~v~~~d-~~G~~~w~~~~~~-~-----~~~~~~~~~--~~~~----~l~~g~~dg 779 (900)
|+++ +.+.|.++| .+|+++|.++.-. . ..+.|.+.. ..++ .++.++.+|
T Consensus 390 y~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G 469 (764)
T TIGR03074 390 YLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQG 469 (764)
T ss_pred EEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCC
Confidence 7643 235689999 9999999987522 1 122232211 1144 699999999
Q ss_pred eEEEEeCCCCceeeEE
Q 002615 780 SIYSFEQESGNLLWEY 795 (900)
Q Consensus 780 ~l~~~d~~tG~~~w~~ 795 (900)
.+|++|.+||+++|..
T Consensus 470 ~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 470 QIYVLDRRTGEPIVPV 485 (764)
T ss_pred EEEEEECCCCCEEeec
Confidence 9999999999999964
No 144
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.72 E-value=1.5e-14 Score=142.00 Aligned_cols=307 Identities=11% Similarity=0.056 Sum_probs=213.7
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
....+..|+.|..-+.|+..+|...-....++.-..+..++.++.++..|..+|.|..|...+|...|.+.....-..-.
T Consensus 75 ~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl 154 (399)
T KOG0296|consen 75 NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWL 154 (399)
T ss_pred CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEE
Confidence 45667778888889999999999776666665555678899999999999999999999999999999986322222333
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
.+.+....++.|+.||.+++|.+.++.....+..++....+-.+.+++.+++.+..+|.|.+||+++ |.++.+..-..
T Consensus 155 ~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~kt--g~p~~~~~~~e 232 (399)
T KOG0296|consen 155 KWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKT--GQPLHKITQAE 232 (399)
T ss_pred EecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCC--CceeEEecccc
Confidence 4556667888999999999999988655545544443333334445578999999999999999998 98887765322
Q ss_pred cce-eeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc------------eeccccccccCCCeEEEEeeCCeE
Q 002615 716 PAF-ASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP------------IFAGPCTSFALPSQVLICSRNGSI 781 (900)
Q Consensus 716 ~~~-~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~------------~~~~~~~~~~~~~~l~~g~~dg~l 781 (900)
... ........+..++.|+.++.++..+ .+|+++.-.....+ +-+.|.... =....+|+-||+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~--lpL~A~G~vdG~i 310 (399)
T KOG0296|consen 233 GLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSK--LPLAACGSVDGTI 310 (399)
T ss_pred cCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccc--cchhhcccccceE
Confidence 211 1122333455777788888888888 78888755442111 111111001 1134567889999
Q ss_pred EEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeee
Q 002615 782 YSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKL 861 (900)
Q Consensus 782 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 861 (900)
..||..+-+++.+.....+++..-+.. ...+++++.+|.|+.||.++| ++...+
T Consensus 311 ~iyD~a~~~~R~~c~he~~V~~l~w~~-------------t~~l~t~c~~g~v~~wDaRtG-------------~l~~~y 364 (399)
T KOG0296|consen 311 AIYDLAASTLRHICEHEDGVTKLKWLN-------------TDYLLTACANGKVRQWDARTG-------------QLKFTY 364 (399)
T ss_pred EEEecccchhheeccCCCceEEEEEcC-------------cchheeeccCceEEeeecccc-------------ceEEEE
Confidence 999999888888777777765544332 468999999999999999988 555444
Q ss_pred ccCCccccCcee--eCCEEEEeeeCCeEEEEEc
Q 002615 862 ELQGDIFSSPVM--IGGRVFVGCRDDYIYCIAL 892 (900)
Q Consensus 862 ~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~ 892 (900)
.-+...+-..++ ..+.++.++.|+...+|+.
T Consensus 365 ~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 365 TGHQMGILDFALSPQKRLVVTVSDDNTALVFEV 397 (399)
T ss_pred ecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence 443332222222 4567777888888877753
No 145
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.70 E-value=7.4e-15 Score=144.18 Aligned_cols=289 Identities=12% Similarity=0.091 Sum_probs=195.1
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
++.+.++...+..|+.|..-|.|+..+|.......-+...+.+..+..++.+|.+|.-+|.|..|...+|...|++....
T Consensus 69 avsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~ 148 (399)
T KOG0296|consen 69 AVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEV 148 (399)
T ss_pred EEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeeccc
Confidence 34455566678888889999999999999766666566666666777778889999999999999999999999985222
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEe
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIW 750 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w 750 (900)
.-..-....+....+++|+.+|.+.+|.+.+ +.....+..+........+.+++++++.+..||.|.+|| .+|+++.
T Consensus 149 ~dieWl~WHp~a~illAG~~DGsvWmw~ip~--~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~ 226 (399)
T KOG0296|consen 149 EDIEWLKWHPRAHILLAGSTDGSVWMWQIPS--QALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLH 226 (399)
T ss_pred CceEEEEecccccEEEeecCCCcEEEEECCC--cceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeE
Confidence 1111122233357889999999999999887 444444444443445556778899999999999999999 9999988
Q ss_pred eecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccc-ccccccccccCCCeEEEEE
Q 002615 751 RCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDE-HLQLKLESCLSIDRLVCIC 828 (900)
Q Consensus 751 ~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g 828 (900)
+.+..... -.|++... ....++.|+.++.++..+..+|+++...+-..+ ...+.... .-.+........-.+.++|
T Consensus 227 ~~~~~e~~-~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~-~l~~~~e~~~esve~~~~ss~lpL~A~G 304 (399)
T KOG0296|consen 227 KITQAEGL-ELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVP-ELKPSQEELDESVESIPSSSKLPLAACG 304 (399)
T ss_pred EecccccC-cCCccccccccceeEeccCCccEEEEccccceEEEecCCCCc-cccccchhhhhhhhhcccccccchhhcc
Confidence 77643322 23333332 345678888899999999999998865542111 01110000 0000011111224567888
Q ss_pred cCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceee-CCEEEEeeeCCeEEEEEccccccc
Q 002615 829 TSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI-GGRVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 829 ~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~-~~~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
+-||+|.+||...- +.+.....+..+.. .... ..+|+.+|.+|.++.||..||+++
T Consensus 305 ~vdG~i~iyD~a~~-------------~~R~~c~he~~V~~-l~w~~t~~l~t~c~~g~v~~wDaRtG~l~ 361 (399)
T KOG0296|consen 305 SVDGTIAIYDLAAS-------------TLRHICEHEDGVTK-LKWLNTDYLLTACANGKVRQWDARTGQLK 361 (399)
T ss_pred cccceEEEEecccc-------------hhheeccCCCceEE-EEEcCcchheeeccCceEEeeeccccceE
Confidence 99999999998754 22333333333222 2222 378999999999999999999875
No 146
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.69 E-value=3.8e-15 Score=146.72 Aligned_cols=271 Identities=13% Similarity=0.077 Sum_probs=188.5
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEE-EecCCceeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWT-FQTCGEVKCQ 634 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~-~~~~~~~~~~ 634 (900)
.+..+..|+.|.++..||..|-.+....+.+.....+...++|+..|..||.||.|.+||+++|+++-. +..+......
T Consensus 126 ~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~ 205 (480)
T KOG0271|consen 126 TGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITA 205 (480)
T ss_pred CCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeE
Confidence 466889999999999999999999888888887777899999999999999999999999999987532 2223322222
Q ss_pred eeE-----eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee
Q 002615 635 PVV-----DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 635 ~~~-----~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w 709 (900)
..+ .+..+.+..++.||.+..||...|+++.....+.....+... +.++.||.|+.|++|..|+... |...-
T Consensus 206 Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrw-GG~gliySgS~DrtIkvw~a~d--G~~~r 282 (480)
T KOG0271|consen 206 LAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRW-GGEGLIYSGSQDRTIKVWRALD--GKLCR 282 (480)
T ss_pred EeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEE-cCCceEEecCCCceEEEEEccc--hhHHH
Confidence 222 233456788899999999999999998876655444443333 3368999999999999999776 65443
Q ss_pred EeecCCcceeee------------------------------------eeeeCCCEEEEEeecCcEEEEC--CCCCEEee
Q 002615 710 LHELEVPAFASL------------------------------------CITSANRHVICCLVDGHVVALD--SSGSIIWR 751 (900)
Q Consensus 710 ~~~~~~~~~~s~------------------------------------~~~~~~~~i~~~~~~g~v~~~d--~~G~~~w~ 751 (900)
....+..-+... ..-..+.+++.|+.|..++.++ .+-+.+-+
T Consensus 283 ~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~r 362 (480)
T KOG0271|consen 283 ELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITR 362 (480)
T ss_pred hhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhh
Confidence 332221111111 1112245799999999999999 44445433
Q ss_pred ecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecC-CceecccccccccccccccccCCCeEEEEEcC
Q 002615 752 CRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVG-DPITASAYIDEHLQLKLESCLSIDRLVCICTS 830 (900)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 830 (900)
.......... +...-+...|..++.|..|..||..+|+++-++.-+ ..+|......+ .+++..|+.
T Consensus 363 mtgHq~lVn~-V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaD------------sRLlVS~Sk 429 (480)
T KOG0271|consen 363 MTGHQALVNH-VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSAD------------SRLLVSGSK 429 (480)
T ss_pred hhchhhheee-EEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccC------------ccEEEEcCC
Confidence 3322111111 111112345667788999999999999998877633 34444443333 679999999
Q ss_pred CCcEEEEEeecC
Q 002615 831 SGSIHILRVNLD 842 (900)
Q Consensus 831 ~G~v~~~d~~~~ 842 (900)
|.+|.+|+.++.
T Consensus 430 DsTLKvw~V~tk 441 (480)
T KOG0271|consen 430 DSTLKVWDVRTK 441 (480)
T ss_pred CceEEEEEeeee
Confidence 999999999854
No 147
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.68 E-value=4.3e-14 Score=134.05 Aligned_cols=275 Identities=12% Similarity=0.091 Sum_probs=198.6
Q ss_pred ceEEEEecCCCeEEEEECC-----CCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce
Q 002615 557 DIYLFVGSHSHKFICADAK-----RSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~-----tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
.+.++.++.|..+..|++. .|.++..+..+........++.++++.+.+++|+.++.||..+|+..-+|..+...
T Consensus 28 ~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~d 107 (315)
T KOG0279|consen 28 SDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKD 107 (315)
T ss_pred CceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCc
Confidence 4556777778877777654 46667777776666677888999999999999999999999999998889888888
Q ss_pred eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC--CccccCceeecc--CCEEEEEeCCCcEEEEEcCCCCcee
Q 002615 632 KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG--GSIFGSPAIDEV--HDVLYVASTSGRLTAISVKALPFHT 707 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~--~~~~~~~~~~~~--~~~l~v~t~~g~l~~~~~~~~~g~~ 707 (900)
+.+..+..++..|+.|+.|.++..||... .+..+..-+ ....+...+.++ +-.|..+++|+.+..||+++ -+.
T Consensus 108 Vlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~--~~l 184 (315)
T KOG0279|consen 108 VLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN--CQL 184 (315)
T ss_pred eEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC--cch
Confidence 88888888889999999999999999764 555555443 344555566664 34677788999999999987 555
Q ss_pred eeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEE-eeCCeEEEEe
Q 002615 708 LWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLIC-SRNGSIYSFE 785 (900)
Q Consensus 708 ~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g-~~dg~l~~~d 785 (900)
.-.+..+........+++++..+..|+.+|.++.+| ..|+-++.+.....+.+.. + ..+..|++ ..+-.|..||
T Consensus 185 ~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~---f-spnrywL~~at~~sIkIwd 260 (315)
T KOG0279|consen 185 RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLC---F-SPNRYWLCAATATSIKIWD 260 (315)
T ss_pred hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEE---e-cCCceeEeeccCCceEEEe
Confidence 555555555556777888888888899999999999 8888888887666665543 2 23344443 3455699999
Q ss_pred CCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 786 QESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 786 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
.+++..+-.++......+...-. .....-....++..++.|.++|.|++|...
T Consensus 261 l~~~~~v~~l~~d~~g~s~~~~~--~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 261 LESKAVVEELKLDGIGPSSKAGD--PICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccchhhhhhccccccccccccCC--cEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 99998887665432211100000 000000112348899999999999999764
No 148
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.68 E-value=5.9e-14 Score=147.96 Aligned_cols=267 Identities=15% Similarity=0.150 Sum_probs=187.1
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
.+..+++++.+|.++.||..+++.......+........+.+++..+++++.+|.++.||..+++....+..+.......
T Consensus 20 ~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~ 99 (289)
T cd00200 20 DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSV 99 (289)
T ss_pred CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEE
Confidence 45788888889999999999988777666554433456677777789999999999999999888777776555344444
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
.+.+++..+++++.++.++.||..+++....+...........+.+.+..+++++.+|.+..||.++ ++.+.....+.
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~--~~~~~~~~~~~ 177 (289)
T cd00200 100 AFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT--GKCVATLTGHT 177 (289)
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc--cccceeEecCc
Confidence 5555556666777699999999998888887764443444455555445666666699999999886 66666665544
Q ss_pred cceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec-CCCceeccccccccCCCeEEEEee-CCeEEEEeCCCCcee
Q 002615 716 PAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCR-TGGPIFAGPCTSFALPSQVLICSR-NGSIYSFEQESGNLL 792 (900)
Q Consensus 716 ~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~-~~~~~~~~~~~~~~~~~~l~~g~~-dg~l~~~d~~tG~~~ 792 (900)
.......+..++..+++++.++.+..|| .+++.+..+. ....+... ....++.+++++. +|.++.||..+++..
T Consensus 178 ~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 254 (289)
T cd00200 178 GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV---AFSPDGYLLASGSEDGTIRVWDLRTGECV 254 (289)
T ss_pred cccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEE---EEcCCCcEEEEEcCCCcEEEEEcCCceeE
Confidence 3445556666666888888899999999 7777765553 22233222 1222345555544 999999999988887
Q ss_pred eEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 793 WEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 793 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
..+...........+.. ++..+++++.+|.+.+|+
T Consensus 255 ~~~~~~~~~i~~~~~~~-----------~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 255 QTLSGHTNSVTSLAWSP-----------DGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEccccCCcEEEEEECC-----------CCCEEEEecCCCeEEecC
Confidence 76653332222222222 267899999999999884
No 149
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.67 E-value=1.7e-14 Score=133.14 Aligned_cols=243 Identities=14% Similarity=0.126 Sum_probs=184.9
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
..-++++......+..|..||+..|.++.++..++.-..-+..+.|+..+..+..|..++.||..||++..++..+..-.
T Consensus 25 yN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqV 104 (307)
T KOG0316|consen 25 YNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQV 104 (307)
T ss_pred EccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccccccee
Confidence 34456666666678899999999999999998887654455666676788888889999999999999998888877666
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCC--eEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNY--RCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g--~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
-...+.++...++.|+.|..+.+||-.+. +++..+.....-.++..+. +..|+.|+.+|++..||+.. |.. ..
T Consensus 105 NtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~--G~l-~s 179 (307)
T KOG0316|consen 105 NTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRK--GTL-SS 179 (307)
T ss_pred eEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeec--cee-eh
Confidence 66667777788999999999999997764 4454444333334444444 37899999999999999997 653 33
Q ss_pred eecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC-ceeccccccccCCCeEEEEeeCCeEEEEeCCC
Q 002615 711 HELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG-PIFAGPCTSFALPSQVLICSRNGSIYSFEQES 788 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~-~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t 788 (900)
...+.|+ .+..+..+++...+++.++.+..+| .+|+++-.++... .-+...|.....+..++.|+.||.+|.||..+
T Consensus 180 Dy~g~pi-t~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd 258 (307)
T KOG0316|consen 180 DYFGHPI-TSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD 258 (307)
T ss_pred hhcCCcc-eeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc
Confidence 3344444 5667778888999999999999999 8999886655322 22333343344566789999999999999999
Q ss_pred CceeeEEecCCce
Q 002615 789 GNLLWEYSVGDPI 801 (900)
Q Consensus 789 G~~~w~~~~~~~~ 801 (900)
++++-++..++.+
T Consensus 259 ~~~~sk~~~~~~v 271 (307)
T KOG0316|consen 259 ETQISKLSVVSTV 271 (307)
T ss_pred ceeeeeeccCCce
Confidence 9999888877765
No 150
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.62 E-value=3.8e-13 Score=141.74 Aligned_cols=272 Identities=17% Similarity=0.165 Sum_probs=181.6
Q ss_pred eeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 590 ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
..+..++++++.+++++.+|.++.||..+++.......+........+.+++..+++++.+|.++.||..+++.+..+..
T Consensus 12 i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~ 91 (289)
T cd00200 12 VTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTG 91 (289)
T ss_pred EEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEec
Confidence 34667778888999999999999999999887776665544444555666667899999999999999998877777665
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCE
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSI 748 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~ 748 (900)
...........+.+..+++++.+|.+..||..+ ++.......+........+..++..+++++.++.+..+| .+++.
T Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~ 169 (289)
T cd00200 92 HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET--GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC 169 (289)
T ss_pred cCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC--cEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccccc
Confidence 443344444554345555555599999999886 677766654443345555555556666666699999999 77777
Q ss_pred EeeecCCC-ceeccccccccC-CCeEEEEeeCCeEEEEeCCCCceeeEEecCC-ceecccccccccccccccccCCCeEE
Q 002615 749 IWRCRTGG-PIFAGPCTSFAL-PSQVLICSRNGSIYSFEQESGNLLWEYSVGD-PITASAYIDEHLQLKLESCLSIDRLV 825 (900)
Q Consensus 749 ~w~~~~~~-~~~~~~~~~~~~-~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 825 (900)
+..+.... .+... .... +..+++++.+|.++.||..+++....+.... .+... .... .+..+
T Consensus 170 ~~~~~~~~~~i~~~---~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~-~~~~-----------~~~~~ 234 (289)
T cd00200 170 VATLTGHTGEVNSV---AFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV-AFSP-----------DGYLL 234 (289)
T ss_pred ceeEecCccccceE---EECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEE-EEcC-----------CCcEE
Confidence 65554332 22111 1222 3478888889999999999888776653332 22222 2221 15566
Q ss_pred EEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceee--CCEEEEeeeCCeEEEEE
Q 002615 826 CICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI--GGRVFVGCRDDYIYCIA 891 (900)
Q Consensus 826 ~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~--~~~l~vg~~dg~l~~ld 891 (900)
++++.+|.|++|+..++ +....+..+...+....+. +..+++++.||.+..|+
T Consensus 235 ~~~~~~~~i~i~~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 235 ASGSEDGTIRVWDLRTG-------------ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCCcEEEEEcCCc-------------eeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 66666999999998754 2222222222223333333 36888899999998875
No 151
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.62 E-value=4.8e-13 Score=127.76 Aligned_cols=268 Identities=10% Similarity=-0.016 Sum_probs=200.2
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCC----cE--EEEEecCC
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTG----DI--YWTFQTCG 629 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG----~~--~w~~~~~~ 629 (900)
+..++..+|.||.+..||..|.....-++++....-++.+++.++.|..|.-|+....|++.+- .. ...+..+.
T Consensus 66 Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHt 145 (343)
T KOG0286|consen 66 DSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHT 145 (343)
T ss_pred CcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCcc
Confidence 5678889999999999999999888888888776667889999999999999987777766543 22 22344455
Q ss_pred ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceee
Q 002615 630 EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 630 ~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
...+...+.+ ++.|+++|.|.+...||.++|+.+..+..+..-..+..+.+ +.+..+.|+.++.-+.||.+. +...
T Consensus 146 gylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~--~~c~ 222 (343)
T KOG0286|consen 146 GYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS--GQCV 222 (343)
T ss_pred ceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC--ccee
Confidence 5555555554 68899999999999999999999988876543333333444 456777788899999999998 8888
Q ss_pred eEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccC-CCeEEEEeeCCeEEEEeC
Q 002615 709 WLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFAL-PSQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 709 w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~l~~~d~ 786 (900)
..+..+...+.+..+.+++..+..|+.|+...+|| ..++.+-.+.....+.....+.+.. +..++.|..|.+.++||.
T Consensus 223 qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 223 QTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred EeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 88887777778888999999999999999999999 7777776665443332222222333 445677778899999999
Q ss_pred CCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 787 ESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 787 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
-.|+..-.+.-+.+-++..-+. +++.-++.|+.|-.|.+|
T Consensus 303 lk~e~vg~L~GHeNRvScl~~s-----------~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 303 LKGERVGVLAGHENRVSCLGVS-----------PDGMAVATGSWDSTLRIW 342 (343)
T ss_pred cccceEEEeeccCCeeEEEEEC-----------CCCcEEEecchhHheeec
Confidence 9888877666555544443332 237788888888888887
No 152
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.61 E-value=4.7e-13 Score=124.80 Aligned_cols=265 Identities=11% Similarity=0.138 Sum_probs=187.9
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcE--EEEEecCCceeeeeeE
Q 002615 560 LFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDI--YWTFQTCGEVKCQPVV 637 (900)
Q Consensus 560 v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~--~w~~~~~~~~~~~~~~ 637 (900)
+..+++|++|..|.+.||.+...+...+.-.....++++++.+.++++ ..|..||..++.. +-+|..+.......-+
T Consensus 13 LvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF 91 (311)
T KOG0315|consen 13 LVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGF 91 (311)
T ss_pred EEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEE
Confidence 677889999999999999999988887776667788899888888875 4599999888765 6677777555666667
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc
Q 002615 638 DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 638 ~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
..++...|+|+.||++..||.+.-.+...++.. ....+.++.++...|++++.+|.|.+||+.+..-...-.-+ ....
T Consensus 92 ~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe-~~~~ 169 (311)
T KOG0315|consen 92 QCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPE-DDTS 169 (311)
T ss_pred eecCeEEEecCCCceEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCC-CCcc
Confidence 777888999999999999999987666666555 44556677777888999999999999998862221111111 1122
Q ss_pred eeeeeeeeCCCEEEEEeecCcEEEEC-CCCCE------EeeecCC-CceeccccccccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 718 FASLCITSANRHVICCLVDGHVVALD-SSGSI------IWRCRTG-GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~------~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
..+..+..++.++..++..|+.|+++ .++.. +.+++.. +.+. .|...-....|..++.|.++++|+.++-
T Consensus 170 i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il--~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 170 IQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHIL--RCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred eeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEE--EEEECCCCcEEEeecCCceEEEEecCCc
Confidence 35667777888888888899999999 44432 2222211 1111 1222223456777888999999997765
Q ss_pred ceeeEEecCCc---eecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 790 NLLWEYSVGDP---ITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 790 ~~~w~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
++-+..+.+. +.-..|..+ +.+|+.|+.|+..++|+...+
T Consensus 248 -~kle~~l~gh~rWvWdc~FS~d------------g~YlvTassd~~~rlW~~~~~ 290 (311)
T KOG0315|consen 248 -FKLELVLTGHQRWVWDCAFSAD------------GEYLVTASSDHTARLWDLSAG 290 (311)
T ss_pred -eeeEEEeecCCceEEeeeeccC------------ccEEEecCCCCceeecccccC
Confidence 4333333222 233333333 889999999999999999876
No 153
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.60 E-value=6.9e-13 Score=142.01 Aligned_cols=286 Identities=15% Similarity=0.123 Sum_probs=204.3
Q ss_pred CCceEEEEecCC-CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 555 DSDIYLFVGSHS-HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 555 ~~~~~v~igs~~-g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
..++.|.+|+.. |.|..|+-.+..-+-+...+..-..+..+++||+.|..|+.||.|..||..+|-..-+|.-+....+
T Consensus 317 ~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt 396 (893)
T KOG0291|consen 317 STGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVT 396 (893)
T ss_pred ccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceE
Confidence 346777777754 7888888877766656555544456788999999999999999999999999998888887776666
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCcc-ccCceeeccCCEEEEEeCCC-cEEEEEcCCCCceeeeEe
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSI-FGSPAIDEVHDVLYVASTSG-RLTAISVKALPFHTLWLH 711 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~-~~~~~~~~~~~~l~v~t~~g-~l~~~~~~~~~g~~~w~~ 711 (900)
...+...++.+++.|-||++.+||.+.......+..+.++ +++.++++.+..+.+|+.+. .|+.|+.++ |+.+-..
T Consensus 397 ~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT--GqllDiL 474 (893)
T KOG0291|consen 397 AVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT--GQLLDIL 474 (893)
T ss_pred EEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec--Ceeeehh
Confidence 6677777888999999999999999999988888887765 45566666667777777654 688999998 9988877
Q ss_pred ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC---CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCC
Q 002615 712 ELEVPAFASLCITSANRHVICCLVDGHVVALD---SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQES 788 (900)
Q Consensus 712 ~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d---~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t 788 (900)
..+....+...+.+.+..++.+++|.+|..|| .+|+ +-++.....+.... ..-.+..|.+.+.||.|..||.+.
T Consensus 475 sGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~-vEtl~i~sdvl~vs--frPdG~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 475 SGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT-VETLEIRSDVLAVS--FRPDGKELAVATLDGQITFFDIKE 551 (893)
T ss_pred cCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce-eeeEeeccceeEEE--EcCCCCeEEEEEecceEEEEEhhh
Confidence 77776667777888889999999999999998 3333 22333333222221 111356899999999999999988
Q ss_pred CceeeEEecCCceeccccccccc---------ccccccccCCCeEEEEEcCCCcEEEEEeecCccc
Q 002615 789 GNLLWEYSVGDPITASAYIDEHL---------QLKLESCLSIDRLVCICTSSGSIHILRVNLDVTG 845 (900)
Q Consensus 789 G~~~w~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~ 845 (900)
+...-.++........-...+.+ .+..-....+++.|.+|+.+..|.+|+..++..-
T Consensus 552 ~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vll 617 (893)
T KOG0291|consen 552 AVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLL 617 (893)
T ss_pred ceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhhee
Confidence 76654332111100000000000 0000012345889999999999999999877443
No 154
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.60 E-value=2.2e-12 Score=138.22 Aligned_cols=328 Identities=14% Similarity=0.158 Sum_probs=225.4
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC-CEEEEEECCCCcEEEEEecCCceeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK-GKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d-g~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
.-..|.+|=.+|.+..|..-+=.++........-..++.+...|+.|.+||.. |.|.+|+-++-..+.+.+.+..-..+
T Consensus 276 ~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~ 355 (893)
T KOG0291|consen 276 GTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITS 355 (893)
T ss_pred CceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceee
Confidence 34456666677877788887777777777665444567777778899999865 67888887666655555555555666
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
..+.+++..|.+|+.||.|..||..+|-|.-++.-+..-.+...+...++.++..+.||++.+||++. +...-++..+
T Consensus 356 l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkR--YrNfRTft~P 433 (893)
T KOG0291|consen 356 LAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKR--YRNFRTFTSP 433 (893)
T ss_pred EEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecc--cceeeeecCC
Confidence 77888888999999999999999999999999887766666666666678899999999999999987 7777777776
Q ss_pred Ccce-eeeeeeeCCCEEEEEeecC-cEEEEC-CCCCEEeeecC-CCceeccccccccCCCeEEEEeeCCeEEEEeCCCC-
Q 002615 715 VPAF-ASLCITSANRHVICCLVDG-HVVALD-SSGSIIWRCRT-GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG- 789 (900)
Q Consensus 715 ~~~~-~s~~~~~~~~~i~~~~~~g-~v~~~d-~~G~~~w~~~~-~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG- 789 (900)
.+.. ++.+..+++..+++|+.|. .|++|+ ++|+++=..+. .+|+.+.. +. ..+..|+.++.|.+|..||.-+.
T Consensus 434 ~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~-f~-~~~~~LaS~SWDkTVRiW~if~s~ 511 (893)
T KOG0291|consen 434 EPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLS-FS-PDGSLLASGSWDKTVRIWDIFSSS 511 (893)
T ss_pred CceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeE-Ec-cccCeEEeccccceEEEEEeeccC
Confidence 6653 4445555677777777653 688999 99998755543 34554322 11 13457899999999999997433
Q ss_pred ceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCccc----ccccccccc--eeee-eeec
Q 002615 790 NLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTG----KENQSKDHM--VQEF-AKLE 862 (900)
Q Consensus 790 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~----~~~~~~~~~--~~~~-~~~~ 862 (900)
..+-+++..+.+....+. +++..+++++-||.|-+||.+.+... ......... ...+ ....
T Consensus 512 ~~vEtl~i~sdvl~vsfr------------PdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~s 579 (893)
T KOG0291|consen 512 GTVETLEIRSDVLAVSFR------------PDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENS 579 (893)
T ss_pred ceeeeEeeccceeEEEEc------------CCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhc
Confidence 123344555554443333 34899999999999999999765321 000000000 0001 0111
Q ss_pred cCCccccCcee--eCCEEEEeeeCCeEEEEEcccccccc
Q 002615 863 LQGDIFSSPVM--IGGRVFVGCRDDYIYCIALETQHLEE 899 (900)
Q Consensus 863 l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~tg~~~~ 899 (900)
-.+..|++..+ +++.|..|+..+++-.|+..++-+.+
T Consensus 580 a~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllk 618 (893)
T KOG0291|consen 580 AKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLK 618 (893)
T ss_pred ccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheee
Confidence 22334554444 56788888889999999988876644
No 155
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.60 E-value=3.2e-13 Score=124.78 Aligned_cols=234 Identities=14% Similarity=0.160 Sum_probs=172.1
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
.+-+..+|++.+....|.++..||+..|..+.++..++.-.--.....++..+..+..|..++.||..+|+...++..+.
T Consensus 22 avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~ 101 (307)
T KOG0316|consen 22 AVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHL 101 (307)
T ss_pred EEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccccc
Confidence 34456678888888889999999999999999998766433333333345567777889999999999999999998877
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEe
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIW 750 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w 750 (900)
.-.....+..+...++.|+.+..+.+||-.+.+-+++..+........+.. ..+..|+.|+.||++..|| ..|+..-
T Consensus 102 aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~--v~~heIvaGS~DGtvRtydiR~G~l~s 179 (307)
T KOG0316|consen 102 AQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSID--VAEHEIVAGSVDGTVRTYDIRKGTLSS 179 (307)
T ss_pred ceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEE--ecccEEEeeccCCcEEEEEeecceeeh
Confidence 766667777666778889999999999988766677666555444444433 3567899999999999999 8887642
Q ss_pred eecCCCceeccccccccC-CCeEEEEeeCCeEEEEeCCCCceeeEEecCCce-ecc-cccccccccccccccCCCeEEEE
Q 002615 751 RCRTGGPIFAGPCTSFAL-PSQVLICSRNGSIYSFEQESGNLLWEYSVGDPI-TAS-AYIDEHLQLKLESCLSIDRLVCI 827 (900)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~ 827 (900)
.+ .+.|+.+.. +.. .+-.++++.|+.|..+|.+||+++-.|+-+.+. +.. -.+. .++..++.
T Consensus 180 Dy-~g~pit~vs---~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~-----------qsdthV~s 244 (307)
T KOG0316|consen 180 DY-FGHPITSVS---FSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLN-----------QSDTHVFS 244 (307)
T ss_pred hh-cCCcceeEE---ecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeec-----------ccceeEEe
Confidence 22 234443322 333 456888899999999999999998766543321 111 1111 23789999
Q ss_pred EcCCCcEEEEEeecC
Q 002615 828 CTSSGSIHILRVNLD 842 (900)
Q Consensus 828 g~~~G~v~~~d~~~~ 842 (900)
|++||.||+||.-+.
T Consensus 245 gSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 245 GSEDGKVYFWDLVDE 259 (307)
T ss_pred ccCCceEEEEEeccc
Confidence 999999999999765
No 156
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.57 E-value=1.9e-13 Score=134.94 Aligned_cols=289 Identities=11% Similarity=0.032 Sum_probs=189.9
Q ss_pred EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe
Q 002615 583 IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR 662 (900)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~ 662 (900)
+..++....++.+++++..++.|+.|.++..||+.|-.+..+.+.+...+.+..+.+++..|..|+.||.|..||+++|+
T Consensus 111 ~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~ 190 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQ 190 (480)
T ss_pred cCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCC
Confidence 33444444577888999999999999999999999999998888888888888899999999999999999999999987
Q ss_pred EEEe-eccCCccccCce-----eeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeec
Q 002615 663 CVYK-LPCGGSIFGSPA-----IDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVD 736 (900)
Q Consensus 663 ~~w~-~~~~~~~~~~~~-----~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~ 736 (900)
++=+ +..+...+.+.+ ..+...++..++.||.+..||.+. |..+.....+...... ...-..+.+|.|+.|
T Consensus 191 ~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~--~~~~~~lsgHT~~VTC-vrwGG~gliySgS~D 267 (480)
T KOG0271|consen 191 QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL--GTCVRTLSGHTASVTC-VRWGGEGLIYSGSQD 267 (480)
T ss_pred cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccC--ceEEEEeccCccceEE-EEEcCCceEEecCCC
Confidence 6532 111111111111 122234677778899999999887 7777666555443222 222346899999999
Q ss_pred CcEEEEC-CCCCEEeeecCCCc------------eeccc-----------------------cccccCCCeEEEEeeCCe
Q 002615 737 GHVVALD-SSGSIIWRCRTGGP------------IFAGP-----------------------CTSFALPSQVLICSRNGS 780 (900)
Q Consensus 737 g~v~~~d-~~G~~~w~~~~~~~------------~~~~~-----------------------~~~~~~~~~l~~g~~dg~ 780 (900)
++|.+|+ .+|...-.++..+. .-..+ .+.......++.|+.|+.
T Consensus 268 rtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~t 347 (480)
T KOG0271|consen 268 RTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFT 347 (480)
T ss_pred ceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCce
Confidence 9999999 77765433221100 00000 001122356999999999
Q ss_pred EEEEeCCCCc-eeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeee
Q 002615 781 IYSFEQESGN-LLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFA 859 (900)
Q Consensus 781 l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~ 859 (900)
++.|++..-+ .+-+..-+...+....+ .+++.+|+.++-|..|.+|+.++|+ .+.
T Consensus 348 lflW~p~~~kkpi~rmtgHq~lVn~V~f-----------SPd~r~IASaSFDkSVkLW~g~tGk-------------~la 403 (480)
T KOG0271|consen 348 LFLWNPFKSKKPITRMTGHQALVNHVSF-----------SPDGRYIASASFDKSVKLWDGRTGK-------------FLA 403 (480)
T ss_pred EEEecccccccchhhhhchhhheeeEEE-----------CCCccEEEEeecccceeeeeCCCcc-------------hhh
Confidence 9999976433 33222222222222222 2348899999999999999999883 333
Q ss_pred eeccCCccccCcee-eCC-EEEEeeeCCeEEEEEccccccc
Q 002615 860 KLELQGDIFSSPVM-IGG-RVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 860 ~~~l~~~~~ss~~~-~~~-~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
++.-+-..+..... .+. .|+.|+.|..|..|+..+.++.
T Consensus 404 sfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~ 444 (480)
T KOG0271|consen 404 SFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLK 444 (480)
T ss_pred hhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeec
Confidence 33221111222222 233 5566788999999999998875
No 157
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.56 E-value=2.2e-14 Score=137.93 Aligned_cols=269 Identities=15% Similarity=0.164 Sum_probs=202.9
Q ss_pred CCceEEEEecCCCeEEEEECCCCcEEEEEec--------CCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEe
Q 002615 555 DSDIYLFVGSHSHKFICADAKRSSVLWEIKL--------EGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQ 626 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~--------~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~ 626 (900)
.++.++..||.||.|-.||-.+|+++-..+. .+....+..++.|...+..|+.||.|..|...||..+.+|+
T Consensus 223 PDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFd 302 (508)
T KOG0275|consen 223 PDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFD 302 (508)
T ss_pred CCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhh
Confidence 3688999999999999999999998754322 12223467788888889999999999999999999988876
Q ss_pred -cCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 627 -TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 627 -~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
.+..-.++..++.++..|..++.|.++..--.++|+++..+..+........+.+++..++.++.+|.+..|+.++ +
T Consensus 303 rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Kt--t 380 (508)
T KOG0275|consen 303 RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKT--T 380 (508)
T ss_pred hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcc--h
Confidence 4555566667777778899999999999999999999988888877777777888789999999999999999887 7
Q ss_pred eeeeEeecCCcce--eeeeeeeC-CCEEEEEeecCcEEEECCCCCEEeeecCCC---ceeccccccccCCCeEEEEeeCC
Q 002615 706 HTLWLHELEVPAF--ASLCITSA-NRHVICCLVDGHVVALDSSGSIIWRCRTGG---PIFAGPCTSFALPSQVLICSRNG 779 (900)
Q Consensus 706 ~~~w~~~~~~~~~--~s~~~~~~-~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~---~~~~~~~~~~~~~~~l~~g~~dg 779 (900)
+.+-+++.....+ .+..+.+. ...+++|...+.++..+-.|+++-.++.+. .-|... .....+..+|+...|+
T Consensus 381 eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~-~lSpkGewiYcigED~ 459 (508)
T KOG0275|consen 381 ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINA-ILSPKGEWIYCIGEDG 459 (508)
T ss_pred hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEE-EecCCCcEEEEEccCc
Confidence 7777666544322 23333333 457788888889999997788887766432 222222 2233567899999999
Q ss_pred eEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 780 SIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 780 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
.+|||+..+|++..+..++.......... +..+.++.-++||.+..|
T Consensus 460 vlYCF~~~sG~LE~tl~VhEkdvIGl~HH-----------PHqNllAsYsEDgllKLW 506 (508)
T KOG0275|consen 460 VLYCFSVLSGKLERTLPVHEKDVIGLTHH-----------PHQNLLASYSEDGLLKLW 506 (508)
T ss_pred EEEEEEeecCceeeeeecccccccccccC-----------cccchhhhhcccchhhhc
Confidence 99999999999988877766543332222 225666777788877666
No 158
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.55 E-value=7.4e-13 Score=129.62 Aligned_cols=270 Identities=12% Similarity=0.081 Sum_probs=190.9
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
.+..+..|+.|+.+..||..||+++-....+....-...++.-..++|.+..|+.+.|||++..+++-.+..+-..+.+.
T Consensus 162 ~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L 241 (460)
T KOG0285|consen 162 GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCL 241 (460)
T ss_pred CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEE
Confidence 47778889999999999999999987766555544567788888899999999999999999999887665443333344
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
.+.+.-..|++|+.|..+..||..+...+..+..+.....+....+.+..++.++.|+.+..||+.. |+..-....+.
T Consensus 242 ~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a--gkt~~tlt~hk 319 (460)
T KOG0285|consen 242 DLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA--GKTMITLTHHK 319 (460)
T ss_pred eccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeecc--CceeEeeeccc
Confidence 4555667899999999999999999988888776666666666665578899999999999999998 87776665555
Q ss_pred cceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeE
Q 002615 716 PAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWE 794 (900)
Q Consensus 716 ~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~ 794 (900)
......++.+....+..++ ...+-+++ ..|..+..++....+... +....++.+++|+.+|.+..||-++|----.
T Consensus 320 ksvral~lhP~e~~fASas-~dnik~w~~p~g~f~~nlsgh~~iint--l~~nsD~v~~~G~dng~~~fwdwksg~nyQ~ 396 (460)
T KOG0285|consen 320 KSVRALCLHPKENLFASAS-PDNIKQWKLPEGEFLQNLSGHNAIINT--LSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR 396 (460)
T ss_pred ceeeEEecCCchhhhhccC-CccceeccCCccchhhccccccceeee--eeeccCceEEEcCCceEEEEEecCcCccccc
Confidence 5444444544443344443 45688888 777776554332223222 2344578899999999999999988842111
Q ss_pred E---ecCC------ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 795 Y---SVGD------PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 795 ~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
. ..++ .++++ +++. .+..++.|..|..|.+|..+..
T Consensus 397 ~~t~vqpGSl~sEagI~as-~fDk-----------tg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 397 GQTIVQPGSLESEAGIFAS-CFDK-----------TGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred ccccccCCccccccceeEE-eecc-----------cCceEEeccCCcceEEEecccc
Confidence 1 1111 12222 2222 2778888888888888866543
No 159
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.54 E-value=1.3e-11 Score=127.22 Aligned_cols=308 Identities=15% Similarity=0.147 Sum_probs=207.3
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec---CCceee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT---CGEVKC 633 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~---~~~~~~ 633 (900)
--++..|+.|+.+..|+.-==++...+..+.+...++-+++||.++...+.||.+|+||-.+|+.+-.+.- +.....
T Consensus 160 PfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIf 239 (603)
T KOG0318|consen 160 PFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIF 239 (603)
T ss_pred ceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEE
Confidence 34788888999888887443344444455666667788999998888888999999999999999887763 333344
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCcccc--CceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEe
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFG--SPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLH 711 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~--~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~ 711 (900)
...+.++...+.+.+.|.++..||..+.+++.++..+..+-- --++-. .+.|+.-+.+|.+..+|+.. ++++...
T Consensus 240 alsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq-kd~lItVSl~G~in~ln~~d--~~~~~~i 316 (603)
T KOG0318|consen 240 ALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ-KDHLITVSLSGTINYLNPSD--PSVLKVI 316 (603)
T ss_pred EEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe-CCeEEEEEcCcEEEEecccC--CChhhee
Confidence 556778888999999999999999999999988877654211 112222 47888889999999999988 6777777
Q ss_pred ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeee-cCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 712 ELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRC-RTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 712 ~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~-~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
..+...+.+.....++.++|.|++||.|.-|+ .+|.----. +........ +.....+.++..+.|..|..++.+.+
T Consensus 317 ~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~--~~~~~~~~~~t~g~Dd~l~~~~~~~~ 394 (603)
T KOG0318|consen 317 SGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKG--MAASESGELFTIGWDDTLRVISLKDN 394 (603)
T ss_pred cccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEE--EeecCCCcEEEEecCCeEEEEecccC
Confidence 77777777888888899999999999999999 666431101 111111111 11333478999999999999987554
Q ss_pred ceeeE--EecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCcc
Q 002615 790 NLLWE--YSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDI 867 (900)
Q Consensus 790 ~~~w~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 867 (900)
...-. .+++....... +. ..++.+.+.+.+ .|.++.-.++ .....+ ..
T Consensus 395 ~~t~~~~~~lg~QP~~la-v~-----------~d~~~avv~~~~-~iv~l~~~~~---------------~~~~~~--~y 444 (603)
T KOG0318|consen 395 GYTKSEVVKLGSQPKGLA-VL-----------SDGGTAVVACIS-DIVLLQDQTK---------------VSSIPI--GY 444 (603)
T ss_pred cccccceeecCCCceeEE-Ec-----------CCCCEEEEEecC-cEEEEecCCc---------------ceeecc--cc
Confidence 33211 23333322111 11 114455555544 4777754422 111111 11
Q ss_pred ccCc-ee--eCCEEEEeeeCCeEEEEEcccccccc
Q 002615 868 FSSP-VM--IGGRVFVGCRDDYIYCIALETQHLEE 899 (900)
Q Consensus 868 ~ss~-~~--~~~~l~vg~~dg~l~~ld~~tg~~~~ 899 (900)
.++. ++ .+..+.+|..|+.|+.|.+..+.+.+
T Consensus 445 ~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~e 479 (603)
T KOG0318|consen 445 ESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKE 479 (603)
T ss_pred ccceEEEcCCCCEEEEecccceEEEEEecCCcccc
Confidence 1111 12 46899999999999999998777544
No 160
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.51 E-value=2.8e-11 Score=115.84 Aligned_cols=269 Identities=12% Similarity=0.071 Sum_probs=188.8
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC----e--EEE
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY----R--CVY 665 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g----~--~~w 665 (900)
+.-++.|...|+.++.||.|..||..|.....-++.+...+...++.+.++.|.+|+-|+....|+.++. . ...
T Consensus 60 ~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r 139 (343)
T KOG0286|consen 60 AMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSR 139 (343)
T ss_pred eeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeee
Confidence 3445566778999999999999999998877777777777777788999999999999988777777643 2 222
Q ss_pred eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeee-CCCEEEEEeecCcEEEEC-
Q 002615 666 KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITS-ANRHVICCLVDGHVVALD- 743 (900)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~-~~~~i~~~~~~g~v~~~d- 743 (900)
.+..+....++..+.+ ++.|+.++.+.+...||+++ |+..-.+..+.....+..+.+ +.+.++.|+.|.....||
T Consensus 140 ~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~--g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~ 216 (343)
T KOG0286|consen 140 ELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIET--GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDV 216 (343)
T ss_pred eecCccceeEEEEEcC-CCceEecCCCceEEEEEccc--ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeec
Confidence 2333444555554444 68899999999999999998 988888877766666666666 567778888899999999
Q ss_pred CCCCEEeeecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCc---eeccccccccccccccccc
Q 002615 744 SSGSIIWRCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDP---ITASAYIDEHLQLKLESCL 819 (900)
Q Consensus 744 ~~G~~~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~~~~~~~~ 819 (900)
..|..+-.+.....-..+ +.+. .+..+..|+.|+....||....+.+-.|..... +.+..| .
T Consensus 217 R~~~c~qtF~ghesDINs--v~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F------------S 282 (343)
T KOG0286|consen 217 RSGQCVQTFEGHESDINS--VRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF------------S 282 (343)
T ss_pred cCcceeEeecccccccce--EEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE------------c
Confidence 888776555533221111 1122 244577789999999999998887766653332 222222 2
Q ss_pred CCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEE
Q 002615 820 SIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCI 890 (900)
Q Consensus 820 ~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~l 890 (900)
.+++++++|..|.++++||.-.+ +......-+.+-++..-+ ++-.|-.|++|..|.+|
T Consensus 283 ~SGRlLfagy~d~~c~vWDtlk~-------------e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 283 KSGRLLFAGYDDFTCNVWDTLKG-------------ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIW 342 (343)
T ss_pred ccccEEEeeecCCceeEeecccc-------------ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeec
Confidence 34999999999999999998654 333333334444554444 34456678888877776
No 161
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.51 E-value=4.7e-12 Score=118.23 Aligned_cols=262 Identities=12% Similarity=0.120 Sum_probs=182.7
Q ss_pred ccccccccccccccc-------eEEeeCCceEEEEecCCCeEEEEECCCCcE--EEEEecCCceeeceeEecCCCEEEEE
Q 002615 535 ELWKVHMESCVDASP-------LVVLKDSDIYLFVGSHSHKFICADAKRSSV--LWEIKLEGRIECSAAVLADFSQVVVG 605 (900)
Q Consensus 535 ~~W~~~~~~~v~~sp-------~v~~~~~~~~v~igs~~g~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~~i~vg 605 (900)
.+|...+|.|...-+ .+....++..|.++.+.+ |..||..+++. +-.+..+.....++.+..+|..+|.|
T Consensus 23 RfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qh-vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTg 101 (311)
T KOG0315|consen 23 RFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQH-VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTG 101 (311)
T ss_pred eeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCe-eEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEec
Confidence 459999999964321 122334566777777776 99999998875 55677775555678888899999999
Q ss_pred eeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-CCccccCceeeccCC
Q 002615 606 CYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-GGSIFGSPAIDEVHD 684 (900)
Q Consensus 606 ~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~~~~~~~~~~~~~~~ 684 (900)
+.||.+..||..+-.....++....+. ..+..+...-+++|..+|+|.+||+.+..+....-. ......+..+..++.
T Consensus 102 seDgt~kIWdlR~~~~qR~~~~~spVn-~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgs 180 (311)
T KOG0315|consen 102 SEDGTVKIWDLRSLSCQRNYQHNSPVN-TVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGS 180 (311)
T ss_pred CCCceEEEEeccCcccchhccCCCCcc-eEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCc
Confidence 999999999998865555566554444 345666777899999999999999987655544322 234455666777678
Q ss_pred EEEEEeCCCcEEEEEcCCCCc----eeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeec-CCCcee
Q 002615 685 VLYVASTSGRLTAISVKALPF----HTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCR-TGGPIF 759 (900)
Q Consensus 685 ~l~v~t~~g~l~~~~~~~~~g----~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~-~~~~~~ 759 (900)
.+..++..|.+|+|++-+... +++-++..+........++++++++..++.|..+++|+.++-+.-+.. .++.-.
T Consensus 181 ml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rW 260 (311)
T KOG0315|consen 181 MLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRW 260 (311)
T ss_pred EEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCce
Confidence 888889999999999765222 233344444444456667788899999999999999994333222222 122212
Q ss_pred ccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecC
Q 002615 760 AGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVG 798 (900)
Q Consensus 760 ~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~ 798 (900)
.=.|.....+..|+.++.|+.+..|+...|+.+-.++-+
T Consensus 261 vWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh 299 (311)
T KOG0315|consen 261 VWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGH 299 (311)
T ss_pred EEeeeeccCccEEEecCCCCceeecccccCceeeecCCc
Confidence 222333445668999999999999999999977665533
No 162
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.51 E-value=8.5e-12 Score=138.48 Aligned_cols=266 Identities=15% Similarity=0.111 Sum_probs=195.4
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEE-EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWE-IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~-~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
.++++..|+.+..|..||..+|+..-. ...+..-..+..+...+++++.|+.|.++..||..+|+....+..+......
T Consensus 217 ~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 217 HDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred ecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEE
Confidence 378899999999999999999998765 4444332334444444678999999999999999999999888766655443
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
... ....+..|+.|.+|++|+..+|.++.....+.....+..+. ++.++.|+.+|.|..|++.+ ++.+.....+
T Consensus 297 ~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~--~~cl~sl~gH 370 (537)
T KOG0274|consen 297 LTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT--GKCLKSLSGH 370 (537)
T ss_pred EEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh--ceeeeeecCC
Confidence 332 34667778999999999999999998876433333333333 58999999999999999997 9998887776
Q ss_pred CcceeeeeeeeCC-CEEEEEeecCcEEEEC-CCC-CEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCce
Q 002615 715 VPAFASLCITSAN-RHVICCLVDGHVVALD-SSG-SIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNL 791 (900)
Q Consensus 715 ~~~~~s~~~~~~~-~~i~~~~~~g~v~~~d-~~G-~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~ 791 (900)
.....+. ..+. ..++.|+.|+.|.++| .++ +.+..+.......... ...+..+..++.||.|..||.++|+.
T Consensus 371 ~~~V~sl--~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l---~~~~~~Lvs~~aD~~Ik~WD~~~~~~ 445 (537)
T KOG0274|consen 371 TGRVYSL--IVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL---LLRDNFLVSSSADGTIKLWDAEEGEC 445 (537)
T ss_pred cceEEEE--EecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccc---ccccceeEeccccccEEEeecccCce
Confidence 5544343 3344 8999999999999999 777 5655554433333221 33456788889999999999999999
Q ss_pred eeEEecC--CceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccc
Q 002615 792 LWEYSVG--DPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGK 846 (900)
Q Consensus 792 ~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~ 846 (900)
+-.+... ..+.+.. .....+++++.+|.+.+||..++....
T Consensus 446 ~~~~~~~~~~~v~~l~--------------~~~~~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 446 LRTLEGRHVGGVSALA--------------LGKEEILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred eeeeccCCcccEEEee--------------cCcceEEEEecCCeeEEEecccCchhh
Confidence 8877764 1221111 114678888999999999999885443
No 163
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.51 E-value=2.4e-12 Score=126.17 Aligned_cols=277 Identities=15% Similarity=0.138 Sum_probs=189.8
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
-+..+.+.+..+..|+.|+++-.||+.+|+++-+...+-+..-...++.-.-++|+++.|+.+.|||++..+++..+..+
T Consensus 155 r~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGH 234 (460)
T KOG0285|consen 155 RSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGH 234 (460)
T ss_pred EEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccc
Confidence 35666777677888999999999999999998776644444444455555678999999999999999998888766543
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
-.-..+..+.+..+.|+.++.|..+..||..+ -..+.....+.....+..+.+.+..++.|+.|+.|..|| ..|+-.
T Consensus 235 lS~V~~L~lhPTldvl~t~grDst~RvWDiRt--r~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 235 LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT--RASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTM 312 (460)
T ss_pred cceeEEEeccccceeEEecCCcceEEEeeecc--cceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCcee
Confidence 22222333343357899999999999999998 556666665555556666666788999999999999999 888776
Q ss_pred eeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEc
Q 002615 750 WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICT 829 (900)
Q Consensus 750 w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 829 (900)
-....... +.-++..-.....++...-..+.+|+.-.|.++-.+..+..+..+..+.. ++.+++|+
T Consensus 313 ~tlt~hkk--svral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~ns------------D~v~~~G~ 378 (460)
T KOG0285|consen 313 ITLTHHKK--SVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNS------------DGVLVSGG 378 (460)
T ss_pred Eeeecccc--eeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeecc------------CceEEEcC
Confidence 54433221 11111111223445444444599999999988766555555555444443 89999999
Q ss_pred CCCcEEEEEeecCcccccccccccceeeeeeeccCCcc------ccCcee-eCCEEEEeeeCCeEEEEEcc
Q 002615 830 SSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDI------FSSPVM-IGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 830 ~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~ss~~~-~~~~l~vg~~dg~l~~ld~~ 893 (900)
++|.++.||.++|...+. ......+|.+ +.+..- .+.+|+.|-.|..|..|...
T Consensus 379 dng~~~fwdwksg~nyQ~----------~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 379 DNGSIMFWDWKSGHNYQR----------GQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred CceEEEEEecCcCccccc----------ccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 999999999998743322 2222333332 222211 35688888888888888643
No 164
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.50 E-value=7.1e-12 Score=139.77 Aligned_cols=273 Identities=17% Similarity=0.158 Sum_probs=200.1
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCc--EEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEEC-CCCcEEEEEecCC
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSS--VLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDY-LTGDIYWTFQTCG 629 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~--~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~-~tG~~~w~~~~~~ 629 (900)
+...+..+..++.++.+..|+..+++ .+-....+........+++++.+++.++.|+.|+.||. ..+..+.++..+.
T Consensus 167 fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~ 246 (456)
T KOG0266|consen 167 FSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHS 246 (456)
T ss_pred EcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCC
Confidence 44456678888899999999997777 44444445556667889999999999999999999999 5668888888777
Q ss_pred ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceee-
Q 002615 630 EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTL- 708 (900)
Q Consensus 630 ~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~- 708 (900)
..+.+..+.+.++.|+.|+.|+.++.||.++|+++-++..+....+...+..++..++.++.+|.+..||..+ |...
T Consensus 247 ~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~--~~~~~ 324 (456)
T KOG0266|consen 247 TYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET--GSKLC 324 (456)
T ss_pred CceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC--Cceee
Confidence 7777778888778999999999999999999999999988887777788888888999999999999999988 6632
Q ss_pred -eEeecCC-c-ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-e--eccccccccCCCeEEEEeeCCeE
Q 002615 709 -WLHELEV-P-AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-I--FAGPCTSFALPSQVLICSRNGSI 781 (900)
Q Consensus 709 -w~~~~~~-~-~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-~--~~~~~~~~~~~~~l~~g~~dg~l 781 (900)
-...... + .........++.++++++.++.+..|| ..+..+-.+..... . ...+ +....+..++.|+.|+.|
T Consensus 325 ~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~sg~~d~~v 403 (456)
T KOG0266|consen 325 LKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSP-TLSTGGKLIYSGSEDGSV 403 (456)
T ss_pred eecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecc-cccCCCCeEEEEeCCceE
Confidence 2221111 1 345666778889999999999999999 76766543332111 1 1111 112234578999999999
Q ss_pred EEEeCCCCceeeEEecC-CceecccccccccccccccccCCCeEEEEEc--CCCcEEEEEe
Q 002615 782 YSFEQESGNLLWEYSVG-DPITASAYIDEHLQLKLESCLSIDRLVCICT--SSGSIHILRV 839 (900)
Q Consensus 782 ~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--~~G~v~~~d~ 839 (900)
++||..++..+-.+..+ ........ .....+.+..++ .|+.+.+|..
T Consensus 404 ~~~~~~s~~~~~~l~~h~~~~~~~~~-----------~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 404 YVWDSSSGGILQRLEGHSKAAVSDLS-----------SHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred EEEeCCccchhhhhcCCCCCceeccc-----------cCCCcCeeeecCcCCCceEEEecC
Confidence 99999998777665544 22211111 223366777776 5777888754
No 165
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.48 E-value=1e-10 Score=120.73 Aligned_cols=318 Identities=12% Similarity=0.083 Sum_probs=200.3
Q ss_pred ccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEec---CCceeeceeEecCCCEEEEEeeCCEEEEEECC
Q 002615 541 MESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKL---EGRIECSAAVLADFSQVVVGCYKGKIYFLDYL 617 (900)
Q Consensus 541 ~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~ 617 (900)
+-.||..+| ++.+....+.||.+++||.+||+.+-++.- +..-......++|..++...+.|..+..||..
T Consensus 192 FV~~VRysP------DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs 265 (603)
T KOG0318|consen 192 FVNCVRYSP------DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVS 265 (603)
T ss_pred ceeeEEECC------CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEee
Confidence 345666666 355555666799999999999999888762 22223367788999999999999999999999
Q ss_pred CCcEEEEEecCCcee--eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcE
Q 002615 618 TGDIYWTFQTCGEVK--CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 618 tG~~~w~~~~~~~~~--~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
++++..++..+..+. ..-++-. ++.|++-+.+|.|..+++.++.+...+..+...+.+..+.+++..||.|+.+|.+
T Consensus 266 ~~slv~t~~~~~~v~dqqvG~lWq-kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I 344 (603)
T KOG0318|consen 266 TNSLVSTWPMGSTVEDQQVGCLWQ-KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHI 344 (603)
T ss_pred ccceEEEeecCCchhceEEEEEEe-CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceE
Confidence 999887776655421 1122232 5678888889999999999999877777776667777777778899999999999
Q ss_pred EEEEcCCCCceeeeEe-ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C-CCCEEe-eecCCCceeccccccccCCC-
Q 002615 696 TAISVKALPFHTLWLH-ELEVPAFASLCITSANRHVICCLVDGHVVALD-S-SGSIIW-RCRTGGPIFAGPCTSFALPS- 770 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~~-~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-~G~~~w-~~~~~~~~~~~~~~~~~~~~- 770 (900)
..|+..+ |..--.. +.+...+.. ......+.++..++|..+..++ . +|--.. .++.+.... ++....++
T Consensus 345 ~~W~~~~--g~~~~~~g~~h~nqI~~-~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~---~lav~~d~~ 418 (603)
T KOG0318|consen 345 NSWDSGS--GTSDRLAGKGHTNQIKG-MAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPK---GLAVLSDGG 418 (603)
T ss_pred EEEecCC--ccccccccccccceEEE-EeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCce---eEEEcCCCC
Confidence 9999776 4322111 112221111 1222347888889999998887 3 221100 012222111 11233343
Q ss_pred eEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccc
Q 002615 771 QVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQS 850 (900)
Q Consensus 771 ~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~ 850 (900)
.+++.+.++ |..+.-.++- .+.+..-...+.+ ..+++..+++|..||+|++|....+...
T Consensus 419 ~avv~~~~~-iv~l~~~~~~--~~~~~~y~~s~vA------------v~~~~~~vaVGG~Dgkvhvysl~g~~l~----- 478 (603)
T KOG0318|consen 419 TAVVACISD-IVLLQDQTKV--SSIPIGYESSAVA------------VSPDGSEVAVGGQDGKVHVYSLSGDELK----- 478 (603)
T ss_pred EEEEEecCc-EEEEecCCcc--eeeccccccceEE------------EcCCCCEEEEecccceEEEEEecCCccc-----
Confidence 555555544 6666533332 2222221111111 1234889999999999999998865221
Q ss_pred cccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEEcccccc
Q 002615 851 KDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
.+....+..+.+ +...+ ++.+|..|...+.+..||..+.+.
T Consensus 479 -----ee~~~~~h~a~i-T~vaySpd~~yla~~Da~rkvv~yd~~s~~~ 521 (603)
T KOG0318|consen 479 -----EEAKLLEHRAAI-TDVAYSPDGAYLAAGDASRKVVLYDVASREV 521 (603)
T ss_pred -----ceeeeecccCCc-eEEEECCCCcEEEEeccCCcEEEEEcccCce
Confidence 111112222221 21222 456777778889999999888765
No 166
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.48 E-value=7.1e-11 Score=125.67 Aligned_cols=193 Identities=13% Similarity=0.132 Sum_probs=150.2
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCC--ceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCG--EVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~--~~~~ 633 (900)
+++++|..+-+|.|.-||+.+++.+..+...+....++++.+.+..+.+||.||.++.++...+++.......- .-.-
T Consensus 79 e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvL 158 (691)
T KOG2048|consen 79 EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVL 158 (691)
T ss_pred cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEE
Confidence 58899999999999999999999998888777667788888888899999999999999999998877654432 2223
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc--C------Cc-cccCceeeccCCEEEEEeCCCcEEEEEcCCCC
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC--G------GS-IFGSPAIDEVHDVLYVASTSGRLTAISVKALP 704 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~--~------~~-~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~ 704 (900)
+..+.+++..|+.|+.||.|.+||.+++..+...+. . .. +++-..+. .+.|..|...|.+.-||...
T Consensus 159 slsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr--d~tI~sgDS~G~V~FWd~~~-- 234 (691)
T KOG2048|consen 159 SLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR--DSTIASGDSAGTVTFWDSIF-- 234 (691)
T ss_pred EEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee--cCcEEEecCCceEEEEcccC--
Confidence 344555555699999999999999999988773222 1 11 23333343 48899999999999999888
Q ss_pred ceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeee
Q 002615 705 FHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRC 752 (900)
Q Consensus 705 g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~ 752 (900)
|..+..+..+.....+.+...+++++++++.|+.+.-|. .+++--|..
T Consensus 235 gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~ 283 (691)
T KOG2048|consen 235 GTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVI 283 (691)
T ss_pred cchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceee
Confidence 888888877776667777777889999999999999998 433223644
No 167
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.47 E-value=8.1e-13 Score=134.76 Aligned_cols=270 Identities=11% Similarity=0.076 Sum_probs=180.8
Q ss_pred CCCEEEEEeeCCEEEEEECCC-CcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccC
Q 002615 598 DFSQVVVGCYKGKIYFLDYLT-GDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGS 676 (900)
Q Consensus 598 ~~~~i~vg~~dg~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~ 676 (900)
.+..+..++.|+.|+.||.-+ ++.+-+|..+...+....+...+..+.++++|+.+..||.+||+++-++..+......
T Consensus 226 ~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cv 305 (503)
T KOG0282|consen 226 KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCV 305 (503)
T ss_pred eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceee
Confidence 444677788999999999876 8888888887766666677777788999999999999999999999999876544332
Q ss_pred ceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC
Q 002615 677 PAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 677 ~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~ 755 (900)
-.-.++.+.+++|+.++.|..||.++ |+++..+..+.....+..+...+.+.+..+.++.+.+|+ ..+-.+ ++...
T Consensus 306 kf~pd~~n~fl~G~sd~ki~~wDiRs--~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~i-k~i~~ 382 (503)
T KOG0282|consen 306 KFHPDNQNIFLVGGSDKKIRQWDIRS--GKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPI-KNIAD 382 (503)
T ss_pred ecCCCCCcEEEEecCCCcEEEEeccc--hHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccc-hhhcc
Confidence 22222247889999999999999998 998888777666666777777788888888888888887 444332 22223
Q ss_pred CceeccccccccCCCeEE-EEeeCCeEEEEeCCCCceeeEEe-c-CCceecccccccccccccccccCCCeEEEEEcCCC
Q 002615 756 GPIFAGPCTSFALPSQVL-ICSRNGSIYSFEQESGNLLWEYS-V-GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSG 832 (900)
Q Consensus 756 ~~~~~~~~~~~~~~~~l~-~g~~dg~l~~~d~~tG~~~w~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G 832 (900)
....+.||+....++..+ .-+.|+.+++|....--..-..+ . +..+...++- -...+++++|+.|..+|
T Consensus 383 ~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~--------v~fSpDG~~l~SGdsdG 454 (503)
T KOG0282|consen 383 PEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQ--------VDFSPDGRTLCSGDSDG 454 (503)
T ss_pred hhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceee--------EEEcCCCCeEEeecCCc
Confidence 334566665544444444 44778889998743211111100 0 1111000100 11244599999999999
Q ss_pred cEEEEEeecCcccccccccccceeeeeeeccCCccccCceee---CCEEEEeeeCCeEEEEE
Q 002615 833 SIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI---GGRVFVGCRDDYIYCIA 891 (900)
Q Consensus 833 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~---~~~l~vg~~dg~l~~ld 891 (900)
.++.||.++- +++...+.+.........+ ...|..++.+|.|+.||
T Consensus 455 ~v~~wdwkt~-------------kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 455 KVNFWDWKTT-------------KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cEEEeechhh-------------hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9999998754 3333333332222211111 36788888999999885
No 168
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.45 E-value=1.4e-12 Score=133.11 Aligned_cols=268 Identities=10% Similarity=0.048 Sum_probs=182.0
Q ss_pred CceEEEEecCCCeEEEEECCC-CcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 556 SDIYLFVGSHSHKFICADAKR-SSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
....+..++.|+.|+.||..+ ++++..+..+......+.++.++..+..+++|+.|..||.+||+.+-++..+....+.
T Consensus 226 ~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cv 305 (503)
T KOG0282|consen 226 KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCV 305 (503)
T ss_pred eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceee
Confidence 356678889999999999877 8888888877776667889999999999999999999999999999998876554443
Q ss_pred eeEeCCC-CEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 635 PVVDAPR-QLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 635 ~~~~~~~-~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
. +.+++ +.+++|..|+.|..||..+|+++..+.-+-..+....+-+.+.+.+..+.++.+.+|+... .-.+... .
T Consensus 306 k-f~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~--~v~ik~i-~ 381 (503)
T KOG0282|consen 306 K-FHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRI--PVPIKNI-A 381 (503)
T ss_pred e-cCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCC--Cccchhh-c
Confidence 3 33444 7788999999999999999998877765433344444555466777778888888888664 3222211 1
Q ss_pred CCcceeee--eeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec-CCCce---eccccccccCCCeEEEEeeCCeEEEEeC
Q 002615 714 EVPAFASL--CITSANRHVICCLVDGHVVALD-SSGSIIWRCR-TGGPI---FAGPCTSFALPSQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 714 ~~~~~~s~--~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~-~~~~~---~~~~~~~~~~~~~l~~g~~dg~l~~~d~ 786 (900)
....++.+ ...+.++.+.+-+.++.+++|. ..--.+-..+ ..+.. ++..+-...+++.|..|+.+|.++.||-
T Consensus 382 ~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 382 DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 11112222 3344566666667788888886 2111110000 01111 1111112234668999999999999999
Q ss_pred CCCceeeEEecCCce-ecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 787 ESGNLLWEYSVGDPI-TASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 787 ~tG~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
++-++.-+.+.+... +...+... ....+++|+.+|.|.+|+
T Consensus 462 kt~kl~~~lkah~~~ci~v~wHP~-----------e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 462 KTTKLVSKLKAHDQPCIGVDWHPV-----------EPSKVATCGWDGLIKIWD 503 (503)
T ss_pred hhhhhhhccccCCcceEEEEecCC-----------CcceeEecccCceeEecC
Confidence 998887777666433 33222221 156788888999999985
No 169
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.45 E-value=3.5e-10 Score=120.56 Aligned_cols=265 Identities=12% Similarity=0.125 Sum_probs=168.2
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEE-EeeCCEEEEEECCCCcEEEEEecCCceeeeeeEe
Q 002615 560 LFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVV-GCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVD 638 (900)
Q Consensus 560 v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~v-g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 638 (900)
++.++.++.++.||..+++.+..+..+..+ .+..+++++..+|+ ++.++.|+.||..+|+....+..+... ....+.
T Consensus 4 ~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~-~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~ 81 (300)
T TIGR03866 4 YVSNEKDNTISVIDTATLEVTRTFPVGQRP-RGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDP-ELFALH 81 (300)
T ss_pred EEEecCCCEEEEEECCCCceEEEEECCCCC-CceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCc-cEEEEC
Confidence 345667899999999999988877765543 35677888877765 456789999999999887666544333 234566
Q ss_pred CCCCEEEEec-CCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC-cEEEEEcCCCCceeeeEeecCCc
Q 002615 639 APRQLIWCGS-HDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG-RLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 639 ~~~~~i~~gs-~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g-~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
++++.+|+++ .++.++.||..+++.+..+..+... ....+.+++..+++++.++ .++.+|.++ ++..........
T Consensus 82 ~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~dg~~l~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 158 (300)
T TIGR03866 82 PNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEP-EGMAVSPDGKIVVNTSETTNMAHFIDTKT--YEIVDNVLVDQR 158 (300)
T ss_pred CCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCc-ceEEECCCCCEEEEEecCCCeEEEEeCCC--CeEEEEEEcCCC
Confidence 6667777764 5789999999998887776543322 3345555566777776654 356678776 665544332222
Q ss_pred ceeeeeeeeCCCEEEEEe-ecCcEEEEC-CCCCEEeeecCCCce----eccc-ccccc-CCCeEEEE-eeCCeEEEEeCC
Q 002615 717 AFASLCITSANRHVICCL-VDGHVVALD-SSGSIIWRCRTGGPI----FAGP-CTSFA-LPSQVLIC-SRNGSIYSFEQE 787 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~-~~g~v~~~d-~~G~~~w~~~~~~~~----~~~~-~~~~~-~~~~l~~g-~~dg~l~~~d~~ 787 (900)
. ....+..++..+++++ .++.+..|| .+++.+-++....+. ...+ .+... .+..+|++ ..++.+..||.+
T Consensus 159 ~-~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~ 237 (300)
T TIGR03866 159 P-RFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAK 237 (300)
T ss_pred c-cEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECC
Confidence 1 2344556677776665 478999999 777765433211100 0001 11112 23455665 346679999999
Q ss_pred CCceeeEEecCCceecccccccccccccccccCCCeEEEEE-cCCCcEEEEEeecC
Q 002615 788 SGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCIC-TSSGSIHILRVNLD 842 (900)
Q Consensus 788 tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~G~v~~~d~~~~ 842 (900)
++++.-....+..+.... + .+++..++++ ..+|.|.+||.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~-----------~~~g~~l~~~~~~~~~i~v~d~~~~ 281 (300)
T TIGR03866 238 TYEVLDYLLVGQRVWQLA-F-----------TPDEKYLLTTNGVSNDVSVIDVAAL 281 (300)
T ss_pred CCcEEEEEEeCCCcceEE-E-----------CCCCCEEEEEcCCCCeEEEEECCCC
Confidence 988765443333322221 1 2236778876 45899999999876
No 170
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.44 E-value=5.1e-12 Score=126.80 Aligned_cols=269 Identities=8% Similarity=-0.015 Sum_probs=204.3
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecC--CCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLAD--FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~--~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
++..+..||.+|.+..|+..++..+-.+..+..-...+.+.+. +..+..++.||.+..|+..+-..+-.+..+..-++
T Consensus 186 ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs 265 (459)
T KOG0272|consen 186 DSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVS 265 (459)
T ss_pred CCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhhe
Confidence 5677888999999999999999888777777654455566654 44789999999999999877777777766666667
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
...+.+++..+.++++|.+-..||..++..+-....+..-..+.++..++..+..|+.|..=..||+.+ |..+-....
T Consensus 266 ~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRt--gr~im~L~g 343 (459)
T KOG0272|consen 266 RVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRT--GRCIMFLAG 343 (459)
T ss_pred eeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeeccc--CcEEEEecc
Confidence 778899999999999999999999999887765555555556666777666777777888778899998 988888777
Q ss_pred CCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCcee
Q 002615 714 EVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLL 792 (900)
Q Consensus 714 ~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~ 792 (900)
+...+.+..+.+.+-.+..|+.|+.+.+|| ..-..+++++...++.+..+.....+..|..+++|+.+..|...+.+++
T Consensus 344 H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ 423 (459)
T KOG0272|consen 344 HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPL 423 (459)
T ss_pred cccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccc
Confidence 777677888888877888999999999999 6555667766555544443333334557888899999999999988877
Q ss_pred eEEecCCc-eecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 793 WEYSVGDP-ITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 793 w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
-+..-+.. +.+.-+.. ++..++.++.|.++..|.
T Consensus 424 ksLaGHe~kV~s~Dis~------------d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 424 KSLAGHEGKVISLDISP------------DSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhhcCCccceEEEEecc------------CCceEEEeccCceeeecc
Confidence 66544433 33322222 267788888888888774
No 171
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.44 E-value=1.4e-10 Score=139.80 Aligned_cols=282 Identities=10% Similarity=0.049 Sum_probs=174.6
Q ss_pred eeCCceEEEEecCCCeEEEEECCCC----c----EEEEEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEE
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRS----S----VLWEIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYW 623 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG----~----~~w~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w 623 (900)
+..++..+.+|+.|+.|+.||..+. . ..........+ .+.++.+ .+..+++++.||.|..||..+++.+.
T Consensus 491 fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v-~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~ 569 (793)
T PLN00181 491 FDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKL-SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVT 569 (793)
T ss_pred ECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCce-eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 3345677889999999999997542 1 11111212222 2334443 35688999999999999999999888
Q ss_pred EEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 624 TFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 624 ~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
.+..+........+.+ ++..+++|+.|+.+..||..++.++..+.....+.+.....+.+..+.+|+.+|.++.||..+
T Consensus 570 ~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~ 649 (793)
T PLN00181 570 EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRN 649 (793)
T ss_pred EecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 7766655455555653 456789999999999999999888766654433332222233457889999999999999876
Q ss_pred CCce-eeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCC------CEEeeecCCCceeccccccccCCCeEEE
Q 002615 703 LPFH-TLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSG------SIIWRCRTGGPIFAGPCTSFALPSQVLI 774 (900)
Q Consensus 703 ~~g~-~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G------~~~w~~~~~~~~~~~~~~~~~~~~~l~~ 774 (900)
++ .+.....+........+. ++..+++++.|+.+..|| ..+ +.+..+........... ....++.|.+
T Consensus 650 --~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~-~s~~~~~las 725 (793)
T PLN00181 650 --PKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVG-LSVSDGYIAT 725 (793)
T ss_pred --CCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEE-EcCCCCEEEE
Confidence 43 233333333333344443 567889999999999999 532 33333332111111000 1123567888
Q ss_pred EeeCCeEEEEeCCCCceeeEEecCCc--eecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 775 CSRNGSIYSFEQESGNLLWEYSVGDP--ITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 775 g~~dg~l~~~d~~tG~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
|+.||.++.|+...+...|.+..... ............+........+..+++|+.+|.|.+|+.
T Consensus 726 gs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 726 GSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 99999999999888877765543211 100000000000000111234778999999999999974
No 172
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.44 E-value=2.1e-11 Score=135.37 Aligned_cols=265 Identities=14% Similarity=0.104 Sum_probs=188.8
Q ss_pred CCEEEEEeeCCEEEEEECCCCcEEEE-EecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCc
Q 002615 599 FSQVVVGCYKGKIYFLDYLTGDIYWT-FQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSP 677 (900)
Q Consensus 599 ~~~i~vg~~dg~l~~~d~~tG~~~w~-~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~ 677 (900)
++++..|+.+..|..||..+|..+-. +..+........+...+++++.|+.|.++..||..+|++...+..+.......
T Consensus 218 ~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~ 297 (537)
T KOG0274|consen 218 DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCL 297 (537)
T ss_pred cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEE
Confidence 45799999999999999999988766 55444433334444346889999999999999999999999887655544444
Q ss_pred eeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC
Q 002615 678 AIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG 756 (900)
Q Consensus 678 ~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~ 756 (900)
.+.+ ..+..|+.|..+.+|+..+ +..+-....+..... ++..+++.+++|+.|+.|.+|| .+++.+...+...
T Consensus 298 ~~~~--~~~~sgs~D~tVkVW~v~n--~~~l~l~~~h~~~V~--~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~ 371 (537)
T KOG0274|consen 298 TIDP--FLLVSGSRDNTVKVWDVTN--GACLNLLRGHTGPVN--CVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHT 371 (537)
T ss_pred EccC--ceEeeccCCceEEEEeccC--cceEEEeccccccEE--EEEecCCEEEEEecCceEEEEEhhhceeeeeecCCc
Confidence 3332 5666678999999999998 877766654332222 3334588999999999999999 8899887765422
Q ss_pred -ceeccccccccCCCeEEEEeeCCeEEEEeCCCC-ceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcE
Q 002615 757 -PIFAGPCTSFALPSQVLICSRNGSIYSFEQESG-NLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSI 834 (900)
Q Consensus 757 -~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v 834 (900)
.+.+. .....+.++.|+.|+.|..||..++ +.+-.+..+....... ...+..+..++.||.|
T Consensus 372 ~~V~sl---~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l-------------~~~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 372 GRVYSL---IVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL-------------LLRDNFLVSSSADGTI 435 (537)
T ss_pred ceEEEE---EecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccc-------------ccccceeEeccccccE
Confidence 22222 1222278999999999999999998 6666665554443221 2227888999999999
Q ss_pred EEEEeecCcccccccccccceeeeeeeccC-CccccCceeeCCEEEEeeeCCeEEEEEccccccc
Q 002615 835 HILRVNLDVTGKENQSKDHMVQEFAKLELQ-GDIFSSPVMIGGRVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 835 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ss~~~~~~~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
.+||..++ +....++-+ -..++.....+..++.++.++.++.||+.++++.
T Consensus 436 k~WD~~~~-------------~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~~~ 487 (537)
T KOG0274|consen 436 KLWDAEEG-------------ECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGTLI 487 (537)
T ss_pred EEeecccC-------------ceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCchh
Confidence 99999876 333333321 1122222222578999999999999999998864
No 173
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.44 E-value=1.3e-12 Score=126.02 Aligned_cols=237 Identities=14% Similarity=0.177 Sum_probs=176.3
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEe--cC------CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQ--TC------GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC 663 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~--~~------~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~ 663 (900)
++.+++|+++++.|+.||.|-+||..+|++....+ .. +...-+..++.+...+..|+.||.+..|...+|.|
T Consensus 218 cA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~C 297 (508)
T KOG0275|consen 218 CARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQC 297 (508)
T ss_pred heeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchH
Confidence 67899999999999999999999999999865322 21 12223344555677889999999999999999999
Q ss_pred EEeec-cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEE
Q 002615 664 VYKLP-CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVAL 742 (900)
Q Consensus 664 ~w~~~-~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~ 742 (900)
+.+++ .+..-..+..++.++..++.++.+..+..--+++ |+.+..+..+........+..++..++.++.||.+.+|
T Consensus 298 lRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS--GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW 375 (508)
T KOG0275|consen 298 LRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKS--GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVW 375 (508)
T ss_pred HHHhhhhhccCeeEEEEccCcchhhcccccceEEEecccc--chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEe
Confidence 99886 3433444555666667888899998888877777 99888777766655566677888999999999999999
Q ss_pred C-CCCCEEeeecCCCceeccccc--cccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCc----eeccccccccccccc
Q 002615 743 D-SSGSIIWRCRTGGPIFAGPCT--SFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDP----ITASAYIDEHLQLKL 815 (900)
Q Consensus 743 d-~~G~~~w~~~~~~~~~~~~~~--~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~----~~~~~~~~~~~~~~~ 815 (900)
+ ++++.+-+++..+.-+....+ .......++++...+++|..+. .|+++.++..+.. .....
T Consensus 376 ~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~---------- 444 (508)
T KOG0275|consen 376 HGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAI---------- 444 (508)
T ss_pred cCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEE----------
Confidence 9 888887776654432222211 1223456888888899999995 5888887765432 22221
Q ss_pred ccccCCCeEEEEEcCCCcEEEEEeecCc
Q 002615 816 ESCLSIDRLVCICTSSGSIHILRVNLDV 843 (900)
Q Consensus 816 ~~~~~~~~~l~~g~~~G~v~~~d~~~~~ 843 (900)
..+.+.++|+..+|+.+|+|...+|.
T Consensus 445 --lSpkGewiYcigED~vlYCF~~~sG~ 470 (508)
T KOG0275|consen 445 --LSPKGEWIYCIGEDGVLYCFSVLSGK 470 (508)
T ss_pred --ecCCCcEEEEEccCcEEEEEEeecCc
Confidence 22348999999999999999998773
No 174
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=3.5e-10 Score=110.13 Aligned_cols=242 Identities=14% Similarity=0.113 Sum_probs=169.4
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee--CCEEEEEECCCCcEEEEEecCCc
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY--KGKIYFLDYLTGDIYWTFQTCGE 630 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~--dg~l~~~d~~tG~~~w~~~~~~~ 630 (900)
+++.+..+.+.++|..|..||..+|++.-.+....--...+++......+..++. |..|..+++.+.+.+-.|..+..
T Consensus 22 fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~ 101 (311)
T KOG1446|consen 22 FSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKK 101 (311)
T ss_pred ecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCc
Confidence 4456777777788889999999999998877655322234566655556666665 77899999999999999988888
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEE-EeCCCcEEEEEcCCCCceeee
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYV-ASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v-~t~~g~l~~~~~~~~~g~~~w 709 (900)
.+....+.+.+..++.++.|++++.||++..++.-.....+. ..+++++ .|.+++ +.....|..||.+.-...+.-
T Consensus 102 ~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp-~GLifA~~~~~~~IkLyD~Rs~dkgPF~ 178 (311)
T KOG1446|consen 102 RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDP-EGLIFALANGSELIKLYDLRSFDKGPFT 178 (311)
T ss_pred eEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECC-CCcEEEEecCCCeEEEEEecccCCCCce
Confidence 777777777778899999999999999987776655544333 2345666 344444 444447888998763333443
Q ss_pred EeecC---CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceec--cccccccCCCeEEEEeeCCeEEE
Q 002615 710 LHELE---VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFA--GPCTSFALPSQVLICSRNGSIYS 783 (900)
Q Consensus 710 ~~~~~---~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~--~~~~~~~~~~~l~~g~~dg~l~~ 783 (900)
.+... ........++++++.+.+++..+.++.+| -+|.++-.++....-.. ..+...-....|+.|+.||+|++
T Consensus 179 tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~v 258 (311)
T KOG1446|consen 179 TFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHV 258 (311)
T ss_pred eEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEE
Confidence 33333 22234556778899999999999999999 89998766653322111 11111223456788888899999
Q ss_pred EeCCCCceeeEEec
Q 002615 784 FEQESGNLLWEYSV 797 (900)
Q Consensus 784 ~d~~tG~~~w~~~~ 797 (900)
|+.++|+.+-....
T Consensus 259 w~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 259 WNLETGKKVAVLRG 272 (311)
T ss_pred EEcCCCcEeeEecC
Confidence 99999988755543
No 175
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.43 E-value=3e-11 Score=127.40 Aligned_cols=214 Identities=17% Similarity=0.303 Sum_probs=144.9
Q ss_pred ccccccccccccccc--c--------cccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCc--ee----ece
Q 002615 530 RGFIQELWKVHMESC--V--------DASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR--IE----CSA 593 (900)
Q Consensus 530 ~~~~~~~W~~~~~~~--v--------~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~--~~----~~~ 593 (900)
-..+++.|++++|.. - ..+|+.+ ++.+|+.+....++++|+.||+++|+++.... +. +|-
T Consensus 181 V~nL~~AWty~TGD~k~~~d~~e~t~e~tPLkv----gdtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCr 256 (773)
T COG4993 181 VGNLQVAWTYRTGDVKQPEDPGETTNEVTPLKV----GDTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCR 256 (773)
T ss_pred hhccceeEEEecCcccCCCCcccccccccceEE----CCEEEEecCcceeEEeeccCCceeeecCCCCCCCccccccccc
Confidence 457889999998743 1 2378874 88999999888899999999999999864321 10 010
Q ss_pred ----------eEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee----------------eeeeEeCCCCEEEEe
Q 002615 594 ----------AVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK----------------CQPVVDAPRQLIWCG 647 (900)
Q Consensus 594 ----------~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~----------------~~~~~~~~~~~i~~g 647 (900)
.-+++..+||..+.|..|.++|.+||++.|.|..++... +.+.+. ..+.|+.|
T Consensus 257 gVsy~~a~a~~k~pc~~rIflpt~DarlIALdA~tGkvc~~Fa~~Ga~~l~tgm~~~k~g~y~~tS~p~~~-~~~~v~~g 335 (773)
T COG4993 257 GVSYGAAKADAKSPCPRRIFLPTADARLIALDADTGKVCWSFANKGALNLETGMKDTKDGLYYGTSPPEFG-VKGIVIAG 335 (773)
T ss_pred ceecccccccccCCCceeEEeecCCceEEEEeCCCCcEeheeccCceeeeeccCCCCCCCeEeecCCCccc-ceeEEEee
Confidence 112344569999999999999999999999987655322 112222 22333333
Q ss_pred cC---------CCeEEEEECCCCeEEEeeccC------------------CccccCceeeccCCEEEEEeCC--------
Q 002615 648 SH---------DHNLYALDFRNYRCVYKLPCG------------------GSIFGSPAIDEVHDVLYVASTS-------- 692 (900)
Q Consensus 648 s~---------dg~l~~~d~~~g~~~w~~~~~------------------~~~~~~~~~~~~~~~l~v~t~~-------- 692 (900)
+- .+.+..+|..+|+.+|..+.+ .+.+++..++.+-+.+|++..+
T Consensus 336 ~v~Dn~st~e~sgVir~fdv~tG~l~w~~D~gnpD~t~p~~~g~tyt~nspn~W~~~SyD~~lnlVy~p~Gn~~pd~wg~ 415 (773)
T COG4993 336 SVADNESTWEPSGVIRGFDVLTGKLTWAGDPGNPDPTAPTAPGQTYTRNSPNSWASASYDAKLNLVYVPMGNQTPDTWGG 415 (773)
T ss_pred ccCCCceeeccCccccccccccCceEEccCCCCCCCCCCCCCCceeecCCCCcccccccCCCCCeEEEeCCCCChhhccC
Confidence 21 245778888999999987653 2456667777777889987532
Q ss_pred ----------CcEEEEEcCCCCceeeeEeecCCcce------eeee---eeeCCC---EEEEEeecCcEEEEC-CCCCEE
Q 002615 693 ----------GRLTAISVKALPFHTLWLHELEVPAF------ASLC---ITSANR---HVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 693 ----------g~l~~~~~~~~~g~~~w~~~~~~~~~------~s~~---~~~~~~---~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
..+.++|+++ |+..|.++.-.... .-+. +..++. -++..+.+|.+|++| .+|+++
T Consensus 416 trtp~dekysssivAlD~~T--G~~kW~yQtvhhDlWDmDvp~qp~L~D~~~DG~~vpalv~ptk~G~~YVlDRrtGe~l 493 (773)
T COG4993 416 TRTPGDEKYSSSIVALDATT--GKLKWVYQTVHHDLWDMDVPAQPTLLDITKDGKVVPALVHPTKNGFIYVLDRRTGELL 493 (773)
T ss_pred CCCcccccccceeEEecCCC--cceeeeeeccCcchhcccCCCCceEEEeecCCcEeeeeecccccCcEEEEEcCCCccc
Confidence 3588899998 99999887543211 1111 112222 245567789999999 899876
Q ss_pred e
Q 002615 750 W 750 (900)
Q Consensus 750 w 750 (900)
-
T Consensus 494 v 494 (773)
T COG4993 494 V 494 (773)
T ss_pred c
Confidence 3
No 176
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.41 E-value=2.3e-10 Score=109.15 Aligned_cols=265 Identities=12% Similarity=0.081 Sum_probs=180.6
Q ss_pred CCCEEEEEeeCCEEEEEEC-----CCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc
Q 002615 598 DFSQVVVGCYKGKIYFLDY-----LTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS 672 (900)
Q Consensus 598 ~~~~i~vg~~dg~l~~~d~-----~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~ 672 (900)
+.+.++.++.|..+..|++ +.|.++..+..+.......++..+++..+.+++|+.+..||..+|+...++..+..
T Consensus 27 ~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~ 106 (315)
T KOG0279|consen 27 NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK 106 (315)
T ss_pred CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCC
Confidence 3345667777888888864 34667777777777777777787888999999999999999999999988888777
Q ss_pred cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC--CcceeeeeeeeC--CCEEEEEeecCcEEEEC-CCCC
Q 002615 673 IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE--VPAFASLCITSA--NRHVICCLVDGHVVALD-SSGS 747 (900)
Q Consensus 673 ~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~--~~~~~s~~~~~~--~~~i~~~~~~g~v~~~d-~~G~ 747 (900)
..-+..++.++..|+.|+.|..+..||.. |....+.... ....+...+.+. +-.|+.++.|+.+-++| .+-+
T Consensus 107 dVlsva~s~dn~qivSGSrDkTiklwnt~---g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~ 183 (315)
T KOG0279|consen 107 DVLSVAFSTDNRQIVSGSRDKTIKLWNTL---GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ 183 (315)
T ss_pred ceEEEEecCCCceeecCCCcceeeeeeec---ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc
Confidence 77777888878889999999999999987 4555554433 344455555555 56788889999999999 6555
Q ss_pred EEeeecCCCceeccccccccCCC-eEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEE
Q 002615 748 IIWRCRTGGPIFAGPCTSFALPS-QVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVC 826 (900)
Q Consensus 748 ~~w~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 826 (900)
+...+.......... ....|| .+..|..||.++.||...|+-+.++.....+.+..|.. +.+..
T Consensus 184 l~~~~~gh~~~v~t~--~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fsp-------------nrywL 248 (315)
T KOG0279|consen 184 LRTTFIGHSGYVNTV--TVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSP-------------NRYWL 248 (315)
T ss_pred hhhccccccccEEEE--EECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecC-------------CceeE
Confidence 544333222222111 122244 45557889999999999999887777666555444332 33333
Q ss_pred EEcCCCcEEEEEeecCcccccccccccceeeeeeeccCC--------cc-ccCcee--eCCEEEEeeeCCeEEEEEcc
Q 002615 827 ICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQG--------DI-FSSPVM--IGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 827 ~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~-~ss~~~--~~~~l~vg~~dg~l~~ld~~ 893 (900)
++..+-.|.+||..++. .+..+++.. +. --+.+. ++..||.|-.|+.|..|...
T Consensus 249 ~~at~~sIkIwdl~~~~-------------~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 249 CAATATSIKIWDLESKA-------------VVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eeccCCceEEEeccchh-------------hhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 33444559999998662 222222111 11 112222 36789999999999888653
No 177
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.40 E-value=1.6e-11 Score=123.27 Aligned_cols=273 Identities=11% Similarity=0.028 Sum_probs=203.4
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCC--CCEEEEecCCCeEEEEECCCCeEEEeec
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAP--RQLIWCGSHDHNLYALDFRNYRCVYKLP 668 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~--~~~i~~gs~dg~l~~~d~~~g~~~w~~~ 668 (900)
..+.++.++..++.|+.+|.+..|+..++..+-++..+..-.....+.+. +..+.+++.||.+..|+..+-.++-.+.
T Consensus 179 s~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~ 258 (459)
T KOG0272|consen 179 SGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLE 258 (459)
T ss_pred eeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhh
Confidence 35667788889999999999999999999888888777665566666654 4578999999999999988877777777
Q ss_pred cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCC
Q 002615 669 CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGS 747 (900)
Q Consensus 669 ~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~ 747 (900)
.+..-.+...+.+++..|..++.|..-..||+.+ ++.+-..+.+.....+.++..++..+..|+.|..-.+|| .+|.
T Consensus 259 gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~t--k~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr 336 (459)
T KOG0272|consen 259 GHLARVSRVAFHPSGKFLGTASFDSTWRLWDLET--KSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR 336 (459)
T ss_pred cchhhheeeeecCCCceeeecccccchhhccccc--chhhHhhcccccccceeEecCCCceeeccCccchhheeecccCc
Confidence 6666677788888888899999999999999998 776666666666667888888888888898888888999 8998
Q ss_pred EEeeecC-CCceeccccccccCCC-eEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEE
Q 002615 748 IIWRCRT-GGPIFAGPCTSFALPS-QVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLV 825 (900)
Q Consensus 748 ~~w~~~~-~~~~~~~~~~~~~~~~-~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 825 (900)
.+-.+.. ..++++.. ...+| .|..|+.|+...+||...-+.+.++..+.+.++...+.. ..+.++
T Consensus 337 ~im~L~gH~k~I~~V~---fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p----------~~g~fL 403 (459)
T KOG0272|consen 337 CIMFLAGHIKEILSVA---FSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSP----------QEGYFL 403 (459)
T ss_pred EEEEecccccceeeEe---ECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecc----------cCCeEE
Confidence 7765543 33455544 33344 577788999999999988888888877777666554432 238899
Q ss_pred EEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEE
Q 002615 826 CICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIA 891 (900)
Q Consensus 826 ~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld 891 (900)
..++.|+.+.+|...+. +...+..-+..-+.+.-+ ++..+..++.|..+..|.
T Consensus 404 ~TasyD~t~kiWs~~~~-------------~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 404 VTASYDNTVKIWSTRTW-------------SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEcccCcceeeecCCCc-------------ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999999999987654 222222222222223333 234566677788777664
No 178
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.39 E-value=2.8e-10 Score=137.26 Aligned_cols=285 Identities=8% Similarity=0.042 Sum_probs=172.0
Q ss_pred ceeeceeEecCCCEEEEEeeCCEEEEEECCCC----c----EEEEEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEEC
Q 002615 588 RIECSAAVLADFSQVVVGCYKGKIYFLDYLTG----D----IYWTFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDF 658 (900)
Q Consensus 588 ~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG----~----~~w~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~ 658 (900)
...++..+++++.++++|+.|+.|+.||..+. . ..........+ ....+.. .+..|++++.||.+..||.
T Consensus 484 ~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v-~~l~~~~~~~~~las~~~Dg~v~lWd~ 562 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKL-SGICWNSYIKSQVASSNFEGVVQVWDV 562 (793)
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCce-eeEEeccCCCCEEEEEeCCCeEEEEEC
Confidence 33456788889889999999999999996542 1 11111112222 2223332 3567889999999999999
Q ss_pred CCCeEEEeeccCCccccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeee-eeCCCEEEEEeec
Q 002615 659 RNYRCVYKLPCGGSIFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCI-TSANRHVICCLVD 736 (900)
Q Consensus 659 ~~g~~~w~~~~~~~~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~-~~~~~~i~~~~~~ 736 (900)
.+++.+..+..+.....+..+.+ ++..|+.++.+|.+..||+.+ +..+-........ .+..+ ..++..+++|+.+
T Consensus 563 ~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~--~~~~~~~~~~~~v-~~v~~~~~~g~~latgs~d 639 (793)
T PLN00181 563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ--GVSIGTIKTKANI-CCVQFPSESGRSLAFGSAD 639 (793)
T ss_pred CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC--CcEEEEEecCCCe-EEEEEeCCCCCEEEEEeCC
Confidence 99998887766554444455543 346788899999999999987 6665555443322 22233 2346678889999
Q ss_pred CcEEEEC-CCCCE-EeeecC-CCceeccccccccCCCeEEEEeeCCeEEEEeCCCC------ceeeEEecCCceeccccc
Q 002615 737 GHVVALD-SSGSI-IWRCRT-GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG------NLLWEYSVGDPITASAYI 807 (900)
Q Consensus 737 g~v~~~d-~~G~~-~w~~~~-~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG------~~~w~~~~~~~~~~~~~~ 807 (900)
|.|+.|| .+++. +..... ...+... ....++.++.++.|+.|..||..++ +.+.++..+........+
T Consensus 640 g~I~iwD~~~~~~~~~~~~~h~~~V~~v---~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~ 716 (793)
T PLN00181 640 HKVYYYDLRNPKLPLCTMIGHSKTVSYV---RFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGL 716 (793)
T ss_pred CeEEEEECCCCCccceEecCCCCCEEEE---EEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEE
Confidence 9999999 66542 222221 1222222 1234567889999999999998753 233333322221111111
Q ss_pred ccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeee--eccCCccccCcee--eCCEEEEeee
Q 002615 808 DEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAK--LELQGDIFSSPVM--IGGRVFVGCR 883 (900)
Q Consensus 808 ~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~ss~~~--~~~~l~vg~~ 883 (900)
...++++++|+.||.|++|+......... +..... ..... ..-....+++... .+..|+.|+.
T Consensus 717 -----------s~~~~~lasgs~D~~v~iw~~~~~~~~~s-~~~~~~-~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~ 783 (793)
T PLN00181 717 -----------SVSDGYIATGSETNEVFVYHKAFPMPVLS-YKFKTI-DPVSGLEVDDASQFISSVCWRGQSSTLVAANS 783 (793)
T ss_pred -----------cCCCCEEEEEeCCCEEEEEECCCCCceEE-EecccC-CcccccccCCCCcEEEEEEEcCCCCeEEEecC
Confidence 22378999999999999999764311000 000000 00000 0011122333333 3468899999
Q ss_pred CCeEEEEEc
Q 002615 884 DDYIYCIAL 892 (900)
Q Consensus 884 dg~l~~ld~ 892 (900)
+|.|.+|+.
T Consensus 784 dG~I~i~~~ 792 (793)
T PLN00181 784 TGNIKILEM 792 (793)
T ss_pred CCcEEEEec
Confidence 999999985
No 179
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=9.2e-11 Score=113.50 Aligned_cols=235 Identities=14% Similarity=0.130 Sum_probs=155.5
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
....+.|.++++||.+..||..+-..+-++..+..+. .+++.+ ...+|+|+.||.|..+|..+|.... ...+.....
T Consensus 22 ~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL-~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~-igth~~~i~ 98 (323)
T KOG1036|consen 22 SPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLL-DCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ-IGTHDEGIR 98 (323)
T ss_pred cCcCCcEEEEeccCcEEEEeccchhhhhheecCCcee-eeeccC-CceEEEeccCceEEEEEecCCccee-eccCCCceE
Confidence 3457889999999999999988777666676666653 445555 4689999999999999998887653 334444444
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
+.......+.++.|++|+.+..||+.+..+.-.+..++.+++.- -.+++|++|+.+..+..||+.+ -..-.+...
T Consensus 99 ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~---v~g~~LvVg~~~r~v~iyDLRn--~~~~~q~re 173 (323)
T KOG1036|consen 99 CIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMD---VSGNRLVVGTSDRKVLIYDLRN--LDEPFQRRE 173 (323)
T ss_pred EEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEe---ccCCEEEEeecCceEEEEEccc--ccchhhhcc
Confidence 44444557889999999999999998755554555555444433 2358999999999999999886 332222222
Q ss_pred CCcc--eeeeeeeeCCCEEEEEeecCcEEEEC-CCC----CEEeeec-----CCCc--eeccccccc-cCCCeEEEEeeC
Q 002615 714 EVPA--FASLCITSANRHVICCLVDGHVVALD-SSG----SIIWRCR-----TGGP--IFAGPCTSF-ALPSQVLICSRN 778 (900)
Q Consensus 714 ~~~~--~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G----~~~w~~~-----~~~~--~~~~~~~~~-~~~~~l~~g~~d 778 (900)
..-. .-+.++.+.....++++.+|++.+-. ... +..+.++ ..+. ++....+.+ -..++++.|..|
T Consensus 174 S~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsD 253 (323)
T KOG1036|consen 174 SSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSD 253 (323)
T ss_pred ccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCC
Confidence 1111 13445556667788888999988754 222 1222222 1111 111111111 125689999999
Q ss_pred CeEEEEeCCCCceeeEEe
Q 002615 779 GSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 779 g~l~~~d~~tG~~~w~~~ 796 (900)
|.|.+||+.+.+.+-++.
T Consensus 254 G~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 254 GIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred ceEEEccCcchhhhhhcc
Confidence 999999998877665543
No 180
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.39 E-value=1.7e-10 Score=117.53 Aligned_cols=273 Identities=14% Similarity=0.126 Sum_probs=186.1
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
++.....+|..+.+|.+||.+..|+ .+|.++-++..+.....+.-+...+.+|..++-|++...||..+|+....+...
T Consensus 239 T~L~Wn~~G~~LatG~~~G~~riw~-~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~ 317 (524)
T KOG0273|consen 239 TSLDWNNDGTLLATGSEDGEARIWN-KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFH 317 (524)
T ss_pred ceEEecCCCCeEEEeecCcEEEEEe-cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeec
Confidence 4566777889999999999999999 678777666655544444556666788999999999999999999988887765
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
....-.... -.++.+...+.+|.++.+.+.. ..+.-++..+..........+.+..+..++.|+++-.|+ .++.-.
T Consensus 318 s~~~lDVdW-~~~~~F~ts~td~~i~V~kv~~--~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~ 394 (524)
T KOG0273|consen 318 SAPALDVDW-QSNDEFATSSTDGCIHVCKVGE--DRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV 394 (524)
T ss_pred cCCccceEE-ecCceEeecCCCceEEEEEecC--CCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch
Confidence 433111111 1235566666788788776654 345555555555556666666677888899999998888 443222
Q ss_pred eeecCCC----ceecccc---ccc-cCCCeEEEEeeCCeEEEEeCCCCceeeEE-ecCCceecccccccccccccccccC
Q 002615 750 WRCRTGG----PIFAGPC---TSF-ALPSQVLICSRNGSIYSFEQESGNLLWEY-SVGDPITASAYIDEHLQLKLESCLS 820 (900)
Q Consensus 750 w~~~~~~----~~~~~~~---~~~-~~~~~l~~g~~dg~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (900)
..+.... .+..+|. ... ..+-.+..++.|+.|..||...|..+.++ +...++++..+..+
T Consensus 395 ~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~----------- 463 (524)
T KOG0273|consen 395 HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPN----------- 463 (524)
T ss_pred hhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCC-----------
Confidence 1111100 1112221 111 12335666788999999999999999887 56667777665554
Q ss_pred CCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEEcc
Q 002615 821 IDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 821 ~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~ 893 (900)
+.+++.|+.||.|.+|+.+++ +++..+.-.+.+|. ... .+++|-+.-.|+-+.++|+.
T Consensus 464 -g~ylAsGs~dg~V~iws~~~~-------------~l~~s~~~~~~Ife-l~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 464 -GRYLASGSLDGCVHIWSTKTG-------------KLVKSYQGTGGIFE-LCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred -CcEEEecCCCCeeEeccccch-------------heeEeecCCCeEEE-EEEcCCCCEEEEEecCCCceEEEec
Confidence 899999999999999999877 55655555554432 222 45677777778888888864
No 181
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.39 E-value=1.3e-10 Score=118.30 Aligned_cols=270 Identities=14% Similarity=0.113 Sum_probs=187.0
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
...++..|..|+.+|.+..|+.. |..+-.+..+.....+.-....|.+|..++.|+++..||..+|...-+|..+....
T Consensus 243 Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~ 321 (524)
T KOG0273|consen 243 WNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPA 321 (524)
T ss_pred ecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCc
Confidence 34456788899999999999975 76666665555444566677888999999999999999999999888887765431
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE 712 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~ 712 (900)
--..+. +...+.+.+.|+.++++-.....++-++..+....+..-..+.+..|..++.|+++..|+... +...-...
T Consensus 322 lDVdW~-~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~--~~~~~~l~ 398 (524)
T KOG0273|consen 322 LDVDWQ-SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ--SNSVHDLQ 398 (524)
T ss_pred cceEEe-cCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC--Ccchhhhh
Confidence 111222 234566777888888887665566666655544555555565567788889999999998554 22222222
Q ss_pred cCCcceeeeee---------eeCCCEEEEEeecCcEEEEC-CCCCEEeee-cCCCceeccccccccCCCeEEEEeeCCeE
Q 002615 713 LEVPAFASLCI---------TSANRHVICCLVDGHVVALD-SSGSIIWRC-RTGGPIFAGPCTSFALPSQVLICSRNGSI 781 (900)
Q Consensus 713 ~~~~~~~s~~~---------~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~-~~~~~~~~~~~~~~~~~~~l~~g~~dg~l 781 (900)
.+...+.+... ...+..+..++.++.|.+|| ..|..+..+ +...|+++..+.. .+..+..|+.||.|
T Consensus 399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~--~g~ylAsGs~dg~V 476 (524)
T KOG0273|consen 399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSP--NGRYLASGSLDGCV 476 (524)
T ss_pred hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecC--CCcEEEecCCCCee
Confidence 22111111111 11345677788899999999 899999887 4456666655322 24578889999999
Q ss_pred EEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 782 YSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 782 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
..|+.++|++...+.-...+....+..+ ++++.++..+|.+.++|.+
T Consensus 477 ~iws~~~~~l~~s~~~~~~Ifel~Wn~~------------G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 477 HIWSTKTGKLVKSYQGTGGIFELCWNAA------------GDKLGACASDGSVCVLDLR 523 (524)
T ss_pred EeccccchheeEeecCCCeEEEEEEcCC------------CCEEEEEecCCCceEEEec
Confidence 9999999999888766555443332222 8899999999999999874
No 182
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.38 E-value=5.3e-10 Score=114.84 Aligned_cols=293 Identities=14% Similarity=0.207 Sum_probs=183.3
Q ss_pred CCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEe---cCC-ceeeeeeEeCC
Q 002615 565 HSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQ---TCG-EVKCQPVVDAP 640 (900)
Q Consensus 565 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~---~~~-~~~~~~~~~~~ 640 (900)
.++.+..||-..++..-..+........+.+.+-+..+.+.+..|.+|+|+.+.|.+..+.. ..+ ....+..+. .
T Consensus 178 ~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~-e 256 (626)
T KOG2106|consen 178 NPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFL-E 256 (626)
T ss_pred CccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEc-C
Confidence 34567777766665555555444555567787877788999999999999999887765422 222 223333444 4
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeecc-CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCccee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPC-GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFA 719 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~ 719 (900)
++.+++|..+|.++.|+..+-+....... .+.+++-..+. ++.|+.|..|..+..||-+ .+.+-..+.+... .
T Consensus 257 ngdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr--~GtllSGgKDRki~~Wd~~---y~k~r~~elPe~~-G 330 (626)
T KOG2106|consen 257 NGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLR--DGTLLSGGKDRKIILWDDN---YRKLRETELPEQF-G 330 (626)
T ss_pred CCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEec--CccEeecCccceEEecccc---ccccccccCchhc-C
Confidence 67799999999999999876665544434 45566554444 4888889999999999833 4444444333221 1
Q ss_pred ee-eeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEec
Q 002615 720 SL-CITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSV 797 (900)
Q Consensus 720 s~-~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~ 797 (900)
.+ .+....+-+++|+..+.|.-=+ +++..+-..-.+........ ...++.+..++.|+.+..|+ ..++.|+...
T Consensus 331 ~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~--hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~ 406 (626)
T KOG2106|consen 331 PIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLAT--HPSKNQLLTCGQDKHVRLWN--DHKLEWTKII 406 (626)
T ss_pred CeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEc--CCChhheeeccCcceEEEcc--CCceeEEEEe
Confidence 11 2223334488887766554433 33322211111111111110 11245677788999999999 6789999888
Q ss_pred CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eC
Q 002615 798 GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IG 875 (900)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~ 875 (900)
..+..+..+... + .+++|+..|...++|.++. .++....- ++.++...+ ++
T Consensus 407 ~d~~~~~~fhps------------g-~va~Gt~~G~w~V~d~e~~-------------~lv~~~~d-~~~ls~v~ysp~G 459 (626)
T KOG2106|consen 407 EDPAECADFHPS------------G-VVAVGTATGRWFVLDTETQ-------------DLVTIHTD-NEQLSVVRYSPDG 459 (626)
T ss_pred cCceeEeeccCc------------c-eEEEeeccceEEEEecccc-------------eeEEEEec-CCceEEEEEcCCC
Confidence 877766544332 5 9999999999999998864 22222222 322222111 57
Q ss_pred CEEEEeeeCCeEEEEEcccc
Q 002615 876 GRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 876 ~~l~vg~~dg~l~~ld~~tg 895 (900)
..+-+|+.|+.||.|-...+
T Consensus 460 ~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 460 AFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred CEEEEecCCCeEEEEEECCC
Confidence 89999999999998866543
No 183
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.38 E-value=3.3e-11 Score=130.85 Aligned_cols=178 Identities=16% Similarity=0.207 Sum_probs=124.0
Q ss_pred hhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccCCCCCCCcCEEEEeccCCChhhHHHHHhhCCCceEEeecCccc
Q 002615 47 KKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHNMHVPSSLKLLVLSGEVLPLSMWDIISKLFPNISILNLYGSTE 126 (900)
Q Consensus 47 ~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE 126 (900)
..+.+..++.|++++++++.++|+.+..|++...+... . .+++.++++||++++...+.+.+.| ++++++.||+||
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l--~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE 248 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL--T-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE 248 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC--C-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch
Confidence 46788899999999999999999999999987665432 1 4799999999999999999999999 799999999999
Q ss_pred cccccceecccCCccccccCCCCcceeeeccCCcEEE--EecCCCCCCCccEEEEccccccccccCCCCCCccchhccCC
Q 002615 127 VSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIV--LVESDTVKPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHN 204 (900)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~--i~d~~~~~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~ 204 (900)
+.++ +.|... ...+ -...+-++ ++|+++ .++.+|.+ +.+. ..+++
T Consensus 249 -g~la--~eC~~g----------~lHl--~ed~~~vE~~ivD~~~----~~~~ViT~------L~n~----~~PlI---- 295 (430)
T TIGR02304 249 -GFLA--STCRCG----------TLHL--NEDLVHIEKQYLDEHK----RFVPIITD------FTRT----TQPIV---- 295 (430)
T ss_pred -hheE--EecCCC----------CEEE--ccccEEEEeeEECCCC----ceEEEEec------CCCc----cceEE----
Confidence 5433 233221 0001 11123344 676543 13333332 3221 22222
Q ss_pred cccccCcCCCCCcceEecCceEEEccC----Cc----E-EEEcccCCcEEE---Ccee--eChHHHHHHHh-CCCCeeEE
Q 002615 205 NSICNCSVSCGSQTYFRTGDFARRIQS----GD----L-VFLGRKDRTIKI---NGQR--MALEEIEHTLR-GHPDVVDT 269 (900)
Q Consensus 205 ~~~~~~~~~~~~~~~~~TGDl~~~~~~----G~----l-~~~GR~dd~ik~---~G~r--v~~~~iE~~l~-~~~~v~~~ 269 (900)
-|+|||+++..++ |. + .+.||.||++++ +|.. |.|..++.++. ..+.|.+.
T Consensus 296 --------------RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~y 361 (430)
T TIGR02304 296 --------------RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEY 361 (430)
T ss_pred --------------eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceE
Confidence 2999999987543 43 3 388999999996 4544 58999988744 57889888
Q ss_pred EEEEee
Q 002615 270 AVVSHK 275 (900)
Q Consensus 270 ~v~~~~ 275 (900)
.++...
T Consensus 362 Qi~Q~~ 367 (430)
T TIGR02304 362 RVLQTG 367 (430)
T ss_pred EEEEcc
Confidence 777543
No 184
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.37 E-value=1.2e-10 Score=112.17 Aligned_cols=243 Identities=14% Similarity=0.131 Sum_probs=163.5
Q ss_pred ccccccceEEeeCCceEEEEecCCCeEEEEECCC-CcEEEE--EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCC
Q 002615 543 SCVDASPLVVLKDSDIYLFVGSHSHKFICADAKR-SSVLWE--IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTG 619 (900)
Q Consensus 543 ~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~t-G~~~w~--~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG 619 (900)
.++..||. .+..+..||.|+.|++|+... |...-+ ....+.+ ...+.++++..+|+|+-|+.+..||+.+|
T Consensus 31 S~l~FSP~-----~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~Pv-L~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 31 SALAFSPQ-----ADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPV-LDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred heeEeccc-----cCceEEecccCCceEEEEEecCCcccchhhhccCCCe-EEEEEccCCceEEeeccCCceEEEEccCC
Confidence 44556662 466777999999999999876 555432 2233333 46788999999999999999999999999
Q ss_pred cEEEEEecCCceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEE
Q 002615 620 DIYWTFQTCGEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAI 698 (900)
Q Consensus 620 ~~~w~~~~~~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~ 698 (900)
+..-.-...+.+++.-.+... ...|.+||+|.+|..||.+.-+++-...+.+.+++.-+.. ..+.+++.+..|..|
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~---pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLY---PMAVVATAERHIAVY 181 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccC---ceeEEEecCCcEEEE
Confidence 776443344556555444321 2357899999999999999999999999988877765553 678899999999999
Q ss_pred EcCCCCceeeeEeecCCcc--eeeeeeeeCCCEEEEEeecCcEEEEC-CCC--CEEeeec--C-----CCceeccccccc
Q 002615 699 SVKALPFHTLWLHELEVPA--FASLCITSANRHVICCLVDGHVVALD-SSG--SIIWRCR--T-----GGPIFAGPCTSF 766 (900)
Q Consensus 699 ~~~~~~g~~~w~~~~~~~~--~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G--~~~w~~~--~-----~~~~~~~~~~~~ 766 (900)
++++ +....+.-..... ..+.++..+.+...+|+.+|++.... ..+ +.-+.++ . .+.+++...+.+
T Consensus 182 nL~n--~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~F 259 (347)
T KOG0647|consen 182 NLEN--PPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAF 259 (347)
T ss_pred EcCC--CcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEe
Confidence 9976 3222111111111 13455556666778899999887766 333 2222222 1 122444433322
Q ss_pred -cCCCeEEEEeeCCeEEEEeCCCCceeeEEe
Q 002615 767 -ALPSQVLICSRNGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 767 -~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~ 796 (900)
-..|.+...+.||....||.+....+.+++
T Consensus 260 hP~hgtlvTaGsDGtf~FWDkdar~kLk~s~ 290 (347)
T KOG0647|consen 260 HPVHGTLVTAGSDGTFSFWDKDARTKLKTSE 290 (347)
T ss_pred ecccceEEEecCCceEEEecchhhhhhhccC
Confidence 135778888899999999977655444433
No 185
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.37 E-value=3e-12 Score=124.76 Aligned_cols=274 Identities=12% Similarity=0.062 Sum_probs=173.9
Q ss_pred cCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccC
Q 002615 597 ADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGS 676 (900)
Q Consensus 597 ~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~ 676 (900)
-|++.++.|..|.+|..||..+-..+.....+.... .++.-+...|+.||.|.++..||.++|+++-.+-.+-...-.
T Consensus 205 YDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSV--LCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLh 282 (499)
T KOG0281|consen 205 YDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSV--LCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLH 282 (499)
T ss_pred ecchhhhcccccCceEEeccccHHHHHhhhcCCCcE--EeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEE
Confidence 344578899999999999977766655443333322 233334578899999999999999999987654322211122
Q ss_pred ceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC
Q 002615 677 PAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 677 ~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~ 755 (900)
..+. ++.++..+.+..+..||....+...+-+. ..+...+...+..++.+++.++.|.++..|+ .+++.+-.....
T Consensus 283 lrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrV-LvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gH 359 (499)
T KOG0281|consen 283 LRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRV-LVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 359 (499)
T ss_pred EEEe--CCEEEEecCCceeEEEeccCchHHHHHHH-HhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcc
Confidence 2333 48888899999999999775321111111 1111112223444667888899999999999 888876554322
Q ss_pred CceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEE
Q 002615 756 GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIH 835 (900)
Q Consensus 756 ~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~ 835 (900)
.. ...| ....+..++.|+.|.++..||.+.|+.+...+-+...+...-++ +..|..|..||+|.
T Consensus 360 kR--GIAC-lQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd-------------~krIVSGaYDGkik 423 (499)
T KOG0281|consen 360 KR--GIAC-LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-------------NKRIVSGAYDGKIK 423 (499)
T ss_pred cc--ccee-hhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec-------------CceeeeccccceEE
Confidence 21 1111 13445678888999999999999999887665555544443332 78899999999999
Q ss_pred EEEeecCcccccccccccceeeeeeeccCCccccCceeeCCEEEEeeeCCeEEEEEcccc
Q 002615 836 ILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIGGRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 836 ~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~~tg 895 (900)
+||...+........ ..-+....+-.|.+ ....+++-.++..+.|..+.+||..++
T Consensus 424 vWdl~aaldpra~~~---~~Cl~~lv~hsgRV-FrLQFD~fqIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 424 VWDLQAALDPRAPAS---TLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIWDFLNG 479 (499)
T ss_pred EEecccccCCccccc---chHHHhhhhcccee-EEEeecceEEEeccCCCeEEEEEcCCC
Confidence 999987632211000 00000011112222 233446677888889999999998765
No 186
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.36 E-value=6e-10 Score=121.39 Aligned_cols=315 Identities=16% Similarity=0.174 Sum_probs=195.7
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC-Cceeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC-GEVKCQP 635 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~-~~~~~~~ 635 (900)
=+.|.+|+.+|.+..||..+|+.+..+.....-.+++.-++.-+.|.+|+.+|.|..+|.+.++++-+|+.. +.+....
T Consensus 172 LNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslS 251 (910)
T KOG1539|consen 172 LNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLS 251 (910)
T ss_pred eeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEE
Confidence 467899999999999999999999887654322223333444457999999999999999999999999986 5554443
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-C-CccccC------ceee----ccCCEEEE---------------
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-G-GSIFGS------PAID----EVHDVLYV--------------- 688 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~-~~~~~~------~~~~----~~~~~l~v--------------- 688 (900)
.-.+..-.+.+|+..|.+..||++..+.+|.... + +.+... |++. ++.-.+|+
T Consensus 252 FrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~ 331 (910)
T KOG1539|consen 252 FRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRG 331 (910)
T ss_pred eccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeecc
Confidence 3344344566677779999999999888887653 1 111111 1110 00001111
Q ss_pred ---------------------EeCCCcEEEEEc---------------CC------------------------------
Q 002615 689 ---------------------ASTSGRLTAISV---------------KA------------------------------ 702 (900)
Q Consensus 689 ---------------------~t~~g~l~~~~~---------------~~------------------------------ 702 (900)
+..++.+..++. +.
T Consensus 332 GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W 411 (910)
T KOG1539|consen 332 GHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEW 411 (910)
T ss_pred CCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhh
Confidence 111111111110 00
Q ss_pred ---------CCceeeeEeecCC--------c-------ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec----
Q 002615 703 ---------LPFHTLWLHELEV--------P-------AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCR---- 753 (900)
Q Consensus 703 ---------~~g~~~w~~~~~~--------~-------~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~---- 753 (900)
..-...|.+.... . ...+.++..-++..++|+..|.|-.|+ ++|-..-.+.
T Consensus 412 ~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~a 491 (910)
T KOG1539|consen 412 DNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPA 491 (910)
T ss_pred cceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCcc
Confidence 0000122221110 0 012233444467788898899999999 8887765552
Q ss_pred CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCc
Q 002615 754 TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGS 833 (900)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~ 833 (900)
..+++.... ....+..++.++.+|.+..||.+++.++-+.+++..+....+... .+.++++.++=.
T Consensus 492 h~~~V~gla--~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~------------s~l~a~~~ddf~ 557 (910)
T KOG1539|consen 492 HKGEVTGLA--VDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRV------------SDLLAIALDDFS 557 (910)
T ss_pred ccCceeEEE--ecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeeh------------hhhhhhhcCcee
Confidence 223333222 112244578889999999999988888877777776654433322 556777777888
Q ss_pred EEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEEccccccc
Q 002615 834 IHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIALETQHLE 898 (900)
Q Consensus 834 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~tg~~~ 898 (900)
|.++|..+. ++...+.-+++-+....+ ++..|.+.+.|++|..||+-|+.+.
T Consensus 558 I~vvD~~t~-------------kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 558 IRVVDVVTR-------------KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred EEEEEchhh-------------hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence 999999865 233333333433333333 5678999999999999999998763
No 187
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.35 E-value=6.4e-09 Score=107.06 Aligned_cols=267 Identities=15% Similarity=0.172 Sum_probs=175.2
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecC----CceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLE----GRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC 628 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~ 628 (900)
++..+..+.+....+.++.|++.+|.+.-+..+- .....+.++..++ .++.|..+|.|+.|+..+.++..+...+
T Consensus 208 FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~eng-dviTgDS~G~i~Iw~~~~~~~~k~~~aH 286 (626)
T KOG2106|consen 208 FHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENG-DVITGDSGGNILIWSKGTNRISKQVHAH 286 (626)
T ss_pred eccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCC-CEEeecCCceEEEEeCCCceEEeEeeec
Confidence 4445666777666677999999988766543321 2344567777774 6889999999999998777776554444
Q ss_pred C-ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCcee
Q 002615 629 G-EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHT 707 (900)
Q Consensus 629 ~-~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~ 707 (900)
. .+.+..+. .++.|+.|..|..|..|| .+-+.+...+++...-..-.+....+.+|+||..+.+..=++++ +-.
T Consensus 287 ~ggv~~L~~l--r~GtllSGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~--~f~ 361 (626)
T KOG2106|consen 287 DGGVFSLCML--RDGTLLSGGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLEN--GFT 361 (626)
T ss_pred CCceEEEEEe--cCccEeecCccceEEecc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecC--Cce
Confidence 3 44443333 347888899999999999 44445555555432222222333345599999887776655554 222
Q ss_pred eeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCC
Q 002615 708 LWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQE 787 (900)
Q Consensus 708 ~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~ 787 (900)
+-... +....-..+..++.+.+..++.++.+..|+ +.+++|......+..+.. +...+.+.+|+..|...++|.+
T Consensus 362 ~~v~g-h~delwgla~hps~~q~~T~gqdk~v~lW~-~~k~~wt~~~~d~~~~~~---fhpsg~va~Gt~~G~w~V~d~e 436 (626)
T KOG2106|consen 362 LTVQG-HGDELWGLATHPSKNQLLTCGQDKHVRLWN-DHKLEWTKIIEDPAECAD---FHPSGVVAVGTATGRWFVLDTE 436 (626)
T ss_pred EEEEe-cccceeeEEcCCChhheeeccCcceEEEcc-CCceeEEEEecCceeEee---ccCcceEEEeeccceEEEEecc
Confidence 21111 111112334445667788888999999998 457889988777765554 3445589999999999999999
Q ss_pred CCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 788 SGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 788 tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
+..++-...-..++....+ .+++..+++|+.|+.||+|..+.+
T Consensus 437 ~~~lv~~~~d~~~ls~v~y------------sp~G~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 437 TQDLVTIHTDNEQLSVVRY------------SPDGAFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred cceeEEEEecCCceEEEEE------------cCCCCEEEEecCCCeEEEEEECCC
Confidence 8555433222333333222 234899999999999999988754
No 188
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.33 E-value=4.5e-10 Score=125.37 Aligned_cols=241 Identities=13% Similarity=0.120 Sum_probs=178.8
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCc--EEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEEC-CCCeEEEeec
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGD--IYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDF-RNYRCVYKLP 668 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~--~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~-~~g~~~w~~~ 668 (900)
+..++.++..+..++.++.+..|+..+++ ..-....+........+.+++..+..++.|++++.||. ..+..+..+.
T Consensus 164 ~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~ 243 (456)
T KOG0266|consen 164 CVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLK 243 (456)
T ss_pred EEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEec
Confidence 46778899898889999999999987776 44333334455566667777778999999999999999 6668888888
Q ss_pred cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCC
Q 002615 669 CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGS 747 (900)
Q Consensus 669 ~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~ 747 (900)
.+.....+.++.+.++.++.|+.|+.++.||.++ |+.+-....+........+..++..++++++|+.+..|| .+|.
T Consensus 244 gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~--~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 244 GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT--GECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGS 321 (456)
T ss_pred CCCCceEEEEecCCCCEEEEecCCCcEEEEeccC--CeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence 7777777778888778899999999999999998 898888888887777788888899999999999999999 8887
Q ss_pred EE--eeecCCCceeccccccc-cCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeE
Q 002615 748 II--WRCRTGGPIFAGPCTSF-ALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRL 824 (900)
Q Consensus 748 ~~--w~~~~~~~~~~~~~~~~-~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (900)
.. -............++.. -....+++++.|+.+..||..+++..-.+.....-....+. ......+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 393 (456)
T KOG0266|consen 322 KLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFS--------PTLSTGGKL 393 (456)
T ss_pred eeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEec--------ccccCCCCe
Confidence 32 22221111101111112 23567888999999999999999877655443332111110 001233889
Q ss_pred EEEEcCCCcEEEEEeecC
Q 002615 825 VCICTSSGSIHILRVNLD 842 (900)
Q Consensus 825 l~~g~~~G~v~~~d~~~~ 842 (900)
+++|+.|+.|++|+..++
T Consensus 394 i~sg~~d~~v~~~~~~s~ 411 (456)
T KOG0266|consen 394 IYSGSEDGSVYVWDSSSG 411 (456)
T ss_pred EEEEeCCceEEEEeCCcc
Confidence 999999999999999865
No 189
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.33 E-value=9e-11 Score=115.80 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=160.7
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC-eEEEeeccC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY-RCVYKLPCG 670 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g-~~~w~~~~~ 670 (900)
...+.++...+++.+.|++|++||..||++.-....+........++..+..+...+.|-.+..||..+- +++.....+
T Consensus 113 ~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh 192 (406)
T KOG0295|consen 113 RVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGH 192 (406)
T ss_pred eeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCc
Confidence 3445555555677778999999999999986544444433445556666666777777766777776541 222222224
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
....+++++.+.++.|..++.+..+..|+..+ |-.+.++..+...+....+..++-.+..++.+.++..|- .+++..
T Consensus 193 ~h~vS~V~f~P~gd~ilS~srD~tik~We~~t--g~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k 270 (406)
T KOG0295|consen 193 EHGVSSVFFLPLGDHILSCSRDNTIKAWECDT--GYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK 270 (406)
T ss_pred ccceeeEEEEecCCeeeecccccceeEEeccc--ceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh
Confidence 45678888888889999999999999999998 888877776666555555554544455566778888877 555211
Q ss_pred -----eeecCC----CceeccccccccC-----CCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccccccccc
Q 002615 750 -----WRCRTG----GPIFAGPCTSFAL-----PSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKL 815 (900)
Q Consensus 750 -----w~~~~~----~~~~~~~~~~~~~-----~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 815 (900)
.+.... .+..+.|.+.... ...+..++.|+.+..||..+|..+.++..+.+.+....+..
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p------ 344 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP------ 344 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC------
Confidence 111100 0111122222111 23688889999999999999999998877766655544433
Q ss_pred ccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 816 ESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 816 ~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
.|.+|+.+.+|+.|++||.+++
T Consensus 345 -----~Gkyi~ScaDDktlrvwdl~~~ 366 (406)
T KOG0295|consen 345 -----GGKYILSCADDKTLRVWDLKNL 366 (406)
T ss_pred -----CCeEEEEEecCCcEEEEEeccc
Confidence 2889999999999999999976
No 190
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.32 E-value=5.2e-10 Score=107.81 Aligned_cols=266 Identities=11% Similarity=0.125 Sum_probs=179.7
Q ss_pred CCceEEEEecCCCeEEEEECC-CCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 555 DSDIYLFVGSHSHKFICADAK-RSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
.++..+..|++|..|+.|+.. .-+-.|..+++....-......+++.|+..+.|.+++.||.++|+...+++.+...+.
T Consensus 57 P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vN 136 (338)
T KOG0265|consen 57 PDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVN 136 (338)
T ss_pred CCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceee
Confidence 356677888899999999954 3344677777665444556778888999999999999999999999988888776554
Q ss_pred eeeEeC-CCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee
Q 002615 634 QPVVDA-PRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE 712 (900)
Q Consensus 634 ~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~ 712 (900)
+..... .-..|-.|+.|+++..||..+.+.+..+...-. ..+..+.+..+.++.|.-++.+..||+.. ...+....
T Consensus 137 s~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyq-ltAv~f~d~s~qv~sggIdn~ikvWd~r~--~d~~~~ls 213 (338)
T KOG0265|consen 137 SLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQ-LTAVGFKDTSDQVISGGIDNDIKVWDLRK--NDGLYTLS 213 (338)
T ss_pred ecCccccCCeEEEecCCCceEEEEeecccchhhcccccee-EEEEEecccccceeeccccCceeeecccc--CcceEEee
Confidence 332221 223466689999999999998777665533222 22334455567899999999999999977 56677676
Q ss_pred cCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C---CCCE-EeeecC-----CCceeccccccccCCCeEEEEeeCCeEE
Q 002615 713 LEVPAFASLCITSANRHVICCLVDGHVVALD-S---SGSI-IWRCRT-----GGPIFAGPCTSFALPSQVLICSRNGSIY 782 (900)
Q Consensus 713 ~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~---~G~~-~w~~~~-----~~~~~~~~~~~~~~~~~l~~g~~dg~l~ 782 (900)
.+...+.......++..+..-+.|..+..+| . .++. +-.+.. +...+. |...-....+-+|+.|..+|
T Consensus 214 Gh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~--cswsp~~~~i~ags~dr~vy 291 (338)
T KOG0265|consen 214 GHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK--CSWSPNGTKITAGSADRFVY 291 (338)
T ss_pred cccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce--eeccCCCCccccccccceEE
Confidence 6766666777777888888888888898888 2 3332 211111 111111 11122345677889999999
Q ss_pred EEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEE
Q 002615 783 SFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHI 836 (900)
Q Consensus 783 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~ 836 (900)
.||..+-.++.+.+-+...+....+ .+....+..++.|.+||.
T Consensus 292 vwd~~~r~~lyklpGh~gsvn~~~F-----------hp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 292 VWDTTSRRILYKLPGHYGSVNEVDF-----------HPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EeecccccEEEEcCCcceeEEEeee-----------cCCCcEEEEeccCceeEe
Confidence 9998776777665533322221111 122677788888887764
No 191
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.32 E-value=2.9e-10 Score=122.17 Aligned_cols=337 Identities=10% Similarity=0.067 Sum_probs=210.7
Q ss_pred ccccccccccc------cccceEE--eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCC--EEEE
Q 002615 535 ELWKVHMESCV------DASPLVV--LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFS--QVVV 604 (900)
Q Consensus 535 ~~W~~~~~~~v------~~sp~v~--~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~--~i~v 604 (900)
.+|..++++++ .-.|++. +...++.+..|+.+|.+..||...+.....++.++.+.++..+.++-. .+++
T Consensus 87 rv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~s 166 (775)
T KOG0319|consen 87 RVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLAS 166 (775)
T ss_pred EEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheee
Confidence 44666666654 2356655 334557788899999999999999999999998888777778776543 3788
Q ss_pred EeeCCEEEEEECCCCcE-EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec--
Q 002615 605 GCYKGKIYFLDYLTGDI-YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE-- 681 (900)
Q Consensus 605 g~~dg~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~-- 681 (900)
|..|+.+++||..++.. +.....+.....+..+..++..++.++.|..++.||..+-+..........+-+......
T Consensus 167 g~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~ 246 (775)
T KOG0319|consen 167 GATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREEL 246 (775)
T ss_pred cCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhc
Confidence 99999999999887765 222222333344445555677788888999999999866555444433322222222211
Q ss_pred --cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC-CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc
Q 002615 682 --VHDVLYVASTSGRLTAISVKALPFHTLWLHELE-VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP 757 (900)
Q Consensus 682 --~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~-~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~ 757 (900)
.+..++.++.+|.+..|+.++ ++.+.+..-. .+.+.........+.+++.+.+..+..+| .++++.-++-....
T Consensus 247 ~~~~~~~~TaG~~g~~~~~d~es--~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~nd 324 (775)
T KOG0319|consen 247 GGKGEYIITAGGSGVVQYWDSES--GKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYND 324 (775)
T ss_pred CCcceEEEEecCCceEEEEeccc--chhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCch
Confidence 134677888899999999887 7665544332 22233444455567778888899999999 77777644432222
Q ss_pred eeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 758 IFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 758 ~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
.....+.....++.+.+++..+.+..|+..+-... .+.-+.....+..+. .++.++..|+.|..+++|
T Consensus 325 EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~-----------~~g~llat~sKD~svilW 392 (775)
T KOG0319|consen 325 EILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVW-----------SSGDLLATGSKDKSVILW 392 (775)
T ss_pred hheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeec-----------ccCcEEEEecCCceEEEE
Confidence 22222222334578999999999999987654433 333333333322211 125699999999999999
Q ss_pred EeecCcccccccccccceeeeeeeccCCccccCcee---eCCEEEEeeeCCeEEEEEccc
Q 002615 838 RVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM---IGGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 838 d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~---~~~~l~vg~~dg~l~~ld~~t 894 (900)
..+++..... ......-+...+..... .-..+..++.|..+..|++..
T Consensus 393 r~~~~~~~~~---------~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~ 443 (775)
T KOG0319|consen 393 RLNNNCSKSL---------CVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPK 443 (775)
T ss_pred EecCCcchhh---------hhhhhcccccccceeeecccCccEEEEecCCceEEEecCCC
Confidence 8854422111 01111111111111111 124567788899999998764
No 192
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.32 E-value=8.5e-10 Score=117.64 Aligned_cols=279 Identities=14% Similarity=0.105 Sum_probs=196.8
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEE-EecC-CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeec
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWT-FQTC-GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLP 668 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~-~~~~-~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~ 668 (900)
.+.+++...+.+.++-.+|.|-.|++.++=..-. +..+ +......++. +++.++..+.+|.|..||+.+++.+...+
T Consensus 29 ~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d 107 (691)
T KOG2048|consen 29 VSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNID 107 (691)
T ss_pred EEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEec
Confidence 3667777777899999999999999988643322 2222 1223334455 46889999999999999999999999999
Q ss_pred cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCc--ceeeeeeeeCCCEEEEEeecCcEEEEC-CC
Q 002615 669 CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVP--AFASLCITSANRHVICCLVDGHVVALD-SS 745 (900)
Q Consensus 669 ~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~--~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~ 745 (900)
..+..+.+.++.+.+..+.+|+.+|.++-++..+ +++.....+... -..+.....++..++.|+.||.|.++| ..
T Consensus 108 ~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p--~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 108 SNGGAIWSIAINPENTILAIGCDDGVLYDFSIGP--DKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKS 185 (691)
T ss_pred CCCcceeEEEeCCccceEEeecCCceEEEEecCC--ceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCC
Confidence 8777777777777788999999999888888776 777766555433 223445555566689999999999999 88
Q ss_pred CCEEeeecC--CCceecccc----ccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccccccccccccc
Q 002615 746 GSIIWRCRT--GGPIFAGPC----TSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCL 819 (900)
Q Consensus 746 G~~~w~~~~--~~~~~~~~~----~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (900)
|..+...+. ..---..++ +....++.|..|..-|.|..||.+.|.+.-.+.....-+....+.+
T Consensus 186 ~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~---------- 255 (691)
T KOG2048|consen 186 GQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVAD---------- 255 (691)
T ss_pred CceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcC----------
Confidence 877652221 110000111 1244688999999999999999999998766655443333333322
Q ss_pred CCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeCCEEEEeeeCCeEEEEEc
Q 002615 820 SIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIGGRVFVGCRDDYIYCIAL 892 (900)
Q Consensus 820 ~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~ 892 (900)
.++.+++++-|+.+..|...++...|. ......+++.-+.+.++.+..++.|.+|..|+.-..
T Consensus 256 -~~d~vfsaGvd~~ii~~~~~~~~~~wv---------~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s 318 (691)
T KOG2048|consen 256 -NEDRVFSAGVDPKIIQYSLTTNKSEWV---------INSRRDLHAHDVRSMAVIENALISGGRDFTLAICSS 318 (691)
T ss_pred -CCCeEEEccCCCceEEEEecCCcccee---------eeccccCCcccceeeeeecceEEecceeeEEEEccc
Confidence 278999999999999998876643211 112234566666777888889999999998886543
No 193
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=7.1e-09 Score=101.22 Aligned_cols=236 Identities=12% Similarity=0.059 Sum_probs=157.3
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecC--CCeEEEEECCCCeEEEeec
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSH--DHNLYALDFRNYRCVYKLP 668 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~--dg~l~~~d~~~g~~~w~~~ 668 (900)
.+.-++++|..+.+.+.|..|..||..+|++..+............+......+..++. |..|..+++.+.+.+..+.
T Consensus 18 ~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~ 97 (311)
T KOG1446|consen 18 NSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFP 97 (311)
T ss_pred eEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcC
Confidence 36778889888998888889999999999998877655333333344444455666655 7889999999999999999
Q ss_pred cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C-C-
Q 002615 669 CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S-S- 745 (900)
Q Consensus 669 ~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-~- 745 (900)
.+.....+..+.+.++..+.++.|+.++.||++. -+..-......+. ..+..+.+-.+.++.....|..|| + -
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~--~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~IkLyD~Rs~d 173 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRV--KKCQGLLNLSGRP--IAAFDPEGLIFALANGSELIKLYDLRSFD 173 (311)
T ss_pred CCCceEEEEEecCCCCeEEecccCCeEEeeEecC--CCCceEEecCCCc--ceeECCCCcEEEEecCCCeEEEEEecccC
Confidence 8888888888888788899999999999999885 3333333332222 223333333333344444788888 3 2
Q ss_pred CCE--EeeecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCcee---ccccccccccccccccc
Q 002615 746 GSI--IWRCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPIT---ASAYIDEHLQLKLESCL 819 (900)
Q Consensus 746 G~~--~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~---~~~~~~~~~~~~~~~~~ 819 (900)
..+ ...+..+...-.. .+.+. .+..|.+++..+.++.+|.-+|.++-++....... ..+++ .
T Consensus 174 kgPF~tf~i~~~~~~ew~-~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f-----------t 241 (311)
T KOG1446|consen 174 KGPFTTFSITDNDEAEWT-DLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF-----------T 241 (311)
T ss_pred CCCceeEccCCCCcccee-eeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE-----------C
Confidence 111 1222211110000 01111 24568889999999999999999887765443222 22222 2
Q ss_pred CCCeEEEEEcCCCcEEEEEeecC
Q 002615 820 SIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 820 ~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
+++.++..|+.||.|++|+.++|
T Consensus 242 Pds~Fvl~gs~dg~i~vw~~~tg 264 (311)
T KOG1446|consen 242 PDSKFVLSGSDDGTIHVWNLETG 264 (311)
T ss_pred CCCcEEEEecCCCcEEEEEcCCC
Confidence 34889999999999999999877
No 194
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.30 E-value=1.1e-11 Score=99.24 Aligned_cols=70 Identities=47% Similarity=0.625 Sum_probs=61.4
Q ss_pred HHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccC--CEEEEcCC-cCCCCC
Q 002615 255 EIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIP--NRFVFMDS-LPMTSS 331 (900)
Q Consensus 255 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P--~~~~~v~~-lP~t~~ 331 (900)
|||++|.+||+|.+|+|++.++...++.++||+++ ..++|+++++++||.|++| ..++.+++ ||+|++
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~---------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~ 71 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL---------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPS 71 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE---------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETT
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe---------eecccccchhhhCCCcceeeEEEEccccCcCCCCCC
Confidence 79999999999999999999988888999999998 1278999999999999999 66666677 999999
Q ss_pred CC
Q 002615 332 GK 333 (900)
Q Consensus 332 GK 333 (900)
||
T Consensus 72 GK 73 (73)
T PF13193_consen 72 GK 73 (73)
T ss_dssp SS
T ss_pred CC
Confidence 98
No 195
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.29 E-value=2.5e-10 Score=116.16 Aligned_cols=276 Identities=17% Similarity=0.144 Sum_probs=184.5
Q ss_pred eeceeEecCCCEEEEEeeCCEEEEEECCCCcEE---EEEe---------------cCCceeeeeeEeCCCCEEEEecCCC
Q 002615 590 ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIY---WTFQ---------------TCGEVKCQPVVDAPRQLIWCGSHDH 651 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~---w~~~---------------~~~~~~~~~~~~~~~~~i~~gs~dg 651 (900)
.+++++++++.++|.++.+|.|..|+..+|+.. |..+ .+..-..+.++..++.++.+|..|.
T Consensus 145 ~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~ 224 (479)
T KOG0299|consen 145 VTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDR 224 (479)
T ss_pred ceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCc
Confidence 346778888889999999999999999999743 3321 1111223455667788899999999
Q ss_pred eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEE
Q 002615 652 NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVI 731 (900)
Q Consensus 652 ~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~ 731 (900)
.+..||..+++.+..+..+-...++.++....+.+|.++.++.+..|+++. ...+-+...+...........-...+-
T Consensus 225 ~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~--~s~vetlyGHqd~v~~IdaL~reR~vt 302 (479)
T KOG0299|consen 225 HVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ--LSYVETLYGHQDGVLGIDALSRERCVT 302 (479)
T ss_pred eEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH--hHHHHHHhCCccceeeechhcccceEE
Confidence 999999999998888777666667777777678899999999999999875 333333333333333333333455566
Q ss_pred EEeecCcEEEEC-C-CCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccc-ccc
Q 002615 732 CCLVDGHVVALD-S-SGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASA-YID 808 (900)
Q Consensus 732 ~~~~~g~v~~~d-~-~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~-~~~ 808 (900)
+|..|.++..|+ . .-++++.-. . .+..|+...++..++.|+.+|.|+.|+..+.+++......+++...+ -+.
T Consensus 303 VGgrDrT~rlwKi~eesqlifrg~-~---~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~ 378 (479)
T KOG0299|consen 303 VGGRDRTVRLWKIPEESQLIFRGG-E---GSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVN 378 (479)
T ss_pred eccccceeEEEeccccceeeeeCC-C---CCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccc
Confidence 676788888887 3 334444322 1 23345556677889999999999999999999999887766544332 000
Q ss_pred cccccccc--cccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee-eCCEEEEee
Q 002615 809 EHLQLKLE--SCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM-IGGRVFVGC 882 (900)
Q Consensus 809 ~~~~~~~~--~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~-~~~~l~vg~ 882 (900)
.+ .... ......++++.|+.+|.|.+|....|.. . .+.+..+.+.|-+.+-... .+..|++|+
T Consensus 379 ~~--~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r-~--------i~~l~~ls~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 379 GN--FWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLR-A--------INLLYSLSLVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred cc--cceeeeEecccCceEEecCCCCceEEEEecCCcc-c--------cceeeecccccEEEEEEEccCCCEEEEec
Confidence 00 0111 1234578999999999999999987621 1 1445555555544332222 345688885
No 196
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.29 E-value=3.3e-10 Score=127.35 Aligned_cols=322 Identities=20% Similarity=0.217 Sum_probs=198.5
Q ss_pred CCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhhccC-
Q 002615 7 LHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQSQHN- 84 (900)
Q Consensus 7 ~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~~~~- 84 (900)
+.+..-++.+.+.+-..|+ ...|+..++|.+.++.+|.++..+|..|+..|++++|.-++.+=+.+..+.........
T Consensus 981 l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~en 1060 (1363)
T KOG3628|consen 981 LYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVEN 1060 (1363)
T ss_pred cccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccch
Confidence 3444444555555544444 55888999999988888999999999999999999999988888888877654332211
Q ss_pred ----CCCCCCcCEEEEeccCCChhhHHHHHhhCCC-----ceEEeecCccccccccceecccCCcccc-------ccCCC
Q 002615 85 ----MHVPSSLKLLVLSGEVLPLSMWDIISKLFPN-----ISILNLYGSTEVSGDCTYFDCKRLPSIL-------EMSTL 148 (900)
Q Consensus 85 ----~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~-----~~l~~~YG~TE~~~~~~~~~~~~~~~~~-------~~~~~ 148 (900)
..+.++ ..++..=|.....+.+.|.+.|.. ..+--.|+.-=--.+|........|... .....
T Consensus 1061 l~~~gnn~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV 1139 (1363)
T KOG3628|consen 1061 LSKRGNNTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRV 1139 (1363)
T ss_pred hhhhhccccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccce
Confidence 011222 445555556566777777766521 1222233322111111110000000000 00000
Q ss_pred Ccc-----------eeeeccCCcEEEEecCCCC----CCCccEEEEccccccccccCCCCCCccchhccCCcccccCcCC
Q 002615 149 KSV-----------PIGLPISNCDIVLVESDTV----KPDEGEIYAGGLCLSNGYFSESTFMPSEYVKLHNNSICNCSVS 213 (900)
Q Consensus 149 ~~~-----------~~G~p~~~~~~~i~d~~~~----~~~~GEl~v~g~~~~~gY~~~~~~~~~~f~~~~~~~~~~~~~~ 213 (900)
..+ .-|.-.+++++.|++++.. .++.||||+.+..-+.+|++..+ + +.....+.... ...
T Consensus 1140 ~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d---~-~~~~~fn~rl~-~g~ 1214 (1363)
T KOG3628|consen 1140 RLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGD---E-LRSNHFNARLS-SGD 1214 (1363)
T ss_pred eeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCc---h-hhhhhhhhhcc-ccc
Confidence 111 1266678899999988773 45679999999988888776411 1 22221111100 011
Q ss_pred CCCcceEecCceEEEcc------C----CcEEEEcccCCcEEECceeeChHHHHHHHhC-CCCeeEEEEEEeecCCceEE
Q 002615 214 CGSQTYFRTGDFARRIQ------S----GDLVFLGRKDRTIKINGQRMALEEIEHTLRG-HPDVVDTAVVSHKHQGELVI 282 (900)
Q Consensus 214 ~~~~~~~~TGDl~~~~~------~----G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~ 282 (900)
..+..|-||||||.... + ..||++|-.++.+.+||.|..|.+||..+.+ ||.|..|+|+.... .
T Consensus 1215 ~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g-----l 1289 (1363)
T KOG3628|consen 1215 LLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG-----L 1289 (1363)
T ss_pred cccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC-----e
Confidence 22567999999998632 2 3589999999999999999999999998876 99999999997654 4
Q ss_pred EEEEEEecCCCCchHHHHHHHHHHHHhhCCCCccCCEEEEcCC--cCCCCCCCcchhhhccc
Q 002615 283 LVAFIVLKEKKTSSEIFLSSIKSWVSSKLPLAMIPNRFVFMDS--LPMTSSGKVDYASLSAS 342 (900)
Q Consensus 283 l~~~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~~~~v~~--lP~t~~GKidr~~L~~~ 342 (900)
+|..++...+. ....+..-|...+-+. ++.+-+.+++|+. +|+++.|.-+|..+++.
T Consensus 1290 vVvviE~~gq~-~~~~LvPlIv~~vL~e--H~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~ 1348 (1363)
T KOG3628|consen 1290 VVVVIECHGQQ-ELADLVPLIVNVVLEE--HYIILDVVAFVDKGVFPRNSRGEKQRAHILDS 1348 (1363)
T ss_pred EEEEEEecCch-hHhhhhHHHHHHHHhh--cceEEEEEEEecCCccccCCchhhHHHHHHHH
Confidence 66666665522 2222222222222221 3566677777765 99999998888877654
No 197
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.28 E-value=5.4e-09 Score=111.37 Aligned_cols=271 Identities=11% Similarity=0.107 Sum_probs=161.7
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEE-ecCCCeEEEEECCCCeEEEeeccCCccccCcee
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWC-GSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAI 679 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~-gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~ 679 (900)
.+++++.|+.++.||..+++.+..+..+..+. ...+.+++..+|+ ++.++.++.||..+++.+..+..+... ....+
T Consensus 3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~-~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~ 80 (300)
T TIGR03866 3 AYVSNEKDNTISVIDTATLEVTRTFPVGQRPR-GITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDP-ELFAL 80 (300)
T ss_pred EEEEecCCCEEEEEECCCCceEEEEECCCCCC-ceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCc-cEEEE
Confidence 35566789999999999999888777554433 3456666666654 567889999999999887766544332 23445
Q ss_pred eccCCEEEEEe-CCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecC-cEEEEC-CCCCEEeeecCCC
Q 002615 680 DEVHDVLYVAS-TSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDG-HVVALD-SSGSIIWRCRTGG 756 (900)
Q Consensus 680 ~~~~~~l~v~t-~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g-~v~~~d-~~G~~~w~~~~~~ 756 (900)
.++++.+|+++ .++.+..||+.+ ++.+.....+... ....+.+++..++++..++ .+..+| .+++.......+.
T Consensus 81 ~~~g~~l~~~~~~~~~l~~~d~~~--~~~~~~~~~~~~~-~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 157 (300)
T TIGR03866 81 HPNGKILYIANEDDNLVTVIDIET--RKVLAEIPVGVEP-EGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ 157 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCC--CeEEeEeeCCCCc-ceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC
Confidence 55566787765 478899999887 6666555433221 3445566677777776554 356678 6666654433222
Q ss_pred ceecccccccc-CCCeEEEEe-eCCeEEEEeCCCCceeeEEecCCceec-ccccccccccccccccCCCeEEEEE-cCCC
Q 002615 757 PIFAGPCTSFA-LPSQVLICS-RNGSIYSFEQESGNLLWEYSVGDPITA-SAYIDEHLQLKLESCLSIDRLVCIC-TSSG 832 (900)
Q Consensus 757 ~~~~~~~~~~~-~~~~l~~g~-~dg~l~~~d~~tG~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~g-~~~G 832 (900)
.... +... .+..+++++ .+|.++.||.++++..-.+........ ...... ......++..++++ ..++
T Consensus 158 ~~~~---~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 158 RPRF---AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPV-----GIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred CccE---EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCcc-----ceEECCCCCEEEEEcCCCC
Confidence 2111 1122 234566665 489999999999887544432211000 000000 00012235666654 4466
Q ss_pred cEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEee-eCCeEEEEEccccccc
Q 002615 833 SIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGC-RDDYIYCIALETQHLE 898 (900)
Q Consensus 833 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~-~dg~l~~ld~~tg~~~ 898 (900)
.+.+||.+++ +....... +.......+ .+..||++. .+|.|.+||..+++..
T Consensus 230 ~i~v~d~~~~-------------~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~ 284 (300)
T TIGR03866 230 RVAVVDAKTY-------------EVLDYLLV-GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI 284 (300)
T ss_pred eEEEEECCCC-------------cEEEEEEe-CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 7999998754 22211111 112222223 456788865 5899999999998853
No 198
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.28 E-value=5.9e-10 Score=119.89 Aligned_cols=308 Identities=15% Similarity=0.159 Sum_probs=206.4
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEec--CCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKL--EGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
++..++.++++..+..|+..+|++....+. ...+ ....+.+.+..+..|+.||.+.+||...+.....+..++.+.+
T Consensus 73 d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pv-i~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVs 151 (775)
T KOG0319|consen 73 DEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPV-ITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVS 151 (775)
T ss_pred CccEEEEeeccceEEEEEcccchHhHhHhhccCCCe-EEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEE
Confidence 477899999999999999999987644333 3333 3456777777888999999999999999999999988788888
Q ss_pred eeeEeCC--CCEEEEecCCCeEEEEECCCCeE-EEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 634 QPVVDAP--RQLIWCGSHDHNLYALDFRNYRC-VYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 634 ~~~~~~~--~~~i~~gs~dg~l~~~d~~~g~~-~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
+..+.+. ...++.|..|+.+++||..++.. +.....+.+-..+..+..++..++.++.+..++.||... .+.+-.
T Consensus 152 sl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~--~~~l~~ 229 (775)
T KOG0319|consen 152 SLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQ--YKKLKT 229 (775)
T ss_pred EEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhh--hhhhhe
Confidence 8887764 33478899999999999986654 333333333344445555567788888899999999865 444333
Q ss_pred eecCCcceeeeeeeeC-----CCEEEEEeecCcEEEEC-CCCCEEeeecCC-CceeccccccccCCCeEEEEeeCCeEEE
Q 002615 711 HELEVPAFASLCITSA-----NRHVICCLVDGHVVALD-SSGSIIWRCRTG-GPIFAGPCTSFALPSQVLICSRNGSIYS 783 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~-----~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~l~~ 783 (900)
....... .+.....+ +.+++..+.+|.+..+| .+|+.+.+.... .+- ...+......+.+++.+.+..+..
T Consensus 230 lp~ye~~-E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e-~~~~~~~~~~~~~l~vtaeQnl~l 307 (775)
T KOG0319|consen 230 LPLYESL-ESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEE-IDHLLAIESMSQLLLVTAEQNLFL 307 (775)
T ss_pred echhhhe-eeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchh-hhcceeccccCceEEEEccceEEE
Confidence 3222221 22333333 45778888889999999 777776544322 211 111222334567888888999999
Q ss_pred EeCCCCceeeEEec-CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeec
Q 002615 784 FEQESGNLLWEYSV-GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLE 862 (900)
Q Consensus 784 ~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 862 (900)
||.+++++.-.+-- +..+...-+.. +.+..++++++.+.+++|+..+-. . + .+.
T Consensus 308 ~d~~~l~i~k~ivG~ndEI~Dm~~lG-----------~e~~~laVATNs~~lr~y~~~~~~-c----------~---ii~ 362 (775)
T KOG0319|consen 308 YDEDELTIVKQIVGYNDEILDMKFLG-----------PEESHLAVATNSPELRLYTLPTSY-C----------Q---IIP 362 (775)
T ss_pred EEccccEEehhhcCCchhheeeeecC-----------CccceEEEEeCCCceEEEecCCCc-e----------E---EEe
Confidence 99988887654322 22333333322 237899999999999999776321 1 1 223
Q ss_pred cCCccccCcee-eCC-EEEEeeeCCeEEEEEcc
Q 002615 863 LQGDIFSSPVM-IGG-RVFVGCRDDYIYCIALE 893 (900)
Q Consensus 863 l~~~~~ss~~~-~~~-~l~vg~~dg~l~~ld~~ 893 (900)
-+.+.+-+..+ ..| .|..|+.|..+..|.++
T Consensus 363 GH~e~vlSL~~~~~g~llat~sKD~svilWr~~ 395 (775)
T KOG0319|consen 363 GHTEAVLSLDVWSSGDLLATGSKDKSVILWRLN 395 (775)
T ss_pred CchhheeeeeecccCcEEEEecCCceEEEEEec
Confidence 33445555543 344 66778899999999663
No 199
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.28 E-value=3.8e-11 Score=112.18 Aligned_cols=270 Identities=12% Similarity=0.078 Sum_probs=180.3
Q ss_pred ecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCcccc
Q 002615 596 LADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFG 675 (900)
Q Consensus 596 ~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~ 675 (900)
.++|-+++..|.||.-..-+-+||.-+-+|..+...+....+..+.-.-..++.|=+-..||.-+|..+..+.. ..+.-
T Consensus 26 tp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~h-khivk 104 (334)
T KOG0278|consen 26 TPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEH-KHIVK 104 (334)
T ss_pred CCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhh-hheee
Confidence 35555677777787766666677776666665544444444433222233345555667788888887776653 34555
Q ss_pred CceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecC
Q 002615 676 SPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRT 754 (900)
Q Consensus 676 ~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~ 754 (900)
+.+++.+.+.|+.|+.+..+..||.+.. -.+.-.+..+...+.....+..+..++..+.++.|..|| .+|+++-++..
T Consensus 105 ~~af~~ds~~lltgg~ekllrvfdln~p-~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~ 183 (334)
T KOG0278|consen 105 AVAFSQDSNYLLTGGQEKLLRVFDLNRP-KAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF 183 (334)
T ss_pred eEEecccchhhhccchHHHhhhhhccCC-CCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec
Confidence 5666666788999998888888887752 223333333333344555666778888889999999999 99999988877
Q ss_pred CCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcE
Q 002615 755 GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSI 834 (900)
Q Consensus 755 ~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v 834 (900)
..++.+.- ...+|.++..++.+.|..||+++-.++-.++.+.++.+.... +..+.+++|.+++.+
T Consensus 184 ~s~VtSlE---vs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~------------P~k~~fVaGged~~~ 248 (334)
T KOG0278|consen 184 NSPVTSLE---VSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLH------------PKKEFFVAGGEDFKV 248 (334)
T ss_pred CCCCccee---eccCCCEEEEecCceeEEeccccccceeeccCcccccccccc------------CCCceEEecCcceEE
Confidence 77665544 334678888888999999999998888888888777554333 336888889999999
Q ss_pred EEEEeecCcccccccccccceeeeeee-c-cCCccccCceeeCCEEEE-eeeCCeEEEEEcccc
Q 002615 835 HILRVNLDVTGKENQSKDHMVQEFAKL-E-LQGDIFSSPVMIGGRVFV-GCRDDYIYCIALETQ 895 (900)
Q Consensus 835 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~-l~~~~~ss~~~~~~~l~v-g~~dg~l~~ld~~tg 895 (900)
|.||..+| ..+..+ + -+|.+-.--..-+|.+|. |+.||.|..|-...+
T Consensus 249 ~kfDy~Tg-------------eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 249 YKFDYNTG-------------EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred EEEeccCC-------------ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCC
Confidence 99999987 333332 1 122211100012566665 888999999965443
No 200
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.28 E-value=2.8e-10 Score=113.98 Aligned_cols=271 Identities=13% Similarity=0.079 Sum_probs=169.4
Q ss_pred CCceEEEEecCCCeEEEEECCC-CcE--EEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC-Cc
Q 002615 555 DSDIYLFVGSHSHKFICADAKR-SSV--LWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC-GE 630 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~t-G~~--~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~-~~ 630 (900)
..+.++..+|.|.+...|+... +++ ..+...+.....-...++|+.++++...+..+..||..+|.....+..+ +.
T Consensus 234 ~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~ 313 (519)
T KOG0293|consen 234 HNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGF 313 (519)
T ss_pred CCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCC
Confidence 3566777777776555454322 222 2222223333345678899889888888888999999999998777655 44
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEE--EeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceee
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCV--YKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~--w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
..++.++.+++..+++|+.|++++.||.. |+.+ |+..-. +-....++..++..++..+.+..+..|+..+. ...
T Consensus 314 S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~-~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~--~dr 389 (519)
T KOG0293|consen 314 SVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRD-PKVHDLAITYDGKYVLLVTVDKKIRLYNREAR--VDR 389 (519)
T ss_pred CcceeEEccCCceeEecCCCCcEEEecCC-cchhhccccccc-ceeEEEEEcCCCcEEEEEecccceeeechhhh--hhh
Confidence 45666788888889999999999999965 4443 432111 22333445555678888888888998887651 111
Q ss_pred eEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC--CceeccccccccCCCeEEEEeeCCeEEEEe
Q 002615 709 WLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG--GPIFAGPCTSFALPSQVLICSRNGSIYSFE 785 (900)
Q Consensus 709 w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~--~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d 785 (900)
-..... ..+.+..++.++..+.+.-.+..+..|| ...+++-++... +...--.|..-.++..|..|+.|+.||.|+
T Consensus 390 ~lise~-~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWh 468 (519)
T KOG0293|consen 390 GLISEE-QPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWH 468 (519)
T ss_pred cccccc-CceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEE
Confidence 111122 2235566666666666666677788887 544443333211 111111122233345788899999999999
Q ss_pred CCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 786 QESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 786 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
..+|+++-...-+.......... ..+...++.+++||+|++|.+.
T Consensus 469 r~sgkll~~LsGHs~~vNcVswN----------P~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 469 RISGKLLAVLSGHSKTVNCVSWN----------PADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ccCCceeEeecCCcceeeEEecC----------CCCHHHhhccCCCCeEEEecCC
Confidence 99999988776555332221111 1124567888999999999654
No 201
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.24 E-value=4.8e-10 Score=112.32 Aligned_cols=270 Identities=13% Similarity=0.049 Sum_probs=172.1
Q ss_pred eeEecCCCEEEEEeeCCEEEEEECC-CCc--EEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 593 AAVLADFSQVVVGCYKGKIYFLDYL-TGD--IYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 593 ~~~~~~~~~i~vg~~dg~l~~~d~~-tG~--~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
..++.+|.++..++.|.+...|... +++ +..+...+...++...++++++++++++.+..+..||..+|.+...+..
T Consensus 230 l~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~ 309 (519)
T KOG0293|consen 230 LQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPS 309 (519)
T ss_pred EEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhccc
Confidence 3556666777777777665555432 222 2333434445556667888889988888888899999999999887766
Q ss_pred C-CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCcee--eeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CC
Q 002615 670 G-GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHT--LWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SS 745 (900)
Q Consensus 670 ~-~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~--~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~ 745 (900)
+ +...++.+..+++-.+++|+.++.++.||.+ |.. .|+.... +.....++..++..++..+.|..+..++ .+
T Consensus 310 ~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD---gn~~~~W~gvr~-~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~ 385 (519)
T KOG0293|consen 310 GLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD---GNILGNWEGVRD-PKVHDLAITYDGKYVLLVTVDKKIRLYNREA 385 (519)
T ss_pred CcCCCcceeEEccCCceeEecCCCCcEEEecCC---cchhhccccccc-ceeEEEEEcCCCcEEEEEecccceeeechhh
Confidence 5 3444555666667889999999999999987 454 3544322 4446677788899999999999999998 43
Q ss_pred CCEEeeecCCCceeccccccccCCCeEE-EEeeCCeEEEEeCCCCceeeEEecCCc---eecccccccccccccccccCC
Q 002615 746 GSIIWRCRTGGPIFAGPCTSFALPSQVL-ICSRNGSIYSFEQESGNLLWEYSVGDP---ITASAYIDEHLQLKLESCLSI 821 (900)
Q Consensus 746 G~~~w~~~~~~~~~~~~~~~~~~~~~l~-~g~~dg~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 821 (900)
-..+-..+...++.+.. ...++.+. +.-.+..+..||.+..+++-+|.-+.. +..+-|-. .+
T Consensus 386 ~~dr~lise~~~its~~---iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg-----------~~ 451 (519)
T KOG0293|consen 386 RVDRGLISEEQPITSFS---ISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGG-----------GN 451 (519)
T ss_pred hhhhccccccCceeEEE---EcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCC-----------CC
Confidence 32222233444443332 22344444 444577888898887666555432221 11111111 12
Q ss_pred CeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCc---ccc-CceeeCCEEEEeeeCCeEEEEEccc
Q 002615 822 DRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGD---IFS-SPVMIGGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 822 ~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~s-s~~~~~~~l~vg~~dg~l~~ld~~t 894 (900)
+.++..|++|++||+|+..+| +++....-+.. .++ .|. +...+-.++.||.+.+|.+..
T Consensus 452 ~~fiaSGSED~kvyIWhr~sg-------------kll~~LsGHs~~vNcVswNP~-~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 452 DKFIASGSEDSKVYIWHRISG-------------KLLAVLSGHSKTVNCVSWNPA-DPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred cceEEecCCCceEEEEEccCC-------------ceeEeecCCcceeeEEecCCC-CHHHhhccCCCCeEEEecCCc
Confidence 579999999999999999877 44433322221 111 221 234566778899999998753
No 202
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.24 E-value=2.6e-11 Score=118.33 Aligned_cols=222 Identities=17% Similarity=0.134 Sum_probs=153.1
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFAS 720 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s 720 (900)
++.++.|..|.++..||.++-.++.+...+ .-+..++.-....++.|+.+.++..||.++ |+++-.+-.+-. ..
T Consensus 207 D~kiVSGlrDnTikiWD~n~~~c~~~L~GH--tGSVLCLqyd~rviisGSSDsTvrvWDv~t--ge~l~tlihHce--aV 280 (499)
T KOG0281|consen 207 DEKIVSGLRDNTIKIWDKNSLECLKILTGH--TGSVLCLQYDERVIVSGSSDSTVRVWDVNT--GEPLNTLIHHCE--AV 280 (499)
T ss_pred chhhhcccccCceEEeccccHHHHHhhhcC--CCcEEeeeccceEEEecCCCceEEEEeccC--CchhhHHhhhcc--ee
Confidence 466778889999999998887776655433 223345555456788899999999999998 887765433332 23
Q ss_pred eeeeeCCCEEEEEeecCcEEEEC-CCCC-E-EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEec
Q 002615 721 LCITSANRHVICCLVDGHVVALD-SSGS-I-IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSV 797 (900)
Q Consensus 721 ~~~~~~~~~i~~~~~~g~v~~~d-~~G~-~-~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~ 797 (900)
..+...+++++.++.|..+.+|| ..-. + +-+.-.+ ...+..++ ...+..|+.++.|.++..|+..|++++.++..
T Consensus 281 Lhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvG-HrAaVNvV-dfd~kyIVsASgDRTikvW~~st~efvRtl~g 358 (499)
T KOG0281|consen 281 LHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVV-DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG 358 (499)
T ss_pred EEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhh-hhhheeee-ccccceEEEecCCceEEEEeccceeeehhhhc
Confidence 34556789999999999898888 3221 1 1111111 11122222 22345788888999999999999999887765
Q ss_pred CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeCCE
Q 002615 798 GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIGGR 877 (900)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~~~ 877 (900)
+....+.. ...+.++..|+.|.+|++||...|. .+...+-+.+.+...-+++.+
T Consensus 359 HkRGIACl-------------QYr~rlvVSGSSDntIRlwdi~~G~-------------cLRvLeGHEeLvRciRFd~kr 412 (499)
T KOG0281|consen 359 HKRGIACL-------------QYRDRLVVSGSSDNTIRLWDIECGA-------------CLRVLEGHEELVRCIRFDNKR 412 (499)
T ss_pred ccccceeh-------------hccCeEEEecCCCceEEEEeccccH-------------HHHHHhchHHhhhheeecCce
Confidence 54433322 2238899999999999999999873 333333344556666678889
Q ss_pred EEEeeeCCeEEEEEccccc
Q 002615 878 VFVGCRDDYIYCIALETQH 896 (900)
Q Consensus 878 l~vg~~dg~l~~ld~~tg~ 896 (900)
++.|.+||.+..||+.++.
T Consensus 413 IVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 413 IVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred eeeccccceEEEEeccccc
Confidence 9999999999999998764
No 203
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.23 E-value=1.4e-09 Score=114.55 Aligned_cols=243 Identities=13% Similarity=0.087 Sum_probs=169.2
Q ss_pred cccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcE
Q 002615 542 ESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDI 621 (900)
Q Consensus 542 ~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~ 621 (900)
-+|||--|+ ...+..+-.+|.+..||.+|-.....+...+....++.+....+.+++|+.|..|..||..|++.
T Consensus 16 VKsVd~HPt------ePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ek 89 (794)
T KOG0276|consen 16 VKSVDFHPT------EPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEK 89 (794)
T ss_pred eeeeecCCC------CceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccccee
Confidence 356666664 44556666789999999998888777776654444555666667999999999999999999999
Q ss_pred EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC-eEEEeeccCCccccCceeecc-CCEEEEEeCCCcEEEEE
Q 002615 622 YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY-RCVYKLPCGGSIFGSPAIDEV-HDVLYVASTSGRLTAIS 699 (900)
Q Consensus 622 ~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g-~~~w~~~~~~~~~~~~~~~~~-~~~l~v~t~~g~l~~~~ 699 (900)
+..|..+....-+.++.+..-.++++|+|-.|.+||-+.+ .+...+..+.......++.+. .+....++.|+++..|+
T Consensus 90 V~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 90 VKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred eEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence 9999998887777788888899999999999999997654 344455555555555666553 35577788899999998
Q ss_pred cCCCCceeeeEeecCCcceeeeeeeeC--CCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEe
Q 002615 700 VKALPFHTLWLHELEVPAFASLCITSA--NRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICS 776 (900)
Q Consensus 700 ~~~~~g~~~w~~~~~~~~~~s~~~~~~--~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~ 776 (900)
+.. -.+..+.+.+............ .-+++.|+.|-.+-+|| ++...+-+......-.+..+. ...--.+..|+
T Consensus 170 lgs--~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~f-hp~lpiiisgs 246 (794)
T KOG0276|consen 170 LGS--PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFF-HPELPIIISGS 246 (794)
T ss_pred cCC--CCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEe-cCCCcEEEEec
Confidence 765 4555566555544444443322 23788888888888888 766555443321111111111 11112577889
Q ss_pred eCCeEEEEeCCCCceee
Q 002615 777 RNGSIYSFEQESGNLLW 793 (900)
Q Consensus 777 ~dg~l~~~d~~tG~~~w 793 (900)
.||++..|+..|-++.-
T Consensus 247 EDGTvriWhs~Ty~lE~ 263 (794)
T KOG0276|consen 247 EDGTVRIWNSKTYKLEK 263 (794)
T ss_pred CCccEEEecCcceehhh
Confidence 99999999988765443
No 204
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.23 E-value=2.9e-09 Score=102.80 Aligned_cols=272 Identities=12% Similarity=0.048 Sum_probs=172.9
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEEC-CCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDY-LTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~-~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
..+.+.++|..+..|++|..|+.|+. .+.+-.|..+.+...+.-.-+..++..|+.++.|.+++.||.++|+++.+++.
T Consensus 51 ~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~ 130 (338)
T KOG0265|consen 51 YTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKG 130 (338)
T ss_pred EEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcc
Confidence 35677888888999999999999993 33445677776655544445556778899999999999999999999999998
Q ss_pred CCccccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCC
Q 002615 670 GGSIFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGS 747 (900)
Q Consensus 670 ~~~~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~ 747 (900)
+..+..+..... ....|..++.+|++..||.+. ...+..+....+. .+..+....+.+++|..|+.|-.|| ..+.
T Consensus 131 h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~--k~~~~t~~~kyql-tAv~f~d~s~qv~sggIdn~ikvWd~r~~d 207 (338)
T KOG0265|consen 131 HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK--KEAIKTFENKYQL-TAVGFKDTSDQVISGGIDNDIKVWDLRKND 207 (338)
T ss_pred ccceeeecCccccCCeEEEecCCCceEEEEeecc--cchhhccccceeE-EEEEecccccceeeccccCceeeeccccCc
Confidence 877665544322 123456678899999999885 3333333222222 4555666678899999999999999 7777
Q ss_pred EEeeecCCC-ceeccccccccCCCeEEEEeeCCeEEEEeCCCCce----eeEEecCCceecccccccccccccccccCCC
Q 002615 748 IIWRCRTGG-PIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNL----LWEYSVGDPITASAYIDEHLQLKLESCLSID 822 (900)
Q Consensus 748 ~~w~~~~~~-~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~----~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (900)
..+..+... ++.... . .-.+..+..-+.|.++..||..--.. +-.+. ++ ...-..++...+..+.+
T Consensus 208 ~~~~lsGh~DtIt~ls-l-s~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~-g~------~hnfeknlL~cswsp~~ 278 (338)
T KOG0265|consen 208 GLYTLSGHADTITGLS-L-SRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQ-GH------IHNFEKNLLKCSWSPNG 278 (338)
T ss_pred ceEEeecccCceeeEE-e-ccCCCccccccccceEEEEEecccCCCCceEEEee-cc------hhhhhhhcceeeccCCC
Confidence 776655332 222211 1 11233455556788899988643111 11111 10 00011122233445568
Q ss_pred eEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccC--cee--eCCEEEEeeeCCeEEE
Q 002615 823 RLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSS--PVM--IGGRVFVGCRDDYIYC 889 (900)
Q Consensus 823 ~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss--~~~--~~~~l~vg~~dg~l~~ 889 (900)
..+-+|+.|..+|+||..+. .-.|++||..-+- ..+ ...-|..++.|..||.
T Consensus 279 ~~i~ags~dr~vyvwd~~~r---------------~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 279 TKITAGSADRFVYVWDTTSR---------------RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred CccccccccceEEEeecccc---------------cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 88999999999999998743 2345677643221 111 2345555666766664
No 205
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.23 E-value=3.8e-09 Score=115.69 Aligned_cols=299 Identities=11% Similarity=0.082 Sum_probs=199.6
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
..-.|.++-|+|.|..||-.-|.++-++.-++...-...+.+.+...+.|+.|-.|.+|+-++.+.+.+...+-...-..
T Consensus 20 ~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~ 99 (1202)
T KOG0292|consen 20 KRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTV 99 (1202)
T ss_pred CCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEe
Confidence 44556777899999999999999998888777666678888888888888899999999999988887766655555555
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC-
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE- 714 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~- 714 (900)
.+....-.|+.+|+|.+|..||-.+++++-....+.....+..+.+.++.|..++.|.++..||+.. -..-....+
T Consensus 100 ~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisG---LRkk~~~pg~ 176 (1202)
T KOG0292|consen 100 FFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISG---LRKKNKAPGS 176 (1202)
T ss_pred eccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecc---hhccCCCCCC
Confidence 6666667788999999999999999999988887776666666777678899999999999999752 111111000
Q ss_pred -----------Ccce------------------eeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCCceec--ccc
Q 002615 715 -----------VPAF------------------ASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFA--GPC 763 (900)
Q Consensus 715 -----------~~~~------------------~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~--~~~ 763 (900)
...+ .-.++.+..-.++.|+.|..|-+|.-+-...|+..+-...+. +.+
T Consensus 177 ~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssv 256 (1202)
T KOG0292|consen 177 LEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSV 256 (1202)
T ss_pred chhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceE
Confidence 0011 111222223456667777777777733345687764322111 111
Q ss_pred ccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCc
Q 002615 764 TSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDV 843 (900)
Q Consensus 764 ~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~ 843 (900)
+.....+.|+..+.|+.+.+||.+..+-+-++.-.+.-+-...... ...++++..|+++.+|..+-.
T Consensus 257 lfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP------------~lNLfAAgHDsGm~VFkleRE- 323 (1202)
T KOG0292|consen 257 LFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHP------------ELNLFAAGHDSGMIVFKLERE- 323 (1202)
T ss_pred EecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecC------------CcceeeeecCCceEEEEEccc-
Confidence 2222345677788999999999988777766655444322222222 345666667777888866511
Q ss_pred ccccccccccceeeeeeeccCCccccCceeeCCEEEEeeeCCeEEEEEcccc
Q 002615 844 TGKENQSKDHMVQEFAKLELQGDIFSSPVMIGGRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~~tg 895 (900)
. ...++.++.||..- +..|+.+|+.|.
T Consensus 324 --------------r----------pa~~v~~n~LfYvk-d~~i~~~d~~t~ 350 (1202)
T KOG0292|consen 324 --------------R----------PAYAVNGNGLFYVK-DRFIRSYDLRTQ 350 (1202)
T ss_pred --------------C----------ceEEEcCCEEEEEc-cceEEeeecccc
Confidence 0 01233555555554 677888887763
No 206
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.22 E-value=3.9e-09 Score=102.51 Aligned_cols=266 Identities=13% Similarity=0.123 Sum_probs=169.8
Q ss_pred EEEEecCCCeEEEEECCC------CcE------EEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEe
Q 002615 559 YLFVGSHSHKFICADAKR------SSV------LWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQ 626 (900)
Q Consensus 559 ~v~igs~~g~l~~~d~~t------G~~------~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~ 626 (900)
.+++|+..+.|+.+++.- ..+ +|.+..+..... ++..++.+++.|+.|.+|..||..+.+.+-..-
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sit--avAVs~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSIT--ALAVSGPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeecccccccccccee--EEEecceeEeccCCCCcEEEEeccchhhhccee
Confidence 578999999999987642 122 334444433222 344456689999999999999988876655544
Q ss_pred cCCceeeeeeEeCCC--CEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCC
Q 002615 627 TCGEVKCQPVVDAPR--QLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALP 704 (900)
Q Consensus 627 ~~~~~~~~~~~~~~~--~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~ 704 (900)
.+........+.... ..++.|+.||.+.+|+...-+++-.++.+..-.....+.+.+..-+.-..|+.+..||+-.
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~-- 158 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVR-- 158 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhc--
Confidence 444444444444432 3789999999999999888777666666544466666777555555566788999999887
Q ss_pred ceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEE
Q 002615 705 FHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYS 783 (900)
Q Consensus 705 g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~ 783 (900)
|+.-......... ......+.+++++++..+ .|-+|. .+-.+.-+......+.+ +.....+.+.+|..|+.+..
T Consensus 159 Gr~a~v~~L~~~a-t~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~---~~~l~~~~L~vG~d~~~i~~ 233 (362)
T KOG0294|consen 159 GRVAFVLNLKNKA-TLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENPKRILC---ATFLDGSELLVGGDNEWISL 233 (362)
T ss_pred CccceeeccCCcc-eeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcccccee---eeecCCceEEEecCCceEEE
Confidence 6655444443322 223445566666666543 344443 22222212222222333 33566788999999999999
Q ss_pred EeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 784 FEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 784 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
+|.+++.....+..+..-+-..+...+ ....++..++.||.|.+||.+..
T Consensus 234 ~D~ds~~~~~~~~AH~~RVK~i~~~~~---------~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 234 KDTDSDTPLTEFLAHENRVKDIASYTN---------PEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eccCCCccceeeecchhheeeeEEEec---------CCceEEEEeccCceEEEEEcccc
Confidence 999888877777665543333322110 11568889999999999998744
No 207
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.20 E-value=1.5e-09 Score=111.63 Aligned_cols=261 Identities=13% Similarity=0.099 Sum_probs=169.2
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCC
Q 002615 563 GSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQ 642 (900)
Q Consensus 563 gs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 642 (900)
.+++-++..|+..+-..+..+.--....+++.+-.||..+.+|...|.+..||.++..++-.+..+....-..-+.+.++
T Consensus 44 Vt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~ 123 (487)
T KOG0310|consen 44 VTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDN 123 (487)
T ss_pred EecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCC
Confidence 34456788999887666544333334456888888988888899999999999666444444444433222223333444
Q ss_pred -EEEEecCCCeEEEEECCCCeEEEeeccCCc-cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceee
Q 002615 643 -LIWCGSHDHNLYALDFRNYRCVYKLPCGGS-IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFAS 720 (900)
Q Consensus 643 -~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~-~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s 720 (900)
.+..|++|+.+..||..+..+......+.. +.+..+.+.++..++.|+.||.+..||.+..+ ..+.+++.+.|+ .+
T Consensus 124 t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pV-e~ 201 (487)
T KOG0310|consen 124 TMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPV-ES 201 (487)
T ss_pred eEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCce-ee
Confidence 455677788888899988876433333332 33333344444578889999999999998733 555566655554 45
Q ss_pred eeeeeCCCEEEEEeecCcEEEEC-CCCC-EEeeec-CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEec
Q 002615 721 LCITSANRHVICCLVDGHVVALD-SSGS-IIWRCR-TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSV 797 (900)
Q Consensus 721 ~~~~~~~~~i~~~~~~g~v~~~d-~~G~-~~w~~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~ 797 (900)
....+.+..+..++ ...+-+|| .+|. .+.... ....+.+. +... .+..|+.++-|+++.+||..+-+++.....
T Consensus 202 vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL-~l~s-~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~ 278 (487)
T KOG0310|consen 202 VLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCL-RLAS-DSTRLLSGSLDRHVKVFDTTNYKVVHSWKY 278 (487)
T ss_pred EEEcCCCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEE-Eeec-CCceEeecccccceEEEEccceEEEEeeec
Confidence 55555555555554 45788999 5454 333322 12222222 1111 346799999999999999888888877777
Q ss_pred CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 798 GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
++++.+....++ +..+++|-.+|.+.+-+..
T Consensus 279 ~~pvLsiavs~d------------d~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 279 PGPVLSIAVSPD------------DQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred ccceeeEEecCC------------CceEEEecccceeeeehhh
Confidence 888766655443 7899999999987766443
No 208
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.20 E-value=3.6e-10 Score=115.77 Aligned_cols=261 Identities=15% Similarity=0.170 Sum_probs=175.4
Q ss_pred ccccccceeeeeecCCccccccccccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCce--e
Q 002615 513 GNDLCGVNWSLEVPRNKRGFIQELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRI--E 590 (900)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~--~ 590 (900)
....|-+.|++..|.++...-++ =-.+-+.-+.+..+. .++..+++|..-.+|..||+.+-...-+..+...- -
T Consensus 437 gGkgcVKVWdis~pg~k~PvsqL-dcl~rdnyiRSckL~---pdgrtLivGGeastlsiWDLAapTprikaeltssapaC 512 (705)
T KOG0639|consen 437 GGKGCVKVWDISQPGNKSPVSQL-DCLNRDNYIRSCKLL---PDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC 512 (705)
T ss_pred cCCCeEEEeeccCCCCCCccccc-cccCcccceeeeEec---CCCceEEeccccceeeeeeccCCCcchhhhcCCcchhh
Confidence 35567778888877554321111 000112223322222 35678889988888999999876654443333321 1
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
....+++|.+..|..|.||.|..||+.+...+-+|+.+..-.++..+..++.+||+|+-|.+|.|||..+|..+.+.+..
T Consensus 513 yALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~ 592 (705)
T KOG0639|consen 513 YALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFS 592 (705)
T ss_pred hhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhh
Confidence 12346778888999999999999999999888888876665666677777889999999999999999999888877776
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
..+++--... .++.|.+|-.++.+..+... +...++...+...+.+..+..-+...+..+.|.-+.+|. .-|.-+
T Consensus 593 SQIfSLg~cP-~~dWlavGMens~vevlh~s---kp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasi 668 (705)
T KOG0639|consen 593 SQIFSLGYCP-TGDWLAVGMENSNVEVLHTS---KPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 668 (705)
T ss_pred hhheecccCC-CccceeeecccCcEEEEecC---CccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccce
Confidence 6666544333 36889999999999888755 555555555555555555655566666666788888888 778888
Q ss_pred eeecCCCceeccccccccCCCeEEEEeeCCeEEE
Q 002615 750 WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYS 783 (900)
Q Consensus 750 w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~ 783 (900)
++.+....+.+... ..++..|+.|+.|..-.+
T Consensus 669 FqskE~SsVlsCDI--S~ddkyIVTGSGdkkATV 700 (705)
T KOG0639|consen 669 FQSKESSSVLSCDI--SFDDKYIVTGSGDKKATV 700 (705)
T ss_pred eeccccCcceeeee--ccCceEEEecCCCcceEE
Confidence 88776666655441 223445666666644333
No 209
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=5.5e-09 Score=101.42 Aligned_cols=238 Identities=10% Similarity=0.063 Sum_probs=147.5
Q ss_pred eeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 590 ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
.++..+++..+.+.++++||.|..||....+.+-.+..+.++..+...+ ...+++|+-||.|..+|..+++....-..
T Consensus 16 IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~~~~~igth 93 (323)
T KOG1036|consen 16 ISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYDLNTGNEDQIGTH 93 (323)
T ss_pred eeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC--CceEEEeccCceEEEEEecCCcceeeccC
Confidence 3466677777889999999999999988877776777777766654433 46799999999999999999876543333
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCE
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSI 748 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~ 748 (900)
... ..+.......+.++.|++++.+..||+.. -...-..+....+ .+....++++++|+.+..+..|| .+-..
T Consensus 94 ~~~-i~ci~~~~~~~~vIsgsWD~~ik~wD~R~--~~~~~~~d~~kkV---y~~~v~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 94 DEG-IRCIEYSYEVGCVISGSWDKTIKFWDPRN--KVVVGTFDQGKKV---YCMDVSGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred CCc-eEEEEeeccCCeEEEcccCccEEEEeccc--cccccccccCceE---EEEeccCCEEEEeecCceEEEEEcccccc
Confidence 333 33333333458899999999999999874 2222222333322 23445688999999999999999 54443
Q ss_pred EeeecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCC----ceeeEEecCCc-----eecccccccccccccccc
Q 002615 749 IWRCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESG----NLLWEYSVGDP-----ITASAYIDEHLQLKLESC 818 (900)
Q Consensus 749 ~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG----~~~w~~~~~~~-----~~~~~~~~~~~~~~~~~~ 818 (900)
-.+.....--+..-|+... ...-.++++-+|.++.=..+.- +..+.++.+-. -..-|.- . ...
T Consensus 168 ~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVN--a-----i~F 240 (323)
T KOG1036|consen 168 PFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVN--A-----IAF 240 (323)
T ss_pred hhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEec--e-----eEe
Confidence 3332222111112222221 2345667788998876443333 22333332211 0000000 0 001
Q ss_pred cCCCeEEEEEcCCCcEEEEEeecC
Q 002615 819 LSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 819 ~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
.+.-+.++.|+.||.|.+||..+.
T Consensus 241 hp~~~tfaTgGsDG~V~~Wd~~~r 264 (323)
T KOG1036|consen 241 HPIHGTFATGGSDGIVNIWDLFNR 264 (323)
T ss_pred ccccceEEecCCCceEEEccCcch
Confidence 122567999999999999999865
No 210
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.19 E-value=4.4e-10 Score=105.20 Aligned_cols=267 Identities=12% Similarity=0.129 Sum_probs=174.8
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
+-+++.++.|+.=..-+.+||.-+-.+..+.....++++..+.-....++.|-+-..||+-||..+..|+.. .++-...
T Consensus 29 g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hk-hivk~~a 107 (334)
T KOG0278|consen 29 GYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHK-HIVKAVA 107 (334)
T ss_pred ceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhh-heeeeEE
Confidence 445556666665555566677644455555444445555555434455556666778999999998887654 4445556
Q ss_pred EeCCCCEEEEecCCCeEEEEECCCCeEE-Eeec-cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 637 VDAPRQLIWCGSHDHNLYALDFRNYRCV-YKLP-CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 637 ~~~~~~~i~~gs~dg~l~~~d~~~g~~~-w~~~-~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
++.+.++|++|+.+.-|..||.+.-+.- -.+. ..+.+.....+.. +..++..+.++.+..||..+ |+.+.+....
T Consensus 108 f~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~e-D~~iLSSadd~tVRLWD~rT--gt~v~sL~~~ 184 (334)
T KOG0278|consen 108 FSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHE-DKCILSSADDKTVRLWDHRT--GTEVQSLEFN 184 (334)
T ss_pred ecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEecc-CceEEeeccCCceEEEEecc--CcEEEEEecC
Confidence 7778889999999988888887642211 0111 1223333222332 46777778999999999998 9999888887
Q ss_pred CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceee
Q 002615 715 VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLW 793 (900)
Q Consensus 715 ~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w 793 (900)
.++ .+..+..+ +.++.-.+.+.|..+| .+-.++-.++.+-.+-+.. . .-..+..++|..|+.+|.||..||+.+-
T Consensus 185 s~V-tSlEvs~d-G~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SAS-L-~P~k~~fVaGged~~~~kfDy~TgeEi~ 260 (334)
T KOG0278|consen 185 SPV-TSLEVSQD-GRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESAS-L-HPKKEFFVAGGEDFKVYKFDYNTGEEIG 260 (334)
T ss_pred CCC-cceeeccC-CCEEEEecCceeEEeccccccceeeccCcccccccc-c-cCCCceEEecCcceEEEEEeccCCceee
Confidence 765 45555544 4555555778899999 6666666666555544332 1 1123567778889999999999998876
Q ss_pred EEe--cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCc
Q 002615 794 EYS--VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDV 843 (900)
Q Consensus 794 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~ 843 (900)
.+. ..+++.+.-+. +++....+|+.||.|++|....++
T Consensus 261 ~~nkgh~gpVhcVrFS------------PdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 261 SYNKGHFGPVHCVRFS------------PDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ecccCCCCceEEEEEC------------CCCceeeccCCCceEEEEEecCCC
Confidence 542 23344333332 237788889999999999887653
No 211
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.18 E-value=3.5e-08 Score=106.04 Aligned_cols=313 Identities=13% Similarity=0.116 Sum_probs=176.8
Q ss_pred eEEEEe-cCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 558 IYLFVG-SHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 558 ~~v~ig-s~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
+.+++. ..+|.|..+|..|.+++.++..+........+++|+.++|+.+.||.|..+|+.+++.+.++..+..... ..
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~-i~ 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRG-IA 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEE-EE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcce-EE
Confidence 344443 4578999999999999999988776655677889999999999999999999999999999988776554 45
Q ss_pred EeCCCCEEEEec-CCCeEEEEECCCCeEEEeeccCCccc-------cCceeeccCCEEEEE-eCCCcEEEEEcCCCCcee
Q 002615 637 VDAPRQLIWCGS-HDHNLYALDFRNYRCVYKLPCGGSIF-------GSPAIDEVHDVLYVA-STSGRLTAISVKALPFHT 707 (900)
Q Consensus 637 ~~~~~~~i~~gs-~dg~l~~~d~~~g~~~w~~~~~~~~~-------~~~~~~~~~~~l~v~-t~~g~l~~~~~~~~~g~~ 707 (900)
++.++.+++++. ..+.+..+|.++.+++..+..++... +.....+.....++. -..+.+..+|..+ .+.
T Consensus 85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d--~~~ 162 (369)
T PF02239_consen 85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD--PKN 162 (369)
T ss_dssp E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT--SSC
T ss_pred EcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc--ccc
Confidence 566778888876 46889999999999988776543211 111112212222222 2346677777655 232
Q ss_pred ee--EeecCCcceeeeeeeeCCCEEEEEe-ecCcEEEEC-CCCCEEeeecCCCceecccc--ccccCCCeEEEEeeCCeE
Q 002615 708 LW--LHELEVPAFASLCITSANRHVICCL-VDGHVVALD-SSGSIIWRCRTGGPIFAGPC--TSFALPSQVLICSRNGSI 781 (900)
Q Consensus 708 ~w--~~~~~~~~~~s~~~~~~~~~i~~~~-~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~--~~~~~~~~l~~g~~dg~l 781 (900)
+. ..+.... .....+.+++.+++++. .+..+.++| .++++++....+......+. +.....+.+|..+..+..
T Consensus 163 ~~~~~i~~g~~-~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~ 241 (369)
T PF02239_consen 163 LKVTTIKVGRF-PHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYF 241 (369)
T ss_dssp EEEEEEE--TT-EEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSS
T ss_pred cceeeeccccc-ccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccce
Confidence 22 2222221 23344555566666653 456788899 88888877665432222111 112233456665544322
Q ss_pred E--E--------EeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEE----cCCCcEEEEEeecCccccc
Q 002615 782 Y--S--------FEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCIC----TSSGSIHILRVNLDVTGKE 847 (900)
Q Consensus 782 ~--~--------~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g----~~~G~v~~~d~~~~~~~~~ 847 (900)
. . ++..+-+++-+++..+...... ..+++.++|+. ...+.|.++|.++-
T Consensus 242 ~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~------------thP~s~~vwvd~~~~~~~~~v~viD~~tl----- 304 (369)
T PF02239_consen 242 AIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIK------------THPDSRYVWVDTFLNPDADTVQVIDKKTL----- 304 (369)
T ss_dssp EEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--------------TT-SEEEEE-TT-SSHT-EEEEECCGT-----
T ss_pred ecccccCCccccchhhcCeEEEEEECCCCcceee------------cCCCCccEEeeccCCCCCceEEEEECcCc-----
Confidence 1 2 3333334444555443321111 13347899998 45678999998854
Q ss_pred ccccccceeeeeeecc-CCccccCcee--eCCEEEEeeeCCe--EEEEEcccccccc
Q 002615 848 NQSKDHMVQEFAKLEL-QGDIFSSPVM--IGGRVFVGCRDDY--IYCIALETQHLEE 899 (900)
Q Consensus 848 ~~~~~~~~~~~~~~~l-~~~~~ss~~~--~~~~l~vg~~dg~--l~~ld~~tg~~~~ 899 (900)
+....+.. ++.-.-.+-+ ++.++|+..+++. |..||.+|.++.+
T Consensus 305 --------~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~ 353 (369)
T PF02239_consen 305 --------KVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKK 353 (369)
T ss_dssp --------EEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred --------ceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEE
Confidence 22222211 1100111112 5789999988655 9999999988754
No 212
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.18 E-value=3e-09 Score=112.19 Aligned_cols=237 Identities=10% Similarity=0.075 Sum_probs=168.7
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
++-+.+....+..+-++|.+..||-+|-.....++..+...-+..+...++-|++|++|..|..|+..|++.+..+..+.
T Consensus 18 sVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~ 97 (794)
T KOG0276|consen 18 SVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHS 97 (794)
T ss_pred eeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccc
Confidence 44555666678888999999999999988888888765444444455567889999999999999999999999999998
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeC-CCEEEEEeecCcEEEEC-CCCCEE
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSA-NRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~-~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
..+.+.++.+..-.++.++.|-.+.+||-+. .-.....++.+.......++.+. .+.+..++-|+++-+|. .+....
T Consensus 98 DyIR~iavHPt~P~vLtsSDDm~iKlW~we~-~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~n 176 (794)
T KOG0276|consen 98 DYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN-EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPN 176 (794)
T ss_pred cceeeeeecCCCCeEEecCCccEEEEeeccC-ceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCc
Confidence 8888888888777888889899999998664 01122233334433344445443 45677778888888887 444444
Q ss_pred eeecCCCceeccccccccCCC---eEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEE
Q 002615 750 WRCRTGGPIFAGPCTSFALPS---QVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVC 826 (900)
Q Consensus 750 w~~~~~~~~~~~~~~~~~~~~---~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 826 (900)
++++. .--...|+.....+ .++.|+.|..+.+||.+|.+.+-+.+-+...++..++... -..++
T Consensus 177 fTl~g--HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~-----------lpiii 243 (794)
T KOG0276|consen 177 FTLEG--HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE-----------LPIII 243 (794)
T ss_pred eeeec--cccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC-----------CcEEE
Confidence 44442 22223333333333 7888999999999999998877666655544444444432 56899
Q ss_pred EEcCCCcEEEEEeecC
Q 002615 827 ICTSSGSIHILRVNLD 842 (900)
Q Consensus 827 ~g~~~G~v~~~d~~~~ 842 (900)
.|++||++++|+..+-
T Consensus 244 sgsEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 244 SGSEDGTVRIWNSKTY 259 (794)
T ss_pred EecCCccEEEecCcce
Confidence 9999999999987653
No 213
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.17 E-value=1.9e-09 Score=106.66 Aligned_cols=273 Identities=11% Similarity=0.072 Sum_probs=170.0
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCC-cEEEEEecCCcee
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTG-DIYWTFQTCGEVK 632 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG-~~~w~~~~~~~~~ 632 (900)
+...-.++.+|.++.|++||..||++.-....+..-.....+...|.+++..+.|-.+..||.++- +.+.....+....
T Consensus 117 hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~v 196 (406)
T KOG0295|consen 117 HPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGV 196 (406)
T ss_pred ccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccce
Confidence 333455777888999999999999986555544433345667777766666666655677775542 1122222345666
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCce------
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFH------ 706 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~------ 706 (900)
+++.+-+.+..|..++.|.++..|+..+|.++..+..+....-...+..++-.+..++.+.++..|-..+..-+
T Consensus 197 S~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~h 276 (406)
T KOG0295|consen 197 SSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREH 276 (406)
T ss_pred eeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcc
Confidence 77777777888999999999999999999999988776554333334432223334556778888887762111
Q ss_pred ------eeeEeecCCcceeeeeeee-CCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeC
Q 002615 707 ------TLWLHELEVPAFASLCITS-ANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRN 778 (900)
Q Consensus 707 ------~~w~~~~~~~~~~s~~~~~-~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~d 778 (900)
+.|......+......... .+..+..++.|+.|..+| .+|..+.++...++-.....+. ..+..|+.+..|
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~-p~Gkyi~ScaDD 355 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFS-PGGKYILSCADD 355 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEc-CCCeEEEEEecC
Confidence 1121111111100000101 123677888999999999 9999988876544322222111 124567778889
Q ss_pred CeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 779 GSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 779 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
+.|.+||.++++..-..+.+.....+.-+..+ ..++..|+-+-.+.+|.
T Consensus 356 ktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~-----------~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 356 KTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKT-----------APYVVTGSVDQTVKVWE 404 (406)
T ss_pred CcEEEEEeccceeeeccCCCcceeEEEecCCC-----------CceEEeccccceeeeee
Confidence 99999999999887666555554444333321 34677777666666664
No 214
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.16 E-value=1.7e-08 Score=100.54 Aligned_cols=265 Identities=13% Similarity=0.092 Sum_probs=168.2
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCc-eeeceeEecCC--CEEEEEeeCCEEEEEECCCCcEEE----EEecCC
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGR-IECSAAVLADF--SQVVVGCYKGKIYFLDYLTGDIYW----TFQTCG 629 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~~~~--~~i~vg~~dg~l~~~d~~tG~~~w----~~~~~~ 629 (900)
.+.|+.|+.||.+..||.. |+.......+.. +...+-+..+. ..+++++.|.+|..|-.+.|+..- ....+.
T Consensus 115 ~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk 193 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHK 193 (423)
T ss_pred CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccc
Confidence 5678999999999999976 888877766544 33223333322 247788889988777665554321 112333
Q ss_pred ceeeeeeEeCCCCEEEEecCCCeEEEEECCC-----CeEEE------------------eeccCC--ccccCceeeccCC
Q 002615 630 EVKCQPVVDAPRQLIWCGSHDHNLYALDFRN-----YRCVY------------------KLPCGG--SIFGSPAIDEVHD 684 (900)
Q Consensus 630 ~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~-----g~~~w------------------~~~~~~--~~~~~~~~~~~~~ 684 (900)
..+.+..+..++..+..|++|..|-.|+..+ ++-.- ...+.| ...++....+ ..
T Consensus 194 ~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~ 272 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-AT 272 (423)
T ss_pred cceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CC
Confidence 3444444555677888899999999999221 00000 001111 2233333333 68
Q ss_pred EEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C--CCCEE-eeecCCCceec
Q 002615 685 VLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S--SGSII-WRCRTGGPIFA 760 (900)
Q Consensus 685 ~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~--~G~~~-w~~~~~~~~~~ 760 (900)
.+|.+++|..|..||+.+ |...-+...+... .+.........+.+|+.+..+.++| . +|..+ .++..... +.
T Consensus 273 v~yS~SwDHTIk~WDlet--g~~~~~~~~~ksl-~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~n-wV 348 (423)
T KOG0313|consen 273 VIYSVSWDHTIKVWDLET--GGLKSTLTTNKSL-NCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKN-WV 348 (423)
T ss_pred ceEeecccceEEEEEeec--ccceeeeecCcce-eEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchh-hh
Confidence 899999999999999998 7777666655544 4555555677899999999999999 4 44443 33322222 22
Q ss_pred cccc-cccCCCeEEEEeeCCeEEEEeCCCCc-eeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 761 GPCT-SFALPSQVLICSRNGSIYSFEQESGN-LLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 761 ~~~~-~~~~~~~l~~g~~dg~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
+.+. .......+..|++|+.+..||..+-+ .++.+..+..-....-..+ +..|+.|+.|.+|+++.
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~------------~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE------------GGLIVSGGADNKLRIFK 416 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC------------CceEEeccCcceEEEec
Confidence 2111 12234467788999999999998876 6666655544333332222 56888999999998885
Q ss_pred e
Q 002615 839 V 839 (900)
Q Consensus 839 ~ 839 (900)
.
T Consensus 417 ~ 417 (423)
T KOG0313|consen 417 G 417 (423)
T ss_pred c
Confidence 4
No 215
>PTZ00421 coronin; Provisional
Probab=99.16 E-value=3.4e-08 Score=109.92 Aligned_cols=204 Identities=13% Similarity=0.031 Sum_probs=133.1
Q ss_pred eeceeEec-CCCEEEEEeeCCEEEEEECCCCc-------EEEEEecCCceeeeeeEeCC-CCEEEEecCCCeEEEEECCC
Q 002615 590 ECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGD-------IYWTFQTCGEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRN 660 (900)
Q Consensus 590 ~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~-------~~w~~~~~~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~ 660 (900)
.....+++ ++..+++|+.||.|..||..++. .+..+..+........+.+. .+.+++++.|+.|..||..+
T Consensus 78 V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t 157 (493)
T PTZ00421 78 IIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER 157 (493)
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC
Confidence 34566776 66789999999999999987653 23344444444444556654 36788999999999999999
Q ss_pred CeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc-eeeeeeeeCCCEEEEEe----e
Q 002615 661 YRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA-FASLCITSANRHVICCL----V 735 (900)
Q Consensus 661 g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~-~~s~~~~~~~~~i~~~~----~ 735 (900)
++.+..+..+.....+..+.+++..++.++.+|.+..||+++ ++.+.....+... .........++.++.++ .
T Consensus 158 g~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs--g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~ 235 (493)
T PTZ00421 158 GKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD--GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQ 235 (493)
T ss_pred CeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC--CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCC
Confidence 988777765554455555666667888999999999999987 7777666544322 12233344455665543 3
Q ss_pred cCcEEEEC-CCCC-EEeeecCCC-ceeccccccccCCCeEEEEee-CCeEEEEeCCCCceeeEEe
Q 002615 736 DGHVVALD-SSGS-IIWRCRTGG-PIFAGPCTSFALPSQVLICSR-NGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 736 ~g~v~~~d-~~G~-~~w~~~~~~-~~~~~~~~~~~~~~~l~~g~~-dg~l~~~d~~tG~~~w~~~ 796 (900)
++.+..|| .+.. .+....... .....+. .....+.+++++. ||.|++||..++++.....
T Consensus 236 Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~-~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 236 QRQIMLWDTRKMASPYSTVDLDQSSALFIPF-FDEDTNLLYIGSKGEGNIRCFELMNERLTFCSS 299 (493)
T ss_pred CCeEEEEeCCCCCCceeEeccCCCCceEEEE-EcCCCCEEEEEEeCCCeEEEEEeeCCceEEEee
Confidence 67899999 5443 322222111 1111111 1122446777764 9999999999998765443
No 216
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.15 E-value=3.9e-09 Score=112.96 Aligned_cols=262 Identities=15% Similarity=0.184 Sum_probs=170.9
Q ss_pred cCCCEEEEEeeCCEEEEEECCCCcEEEE--EecCCce-eeeeeEe-CCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc
Q 002615 597 ADFSQVVVGCYKGKIYFLDYLTGDIYWT--FQTCGEV-KCQPVVD-APRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS 672 (900)
Q Consensus 597 ~~~~~i~vg~~dg~l~~~d~~tG~~~w~--~~~~~~~-~~~~~~~-~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~ 672 (900)
.++..+..++.||++..|+...++-+-+ +..+... ..+.++. .+++.+++|+.|+.+..|...+..++..+..+..
T Consensus 23 ~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~s 102 (745)
T KOG0301|consen 23 TDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKS 102 (745)
T ss_pred cCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhcccc
Confidence 3445688888899999999655443321 2222222 2222332 3567799999999999999999888887776665
Q ss_pred cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeee
Q 002615 673 IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRC 752 (900)
Q Consensus 673 ~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~ 752 (900)
...+..+.. .+.++.|++|.++..|-.. +.......+....-.....+ .+.++.|+.|..|..|.. |+.+-++
T Consensus 103 nVC~ls~~~-~~~~iSgSWD~TakvW~~~----~l~~~l~gH~asVWAv~~l~-e~~~vTgsaDKtIklWk~-~~~l~tf 175 (745)
T KOG0301|consen 103 NVCSLSIGE-DGTLISGSWDSTAKVWRIG----ELVYSLQGHTASVWAVASLP-ENTYVTGSADKTIKLWKG-GTLLKTF 175 (745)
T ss_pred ceeeeecCC-cCceEecccccceEEecch----hhhcccCCcchheeeeeecC-CCcEEeccCcceeeeccC-Cchhhhh
Confidence 555444333 4668999999998888643 22222222222222222233 347888888988888863 4444333
Q ss_pred cCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCC
Q 002615 753 RTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSG 832 (900)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G 832 (900)
+......-. +....+..+..++.||.|..|+. +|+.+.++.-+.....+.. ...+++.++.+++|+
T Consensus 176 ~gHtD~VRg--L~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis-----------~~~~~~~Ivs~gEDr 241 (745)
T KOG0301|consen 176 SGHTDCVRG--LAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSIS-----------MALSDGLIVSTGEDR 241 (745)
T ss_pred ccchhheee--eEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEE-----------ecCCCCeEEEecCCc
Confidence 321111111 12334557888999999999997 6777766654444322221 122388999999999
Q ss_pred cEEEEEeecCcccccccccccceeeeeeeccCC-ccccCceeeCCEEEEeeeCCeEEEEEccc
Q 002615 833 SIHILRVNLDVTGKENQSKDHMVQEFAKLELQG-DIFSSPVMIGGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 833 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ss~~~~~~~l~vg~~dg~l~~ld~~t 894 (900)
++++|+.. ...+...+|+ .+++.-+..++.|++||.||.+|+|....
T Consensus 242 tlriW~~~---------------e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 242 TLRIWKKD---------------ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred eEEEeecC---------------ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 99999875 4556678888 66776777799999999999999997653
No 217
>PTZ00420 coronin; Provisional
Probab=99.14 E-value=2.4e-08 Score=111.61 Aligned_cols=225 Identities=9% Similarity=0.003 Sum_probs=143.2
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCceeeceeEecC-CCEEEEEeeCCEEEEEECCCCcE--------EEEEecCCceee
Q 002615 563 GSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLAD-FSQVVVGCYKGKIYFLDYLTGDI--------YWTFQTCGEVKC 633 (900)
Q Consensus 563 gs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~-~~~i~vg~~dg~l~~~d~~tG~~--------~w~~~~~~~~~~ 633 (900)
|+..+.+..|+..+...+..+..+........+.++ +..+++|+.||.|..||..++.. ...+..+.....
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 334566777777666666666666554456677775 57899999999999999876532 223333444444
Q ss_pred eeeEeCCCCEE-EEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee
Q 002615 634 QPVVDAPRQLI-WCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE 712 (900)
Q Consensus 634 ~~~~~~~~~~i-~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~ 712 (900)
...+.++...+ .+++.|+.|..||..+++.++.+.... ...+..+..++..+.+++.++.+..||+.+ ++.+..+.
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~-~V~SlswspdG~lLat~s~D~~IrIwD~Rs--g~~i~tl~ 206 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPK-KLSSLKWNIKGNLLSGTCVGKHMHIIDPRK--QEIASSFH 206 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCC-cEEEEEECCCCCEEEEEecCCEEEEEECCC--CcEEEEEe
Confidence 55666655554 578899999999999998887765443 334455566566777777899999999998 77776665
Q ss_pred cCCcceeeee-----eeeCCCEEEEEeecC----cEEEEC-C-CCCEEeeecCCCceec-cccccccCCCe-EEEEeeCC
Q 002615 713 LEVPAFASLC-----ITSANRHVICCLVDG----HVVALD-S-SGSIIWRCRTGGPIFA-GPCTSFALPSQ-VLICSRNG 779 (900)
Q Consensus 713 ~~~~~~~s~~-----~~~~~~~i~~~~~~g----~v~~~d-~-~G~~~w~~~~~~~~~~-~~~~~~~~~~~-l~~g~~dg 779 (900)
.+.....+.. +..+++.+++++.++ .+..|| . .++.+-.......... .|.. ....+. +++|..|+
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~-D~~tg~l~lsGkGD~ 285 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY-DESTGLIYLIGKGDG 285 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee-eCCCCCEEEEEECCC
Confidence 5433221211 124566777766654 689999 5 3555544332221111 1111 112344 45677899
Q ss_pred eEEEEeCCCCce
Q 002615 780 SIYSFEQESGNL 791 (900)
Q Consensus 780 ~l~~~d~~tG~~ 791 (900)
.+++|+..++.+
T Consensus 286 tIr~~e~~~~~~ 297 (568)
T PTZ00420 286 NCRYYQHSLGSI 297 (568)
T ss_pred eEEEEEccCCcE
Confidence 999999988764
No 218
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.14 E-value=2.9e-09 Score=109.53 Aligned_cols=272 Identities=12% Similarity=0.074 Sum_probs=169.8
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
++.++++...+=++-+..-.+..|+..+-....++.-=....++..+-.++..+.+|...|.+..||.++...+..+..+
T Consensus 30 ssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah 109 (487)
T KOG0310|consen 30 SSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAH 109 (487)
T ss_pred eeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhc
Confidence 45566653332233333456788887776555433221233455556556677777888899999997765454444444
Q ss_pred CccccCceeeccCC-EEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCC-EEEEEeecCcEEEEC-C-CC
Q 002615 671 GSIFGSPAIDEVHD-VLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANR-HVICCLVDGHVVALD-S-SG 746 (900)
Q Consensus 671 ~~~~~~~~~~~~~~-~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~-~i~~~~~~g~v~~~d-~-~G 746 (900)
....-..-+.+.++ .+..|++++.+..||+++ +........+....-+..+.+.++ .++.|++||.|..|| . .+
T Consensus 110 ~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~--a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~ 187 (487)
T KOG0310|consen 110 QAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST--AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT 187 (487)
T ss_pred cCceeEEEecccCCeEEEecCCCceEEEEEcCC--cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC
Confidence 33222222222234 455566777777888887 544334444444444555555444 688899999999999 3 34
Q ss_pred CEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc-eeeEEecCC-ceecccccccccccccccccCCCeE
Q 002615 747 SIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN-LLWEYSVGD-PITASAYIDEHLQLKLESCLSIDRL 824 (900)
Q Consensus 747 ~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~-~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (900)
..+.+++.+.|+-+.. ...++.+++...+..+.+||..+|. ++-....+. .+++..+..+ +..
T Consensus 188 ~~v~elnhg~pVe~vl---~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~------------~~r 252 (487)
T KOG0310|consen 188 SRVVELNHGCPVESVL---ALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASD------------STR 252 (487)
T ss_pred ceeEEecCCCceeeEE---EcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecC------------Cce
Confidence 6677777777765443 3335567777777789999998664 443333233 3333332222 689
Q ss_pred EEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee-eCCEEEEeeeCCeEEEEEc
Q 002615 825 VCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM-IGGRVFVGCRDDYIYCIAL 892 (900)
Q Consensus 825 l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~-~~~~l~vg~~dg~l~~ld~ 892 (900)
++.++-||.+.+||..+- ++....+.++.+.+..+. .+..+++|-.||.+..-+.
T Consensus 253 LlS~sLD~~VKVfd~t~~-------------Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 253 LLSGSLDRHVKVFDTTNY-------------KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred EeecccccceEEEEccce-------------EEEEeeecccceeeEEecCCCceEEEecccceeeeehh
Confidence 999999999999996543 677777888887775554 3578999999988776643
No 219
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.14 E-value=2.5e-09 Score=109.36 Aligned_cols=271 Identities=14% Similarity=0.111 Sum_probs=161.3
Q ss_pred CEEEEEECCCCcEEEEEecCCceee--eeeEeCCCCEEEEecCC-CeEEEEECCCCeEE-EeeccCCccccCceeeccCC
Q 002615 609 GKIYFLDYLTGDIYWTFQTCGEVKC--QPVVDAPRQLIWCGSHD-HNLYALDFRNYRCV-YKLPCGGSIFGSPAIDEVHD 684 (900)
Q Consensus 609 g~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~~~~~~i~~gs~d-g~l~~~d~~~g~~~-w~~~~~~~~~~~~~~~~~~~ 684 (900)
..+.+||++||...|+|........ ..++. ..++..+... ..|..|........ .+.-++|.+.+- ...+.+.
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~--~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al-~s~n~G~ 94 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTALN--NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHAL-ASSNLGY 94 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhhc--hhheeeecccCccccccccCchhhhhhhcccccceeee-ecCCCce
Confidence 4588999999999999986533221 12222 2445555433 23555544322211 233334444332 2333345
Q ss_pred EEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C-------CC--CEEeeecC
Q 002615 685 VLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S-------SG--SIIWRCRT 754 (900)
Q Consensus 685 ~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-------~G--~~~w~~~~ 754 (900)
.|+.||..|.+|+|.+++ |..+-....+-.......+..++..++.|+.||.|.+|. . ++ +.+..+..
T Consensus 95 ~l~ag~i~g~lYlWelss--G~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~ 172 (476)
T KOG0646|consen 95 FLLAGTISGNLYLWELSS--GILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSD 172 (476)
T ss_pred EEEeecccCcEEEEEecc--ccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeecc
Confidence 566666999999999998 887765555544445666777888999999999998875 2 11 11211111
Q ss_pred CC-ceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCc
Q 002615 755 GG-PIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGS 833 (900)
Q Consensus 755 ~~-~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~ 833 (900)
.. ++...-+.....+..+|..+.|..+.+||...|.++-++..+..+.+...- +.+..+|+|+.+|.
T Consensus 173 HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lD------------pae~~~yiGt~~G~ 240 (476)
T KOG0646|consen 173 HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALD------------PAERVVYIGTEEGK 240 (476)
T ss_pred CcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEc------------ccccEEEecCCcce
Confidence 11 111111111223568999999999999999999999888777766544322 22899999999999
Q ss_pred EEEEEeecCcccccc----cccccceeeeeeeccCC--ccccCcee--eCCEEEEeeeCCeEEEEEcccccc
Q 002615 834 IHILRVNLDVTGKEN----QSKDHMVQEFAKLELQG--DIFSSPVM--IGGRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 834 v~~~d~~~~~~~~~~----~~~~~~~~~~~~~~l~~--~~~ss~~~--~~~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
|++.+...-. ++.. .........+..+.-+. ..++...+ ++..|..|+.||.+-.||..+.+.
T Consensus 241 I~~~~~~~~~-~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~ 311 (476)
T KOG0646|consen 241 IFQNLLFKLS-GQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQC 311 (476)
T ss_pred EEeeehhcCC-cccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHH
Confidence 9998775321 1110 00000001111111111 23444444 567888899999999999876553
No 220
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.14 E-value=5e-10 Score=112.19 Aligned_cols=275 Identities=11% Similarity=0.010 Sum_probs=183.8
Q ss_pred eEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCC
Q 002615 550 LVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCG 629 (900)
Q Consensus 550 ~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~ 629 (900)
.|.-..++.+|.+||.+|.+..|+..+=.+.--...++....+..++.++.+++.|..+|.|..|++.-..++-....+.
T Consensus 101 ~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~ 180 (464)
T KOG0284|consen 101 VVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHA 180 (464)
T ss_pred eEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhh
Confidence 33344567899999999999999874322211123455566678889999999999999999999865433322222232
Q ss_pred ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee
Q 002615 630 EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 630 ~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w 709 (900)
+......+.+.+..+..+|.||.|..||-.-.+.-.....+|.-.-+..-.+..+.|+.++.+..+..||+++ |+.+-
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS--g~cl~ 258 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS--GSCLA 258 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC--cchhh
Confidence 3333445666677788899999999999877666555555555555555555568899999999999999998 98887
Q ss_pred EeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-eeccccccccCCCeEEEEeeCCeEEEEeCC
Q 002615 710 LHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-IFAGPCTSFALPSQVLICSRNGSIYSFEQE 787 (900)
Q Consensus 710 ~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~ 787 (900)
+...++.......+...++.+..++.|..+.+|| .+-+.+..+..... +.+.. ......+.+..|+.||.|+.|...
T Consensus 259 tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~-WhP~~~~lftsgg~Dgsvvh~~v~ 337 (464)
T KOG0284|consen 259 TLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT-WHPLNESLFTSGGSDGSVVHWVVG 337 (464)
T ss_pred hhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec-cccccccceeeccCCCceEEEecc
Confidence 7777776666667777788899999999999999 65555555542221 11111 112234567778889999888765
Q ss_pred CCceeeEEecC--CceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 788 SGNLLWEYSVG--DPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 788 tG~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
.-+.+-..... ..+.+.. ..+.+..++.|+.|..+..|..
T Consensus 338 ~~~p~~~i~~AHd~~iwsl~------------~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 338 LEEPLGEIPPAHDGEIWSLA------------YHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred ccccccCCCcccccceeeee------------ccccceeEeecCCCcceeeecc
Confidence 32322221111 1122211 2334889999999999988854
No 221
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.14 E-value=3.4e-08 Score=108.09 Aligned_cols=311 Identities=14% Similarity=0.147 Sum_probs=185.8
Q ss_pred cccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecC-CceeeceeEecCCCE-EEEEeeCCEEEEEECCCCcE
Q 002615 544 CVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLE-GRIECSAAVLADFSQ-VVVGCYKGKIYFLDYLTGDI 621 (900)
Q Consensus 544 ~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~-i~vg~~dg~l~~~d~~tG~~ 621 (900)
++..+|++ +.|.+|..+|.|..+|.+.++.+-+++.. +++ ++..+..||.. +.+|+..|.+..||++..+.
T Consensus 207 ~ieqsPaL------DVVaiG~~~G~ViifNlK~dkil~sFk~d~g~V-tslSFrtDG~p~las~~~~G~m~~wDLe~kkl 279 (910)
T KOG1539|consen 207 AIEQSPAL------DVVAIGLENGTVIIFNLKFDKILMSFKQDWGRV-TSLSFRTDGNPLLASGRSNGDMAFWDLEKKKL 279 (910)
T ss_pred EeccCCcc------eEEEEeccCceEEEEEcccCcEEEEEEccccce-eEEEeccCCCeeEEeccCCceEEEEEcCCCee
Confidence 44556765 67999999999999999999999999886 555 46667666654 56677779999999998888
Q ss_pred EEEEe-cCCceeeeeeEeCCCCEEEEecCCCeE--EEEECCCC-------------------------eE----------
Q 002615 622 YWTFQ-TCGEVKCQPVVDAPRQLIWCGSHDHNL--YALDFRNY-------------------------RC---------- 663 (900)
Q Consensus 622 ~w~~~-~~~~~~~~~~~~~~~~~i~~gs~dg~l--~~~d~~~g-------------------------~~---------- 663 (900)
.|... .+........+-+....++..+.|+.+ +.+|..+| ..
T Consensus 280 ~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~ 359 (910)
T KOG1539|consen 280 INVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTL 359 (910)
T ss_pred eeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcch
Confidence 88654 221111111111111122222222111 11120000 00
Q ss_pred ------------------------------------------------------------------EEeeccC--C----
Q 002615 664 ------------------------------------------------------------------VYKLPCG--G---- 671 (900)
Q Consensus 664 ------------------------------------------------------------------~w~~~~~--~---- 671 (900)
.|.+... |
T Consensus 360 r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L 439 (910)
T KOG1539|consen 360 RSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVL 439 (910)
T ss_pred hhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEe
Confidence 0111100 0
Q ss_pred ---------ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee---cCCcceeeeeeeeCCCEEEEEeecCcE
Q 002615 672 ---------SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE---LEVPAFASLCITSANRHVICCLVDGHV 739 (900)
Q Consensus 672 ---------~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~---~~~~~~~s~~~~~~~~~i~~~~~~g~v 739 (900)
....+.+++.=++..++|+..|.|-.||.++ |-..-++. .+.......++..-+..++.++.+|-+
T Consensus 440 ~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS--Gi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gil 517 (910)
T KOG1539|consen 440 DPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQS--GIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGIL 517 (910)
T ss_pred cCccccccCcceEEEEEeccCceEEEeccCCeEEEEEccc--CeeecccccCccccCceeEEEecCCCceEEEccCcceE
Confidence 0011222333356688899999999999997 76655552 233333444554456678888899999
Q ss_pred EEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCC-ceeccccccccccccccc
Q 002615 740 VALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGD-PITASAYIDEHLQLKLES 817 (900)
Q Consensus 740 ~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~~~~~~~~~ 817 (900)
..|| .++.++-+...+..+... +..-..+.+.++..|=.|..+|..|-++..++..++ .+....+..+
T Consensus 518 kfw~f~~k~l~~~l~l~~~~~~i--v~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~D-------- 587 (910)
T KOG1539|consen 518 KFWDFKKKVLKKSLRLGSSITGI--VYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPD-------- 587 (910)
T ss_pred EEEecCCcceeeeeccCCCccee--eeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCC--------
Confidence 9999 666655555444332111 111123456666777789999999888877766443 4443333333
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccc---cCceeeCCEEEEeeeC-CeEEEEEc
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIF---SSPVMIGGRVFVGCRD-DYIYCIAL 892 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---ss~~~~~~~l~vg~~d-g~l~~ld~ 892 (900)
++++++++.|+.|++||.-++ .++..+.+..... .+| .++.|.....| ++||.|..
T Consensus 588 ----grWlisasmD~tIr~wDlpt~-------------~lID~~~vd~~~~sls~SP--ngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 588 ----GRWLISASMDSTIRTWDLPTG-------------TLIDGLLVDSPCTSLSFSP--NGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred ----CcEEEEeecCCcEEEEeccCc-------------ceeeeEecCCcceeeEECC--CCCEEEEEEecCceEEEEEc
Confidence 899999999999999999877 4444443333221 123 45666666666 67888854
No 222
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.14 E-value=1.7e-09 Score=110.85 Aligned_cols=267 Identities=10% Similarity=0.139 Sum_probs=184.6
Q ss_pred eeCCceEEEEecCCCeEEEEECCCC---cEEEEEec--CCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRS---SVLWEIKL--EGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG---~~~w~~~~--~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~ 627 (900)
++.....||.|...+ |..||..-- ...-.... .+....++-+.+|+..+++|.+-.+|-.||+..-...-+.++
T Consensus 427 IS~~trhVyTgGkgc-VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikael 505 (705)
T KOG0639|consen 427 ISNPTRHVYTGGKGC-VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAEL 505 (705)
T ss_pred ecCCcceeEecCCCe-EEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhc
Confidence 345677899988655 999997521 11111111 233445677888999999999988999999877655433333
Q ss_pred CC--ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 628 CG--EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 628 ~~--~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
.. ..-....+.++.++.|.+..||+|.+||+.+...+..++.+..-.++..+..++-.||.|..|..+.+||+.. |
T Consensus 506 tssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlre--g 583 (705)
T KOG0639|consen 506 TSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLRE--G 583 (705)
T ss_pred CCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhh--h
Confidence 22 2222334556778888899999999999999999988887666667777777778999999999999999998 9
Q ss_pred eeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCCc-eeccccccccCCCeEEEE-eeCCeEEE
Q 002615 706 HTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGGP-IFAGPCTSFALPSQVLIC-SRNGSIYS 783 (900)
Q Consensus 706 ~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~-~~~~~~~~~~~~~~l~~g-~~dg~l~~ 783 (900)
..+.++++...+| +...++.++.+.+|-.++.+.++..+|...+++..... +++.. +..-|.-|+. ..|+-|.+
T Consensus 584 rqlqqhdF~SQIf-SLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlK---Fa~cGkwfvStGkDnlLna 659 (705)
T KOG0639|consen 584 RQLQQHDFSSQIF-SLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLK---FAYCGKWFVSTGKDNLLNA 659 (705)
T ss_pred hhhhhhhhhhhhe-ecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEE---ecccCceeeecCchhhhhh
Confidence 9888888887775 55566788899999999999999866766666554332 33332 2223344443 45677778
Q ss_pred EeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEE
Q 002615 784 FEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILR 838 (900)
Q Consensus 784 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d 838 (900)
|..--|.-+++.+-.+.+.+.-+..+ +.+|+.|+-+.+--+|.
T Consensus 660 wrtPyGasiFqskE~SsVlsCDIS~d------------dkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 660 WRTPYGASIFQSKESSSVLSCDISFD------------DKYIVTGSGDKKATVYE 702 (705)
T ss_pred ccCccccceeeccccCcceeeeeccC------------ceEEEecCCCcceEEEE
Confidence 87766777666555555544333222 77888887776555553
No 223
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.13 E-value=4.8e-09 Score=107.02 Aligned_cols=231 Identities=11% Similarity=0.080 Sum_probs=157.2
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEE---EEEe---------------cCCceeeceeEecCCCEEEEEeeCCEEEEEE
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVL---WEIK---------------LEGRIECSAAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~---w~~~---------------~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
.+.+.++|.++.++.|..|+..+|+.. |... .+.....+.++++|+.++..|..|..+..|+
T Consensus 151 s~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~ 230 (479)
T KOG0299|consen 151 SPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWD 230 (479)
T ss_pred eccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEec
Confidence 345789999999999999999999843 4331 1112234678899999999999999999999
Q ss_pred CCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC-CccccCceeeccCCEEEEEeCCCc
Q 002615 616 YLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG-GSIFGSPAIDEVHDVLYVASTSGR 694 (900)
Q Consensus 616 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~-~~~~~~~~~~~~~~~l~v~t~~g~ 694 (900)
..|++.+..+..+-..+...++-.....+|+++.|..+..|+.+....+-.+..+ ..+.+.-++.. +..+-+|..|..
T Consensus 231 ~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r-eR~vtVGgrDrT 309 (479)
T KOG0299|consen 231 CDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR-ERCVTVGGRDRT 309 (479)
T ss_pred CcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcc-cceEEeccccce
Confidence 9999988877766666666677766778999999999999998764433222222 23333333433 455677778999
Q ss_pred EEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccc----------c
Q 002615 695 LTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGP----------C 763 (900)
Q Consensus 695 l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~----------~ 763 (900)
+..|.+.. .-+.+ +..+...+...++ .++..+++|+.+|.|+.|+ ..-++++......++...+ .
T Consensus 310 ~rlwKi~e-esqli--frg~~~sidcv~~-In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Wits 385 (479)
T KOG0299|consen 310 VRLWKIPE-ESQLI--FRGGEGSIDCVAF-INDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITS 385 (479)
T ss_pred eEEEeccc-cceee--eeCCCCCeeeEEE-ecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceee
Confidence 99998754 11222 2222222233333 4567889999999999999 7778887766544332221 0
Q ss_pred cc-ccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 764 TS-FALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 764 ~~-~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
+. ....+.+..|+.+|.|..|-..+|
T Consensus 386 la~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 386 LAVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred eEecccCceEEecCCCCceEEEEecCC
Confidence 11 123456667788999999888877
No 224
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.12 E-value=3.7e-08 Score=93.63 Aligned_cols=266 Identities=14% Similarity=0.098 Sum_probs=182.2
Q ss_pred CCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 555 DSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
.+++.||..+.|.....|-..+|+.+-.+..+.....++-+..+...++.|+.|..+..||.++|+++.+.+++..++..
T Consensus 20 ~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~ 99 (327)
T KOG0643|consen 20 REGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRV 99 (327)
T ss_pred CCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEE
Confidence 45678888888888888888889999998888776666777777778999999999999999999999888888777765
Q ss_pred eeEeCCCCEEEEecC-----CCeEEEEECC-------CCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 635 PVVDAPRQLIWCGSH-----DHNLYALDFR-------NYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~-----dg~l~~~d~~-------~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
- ++.+++++.+.+. .+.|..+|.. ..++..++.+...-..+....+.+..|+.|..+|.|..||+.+
T Consensus 100 ~-F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~ 178 (327)
T KOG0643|consen 100 D-FSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDART 178 (327)
T ss_pred e-eccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEccc
Confidence 3 4444455554432 3567788776 3456677766655455555566678899999999999999998
Q ss_pred CCceeeeEe-ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCe
Q 002615 703 LPFHTLWLH-ELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGS 780 (900)
Q Consensus 703 ~~g~~~w~~-~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~ 780 (900)
|..+-.. ..+...+....+..+.-+++.++.|..-.++| .+-+.+-++.+..|+-+.. +... .+.+++|. +
T Consensus 179 --g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aa-isP~-~d~VilgG---G 251 (327)
T KOG0643|consen 179 --GKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAA-ISPL-LDHVILGG---G 251 (327)
T ss_pred --CceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeeccccccee-cccc-cceEEecC---C
Confidence 7655433 34444456667777777888899999999999 7777777777777654443 2222 23455442 2
Q ss_pred EEEEeCC-----CCceeeE------------EecC-CceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 781 IYSFEQE-----SGNLLWE------------YSVG-DPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 781 l~~~d~~-----tG~~~w~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
.-+.|.. .|++.-. ++-+ +++.+.++ .+++.....|..||.|++....
T Consensus 252 qeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAf------------hPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 252 QEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAF------------HPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred ceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEE------------CCCCcccccCCCCceEEEEEec
Confidence 3344432 3443211 1111 12222222 2347788889999999887655
No 225
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.11 E-value=2.2e-08 Score=97.37 Aligned_cols=261 Identities=12% Similarity=0.147 Sum_probs=158.7
Q ss_pred EEEEEeeCCEEEEEECCC------CcE------EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeec
Q 002615 601 QVVVGCYKGKIYFLDYLT------GDI------YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLP 668 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~t------G~~------~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~ 668 (900)
.|++|||...|++|++.- -.. +|.++.+.....+.+++ +..+..|+.|.+|..||..+.+.+-..-
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhccee
Confidence 488999999999987432 112 45555555444444443 4778889999999999998755443322
Q ss_pred cCCccccCceeeccC--CEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CC
Q 002615 669 CGGSIFGSPAIDEVH--DVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SS 745 (900)
Q Consensus 669 ~~~~~~~~~~~~~~~--~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~ 745 (900)
.+........+.... ..|+.|+.||.+.+|+... -..+-.++.+..-.....+.+++...+..+.|+.+..|| -+
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~--W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS--WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVR 158 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCC--eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhc
Confidence 222222222222211 3789999999999999776 555555555554455666777888888778899999999 77
Q ss_pred CCEEeeecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeE
Q 002615 746 GSIIWRCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRL 824 (900)
Q Consensus 746 G~~~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (900)
|+.-+..+....... +... .++..+++..++ |-+|..++-++.-+...+..+...++. +++.
T Consensus 159 Gr~a~v~~L~~~at~---v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~~r~l~~~~l-------------~~~~ 221 (362)
T KOG0294|consen 159 GRVAFVLNLKNKATL---VSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENPKRILCATFL-------------DGSE 221 (362)
T ss_pred CccceeeccCCccee---eEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhccccceeeeec-------------CCce
Confidence 876554443322111 1122 233455555444 777766665554444333333333322 2789
Q ss_pred EEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceee----CCEEEEeeeCCeEEEEEcccc
Q 002615 825 VCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI----GGRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 825 l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~----~~~l~vg~~dg~l~~ld~~tg 895 (900)
+.+|.+++.+.++|.+++... ..+.-+..-+-..+.. ..+|...+.||.|..||....
T Consensus 222 L~vG~d~~~i~~~D~ds~~~~-------------~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 222 LLVGGDNEWISLKDTDSDTPL-------------TEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEecCCceEEEeccCCCccc-------------eeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 999999999999998864211 1111111111222222 236777889999999998765
No 226
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.10 E-value=3.9e-09 Score=107.91 Aligned_cols=262 Identities=14% Similarity=0.072 Sum_probs=159.0
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCC-EEEEEECCCCcEEE-EEecCCceeeeeeEeCCCCEE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKG-KIYFLDYLTGDIYW-TFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg-~l~~~d~~tG~~~w-~~~~~~~~~~~~~~~~~~~~i 644 (900)
+.+.+||+.||...|+++.........+-.-...++.++.... .|..|........- .+-.++.+.+. ..++.+..+
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al-~s~n~G~~l 96 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHAL-ASSNLGYFL 96 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeee-ecCCCceEE
Confidence 4688999999999999987632211111111223555554322 35555543322222 22234444433 334445556
Q ss_pred EEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCC-------CceeeeEeecCCcc
Q 002615 645 WCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKAL-------PFHTLWLHELEVPA 717 (900)
Q Consensus 645 ~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~-------~g~~~w~~~~~~~~ 717 (900)
+.|+-.|.||+|...+|+.+..+..+-...+...+.+++..++.|+.||.+..|.+-+. +-+++..+..+.-.
T Consensus 97 ~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Htls 176 (476)
T KOG0646|consen 97 LAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLS 176 (476)
T ss_pred EeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcce
Confidence 66668999999999999988777666555666777777888999999999999874320 11222222222222
Q ss_pred eeeeeeee--CCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc--ee
Q 002615 718 FASLCITS--ANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN--LL 792 (900)
Q Consensus 718 ~~s~~~~~--~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~--~~ 792 (900)
.....+.. .+.++|.++.|..+.+|| ..|.++-++..+..+.+.. ..-.+..+|+|+.+|.++..+..+-. -.
T Consensus 177 ITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~--lDpae~~~yiGt~~G~I~~~~~~~~~~~~~ 254 (476)
T KOG0646|consen 177 ITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVA--LDPAERVVYIGTEEGKIFQNLLFKLSGQSA 254 (476)
T ss_pred eEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEE--EcccccEEEecCCcceEEeeehhcCCcccc
Confidence 22222211 246899999999999999 8898887776655443322 12235689999999999988754322 10
Q ss_pred ----eEE----------ecCC---ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCc
Q 002615 793 ----WEY----------SVGD---PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDV 843 (900)
Q Consensus 793 ----w~~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~ 843 (900)
-.+ .-+. .+....+ ..++..+..|+.||+|.+||..+.+
T Consensus 255 ~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai------------s~DgtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 255 GVNQKGRHEENTQINVLVGHENESAITCLAI------------STDGTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred cccccccccccceeeeeccccCCcceeEEEE------------ecCccEEEeeCCCCCEEEEecchHH
Confidence 000 0000 1111111 2248899999999999999998764
No 227
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.10 E-value=6.9e-09 Score=111.09 Aligned_cols=258 Identities=14% Similarity=0.184 Sum_probs=172.8
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEec--C-CceeeceeEe-cCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKL--E-GRIECSAAVL-ADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~--~-~~~~~~~~~~-~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
.+..+..+|.+|.+..|+...++-+-.... + +-+.++.++. .+++.+++|..|+.+..|...++.+...+..+...
T Consensus 24 ~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~sn 103 (745)
T KOG0301|consen 24 DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSN 103 (745)
T ss_pred CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccc
Confidence 345678888999999999875553322222 2 2233335554 45567999999999999999888888887777776
Q ss_pred eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC-ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 632 KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG-SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~-~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
+|+.... ..+.++.||+|.++..|-. |++......+. .+++...+.. +.++.|+.|..|+.|.- |+.+-.
T Consensus 104 VC~ls~~-~~~~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e--~~~vTgsaDKtIklWk~----~~~l~t 174 (745)
T KOG0301|consen 104 VCSLSIG-EDGTLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPE--NTYVTGSADKTIKLWKG----GTLLKT 174 (745)
T ss_pred eeeeecC-CcCceEecccccceEEecc--hhhhcccCCcchheeeeeecCC--CcEEeccCcceeeeccC----Cchhhh
Confidence 6665444 3466899999999999964 34444443333 3444444443 68888999999999973 455555
Q ss_pred eecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCC-ceeccccccccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 711 HELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGG-PIFAGPCTSFALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~-~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
+..+.......+.. ++..+..++.||.|..++.+|+.+-++.... -+++.. ....++.|+.++.|+++..|+..
T Consensus 175 f~gHtD~VRgL~vl-~~~~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis--~~~~~~~Ivs~gEDrtlriW~~~-- 249 (745)
T KOG0301|consen 175 FSGHTDCVRGLAVL-DDSHFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSIS--MALSDGLIVSTGEDRTLRIWKKD-- 249 (745)
T ss_pred hccchhheeeeEEe-cCCCeEeecCCceEEEEeccCceeeeeeccceEEEEEE--ecCCCCeEEEecCCceEEEeecC--
Confidence 55555544444444 4456788889999999997788776554222 233322 23346678888899999999864
Q ss_pred ceeeEEecCC-ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 790 NLLWEYSVGD-PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 790 ~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
+..-.+.++. .+.+.-+.. ++-|++|+.||.|++|-..
T Consensus 250 e~~q~I~lPttsiWsa~~L~-------------NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLL-------------NGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred ceEEEEecCccceEEEEEee-------------CCCEEEeccCceEEEEEec
Confidence 5555555554 233222221 6778999999999999765
No 228
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=99.08 E-value=6.9e-09 Score=109.13 Aligned_cols=315 Identities=14% Similarity=0.143 Sum_probs=164.1
Q ss_pred cccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEE
Q 002615 546 DASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTF 625 (900)
Q Consensus 546 ~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~ 625 (900)
++.-..+..|..+.+|+|+.+| ++.||..+|+..-.-...........+.+-.+.+|||+++| +|..+.+. |.+
T Consensus 164 d~~V~aLv~D~~g~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~LWVGTdqG-v~~~e~~G----~~~ 237 (671)
T COG3292 164 DTPVVALVFDANGRLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGRLWVGTDQG-VYLQEAEG----WRA 237 (671)
T ss_pred CccceeeeeeccCcEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCcEEEEeccc-eEEEchhh----ccc
Confidence 3333334567889999999999 88899999998754333321112333444456899999887 88877554 443
Q ss_pred ec-----CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEee-cc--CCccccCceeeccCCEEEEEeCCCcEEE
Q 002615 626 QT-----CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKL-PC--GGSIFGSPAIDEVHDVLYVASTSGRLTA 697 (900)
Q Consensus 626 ~~-----~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~-~~--~~~~~~~~~~~~~~~~l~v~t~~g~l~~ 697 (900)
.. +..... ....+..+.+|+|+.+| +..+....+.+.... +. +-+-..+... +..+.+|+++.+| +..
T Consensus 238 sn~~~~lp~~~I~-ll~qD~qG~lWiGTenG-l~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~-D~dGsLWv~t~~g-iv~ 313 (671)
T COG3292 238 SNWGPMLPSGNIL-LLVQDAQGELWIGTENG-LWRTRLPRQGLQIPLSKMHLGVSTVNSLWL-DTDGSLWVGTYGG-IVR 313 (671)
T ss_pred cccCCCCcchhee-eeecccCCCEEEeeccc-ceeEecCCCCccccccccCCccccccceee-ccCCCEeeeccCc-eEE
Confidence 32 222222 33445678899999776 555554444332221 11 1111222333 3468899999877 445
Q ss_pred EEcCCCCceeeeEeecCCcc---eeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeee-cCCCceeccccccccCCCeE
Q 002615 698 ISVKALPFHTLWLHELEVPA---FASLCITSANRHVICCLVDGHVVALD-SSGSIIWRC-RTGGPIFAGPCTSFALPSQV 772 (900)
Q Consensus 698 ~~~~~~~g~~~w~~~~~~~~---~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~-~~~~~~~~~~~~~~~~~~~l 772 (900)
|.... -...-........ +....+......+...+..|.+.+.+ .+|..+... ..-+...+.. ..+.++.+
T Consensus 314 ~~~a~--w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~--~~d~~g~l 389 (671)
T COG3292 314 YLTAD--WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTT--LEDSRGRL 389 (671)
T ss_pred Eecch--hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchh--hhccCCcE
Confidence 54332 1211111111111 01111222244555555556677777 788765332 1111222222 24458899
Q ss_pred EEEeeCCeEEEEeCCC-CceeeEEe-cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccc
Q 002615 773 LICSRNGSIYSFEQES-GNLLWEYS-VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQS 850 (900)
Q Consensus 773 ~~g~~dg~l~~~d~~t-G~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~ 850 (900)
|+|+.+.++..|+.++ +..+-... ...........+ -++.+|+|+.+| |...+++.+. ....
T Consensus 390 Wlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived------------~dnsLWIGTs~G-lvk~~pe~~~---v~n~ 453 (671)
T COG3292 390 WLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVED------------PDNSLWIGTSGG-LVKRDPESGR---VLNL 453 (671)
T ss_pred EEEecccchhhhccCCcccccccccCCcccceeeeeec------------CCCCEEEeccCC-eEecCccccc---hhcc
Confidence 9999997799998776 32221111 011111111111 155699999887 4444544321 0000
Q ss_pred cccceeeeeeeccCCccccCcee-eCCEEEEeeeCCeEEEEEccccc
Q 002615 851 KDHMVQEFAKLELQGDIFSSPVM-IGGRVFVGCRDDYIYCIALETQH 896 (900)
Q Consensus 851 ~~~~~~~~~~~~l~~~~~ss~~~-~~~~l~vg~~dg~l~~ld~~tg~ 896 (900)
-.+....++++.+...-+ .+++||++..+| ++.|+....-
T Consensus 454 -----ln~~~~~l~~s~~~~lg~~~~g~Lw~a~g~g-va~~~sq~~~ 494 (671)
T COG3292 454 -----LNPGSHGLDGSRVEQLGLGPDGRLWLAAGSG-VAAWESQRRM 494 (671)
T ss_pred -----cccccCcCCcchhhhhccCCCCceEEEecce-eeeeccccce
Confidence 001111223333222222 468999998765 6888765443
No 229
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.07 E-value=5.1e-07 Score=94.61 Aligned_cols=267 Identities=12% Similarity=0.082 Sum_probs=168.0
Q ss_pred ceEEEEecCC-----CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee----------CCEEEEEECCCCcE
Q 002615 557 DIYLFVGSHS-----HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY----------KGKIYFLDYLTGDI 621 (900)
Q Consensus 557 ~~~v~igs~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~----------dg~l~~~d~~tG~~ 621 (900)
..++|+-... +.++.+|..+++++-.+..+.+.. ..++++++.+|+.+. +..|-.||.+|++.
T Consensus 12 ~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~--~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~ 89 (352)
T TIGR02658 12 ARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN--PVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP 89 (352)
T ss_pred CCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc--eeECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE
Confidence 4456665543 789999999999998888876653 358999999999876 57899999999999
Q ss_pred EEEEecCCc-------eeeeeeEeCCCCEEEEec-C-CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC
Q 002615 622 YWTFQTCGE-------VKCQPVVDAPRQLIWCGS-H-DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS 692 (900)
Q Consensus 622 ~w~~~~~~~-------~~~~~~~~~~~~~i~~gs-~-dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~ 692 (900)
......+.. ......+++++..+|+.. . +..+..+|..+++.+-.+..++....-+.. +...++-..|
T Consensus 90 ~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~---e~~~~~~~~D 166 (352)
T TIGR02658 90 IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTA---NDTFFMHCRD 166 (352)
T ss_pred EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEec---CCccEEEeec
Confidence 988876543 122345667778899865 3 678999999999999888775532222211 1222233345
Q ss_pred CcEEEEEcCCCCceeeeE-eec----CCcceeeeeeee-CCCEEEEEeecCcEEEEC-CCCC----EEeeecCCC-----
Q 002615 693 GRLTAISVKALPFHTLWL-HEL----EVPAFASLCITS-ANRHVICCLVDGHVVALD-SSGS----IIWRCRTGG----- 756 (900)
Q Consensus 693 g~l~~~~~~~~~g~~~w~-~~~----~~~~~~s~~~~~-~~~~i~~~~~~g~v~~~d-~~G~----~~w~~~~~~----- 756 (900)
|.+..+...+ +|+..-. ... ..+.+..+.+.. ++..+|+... |.|+.+| .... ..|..-..+
T Consensus 167 g~~~~v~~d~-~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~ 244 (352)
T TIGR02658 167 GSLAKVGYGT-KGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADG 244 (352)
T ss_pred CceEEEEecC-CCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccc
Confidence 5555444332 2442211 111 122333343344 4556666654 9999999 3322 234432111
Q ss_pred --ceeccccccccCCCeEEEEee----------CCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCe-
Q 002615 757 --PIFAGPCTSFALPSQVLICSR----------NGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDR- 823 (900)
Q Consensus 757 --~~~~~~~~~~~~~~~l~~g~~----------dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 823 (900)
+.-..+......++.+|+..+ .+.|..+|.++++.+-++.++.......+..+ +.
T Consensus 245 wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~D------------gkp 312 (352)
T TIGR02658 245 WRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQD------------AKP 312 (352)
T ss_pred cCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCC------------CCe
Confidence 000011111224578888542 24799999999999988888776554443332 66
Q ss_pred EEEEEc-CCCcEEEEEeecC
Q 002615 824 LVCICT-SSGSIHILRVNLD 842 (900)
Q Consensus 824 ~l~~g~-~~G~v~~~d~~~~ 842 (900)
++|+.. .++.|.++|..++
T Consensus 313 ~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 313 LLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred EEEEeCCCCCcEEEEECcCC
Confidence 778776 5778999999876
No 230
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.05 E-value=2e-09 Score=108.17 Aligned_cols=265 Identities=11% Similarity=0.030 Sum_probs=178.0
Q ss_pred CceEEEEecCCCeEEEEECCCCcE--EEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSV--LWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
..+++..|..|..|..|+...++. .-..........+.-+..++..+++.++|+.+..||..+++..-++..+..-.+
T Consensus 186 ~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt 265 (459)
T KOG0288|consen 186 NSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVT 265 (459)
T ss_pred CcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhccccccee
Confidence 447788888888899998776552 111111112234566777888899999999999999999988887776655554
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
..-+......++.|++|.++..||+..+.|....-...... ..++. ...++.|-.++.|..||..+ +........
T Consensus 266 ~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cn-DI~~~--~~~~~SgH~DkkvRfwD~Rs--~~~~~sv~~ 340 (459)
T KOG0288|consen 266 AAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCN-DIVCS--ISDVISGHFDKKVRFWDIRS--ADKTRSVPL 340 (459)
T ss_pred eehhhccccceeeccccchhhhhhhhhhheecccccccccc-ceEec--ceeeeecccccceEEEeccC--CceeeEeec
Confidence 44444334448899999999999999877765443322222 12222 24456677899999999887 777777777
Q ss_pred CCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccc---cccccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 714 EVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGP---CTSFALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 714 ~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~---~~~~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
++. ..+..+..++..+.+++.|..+-++| .+-++...++..+...++. ++....+..+..|+.||.||.|+..+|
T Consensus 341 gg~-vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 341 GGR-VTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG 419 (459)
T ss_pred Ccc-eeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc
Confidence 663 46677777788888889999999999 7666766665443322221 122224567888999999999999999
Q ss_pred ceeeEEecCCce--ecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 790 NLLWEYSVGDPI--TASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 790 ~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
++.......... ..+... .+++..+..++.++.+.+|
T Consensus 420 KlE~~l~~s~s~~aI~s~~W-----------~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 420 KLEKVLSLSTSNAAITSLSW-----------NPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred eEEEEeccCCCCcceEEEEE-----------cCCCchhhcccCCcceEec
Confidence 998766544322 111111 1226666666666666555
No 231
>PTZ00420 coronin; Provisional
Probab=99.05 E-value=1.3e-07 Score=105.89 Aligned_cols=223 Identities=9% Similarity=0.028 Sum_probs=138.4
Q ss_pred eCCEEEEEECCCCcEEEEEecCCceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeE--------EEeeccCCccccCc
Q 002615 607 YKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRC--------VYKLPCGGSIFGSP 677 (900)
Q Consensus 607 ~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~--------~w~~~~~~~~~~~~ 677 (900)
..|.+..|+......+..+..+........+.+. +..|++|+.|+.+..||..++.. +..+..+.....+.
T Consensus 52 ~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sV 131 (568)
T PTZ00420 52 LIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII 131 (568)
T ss_pred ceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEE
Confidence 4556777776665566666655544455566654 57889999999999999876421 22222233333444
Q ss_pred eeeccCCEE-EEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC
Q 002615 678 AIDEVHDVL-YVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 678 ~~~~~~~~l-~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~ 755 (900)
...+.+..+ ..++.++.+..||+.+ ++........ ....+..+..++..+.+++.++.+.+|| .+|+.+.++...
T Consensus 132 af~P~g~~iLaSgS~DgtIrIWDl~t--g~~~~~i~~~-~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH 208 (568)
T PTZ00420 132 DWNPMNYYIMCSSGFDSFVNIWDIEN--EKRAFQINMP-KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIH 208 (568)
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCC--CcEEEEEecC-CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecc
Confidence 455544444 5678899999999987 7766666533 3345666667777787788899999999 888887655432
Q ss_pred Cceeccccccc----cCCCeEEEEeeCC----eEEEEeCCC-CceeeEEecCCceec-ccccccccccccccccCCCeEE
Q 002615 756 GPIFAGPCTSF----ALPSQVLICSRNG----SIYSFEQES-GNLLWEYSVGDPITA-SAYIDEHLQLKLESCLSIDRLV 825 (900)
Q Consensus 756 ~~~~~~~~~~~----~~~~~l~~g~~dg----~l~~~d~~t-G~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 825 (900)
.......++.. ..++.|+.++.++ .|..||..+ ++.+-....+..... .++.+. ..+.++
T Consensus 209 ~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~----------~tg~l~ 278 (568)
T PTZ00420 209 DGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDE----------STGLIY 278 (568)
T ss_pred cCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeC----------CCCCEE
Confidence 21111111111 2334566666553 799999885 555544443332211 233322 125667
Q ss_pred EEEcCCCcEEEEEeecC
Q 002615 826 CICTSSGSIHILRVNLD 842 (900)
Q Consensus 826 ~~g~~~G~v~~~d~~~~ 842 (900)
.+|..|+.|++|+...+
T Consensus 279 lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 279 LIGKGDGNCRYYQHSLG 295 (568)
T ss_pred EEEECCCeEEEEEccCC
Confidence 78889999999998755
No 232
>PTZ00421 coronin; Provisional
Probab=99.04 E-value=6.3e-08 Score=107.83 Aligned_cols=195 Identities=9% Similarity=0.036 Sum_probs=131.8
Q ss_pred CceEEEEecCCCeEEEEECCCCc-------EEEEEecCCceeeceeEecCC-CEEEEEeeCCEEEEEECCCCcEEEEEec
Q 002615 556 SDIYLFVGSHSHKFICADAKRSS-------VLWEIKLEGRIECSAAVLADF-SQVVVGCYKGKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~-------~~w~~~~~~~~~~~~~~~~~~-~~i~vg~~dg~l~~~d~~tG~~~w~~~~ 627 (900)
++..++.|+.|+.|..||..++. .+..+..+........+.+++ +.+++|+.|+.|..||..+++..-.+..
T Consensus 87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~ 166 (493)
T PTZ00421 87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC 166 (493)
T ss_pred CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC
Confidence 45688999999999999987653 233344444334456677654 5788899999999999999988777665
Q ss_pred CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc-cccCceeeccCCEEEEEe----CCCcEEEEEcCC
Q 002615 628 CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS-IFGSPAIDEVHDVLYVAS----TSGRLTAISVKA 702 (900)
Q Consensus 628 ~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~-~~~~~~~~~~~~~l~v~t----~~g~l~~~~~~~ 702 (900)
+........+.+++..+++++.|+.|..||+.+++.+.....+.. ...........+.++.+. .++.+..||+.+
T Consensus 167 h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 167 HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 555455556777778899999999999999999998877655432 222233333345555432 368899999875
Q ss_pred CCceeeeEeecCC-cceeeeeeeeCCCEEEEEee-cCcEEEEC-CCCCEEee
Q 002615 703 LPFHTLWLHELEV-PAFASLCITSANRHVICCLV-DGHVVALD-SSGSIIWR 751 (900)
Q Consensus 703 ~~g~~~w~~~~~~-~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~~G~~~w~ 751 (900)
. .+.+....... .....+.+..+++.+++++. |+.|.+|| .+++++..
T Consensus 247 ~-~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~ 297 (493)
T PTZ00421 247 M-ASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFC 297 (493)
T ss_pred C-CCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEE
Confidence 1 12332222221 12223334556778888874 89999999 88877644
No 233
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.04 E-value=8.3e-08 Score=95.79 Aligned_cols=268 Identities=15% Similarity=0.081 Sum_probs=161.5
Q ss_pred CCEEEEEeeCCEEEEEECCCCcEEEEEecCCc-eeeeeeEe--CCCCEEEEecCCCeEEEEECCCCeEEEee----ccCC
Q 002615 599 FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGE-VKCQPVVD--APRQLIWCGSHDHNLYALDFRNYRCVYKL----PCGG 671 (900)
Q Consensus 599 ~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~--~~~~~i~~gs~dg~l~~~d~~~g~~~w~~----~~~~ 671 (900)
.+.|+.|||||.+..|| ..|+...++..+.. ++...-+. +....+++++.|.++..|-.+.++..-+. ..+.
T Consensus 115 ~~~IltgsYDg~~riWd-~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk 193 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWD-LKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHK 193 (423)
T ss_pred CceEEEeecCCeeEEEe-cCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccc
Confidence 56899999999999999 67888877766543 33222222 22346888999998877765555432211 1122
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCC---ce--------------------eeeEeecCCcceeeeeeeeCCC
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALP---FH--------------------TLWLHELEVPAFASLCITSANR 728 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~---g~--------------------~~w~~~~~~~~~~s~~~~~~~~ 728 (900)
...-+.....++.++..|+.|..|-.|+..+.. ++ ++-....+....++. ...+.+
T Consensus 194 ~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V-~w~d~~ 272 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV-VWSDAT 272 (423)
T ss_pred cceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE-EEcCCC
Confidence 333344445556788889999999999822110 10 111111112222333 334578
Q ss_pred EEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc--ee-eEEecCCceecc
Q 002615 729 HVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN--LL-WEYSVGDPITAS 804 (900)
Q Consensus 729 ~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~--~~-w~~~~~~~~~~~ 804 (900)
.+|.++.|-+|..+| .+|..+-+...+..+.+..... ....|..|+.|..+..||+.+|. .. .++.-+.+.+++
T Consensus 273 v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~--~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVss 350 (423)
T KOG0313|consen 273 VIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSP--LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSS 350 (423)
T ss_pred ceEeecccceEEEEEeecccceeeeecCcceeEeeccc--ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhh
Confidence 899999999999999 8888877766665554433211 34578888999999999998864 22 233333332222
Q ss_pred cccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeC-CEEEEeee
Q 002615 805 AYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIG-GRVFVGCR 883 (900)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~-~~l~vg~~ 883 (900)
.-. ...+...++.++.||.+.+||.++-... +....-+++-+-+.-..+ ..|..|+.
T Consensus 351 vkw----------sp~~~~~~~S~S~D~t~klWDvRS~k~p------------lydI~~h~DKvl~vdW~~~~~IvSGGa 408 (423)
T KOG0313|consen 351 VKW----------SPTNEFQLVSGSYDNTVKLWDVRSTKAP------------LYDIAGHNDKVLSVDWNEGGLIVSGGA 408 (423)
T ss_pred eec----------CCCCceEEEEEecCCeEEEEEeccCCCc------------ceeeccCCceEEEEeccCCceEEeccC
Confidence 111 1223677889999999999999854210 111111122222222223 47777888
Q ss_pred CCeEEEEEc
Q 002615 884 DDYIYCIAL 892 (900)
Q Consensus 884 dg~l~~ld~ 892 (900)
|+.|+++.-
T Consensus 409 D~~l~i~~~ 417 (423)
T KOG0313|consen 409 DNKLRIFKG 417 (423)
T ss_pred cceEEEecc
Confidence 999988753
No 234
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.01 E-value=4.5e-08 Score=94.78 Aligned_cols=237 Identities=9% Similarity=0.077 Sum_probs=150.5
Q ss_pred eceeEec-CCCEEEEEeeCCEEEEEECCC-CcEEEE--EecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEe
Q 002615 591 CSAAVLA-DFSQVVVGCYKGKIYFLDYLT-GDIYWT--FQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYK 666 (900)
Q Consensus 591 ~~~~~~~-~~~~i~vg~~dg~l~~~d~~t-G~~~w~--~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~ 666 (900)
+...+++ ....+.+|++||+|.+|+.++ |...-+ ....+.+.+ ..+.+++..+++|+-|+.+..||+.+++....
T Consensus 31 S~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~-v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v 109 (347)
T KOG0647|consen 31 SALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLD-VCWSDDGSKVFSGGCDKQAKLWDLASGQVSQV 109 (347)
T ss_pred heeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEE-EEEccCCceEEeeccCCceEEEEccCCCeeee
Confidence 3445666 445666999999999999876 554322 223344443 45677788999999999999999999977655
Q ss_pred eccCCccccCceeecc-CCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C
Q 002615 667 LPCGGSIFGSPAIDEV-HDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S 744 (900)
Q Consensus 667 ~~~~~~~~~~~~~~~~-~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~ 744 (900)
-...+++...-.+..- -..|..|++|..|.-||.+. -.++-+..++...+.. ......+++++.+..|.+|+ .
T Consensus 110 ~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~--~~pv~t~~LPeRvYa~---Dv~~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 110 AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS--SNPVATLQLPERVYAA---DVLYPMAVVATAERHIAVYNLE 184 (347)
T ss_pred eecccceeEEEEecCCCcceeEecccccceeecccCC--CCeeeeeeccceeeeh---hccCceeEEEecCCcEEEEEcC
Confidence 5445555444444331 13578899999999999886 6777777777655432 23356788899999999999 6
Q ss_pred CCCEEeeecCCCceeccccccc-cCCCeEEEEeeCCeEEEEeCCCC--ceeeEEecCCc-------eecccccccccccc
Q 002615 745 SGSIIWRCRTGGPIFAGPCTSF-ALPSQVLICSRNGSIYSFEQESG--NLLWEYSVGDP-------ITASAYIDEHLQLK 814 (900)
Q Consensus 745 ~G~~~w~~~~~~~~~~~~~~~~-~~~~~l~~g~~dg~l~~~d~~tG--~~~w~~~~~~~-------~~~~~~~~~~~~~~ 814 (900)
++....+.....--+..-|+.. ...+...+|+..|.+.....+.+ +....++.+-. +|+.- +
T Consensus 185 n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVN----s---- 256 (347)
T KOG0647|consen 185 NPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVN----S---- 256 (347)
T ss_pred CCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEec----c----
Confidence 6654332211111111222221 12233478889998888777766 33344443321 22211 1
Q ss_pred cccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 815 LESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 815 ~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
....+.-+.+..++.||.+..||.+..
T Consensus 257 -i~FhP~hgtlvTaGsDGtf~FWDkdar 283 (347)
T KOG0647|consen 257 -IAFHPVHGTLVTAGSDGTFSFWDKDAR 283 (347)
T ss_pred -eEeecccceEEEecCCceEEEecchhh
Confidence 111223567788888999999998755
No 235
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.00 E-value=9.7e-09 Score=109.10 Aligned_cols=267 Identities=13% Similarity=0.158 Sum_probs=166.5
Q ss_pred ceEEEEecCCCeEEEEECCCCcEE------EEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEE---Eec
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVL------WEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWT---FQT 627 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~------w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~---~~~ 627 (900)
+.++|.|+.||.|..|+.....-. -++..+.....-.+...++..++..+.|-+|..|+...+- .|- +..
T Consensus 37 ~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~~c~stir~ 115 (735)
T KOG0308|consen 37 GRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-TFCMSTIRT 115 (735)
T ss_pred CceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-chhHhhhhc
Confidence 457999999999999985432211 1111222222233444556678888889999999987764 332 223
Q ss_pred C-CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe--EEEeecc------C-Ccccc--CceeeccCCEEEEEeCCCcE
Q 002615 628 C-GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR--CVYKLPC------G-GSIFG--SPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 628 ~-~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~--~~w~~~~------~-~~~~~--~~~~~~~~~~l~v~t~~g~l 695 (900)
+ +.+++......+...+..|+-|+.|+.||..+|. .+-.++. + |+..+ +.+..+.+-.+..|+.++.|
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~l 195 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDL 195 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccce
Confidence 3 3444444436666778889999999999999883 3322221 1 22111 12222222245567778999
Q ss_pred EEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-eeccccccccCCCeEE
Q 002615 696 TAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-IFAGPCTSFALPSQVL 773 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-~~~~~~~~~~~~~~l~ 773 (900)
..||+.+ ++.+-+...+....-...+..++.+++.++.||.|..|| ...+.+.++..... +.+..+- ..-..+|
T Consensus 196 r~wDprt--~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~--~sf~~vY 271 (735)
T KOG0308|consen 196 RLWDPRT--CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSS--PSFTHVY 271 (735)
T ss_pred EEecccc--ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeC--CCcceEE
Confidence 9999998 887777777666666666777788999999999999999 55555555443322 3322211 1224799
Q ss_pred EEeeCCeEEEEeCCCC-ceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 774 ICSRNGSIYSFEQESG-NLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 774 ~g~~dg~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
.|+.||.|++=|..+- +..-..+-..++...... ..++-+|+++.++.|..|...
T Consensus 272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~------------~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLH------------EHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred ecCCCCcEEecccCCchhheEeecCCCchhhhhhc------------cccCCceeeeccccceecCCc
Confidence 9999999999988763 222222222232211111 114566999999999998554
No 236
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.98 E-value=7.1e-08 Score=102.57 Aligned_cols=95 Identities=18% Similarity=0.249 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCc----------eeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee------eeeeE-
Q 002615 575 KRSSVLWEIKLEGR----------IECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK------CQPVV- 637 (900)
Q Consensus 575 ~tG~~~w~~~~~~~----------~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~------~~~~~- 637 (900)
.+-++.|++..++- .+.++.... +.+|+.+..+.++++|+.||+.+|+++...... ++-.+
T Consensus 182 ~nL~~AWty~TGD~k~~~d~~e~t~e~tPLkvg--dtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCrgVs 259 (773)
T COG4993 182 GNLQVAWTYRTGDVKQPEDPGETTNEVTPLKVG--DTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCRGVS 259 (773)
T ss_pred hccceeEEEecCcccCCCCcccccccccceEEC--CEEEEecCcceeEEeeccCCceeeecCCCCCCCccccccccccee
Confidence 34566777765531 233555544 489999999999999999999999987532110 01011
Q ss_pred ---------eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 638 ---------DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 638 ---------~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
.+....||..+.|..|.++|.++|++.|.+..++
T Consensus 260 y~~a~a~~k~pc~~rIflpt~DarlIALdA~tGkvc~~Fa~~G 302 (773)
T COG4993 260 YGAAKADAKSPCPRRIFLPTADARLIALDADTGKVCWSFANKG 302 (773)
T ss_pred cccccccccCCCceeEEeecCCceEEEEeCCCCcEeheeccCc
Confidence 1123569999999999999999999999987654
No 237
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.98 E-value=4.6e-07 Score=98.24 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=109.3
Q ss_pred CCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 555 DSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
++.-.+.+|-.||.|..||..++...-.+..+.+..+..-++..|..+..|+.|+.|..||.-.-.-+.++..+......
T Consensus 75 ~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~ 154 (888)
T KOG0306|consen 75 DDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQ 154 (888)
T ss_pred CCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhH
Confidence 34456789999999999999998888788778776666678888899999999999999998665566666665555555
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEc
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISV 700 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~ 700 (900)
..+..++..++..+.|+.+..||+++..|....-.+..-....++.+ ..++.++.++.+..|++
T Consensus 155 ~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L 218 (888)
T KOG0306|consen 155 ALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWEL 218 (888)
T ss_pred HhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecCCceEEEEe
Confidence 55555567788889999999999999988766544444444445554 66777777777777776
No 238
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.93 E-value=8.7e-08 Score=102.05 Aligned_cols=279 Identities=16% Similarity=0.171 Sum_probs=171.7
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEE---EecCCceeeceeE-ecCCCEEEEEeeCCEEEEEECCCCc--EEEEEec---
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWE---IKLEGRIECSAAV-LADFSQVVVGCYKGKIYFLDYLTGD--IYWTFQT--- 627 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~---~~~~~~~~~~~~~-~~~~~~i~vg~~dg~l~~~d~~tG~--~~w~~~~--- 627 (900)
+..++..|+|-+|..|++..+. .|. +..+.....+..+ ..+...+..|+.|+.|+.||..+|. ..-++..
T Consensus 85 ~~tlIS~SsDtTVK~W~~~~~~-~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 85 GKTLISASSDTTVKVWNAHKDN-TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred CCceEEecCCceEEEeecccCc-chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 4477888999999999988775 343 2233332223333 5666678889999999999999883 3333221
Q ss_pred ---C-C--ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcC
Q 002615 628 ---C-G--EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 628 ---~-~--~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
. + ..+.+.+..+.+-.|+.|+.++-|..||+++++.+-+...+....-...+.+++.+++.++.||.|..||+.
T Consensus 164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence 1 1 111222223333356667888999999999998887777655555566677778899999999999999987
Q ss_pred CCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCC-CEEeeecCCCceeccccccccCCCeEEEEeeCC
Q 002615 702 ALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSG-SIIWRCRTGGPIFAGPCTSFALPSQVLICSRNG 779 (900)
Q Consensus 702 ~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G-~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 779 (900)
. -..+.++..+....-+....++-..+|.|+.+|.|++-| .+- +..--++...|+.... ....++.+|+++.|+
T Consensus 244 q--QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~--~~~~~~~~WvtTtds 319 (735)
T KOG0308|consen 244 Q--QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLH--LHEHDNSVWVTTTDS 319 (735)
T ss_pred c--cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhh--hccccCCceeeeccc
Confidence 6 556666666655443444445567899999999999988 542 2222233344433221 122346679999999
Q ss_pred eEEEEeCCC-------CceeeEEecC--Cceec---cccc--ccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 780 SIYSFEQES-------GNLLWEYSVG--DPITA---SAYI--DEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 780 ~l~~~d~~t-------G~~~w~~~~~--~~~~~---~~~~--~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
.|.+|-..- |.. |..... .+... +|.. .....+.-.+...+.+.+..-...|.+..||.-.
T Consensus 320 ~I~rW~~~~~~~l~~s~~~-~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~ 394 (735)
T KOG0308|consen 320 SIKRWKLEPDIALSVSGDL-DFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILA 394 (735)
T ss_pred cceecCCccccccccCCCC-CcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeee
Confidence 999886421 111 111111 11111 1110 1111111112234467888888899999999854
No 239
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.92 E-value=1.4e-07 Score=96.51 Aligned_cols=184 Identities=15% Similarity=0.100 Sum_probs=129.3
Q ss_pred ceEEEEecCCCe--EEEEECCCCcEEEEEecCCceeeceeEecCCC-EEEEEeeCCEEEEEECCCCcEEEEEecCC---c
Q 002615 557 DIYLFVGSHSHK--FICADAKRSSVLWEIKLEGRIECSAAVLADFS-QVVVGCYKGKIYFLDYLTGDIYWTFQTCG---E 630 (900)
Q Consensus 557 ~~~v~igs~~g~--l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~-~i~vg~~dg~l~~~d~~tG~~~w~~~~~~---~ 630 (900)
...+.++..++. ||.+|.++...+-...+......++++.++|. .|++++....+|.||+.++++.......+ .
T Consensus 225 ~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~ 304 (514)
T KOG2055|consen 225 APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEK 304 (514)
T ss_pred CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccc
Confidence 344567777774 56667666666666666665556788888887 78888888899999999988754322211 1
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
..-.--++.++..|.+.+..|+|+.+..+|++.+-.++..|.+.... +..++..||+.+.+|.++.||++. -+.+.+
T Consensus 305 ~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~-fsSdsk~l~~~~~~GeV~v~nl~~--~~~~~r 381 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFT-FSSDSKELLASGGTGEVYVWNLRQ--NSCLHR 381 (514)
T ss_pred hhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEE-EecCCcEEEEEcCCceEEEEecCC--cceEEE
Confidence 11111234456788888899999999999999988888877654443 334467889888899999999998 344444
Q ss_pred eecCCcce-eeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 711 HELEVPAF-ASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 711 ~~~~~~~~-~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
....+.+. .+.+++..+.++.+|+..|-|.+||
T Consensus 382 f~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 382 FVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred EeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence 43333322 4555666777888899899999998
No 240
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=98.91 E-value=2.9e-08 Score=104.58 Aligned_cols=267 Identities=13% Similarity=0.146 Sum_probs=149.1
Q ss_pred eeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc
Q 002615 593 AAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS 672 (900)
Q Consensus 593 ~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~ 672 (900)
+.+.+-.+.+|+|+.+| |+.||..+|+.+-.-...-....-..+.+-.+.+|+|+++| ++..+.+. |.+..-+.
T Consensus 169 aLv~D~~g~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~LWVGTdqG-v~~~e~~G----~~~sn~~~ 242 (671)
T COG3292 169 ALVFDANGRLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGRLWVGTDQG-VYLQEAEG----WRASNWGP 242 (671)
T ss_pred eeeeeccCcEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCcEEEEeccc-eEEEchhh----ccccccCC
Confidence 44445556899999888 99999999988754332221112222333467899999776 88877665 55544332
Q ss_pred c-----ccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceee-ee-eeeCCCEEEEEeecCcEEEECCC
Q 002615 673 I-----FGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFAS-LC-ITSANRHVICCLVDGHVVALDSS 745 (900)
Q Consensus 673 ~-----~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s-~~-~~~~~~~i~~~~~~g~v~~~d~~ 745 (900)
. .... ..+..+.+|+||.+| +.++.... .+-..-..+.+.+ ++. .. ....++.+|+++.+|.+...+..
T Consensus 243 ~lp~~~I~ll-~qD~qG~lWiGTenG-l~r~~l~r-q~Lq~~~~~~~l~-~S~vnsL~~D~dGsLWv~t~~giv~~~~a~ 318 (671)
T COG3292 243 MLPSGNILLL-VQDAQGELWIGTENG-LWRTRLPR-QGLQIPLSKMHLG-VSTVNSLWLDTDGSLWVGTYGGIVRYLTAD 318 (671)
T ss_pred CCcchheeee-ecccCCCEEEeeccc-ceeEecCC-CCccccccccCCc-cccccceeeccCCCEeeeccCceEEEecch
Confidence 2 2222 233468899999988 44444433 0211111222222 222 12 23457889999876654443333
Q ss_pred CCEEeeecCC-Cce-eccccccccCCCeEEEEeeCCeEEEEeCCCCceeeE-EecCCceecccccccccccccccccCCC
Q 002615 746 GSIIWRCRTG-GPI-FAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWE-YSVGDPITASAYIDEHLQLKLESCLSID 822 (900)
Q Consensus 746 G~~~w~~~~~-~~~-~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (900)
-...-.+... +.+ -.........+..++..+..|.+.+.+..+|..+-. +.......++...++ +
T Consensus 319 w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~------------~ 386 (671)
T COG3292 319 WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDS------------R 386 (671)
T ss_pred hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhcc------------C
Confidence 2221112211 111 111111123356678887788889999999987543 333333333333333 8
Q ss_pred eEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee-----eCCEEEEeeeCCeEEEEEcccccc
Q 002615 823 RLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM-----IGGRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 823 ~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~-----~~~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
+.+|+|+...++-.|+.++ .+..+.......++++. -++.+|+|+.+| +...+++.++.
T Consensus 387 g~lWlgs~q~GLsrl~n~n---------------~~avlde~agl~ss~V~aived~dnsLWIGTs~G-lvk~~pe~~~v 450 (671)
T COG3292 387 GRLWLGSMQNGLSRLDNKN---------------EWAVLDEDAGLPSSEVSAIVEDPDNSLWIGTSGG-LVKRDPESGRV 450 (671)
T ss_pred CcEEEEecccchhhhccCC---------------cccccccccCCcccceeeeeecCCCCEEEeccCC-eEecCccccch
Confidence 8999999987787776653 23333333334444432 246799999876 66666666554
No 241
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=1.6e-07 Score=100.72 Aligned_cols=267 Identities=12% Similarity=-0.000 Sum_probs=169.3
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec-CCceeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT-CGEVKCQP 635 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~-~~~~~~~~ 635 (900)
.+.|.+|... .||+|+..+|++.-....+....++...+.+|..|.+|+.+|.++.||.++.+..-.+.. +..-..+.
T Consensus 188 ~n~laValg~-~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~l 266 (484)
T KOG0305|consen 188 ANVLAVALGQ-SVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSL 266 (484)
T ss_pred CCeEEEEecc-eEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEE
Confidence 4566776644 599999999998776666544556888899999999999999999999887766655555 33333333
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEe-eccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYK-LPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~-~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
.. ....+-+|+.++.+..+|....+..-. ...+..-........++..+..|..|+.+..||... -.++.++..+
T Consensus 267 aW--~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~--~~p~~~~~~H 342 (484)
T KOG0305|consen 267 AW--NSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS--PEPKFTFTEH 342 (484)
T ss_pred ec--cCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC--ccccEEEecc
Confidence 33 346788899999999999876554333 222222233333444456777788899999999743 3444455444
Q ss_pred CcceeeeeeeeC-CCEEEEE--eecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEE--eeCCeEEEEeCCC
Q 002615 715 VPAFASLCITSA-NRHVICC--LVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLIC--SRNGSIYSFEQES 788 (900)
Q Consensus 715 ~~~~~s~~~~~~-~~~i~~~--~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g--~~dg~l~~~d~~t 788 (900)
....-....++- .+.+.+| +.|+.|..+| .+|+.+-...++..+-+..... ..+.+..+ ..++.|..|+..+
T Consensus 343 ~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk--~~kEi~sthG~s~n~i~lw~~ps 420 (484)
T KOG0305|consen 343 TAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSK--KYKELLSTHGYSENQITLWKYPS 420 (484)
T ss_pred ceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcC--CCCEEEEecCCCCCcEEEEeccc
Confidence 444444444443 3455554 4588899999 8888877777666654432111 12234433 3345566666555
Q ss_pred CceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 789 GNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 789 G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
-+.+-.+..+...+.... ..+++..|++|+.|.++.+|+.-+
T Consensus 421 ~~~~~~l~gH~~RVl~la-----------~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 421 MKLVAELLGHTSRVLYLA-----------LSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred cceeeeecCCcceeEEEE-----------ECCCCCEEEEecccCcEEeccccC
Confidence 444333333322222111 223488999999999999997753
No 242
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=98.90 E-value=2.7e-07 Score=89.82 Aligned_cols=194 Identities=11% Similarity=0.059 Sum_probs=128.8
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
.+..++..|.++.+||.||.+..||..|-.+-..+..+-...++..++.++..++++|.|..+..||...|.++.++...
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~ 106 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFD 106 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEcc
Confidence 36678899999999999999999999887765555556566778888888999999999999999999999999999888
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeee---eeeeCCCEEEEEeecCcEEEEC-CCC
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASL---CITSANRHVICCLVDGHVVALD-SSG 746 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~---~~~~~~~~i~~~~~~g~v~~~d-~~G 746 (900)
.+++.......+.+..++.-.+..-+.++..+..-+.+-. +.....-.+. .....++++++|+..|.+.+++ .+-
T Consensus 107 spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~-d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~ 185 (405)
T KOG1273|consen 107 SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPK-DDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL 185 (405)
T ss_pred CccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccC-CCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence 8877766555533443333333333444433311111111 1111111111 2455688999999999999999 776
Q ss_pred CEEeeecCCC--ceeccccccccCCCeEEEEeeCCeEEEEeCC
Q 002615 747 SIIWRCRTGG--PIFAGPCTSFALPSQVLICSRNGSIYSFEQE 787 (900)
Q Consensus 747 ~~~w~~~~~~--~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~ 787 (900)
+.+..++... .+-.. .....+..+.+-+.|..+..|+.+
T Consensus 186 e~vas~rits~~~IK~I--~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 186 ECVASFRITSVQAIKQI--IVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred eeeeeeeechheeeeEE--EEeccCcEEEEecCCceEEEEehh
Confidence 7664443221 11111 112235567788888888888764
No 243
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=98.90 E-value=5e-07 Score=88.05 Aligned_cols=238 Identities=14% Similarity=0.127 Sum_probs=148.4
Q ss_pred CCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 555 DSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
.-+..+.+|..+|.|..||..|-.+-..+..+-+..++.+.+.+|..++..+.|..+..||...|.++.++....++...
T Consensus 33 ~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~ 112 (405)
T KOG1273|consen 33 RWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGA 112 (405)
T ss_pred cCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCcccee
Confidence 35778999999999999999987766566667777789999999999999999999999999999999988888777655
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCC--eEEEeeccCCccccCc---eeeccCCEEEEEeCCCcEEEEEcCCCCceeee
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNY--RCVYKLPCGGSIFGSP---AIDEVHDVLYVASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g--~~~w~~~~~~~~~~~~---~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w 709 (900)
.....+.+..++.-.+..-+.++..++ .++- .+..+....++ .++..+..||+||..|.+..|+..+ -+.+-
T Consensus 113 q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp-~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t--~e~va 189 (405)
T KOG1273|consen 113 QWHPRKRNKCVATIMEESPVVIDFSDPKHSVLP-KDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET--LECVA 189 (405)
T ss_pred eeccccCCeEEEEEecCCcEEEEecCCceeecc-CCCccccccccccccccCCCCEEEEecCcceEEEEecch--heeee
Confidence 433333344444333333333333322 1211 11223222222 3666778999999999999999887 56554
Q ss_pred EeecCC-cceeeeeeeeCCCEEEEEeecCcEEEEC-C-------CCCEE--eeecC--CCceeccccccccCCCeEEEEe
Q 002615 710 LHELEV-PAFASLCITSANRHVICCLVDGHVVALD-S-------SGSII--WRCRT--GGPIFAGPCTSFALPSQVLICS 776 (900)
Q Consensus 710 ~~~~~~-~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-------~G~~~--w~~~~--~~~~~~~~~~~~~~~~~l~~g~ 776 (900)
.+.... ...-...+...+..+.+-+.|..|..|+ + .|++- .++.. +.......|. ...+..++.++
T Consensus 190 s~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccf-s~dgeYv~a~s 268 (405)
T KOG1273|consen 190 SFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCF-SGDGEYVCAGS 268 (405)
T ss_pred eeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheee-cCCccEEEecc
Confidence 443332 2223334444566677777777777765 2 11111 11110 0001111121 22334455554
Q ss_pred e-CCeEEEEeCCCCceeeEEe
Q 002615 777 R-NGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 777 ~-dg~l~~~d~~tG~~~w~~~ 796 (900)
. -..+|.|....|.++-.+.
T Consensus 269 ~~aHaLYIWE~~~GsLVKILh 289 (405)
T KOG1273|consen 269 ARAHALYIWEKSIGSLVKILH 289 (405)
T ss_pred ccceeEEEEecCCcceeeeec
Confidence 3 4579999999998876543
No 244
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.89 E-value=1.5e-07 Score=103.56 Aligned_cols=237 Identities=11% Similarity=0.117 Sum_probs=164.7
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
+..+.+....|.++-.+|.|..||-+-|.++-+|.-++..+-...+.+....++.|++|..|.+|+.++.+|+.+...+-
T Consensus 14 glsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHl 93 (1202)
T KOG0292|consen 14 GLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHL 93 (1202)
T ss_pred ceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcccc
Confidence 45677777789999899999999999999988888776655556777777777888999999999999999988766554
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEee
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWR 751 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~ 751 (900)
.......+...--.|+.++.|.+|..||-.+ ++.+-....+........+.+..+.|+.++-|.+|.+||-+|-..-.
T Consensus 94 DYVRt~~FHheyPWIlSASDDQTIrIWNwqs--r~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~ 171 (1202)
T KOG0292|consen 94 DYVRTVFFHHEYPWILSASDDQTIRIWNWQS--RKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKN 171 (1202)
T ss_pred ceeEEeeccCCCceEEEccCCCeEEEEeccC--CceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccC
Confidence 5555555554345678889999999999887 77776665555544555566778899999999999999944432211
Q ss_pred ecCC------------Cceeccc-c-cccc---------------CCCeEEEEeeCCeEEEEeCCCCceeeEEecCC---
Q 002615 752 CRTG------------GPIFAGP-C-TSFA---------------LPSQVLICSRNGSIYSFEQESGNLLWEYSVGD--- 799 (900)
Q Consensus 752 ~~~~------------~~~~~~~-~-~~~~---------------~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~--- 799 (900)
...+ ...+..+ + +... .-..|+.|+.|..|.+|.. +....|+.+.--
T Consensus 172 ~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrm-netKaWEvDtcrgH~ 250 (1202)
T KOG0292|consen 172 KAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM-NETKAWEVDTCRGHY 250 (1202)
T ss_pred CCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEe-ccccceeehhhhccc
Confidence 1111 1112111 1 1000 0124667777888888874 456678776422
Q ss_pred ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 800 PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
+.+++..+.. ..++|...++|+.|++||.+..
T Consensus 251 nnVssvlfhp-----------~q~lIlSnsEDksirVwDm~kR 282 (1202)
T KOG0292|consen 251 NNVSSVLFHP-----------HQDLILSNSEDKSIRVWDMTKR 282 (1202)
T ss_pred CCcceEEecC-----------ccceeEecCCCccEEEEecccc
Confidence 2333333332 2689999999999999999866
No 245
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.88 E-value=5.9e-08 Score=106.02 Aligned_cols=216 Identities=9% Similarity=0.008 Sum_probs=158.6
Q ss_pred EEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEec
Q 002615 569 FICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGS 648 (900)
Q Consensus 569 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs 648 (900)
+...|..++...-+.-.+.....+..++++..+++.++.|+.+..|...|-..+-.+..+...+....+.+.+-++.+++
T Consensus 433 ~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas 512 (707)
T KOG0263|consen 433 VDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATAS 512 (707)
T ss_pred hhhccccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecC
Confidence 44455555544444444444444678889988999999999999999988777666776655555555666666677789
Q ss_pred CCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCC
Q 002615 649 HDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANR 728 (900)
Q Consensus 649 ~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~ 728 (900)
+|++...|....-+++..+..+-+-..+..+.++...+..|+.+.++..||..+ |..+-.+..+.....+..+++.+.
T Consensus 513 ~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~--G~~VRiF~GH~~~V~al~~Sp~Gr 590 (707)
T KOG0263|consen 513 HDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST--GNSVRIFTGHKGPVTALAFSPCGR 590 (707)
T ss_pred CCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCC--CcEEEEecCCCCceEEEEEcCCCc
Confidence 999998888777677766665555555566777778888899999999999998 888777777777778888888889
Q ss_pred EEEEEeecCcEEEEC-CCCCEEeeecCC-CceeccccccccCCCeEEEEeeCCeEEEEeCCC
Q 002615 729 HVICCLVDGHVVALD-SSGSIIWRCRTG-GPIFAGPCTSFALPSQVLICSRNGSIYSFEQES 788 (900)
Q Consensus 729 ~i~~~~~~g~v~~~d-~~G~~~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t 788 (900)
++..|+.+|.|..|| .+|+++-++... +.+.+.. + ...++.+.+|+.|..|..||...
T Consensus 591 ~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~Sls-F-S~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 591 YLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLS-F-SRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred eEeecccCCcEEEEEcCCCcchhhhhcccCceeEEE-E-ecCCCEEEecCCCCeEEEEEchh
Confidence 999999999999999 888887555433 2232222 1 22345677778899999998753
No 246
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.86 E-value=5.3e-08 Score=106.35 Aligned_cols=188 Identities=10% Similarity=-0.068 Sum_probs=152.1
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
..++.+|...|.|+.+..|.+.|-..+=.++.+......+.+++.|-+...++.|++-..|....-+.+-.+..+-.-..
T Consensus 460 sPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~ 539 (707)
T KOG0263|consen 460 SPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVD 539 (707)
T ss_pred cccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccc
Confidence 34678888899999999999998777666766655445566777776677788888888887766666655554433344
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
+..+.++..++.+||.|.++..||..+|..+..+..+.....+.++++.+..|..|+.+|.|..||+.+ |+++-+...
T Consensus 540 cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~--~~~v~~l~~ 617 (707)
T KOG0263|consen 540 CVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN--GSLVKQLKG 617 (707)
T ss_pred eEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC--Ccchhhhhc
Confidence 456788889999999999999999999999999988777777777888778888899999999999998 888877777
Q ss_pred CCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 714 EVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 714 ~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+.....+..+..+++.+.+|+.|..|.+||
T Consensus 618 Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD 647 (707)
T KOG0263|consen 618 HTGTIYSLSFSRDGNVLASGGADNSVRLWD 647 (707)
T ss_pred ccCceeEEEEecCCCEEEecCCCCeEEEEE
Confidence 777777888888999999999999999998
No 247
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.84 E-value=6.5e-07 Score=97.12 Aligned_cols=257 Identities=10% Similarity=0.073 Sum_probs=172.5
Q ss_pred CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEE
Q 002615 566 SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIW 645 (900)
Q Consensus 566 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~ 645 (900)
.+.+..||.+|++++.++..+ +..+..+.+.+.+|++|..+|.|-.||..+...+=+.+.++....+....+++...+
T Consensus 393 ~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~v 470 (888)
T KOG0306|consen 393 GESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFV 470 (888)
T ss_pred CCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceE
Confidence 456999999999999877666 344667888888999999999999999998887766666665555556666777788
Q ss_pred EecCCCeEEEEECCC-----CeEEE--------eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee
Q 002615 646 CGSHDHNLYALDFRN-----YRCVY--------KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE 712 (900)
Q Consensus 646 ~gs~dg~l~~~d~~~-----g~~~w--------~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~ 712 (900)
+|+.|.++..||-+- |.... ...+... ..+..+++++..|.++-.+.++..|-+++ -+..-+..
T Consensus 471 T~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~dd-vL~v~~Spdgk~LaVsLLdnTVkVyflDt--lKFflsLY 547 (888)
T KOG0306|consen 471 TGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDD-VLCVSVSPDGKLLAVSLLDNTVKVYFLDT--LKFFLSLY 547 (888)
T ss_pred EecCCcEEEEEeEEEEeccCcccceeeeeccceEEecccc-EEEEEEcCCCcEEEEEeccCeEEEEEecc--eeeeeeec
Confidence 999999999887531 21111 1111222 22334455567777788888888888877 66665665
Q ss_pred cCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeee-cCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc
Q 002615 713 LEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRC-RTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN 790 (900)
Q Consensus 713 ~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~-~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~ 790 (900)
.+.-...+..++++...++.|+.|.++-.|- .-|...-.+ ...+.+.+.-. .-.....|.++.||.+..||.+.-+
T Consensus 548 GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F--~P~~~~FFt~gKD~kvKqWDg~kFe 625 (888)
T KOG0306|consen 548 GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQF--LPKTHLFFTCGKDGKVKQWDGEKFE 625 (888)
T ss_pred ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEE--cccceeEEEecCcceEEeechhhhh
Confidence 6655557778888899999999998887775 434332111 11122222211 1134467778899999999976555
Q ss_pred eeeEEecCC-ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 791 LLWEYSVGD-PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 791 ~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
..-+++.+. .++..... +.|++++.++.|..|++|....
T Consensus 626 ~iq~L~~H~~ev~cLav~------------~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 626 EIQKLDGHHSEVWCLAVS------------PNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred hheeeccchheeeeeEEc------------CCCCeEEeccCCceeEeeeccC
Confidence 444444332 33333222 2388999999999999998764
No 248
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=98.84 E-value=5e-08 Score=96.69 Aligned_cols=260 Identities=10% Similarity=0.062 Sum_probs=155.9
Q ss_pred eEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeE
Q 002615 558 IYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVV 637 (900)
Q Consensus 558 ~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 637 (900)
..++.|+.||.|..||+.+-+++|.+..+.......++.. +. ++..+.|.+|..|.. .|..+.++.....+....
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~-~~tvgdDKtvK~wk~-~~~p~~tilg~s~~~gId-- 154 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TS-FFTVGDDKTVKQWKI-DGPPLHTILGKSVYLGID-- 154 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-cc-eEEecCCcceeeeec-cCCcceeeeccccccccc--
Confidence 4688999999999999999999999998886666666665 33 444445777777763 344444443322221111
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccC-CEEEEEeCCCcEEEEEcCCCCceeeeEeecCCc
Q 002615 638 DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVH-DVLYVASTSGRLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 638 ~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~-~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
....+.+++.+ ...+-.||..--.++..+..+-....+.-+.+.. ..|..+..++.++.||... ++++.+......
T Consensus 155 h~~~~~~FaTc-Ge~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~--~~Pl~KVi~~mR 231 (433)
T KOG0268|consen 155 HHRKNSVFATC-GEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQ--ASPLKKVILTMR 231 (433)
T ss_pred ccccccccccc-CceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEeccc--CCccceeeeecc
Confidence 11123334333 3458889987766776666554433333333222 4455555899999999988 777766544322
Q ss_pred ceeeeeeeeCCCEEEEEeecCcEEEEC-CCC-CEEeeecCC-CceeccccccccCCCeEEEEeeCCeEEEEeCCCCceee
Q 002615 717 AFASLCITSANRHVICCLVDGHVVALD-SSG-SIIWRCRTG-GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLW 793 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G-~~~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w 793 (900)
. ...+..+..-.+.+++.|..+|.+| ..- ..+-.+... ..+.... ..-.+..++.|++|..|..|....|.-.-
T Consensus 232 T-N~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVd--fsptG~EfvsgsyDksIRIf~~~~~~SRd 308 (433)
T KOG0268|consen 232 T-NTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVD--FSPTGQEFVSGSYDKSIRIFPVNHGHSRD 308 (433)
T ss_pred c-cceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEec--cCCCcchhccccccceEEEeecCCCcchh
Confidence 1 2334444444566778899999999 432 222222111 1111111 11235678999999999999988775432
Q ss_pred EEec--CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 794 EYSV--GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 794 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
.|.. -..+....+.. +..+|+.|+++|.|++|..+
T Consensus 309 iYhtkRMq~V~~Vk~S~------------Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 309 IYHTKRMQHVFCVKYSM------------DSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred hhhHhhhheeeEEEEec------------cccEEEecCCCcceeeeecc
Confidence 2211 11222222222 27899999999999999775
No 249
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.83 E-value=6.4e-06 Score=86.48 Aligned_cols=276 Identities=13% Similarity=0.082 Sum_probs=161.3
Q ss_pred CCCEEEEEeeC-----CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecC----------CCeEEEEECCCCe
Q 002615 598 DFSQVVVGCYK-----GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSH----------DHNLYALDFRNYR 662 (900)
Q Consensus 598 ~~~~i~vg~~d-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~----------dg~l~~~d~~~g~ 662 (900)
+..++||-... +.++.+|..+++.+-.+..+..... +++++++.+|++.. +..|..||.++++
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~--~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP--VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCce--eECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 33456665543 7899999999999988887654443 36777888998755 6789999999999
Q ss_pred EEEeeccCCc-------cccCceeeccCCEEEEEeC--CCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEE
Q 002615 663 CVYKLPCGGS-------IFGSPAIDEVHDVLYVAST--SGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICC 733 (900)
Q Consensus 663 ~~w~~~~~~~-------~~~~~~~~~~~~~l~v~t~--~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~ 733 (900)
.+.++..+.. ......+++++..+|+... +..+..+|+.+ ++.+-+...+.... .........+ +-
T Consensus 89 ~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~--~kvv~ei~vp~~~~--vy~t~e~~~~-~~ 163 (352)
T TIGR02658 89 PIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG--KAFVRMMDVPDCYH--IFPTANDTFF-MH 163 (352)
T ss_pred EEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCC--CcEEEEEeCCCCcE--EEEecCCccE-EE
Confidence 9998887543 1223456666778998773 57899999888 88887776644221 1112222222 23
Q ss_pred eecCcEEEE--CCCCCEEee-ec----CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCce----eeEEe-cCCce
Q 002615 734 LVDGHVVAL--DSSGSIIWR-CR----TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNL----LWEYS-VGDPI 801 (900)
Q Consensus 734 ~~~g~v~~~--d~~G~~~w~-~~----~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~----~w~~~-~~~~~ 801 (900)
+.||....+ +.+|+..-. .. ...+++..|.... .++..++.+..|.|+.+|..+.+. .|... .....
T Consensus 164 ~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~-~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~ 242 (352)
T TIGR02658 164 CRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSN-KSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKA 242 (352)
T ss_pred eecCceEEEEecCCCceEEeeeeeecCCccccccCCceEc-CCCcEEEEecCCeEEEEecCCCcceecceeeeccccccc
Confidence 345655443 355653311 11 1233444442222 244555455559999999544332 23321 11100
Q ss_pred ecccccccccccccccccCCCeEEEEEc----------CCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCc
Q 002615 802 TASAYIDEHLQLKLESCLSIDRLVCICT----------SSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSP 871 (900)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~----------~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~ 871 (900)
..+....++. ......++.+|+.. ..+.|+++|..++ +.............-.
T Consensus 243 --~~wrP~g~q~--ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~-------------kvi~~i~vG~~~~~ia 305 (352)
T TIGR02658 243 --DGWRPGGWQQ--VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTG-------------KRLRKIELGHEIDSIN 305 (352)
T ss_pred --cccCCCccee--EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCC-------------eEEEEEeCCCceeeEE
Confidence 0000000000 11223478888853 2246999998876 5555555444332211
Q ss_pred ee-eCC-EEEEeee-CCeEEEEEccccccc
Q 002615 872 VM-IGG-RVFVGCR-DDYIYCIALETQHLE 898 (900)
Q Consensus 872 ~~-~~~-~l~vg~~-dg~l~~ld~~tg~~~ 898 (900)
+- ++. .||+.+. ++.|..+|..+++..
T Consensus 306 vS~Dgkp~lyvtn~~s~~VsViD~~t~k~i 335 (352)
T TIGR02658 306 VSQDAKPLLYALSTGDKTLYIFDAETGKEL 335 (352)
T ss_pred ECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence 11 456 7887774 677999999998764
No 250
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=5.8e-07 Score=96.60 Aligned_cols=265 Identities=14% Similarity=0.058 Sum_probs=169.9
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-CCccccCcee
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-GGSIFGSPAI 679 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~~~~~~~~~~ 679 (900)
.+.||. ...+|+|+..+|++.-..+.+....++..+.+++..|.+|+.+|.+..||.++.+.+..+.. +..-+++..-
T Consensus 190 ~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW 268 (484)
T KOG0305|consen 190 VLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAW 268 (484)
T ss_pred eEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEec
Confidence 455553 44699999999998776666556667777888889999999999999999988777666655 3333333333
Q ss_pred eccCCEEEEEeCCCcEEEEEcCCCCceeeeE-eecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC-
Q 002615 680 DEVHDVLYVASTSGRLTAISVKALPFHTLWL-HELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG- 756 (900)
Q Consensus 680 ~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~-~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~- 756 (900)
+...+-.|+.+|.+..+|... .+..-. ...+....-......++..+..|+.|+.++++| ..-+++.++....
T Consensus 269 --~~~~lssGsr~~~I~~~dvR~--~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~a 344 (484)
T KOG0305|consen 269 --NSSVLSSGSRDGKILNHDVRI--SQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTA 344 (484)
T ss_pred --cCceEEEecCCCcEEEEEEec--chhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccce
Confidence 347788899999999999876 433332 222333333445666788888899999999999 4444444443221
Q ss_pred ceeccccccccCCCeEEEE--eeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcE
Q 002615 757 PIFAGPCTSFALPSQVLIC--SRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSI 834 (900)
Q Consensus 757 ~~~~~~~~~~~~~~~l~~g--~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v 834 (900)
.+.... ...-..+.|.+| +.|+.|..||..+|+.+-....++.+.+..+.-.. .+-..-.|..++.|
T Consensus 345 AVKA~a-wcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~----------kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 345 AVKALA-WCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKY----------KELLSTHGYSENQI 413 (484)
T ss_pred eeeEee-eCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCC----------CEEEEecCCCCCcE
Confidence 111111 111124455555 67999999999999998888877776555443321 01222345667788
Q ss_pred EEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEEccc
Q 002615 835 HILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 835 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~t 894 (900)
.+|+..+- +......-+...+-..+. ++..+.+|..|.+|..|+..+
T Consensus 414 ~lw~~ps~-------------~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 414 TLWKYPSM-------------KLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred EEEecccc-------------ceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 88876531 112222222221111222 467899999999999998765
No 251
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.82 E-value=5.5e-07 Score=92.33 Aligned_cols=195 Identities=12% Similarity=0.143 Sum_probs=129.6
Q ss_pred eceeEecCCCEEEEEeeCCEE--EEEECCCCcEEEEEecCCceeeeeeEeCCCC-EEEEecCCCeEEEEECCCCeEEEee
Q 002615 591 CSAAVLADFSQVVVGCYKGKI--YFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQ-LIWCGSHDHNLYALDFRNYRCVYKL 667 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l--~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~-~i~~gs~dg~l~~~d~~~g~~~w~~ 667 (900)
.++.+.+....+.++..|+.+ |.+|-++...+.......-......+.+++. .|++++....+|.||+.++++....
T Consensus 217 ~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~ 296 (514)
T KOG2055|consen 217 TSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLK 296 (514)
T ss_pred eEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccccc
Confidence 356677777788899999975 5556455444444444443334445555555 7888898999999999998765433
Q ss_pred ccCCc---cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-
Q 002615 668 PCGGS---IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD- 743 (900)
Q Consensus 668 ~~~~~---~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d- 743 (900)
...+- ..-.-.++..+..|.+....|.|+.+...+ ++.+-..+..+.+ ....+..++..+|+++.+|.|+.||
T Consensus 297 ~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT--~eli~s~KieG~v-~~~~fsSdsk~l~~~~~~GeV~v~nl 373 (514)
T KOG2055|consen 297 PPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKT--KELITSFKIEGVV-SDFTFSSDSKELLASGGTGEVYVWNL 373 (514)
T ss_pred CCCCcccchhheeEecCCCCeEEEcccCceEEeehhhh--hhhhheeeeccEE-eeEEEecCCcEEEEEcCCceEEEEec
Confidence 33221 111122334457888888899999998887 7777666665443 4556667788899998899999999
Q ss_pred CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCC
Q 002615 744 SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQES 788 (900)
Q Consensus 744 ~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t 788 (900)
..-..+.++...+.+.............+.+|+..|.|..||.++
T Consensus 374 ~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 374 RQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred CCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 666777666665555333211122344677788889999998543
No 252
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.80 E-value=4.7e-06 Score=89.72 Aligned_cols=287 Identities=15% Similarity=0.142 Sum_probs=157.4
Q ss_pred ccccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee-CCEEEE
Q 002615 535 ELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY-KGKIYF 613 (900)
Q Consensus 535 ~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~-dg~l~~ 613 (900)
.+-+++++....+. +....++.++|+.+.+|.|..+|+.++++..++..+... .+..++.+|.+++++++ .+.+..
T Consensus 28 ~~~~i~~~~~~h~~--~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~-~~i~~s~DG~~~~v~n~~~~~v~v 104 (369)
T PF02239_consen 28 VVARIPTGGAPHAG--LKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNP-RGIAVSPDGKYVYVANYEPGTVSV 104 (369)
T ss_dssp EEEEEE-STTEEEE--EE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEE-EEEEE--TTTEEEEEEEETTEEEE
T ss_pred EEEEEcCCCCceeE--EEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCc-ceEEEcCCCCEEEEEecCCCceeE
Confidence 34455555433222 223445778999999999999999999999998887664 36788899999999985 789999
Q ss_pred EECCCCcEEEEEecCCce------eeeeeEe-CCCC-EEEEecCCCeEEEEECCCCeEEEe--eccCCccccCceeeccC
Q 002615 614 LDYLTGDIYWTFQTCGEV------KCQPVVD-APRQ-LIWCGSHDHNLYALDFRNYRCVYK--LPCGGSIFGSPAIDEVH 683 (900)
Q Consensus 614 ~d~~tG~~~w~~~~~~~~------~~~~~~~-~~~~-~i~~gs~dg~l~~~d~~~g~~~w~--~~~~~~~~~~~~~~~~~ 683 (900)
+|.+|.+++.++.+++.. ....++. +.+. .++.--..+.++.+|..+.+.+.. ...+.. .-...+++++
T Consensus 105 ~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~-~~D~~~dpdg 183 (369)
T PF02239_consen 105 IDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRF-PHDGGFDPDG 183 (369)
T ss_dssp EETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TT-EEEEEE-TTS
T ss_pred eccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccc-ccccccCccc
Confidence 999999998887664321 1222332 2333 233333447788888766543322 222221 1122445545
Q ss_pred CEEEEEe-CCCcEEEEEcCCCCceeeeEeecCCcce---eeeeeeeCCCEEEEEeecCc----------EEEEC-CCCCE
Q 002615 684 DVLYVAS-TSGRLTAISVKALPFHTLWLHELEVPAF---ASLCITSANRHVICCLVDGH----------VVALD-SSGSI 748 (900)
Q Consensus 684 ~~l~v~t-~~g~l~~~~~~~~~g~~~w~~~~~~~~~---~s~~~~~~~~~i~~~~~~g~----------v~~~d-~~G~~ 748 (900)
..++++. .+..+..+|.++ ++..+..+.+.... ....+.+..+-+|.-...+. +..++ .+.+.
T Consensus 184 ry~~va~~~sn~i~viD~~~--~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv 261 (369)
T PF02239_consen 184 RYFLVAANGSNKIAVIDTKT--GKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV 261 (369)
T ss_dssp SEEEEEEGGGTEEEEEETTT--TEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE
T ss_pred ceeeecccccceeEEEeecc--ceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeE
Confidence 6666653 466788899887 88887766543221 11123334445554433222 22234 44555
Q ss_pred EeeecCCCc-eeccccccccCCCeEEEE----eeCCeEEEEeCCCCceeeEEecCCc--eecccccccccccccccccCC
Q 002615 749 IWRCRTGGP-IFAGPCTSFALPSQVLIC----SRNGSIYSFEQESGNLLWEYSVGDP--ITASAYIDEHLQLKLESCLSI 821 (900)
Q Consensus 749 ~w~~~~~~~-~~~~~~~~~~~~~~l~~g----~~dg~l~~~d~~tG~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 821 (900)
+-+.+..+. .|... .-....+|+. ...+.|..+|.++-+..-++..... +.-.-+ ..+
T Consensus 262 v~~I~~~G~glFi~t---hP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef------------~~d 326 (369)
T PF02239_consen 262 VKTIPTQGGGLFIKT---HPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEF------------NPD 326 (369)
T ss_dssp EEEEE-SSSS--EE-----TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-------------TT
T ss_pred EEEEECCCCcceeec---CCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEE------------CCC
Confidence 555554332 22111 2245689988 3457899999998866544432222 222111 123
Q ss_pred CeEEEEEcCCC--cEEEEEeecC
Q 002615 822 DRLVCICTSSG--SIHILRVNLD 842 (900)
Q Consensus 822 ~~~l~~g~~~G--~v~~~d~~~~ 842 (900)
+..+|+...++ .|.+||.++.
T Consensus 327 G~~v~vS~~~~~~~i~v~D~~Tl 349 (369)
T PF02239_consen 327 GKEVWVSVWDGNGAIVVYDAKTL 349 (369)
T ss_dssp SSEEEEEEE--TTEEEEEETTTT
T ss_pred CCEEEEEEecCCCEEEEEECCCc
Confidence 88888876654 5999999865
No 253
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.79 E-value=2.8e-07 Score=101.68 Aligned_cols=182 Identities=13% Similarity=0.205 Sum_probs=126.5
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCccee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFA 719 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~ 719 (900)
++.|+..+-|.++..|++...+|+..|.....+ .+..+.+ +++..+.|+.||.+..|++.. -++..-.++. ..+.
T Consensus 380 n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfV-TcVaFnPvDDryFiSGSLD~KvRiWsI~d--~~Vv~W~Dl~-~lIT 455 (712)
T KOG0283|consen 380 NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFV-TCVAFNPVDDRYFISGSLDGKVRLWSISD--KKVVDWNDLR-DLIT 455 (712)
T ss_pred CCeeEeccccccEEeecCCCcceeeEEecCCee-EEEEecccCCCcEeecccccceEEeecCc--CeeEeehhhh-hhhe
Confidence 577889999999999999999999888765544 4444444 345677799999999999886 4444333443 5557
Q ss_pred eeeeeeCCCEEEEEeecCcEEEECCCC-CEE--eeecC-------CCceeccccccccCCCeEEEEeeCCeEEEEeCCCC
Q 002615 720 SLCITSANRHVICCLVDGHVVALDSSG-SII--WRCRT-------GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 720 s~~~~~~~~~i~~~~~~g~v~~~d~~G-~~~--w~~~~-------~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG 789 (900)
+.++.++++..++|+.+|..+.|+..| +.. |++.. +..|...-+... ..+.|++.+.|..|..||..+-
T Consensus 456 Avcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~-~~~~vLVTSnDSrIRI~d~~~~ 534 (712)
T KOG0283|consen 456 AVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPG-DPDEVLVTSNDSRIRIYDGRDK 534 (712)
T ss_pred eEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCC-CCCeEEEecCCCceEEEeccch
Confidence 888899999999999999999999433 332 33321 112222222222 2347999999999999998777
Q ss_pred ceeeEEecCCce---ecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 790 NLLWEYSVGDPI---TASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 790 ~~~w~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
+++-+++-.... ....+. .++..|+++++|..||+|+.
T Consensus 535 ~lv~KfKG~~n~~SQ~~Asfs------------~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 535 DLVHKFKGFRNTSSQISASFS------------SDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred hhhhhhcccccCCcceeeeEc------------cCCCEEEEeecCceEEEEeC
Confidence 777665522211 111111 23889999999999999986
No 254
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.79 E-value=3.9e-07 Score=93.05 Aligned_cols=231 Identities=13% Similarity=0.093 Sum_probs=142.9
Q ss_pred CceEEEEecCCCeEEEEECCCC-cEEEEEecCC-----------c-----eeece--eEe---cCCCEEEEEeeCCEEEE
Q 002615 556 SDIYLFVGSHSHKFICADAKRS-SVLWEIKLEG-----------R-----IECSA--AVL---ADFSQVVVGCYKGKIYF 613 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG-~~~w~~~~~~-----------~-----~~~~~--~~~---~~~~~i~vg~~dg~l~~ 613 (900)
.++++.+|+.+-.|-.||++-- .+.-.+.++. + -.+.+ .++ .-.+.++.|+.|.+|..
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 3569999999999999998531 1111122210 0 00000 011 11246788999999999
Q ss_pred EECCCCcEEEEEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECC---CCeEEEeeccCCc-cccCceeeccCCEEEE
Q 002615 614 LDYLTGDIYWTFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFR---NYRCVYKLPCGGS-IFGSPAIDEVHDVLYV 688 (900)
Q Consensus 614 ~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~---~g~~~w~~~~~~~-~~~~~~~~~~~~~l~v 688 (900)
||..+|+..-.+..++.-+.+..+.+ ....++.|++|+++...|.+ .-...|++...-. +...+. .....++
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~---se~~f~~ 347 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPH---SENSFFV 347 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCC---CceeEEE
Confidence 99999999888775544444444443 45678899999999999987 4456677754321 111121 1367888
Q ss_pred EeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeC-CCEEEEEeecCcEEEEC---CCCCEEeeecCCCceeccccc
Q 002615 689 ASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSA-NRHVICCLVDGHVVALD---SSGSIIWRCRTGGPIFAGPCT 764 (900)
Q Consensus 689 ~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~-~~~i~~~~~~g~v~~~d---~~G~~~w~~~~~~~~~~~~~~ 764 (900)
+|.+|.++.+|.+. .|+++|+.+.+...+++..+... .+.+..++.++.+..++ .+++.+......-........
T Consensus 348 ~tddG~v~~~D~R~-~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~ 426 (463)
T KOG0270|consen 348 STDDGTVYYFDIRN-PGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFAL 426 (463)
T ss_pred ecCCceEEeeecCC-CCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeeccc
Confidence 99999999999986 57999999988776666555332 45666677777777776 233322211111111111111
Q ss_pred cccCCCeEEEEeeCCeEEEEeCCCCc
Q 002615 765 SFALPSQVLICSRNGSIYSFEQESGN 790 (900)
Q Consensus 765 ~~~~~~~l~~g~~dg~l~~~d~~tG~ 790 (900)
.......+.+|...+.+..||..++.
T Consensus 427 ~~~~a~~la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 427 DPDVAFTLAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred CCCcceEEEecCccceEEEeecccCh
Confidence 12234567777777778888876654
No 255
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=98.79 E-value=2.3e-06 Score=81.75 Aligned_cols=219 Identities=10% Similarity=0.043 Sum_probs=146.1
Q ss_pred CCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEE
Q 002615 586 EGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVY 665 (900)
Q Consensus 586 ~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w 665 (900)
+.|.....-+..+|+.++..+.|....+|-..+|+.+-++..+.....+.-++-+...+++|+.|..+..||.++|+++.
T Consensus 9 HERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la 88 (327)
T KOG0643|consen 9 HERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLA 88 (327)
T ss_pred CccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEE
Confidence 33434445566778888988889888888888999998888776555555566667889999999999999999999998
Q ss_pred eeccCCccccCceeeccCCEEEEEeC-----CCcEEEEEcCCCC-----ceeeeEeecCCcceeeeeeeeCCCEEEEEee
Q 002615 666 KLPCGGSIFGSPAIDEVHDVLYVAST-----SGRLTAISVKALP-----FHTLWLHELEVPAFASLCITSANRHVICCLV 735 (900)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~v~t~-----~g~l~~~~~~~~~-----g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~ 735 (900)
.++.+.++...-.... ++.+.+.+. .+.+..+|+...+ -+++.....+.....+....+.+..++.|..
T Consensus 89 ~~k~~~~Vk~~~F~~~-gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe 167 (327)
T KOG0643|consen 89 TWKTNSPVKRVDFSFG-GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHE 167 (327)
T ss_pred EeecCCeeEEEeeccC-CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecC
Confidence 8777666554433322 344444442 3567777776422 1234444444333344455566889999999
Q ss_pred cCcEEEEC-CCCCEEeeecC-CCceeccccccccCCCe-EEEEeeCCeEEEEeCCCCceeeEEecCCceeccccc
Q 002615 736 DGHVVALD-SSGSIIWRCRT-GGPIFAGPCTSFALPSQ-VLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYI 807 (900)
Q Consensus 736 ~g~v~~~d-~~G~~~w~~~~-~~~~~~~~~~~~~~~~~-l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 807 (900)
+|.|..|| .+|++.-.-.. ....... +....+.. .+.++.|.+-..+|..+-+++-+|....++.+.++.
T Consensus 168 ~G~is~~da~~g~~~v~s~~~h~~~Ind--~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aais 240 (327)
T KOG0643|consen 168 DGSISIYDARTGKELVDSDEEHSSKIND--LQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAIS 240 (327)
T ss_pred CCcEEEEEcccCceeeechhhhcccccc--ccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecc
Confidence 99999999 88876533211 1111111 11222334 555678889999999998888888877776655443
No 256
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=98.78 E-value=1.3e-06 Score=88.95 Aligned_cols=232 Identities=11% Similarity=0.047 Sum_probs=151.6
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
...+..|..|..+.++|..+++.+-.++.+..-.+...+.++...+.+++.|-.++.|...+-...-....+...+....
T Consensus 231 ~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls 310 (506)
T KOG0289|consen 231 SSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLS 310 (506)
T ss_pred CCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeee
Confidence 45677888888899999999999887877766556677777777889999999999998765543333333333333344
Q ss_pred EeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC--ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 637 VDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG--SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 637 ~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~--~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
..+.+.+++.++.|++....|..+|..+-+....+ --+.+..+.+++-.+-.|+.+|.+..||++. +...-++..+
T Consensus 311 ~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks--~~~~a~Fpgh 388 (506)
T KOG0289|consen 311 LHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS--QTNVAKFPGH 388 (506)
T ss_pred eccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC--ccccccCCCC
Confidence 56678889999999988888999999887765532 2355666777444445577899999999987 5556566555
Q ss_pred CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecC--CCceeccccccccC-CCeEEEEeeCCeEEEEeCCCCc
Q 002615 715 VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRT--GGPIFAGPCTSFAL-PSQVLICSRNGSIYSFEQESGN 790 (900)
Q Consensus 715 ~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~--~~~~~~~~~~~~~~-~~~l~~g~~dg~l~~~d~~tG~ 790 (900)
.....+..+..++=.+.+++.|+.|.+|| ..-+..-++.. ..++.+. .++. +..+.+++.+=.||.++.. +
T Consensus 389 t~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~---~fD~SGt~L~~~g~~l~Vy~~~k~--~ 463 (506)
T KOG0289|consen 389 TGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSL---SFDQSGTYLGIAGSDLQVYICKKK--T 463 (506)
T ss_pred CCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeE---EEcCCCCeEEeecceeEEEEEecc--c
Confidence 54445555554444466677788899999 54332222222 2222222 2333 3355566555556666543 4
Q ss_pred eeeEE
Q 002615 791 LLWEY 795 (900)
Q Consensus 791 ~~w~~ 795 (900)
-.|+.
T Consensus 464 k~W~~ 468 (506)
T KOG0289|consen 464 KSWTE 468 (506)
T ss_pred cccee
Confidence 45753
No 257
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.75 E-value=3e-07 Score=93.80 Aligned_cols=230 Identities=12% Similarity=0.108 Sum_probs=145.1
Q ss_pred CCCEEEEEeeCCEEEEEECCCCcE-EEEEecC----------------Cceee----eeeE-eCCCCEEEEecCCCeEEE
Q 002615 598 DFSQVVVGCYKGKIYFLDYLTGDI-YWTFQTC----------------GEVKC----QPVV-DAPRQLIWCGSHDHNLYA 655 (900)
Q Consensus 598 ~~~~i~vg~~dg~l~~~d~~tG~~-~w~~~~~----------------~~~~~----~~~~-~~~~~~i~~gs~dg~l~~ 655 (900)
.|+++.+|+.+-.|-.||+.=-.. .-.+..+ ....+ ...+ -...+.|..|+.|.+|..
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 356899999999999998642111 1111111 00000 0111 112467888999999999
Q ss_pred EECCCCeEEEeeccCCccccCce-eeccCCEEEEEeCCCcEEEEEcCC-CCceeeeEeecCCcceeeeeeee-CCCEEEE
Q 002615 656 LDFRNYRCVYKLPCGGSIFGSPA-IDEVHDVLYVASTSGRLTAISVKA-LPFHTLWLHELEVPAFASLCITS-ANRHVIC 732 (900)
Q Consensus 656 ~d~~~g~~~w~~~~~~~~~~~~~-~~~~~~~l~v~t~~g~l~~~~~~~-~~g~~~w~~~~~~~~~~s~~~~~-~~~~i~~ 732 (900)
||..+|++.-.+...+....+.. .......|+.|+.++++...|.+. ......|++....... .... ....+++
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv---~w~~~se~~f~~ 347 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV---AWDPHSENSFFV 347 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE---EecCCCceeEEE
Confidence 99999999988875544333333 333346788899999999999772 1244678776543221 1211 2456788
Q ss_pred EeecCcEEEEC--CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCcee--e--EEecCCceecccc
Q 002615 733 CLVDGHVVALD--SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLL--W--EYSVGDPITASAY 806 (900)
Q Consensus 733 ~~~~g~v~~~d--~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~--w--~~~~~~~~~~~~~ 806 (900)
++.+|.++-+| +.|+.+|+......-.++.++.....+.+..++.++.|..|+...-... . .++++- ....
T Consensus 348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~r--l~c~- 424 (463)
T KOG0270|consen 348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGR--LHCF- 424 (463)
T ss_pred ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccc--eeec-
Confidence 88999999999 6789999988765555555555666778888888998888876433221 1 111111 1110
Q ss_pred cccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 807 IDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
..+......+.+|+..+.+.+||..++
T Consensus 425 ---------~~~~~~a~~la~GG~k~~~~vwd~~~~ 451 (463)
T KOG0270|consen 425 ---------ALDPDVAFTLAFGGEKAVLRVWDIFTN 451 (463)
T ss_pred ---------ccCCCcceEEEecCccceEEEeecccC
Confidence 011223678888888888999998754
No 258
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.73 E-value=3.5e-06 Score=80.24 Aligned_cols=245 Identities=15% Similarity=0.104 Sum_probs=159.1
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEE--EecCC-ceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWE--IKLEG-RIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~--~~~~~-~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
.+.++..|+.++.+..|+..-++.+-+ ...+. .+. ..+..+ ..+.+++.+.|..+..||...++..-.....++.
T Consensus 31 ~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svd-ql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en 109 (313)
T KOG1407|consen 31 DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVD-QLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGEN 109 (313)
T ss_pred cCceeeecccCCceEEEEecchhhhhhhcccCCCcchh-hheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcc
Confidence 566788899999999898876654422 22222 222 223332 3346777888899999999999998777665433
Q ss_pred eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-CCcEEEEEcCCCCceeeeE
Q 002615 632 KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~~w~ 710 (900)
.. ..+.++++++.++..|..|..+|.++-++.-..+..-.. .-.+.. ..+.+++.|. .|.+-.+.... -+++..
T Consensus 110 i~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~-ne~~w~-~~nd~Fflt~GlG~v~ILsyps--Lkpv~s 184 (313)
T KOG1407|consen 110 IN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEV-NEISWN-NSNDLFFLTNGLGCVEILSYPS--LKPVQS 184 (313)
T ss_pred eE-EEEcCCCCEEEEecCcccEEEEEecccceeehhccccee-eeeeec-CCCCEEEEecCCceEEEEeccc--cccccc
Confidence 22 356678899999999999999999887766443321111 111112 2345555554 48888887665 677777
Q ss_pred eecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec-CCCceecccccccc-CCCeEEEEeeCCeEEEEeCC
Q 002615 711 HELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCR-TGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQE 787 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~-~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~ 787 (900)
.+.+........+.+++.++.+|+.|..+-.|| ..--.+-.++ ..-|+-.. ++. .+..|..++.|..|-.-+.+
T Consensus 185 i~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTl---SFS~dg~~lASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 185 IKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTL---SFSHDGRMLASASEDHFIDIAEVE 261 (313)
T ss_pred cccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEE---EeccCcceeeccCccceEEeEecc
Confidence 777665555666777888999999998888888 3221111111 12222221 122 24456777889888888999
Q ss_pred CCceeeEEecCCceeccccccc
Q 002615 788 SGNLLWEYSVGDPITASAYIDE 809 (900)
Q Consensus 788 tG~~~w~~~~~~~~~~~~~~~~ 809 (900)
||..+|+++..++.++.+....
T Consensus 262 tGd~~~eI~~~~~t~tVAWHPk 283 (313)
T KOG1407|consen 262 TGDRVWEIPCEGPTFTVAWHPK 283 (313)
T ss_pred cCCeEEEeeccCCceeEEecCC
Confidence 9999999998888766655443
No 259
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=98.73 E-value=1.4e-07 Score=94.94 Aligned_cols=235 Identities=11% Similarity=-0.011 Sum_probs=151.3
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-C
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-G 670 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~ 670 (900)
.+..+++|..+++|++.|.+-.|+..+-...-..+.++..+....+..++..++.|+.+|.|..|++.-..+. .++. .
T Consensus 101 ~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk-~~~ahh 179 (464)
T KOG0284|consen 101 VVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVK-IIQAHH 179 (464)
T ss_pred eEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhH-HhhHhh
Confidence 4567889899999999999999984221111112234555555566667788889999999999986533222 2221 2
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
..-+...++++++.....++.+|.+..||... .+..-....+.-...+....+..+.|++|+.|..|-.+| ++|+.+
T Consensus 180 ~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~--~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl 257 (464)
T KOG0284|consen 180 AEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM--PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCL 257 (464)
T ss_pred hhhhheeccCCCCceeEEecCCCeEEEEeccC--CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchh
Confidence 12233344555567788889999999999765 333323333333345566667789999999999999999 899877
Q ss_pred eeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEc
Q 002615 750 WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICT 829 (900)
Q Consensus 750 w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 829 (900)
-+........... ......+.|..++.|..+..||..+-+.+..+..+..-+....... ...+++.+|+
T Consensus 258 ~tlh~HKntVl~~-~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP----------~~~~lftsgg 326 (464)
T KOG0284|consen 258 ATLHGHKNTVLAV-KFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP----------LNESLFTSGG 326 (464)
T ss_pred hhhhhccceEEEE-EEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc----------ccccceeecc
Confidence 5543322211111 1122346788999999999999986666666654443322221111 1267888899
Q ss_pred CCCcEEEEEee
Q 002615 830 SSGSIHILRVN 840 (900)
Q Consensus 830 ~~G~v~~~d~~ 840 (900)
.||.|+.|...
T Consensus 327 ~Dgsvvh~~v~ 337 (464)
T KOG0284|consen 327 SDGSVVHWVVG 337 (464)
T ss_pred CCCceEEEecc
Confidence 99999999775
No 260
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.71 E-value=5.3e-07 Score=99.62 Aligned_cols=184 Identities=13% Similarity=0.065 Sum_probs=136.3
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
++++|...|+|.++..|++.+.+++-.+...+- .+++.+.+ |+.+++.||-||.+..|+..+.++.--.+.. .++++
T Consensus 379 Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~Hndf-VTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITA 456 (712)
T KOG0283|consen 379 KNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDF-VTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITA 456 (712)
T ss_pred cCCeeEeccccccEEeecCCCcceeeEEecCCe-eEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhh-hhhee
Confidence 578999999999999999999999977765554 45677765 5678999999999999999988876545665 45566
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc---------CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC---------GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~---------~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
.++.++++..++|+.+|..+.|+...-+..-..++ ++.+.+--+.....+.|+|.+.|..|..||..+ -
T Consensus 457 vcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~--~ 534 (712)
T KOG0283|consen 457 VCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRD--K 534 (712)
T ss_pred EEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccc--h
Confidence 77888899999999999999999887666544332 122333333333346799999999999999854 3
Q ss_pred eeeeEeecCC--cceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 706 HTLWLHELEV--PAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 706 ~~~w~~~~~~--~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+++-.++... .......+..++..|++++.|..||.|+
T Consensus 535 ~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~ 574 (712)
T KOG0283|consen 535 DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWK 574 (712)
T ss_pred hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEe
Confidence 3443333211 1123445666889999999999999998
No 261
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.71 E-value=2.4e-06 Score=81.36 Aligned_cols=202 Identities=15% Similarity=0.078 Sum_probs=144.3
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
...+..++.+..+..||..++++.-.....+.. ...+.+++|+++.+|..|..|..+|..+-++.-.++..-.+.- ..
T Consensus 77 ~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne-~~ 154 (313)
T KOG1407|consen 77 PDLFATASGDKTIRIWDIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNE-IS 154 (313)
T ss_pred CcceEEecCCceEEEEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeee-ee
Confidence 445677888889999999999998877665432 2568889999999999999999999988887765544332221 12
Q ss_pred EeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCc
Q 002615 637 VDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 637 ~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
+..++...+..+..|.+-.+....-+++..++.+...-.+..+++.+..+.+|+.+..+..||++. --.+-.+....-
T Consensus 155 w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E--LiC~R~isRldw 232 (313)
T KOG1407|consen 155 WNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE--LICERCISRLDW 232 (313)
T ss_pred ecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH--hhhheeeccccC
Confidence 333345555555568888888777777777776654444455677788899999999999999775 222222222222
Q ss_pred ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccc
Q 002615 717 AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGP 762 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~ 762 (900)
...+..+..++.++..++.|-.|-.-+ .+|..+|+++..++.++..
T Consensus 233 pVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVA 279 (313)
T KOG1407|consen 233 PVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVA 279 (313)
T ss_pred ceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEE
Confidence 234556666788888888887777777 8999999999888776654
No 262
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=98.70 E-value=9.8e-07 Score=87.20 Aligned_cols=187 Identities=14% Similarity=0.166 Sum_probs=114.2
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeC--CCCEEEEecCCCeEEEEECCCCeEEEeeccC---Cccc
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDA--PRQLIWCGSHDHNLYALDFRNYRCVYKLPCG---GSIF 674 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~---~~~~ 674 (900)
..+.++..+|.+.+||..||+.+-.|+..........+.. ....|++++.||+|.+||+++....-++... +..+
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 4588999999999999999988877765443322222222 4567899999999999999876544333332 2233
Q ss_pred cCceeeccCCEEEEEeC----CCcEEEEEcCCCCcee-eeEe-ecCCcceeeeeeeeC-CCEEEEEeecCcEEEECCCCC
Q 002615 675 GSPAIDEVHDVLYVAST----SGRLTAISVKALPFHT-LWLH-ELEVPAFASLCITSA-NRHVICCLVDGHVVALDSSGS 747 (900)
Q Consensus 675 ~~~~~~~~~~~l~v~t~----~g~l~~~~~~~~~g~~-~w~~-~~~~~~~~s~~~~~~-~~~i~~~~~~g~v~~~d~~G~ 747 (900)
.+....-.++.+..||. +-.++.||.+. -++ +-.+ +.+........+.+. .+.+..|+.||.+.+||.++.
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~--~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRS--EQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEecc--ccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 33333223456666663 45678888775 222 1111 122233344445444 568889999999999993222
Q ss_pred -----EEeeecCCCceeccccccccCCC--eEEEEeeCCeEEEEeCCCCce
Q 002615 748 -----IIWRCRTGGPIFAGPCTSFALPS--QVLICSRNGSIYSFEQESGNL 791 (900)
Q Consensus 748 -----~~w~~~~~~~~~~~~~~~~~~~~--~l~~g~~dg~l~~~d~~tG~~ 791 (900)
++..+..+..+.. +....++ .||+-++.+..+.|+.+.|..
T Consensus 199 ~EeDaL~~viN~~sSI~~---igw~~~~ykrI~clTH~Etf~~~ele~~~~ 246 (376)
T KOG1188|consen 199 NEEDALLHVINHGSSIHL---IGWLSKKYKRIMCLTHMETFAIYELEDGSE 246 (376)
T ss_pred cchhhHHHhhcccceeee---eeeecCCcceEEEEEccCceeEEEccCCCh
Confidence 1122222222211 1222233 799999999999999988874
No 263
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.70 E-value=4.4e-05 Score=73.42 Aligned_cols=262 Identities=11% Similarity=0.157 Sum_probs=157.0
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEe-----cCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEE--EecCC-c
Q 002615 559 YLFVGSHSHKFICADAKRSSVLWEIK-----LEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWT--FQTCG-E 630 (900)
Q Consensus 559 ~v~igs~~g~l~~~d~~tG~~~w~~~-----~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~--~~~~~-~ 630 (900)
.++.++.|..|..|+...+.- |... .+.+...++..++.+.++.++++|.++..|...+|+..-. .+.+. +
T Consensus 29 ilAscg~Dk~vriw~~~~~~s-~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnE 107 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDS-WTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENE 107 (312)
T ss_pred EEEeecCCceEEEEecCCCCc-EEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccc
Confidence 467788889999999875332 5433 2345556788999999999999999999998777765443 33333 4
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCe---EEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcC-CCCce
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR---CVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVK-ALPFH 706 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~---~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~-~~~g~ 706 (900)
+++ .++..++++|.+++.|..++.|....+. +.-..+.+..-.-..+..+..+.|+.++.+..+..|.-. ..+-.
T Consensus 108 VK~-Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~ 186 (312)
T KOG0645|consen 108 VKC-VAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWE 186 (312)
T ss_pred eeE-EEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCee
Confidence 554 4677788999999999999999766433 222222221111112233345788899999999888755 21222
Q ss_pred eeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEe
Q 002615 707 TLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFE 785 (900)
Q Consensus 707 ~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d 785 (900)
...++..+....-+..+...+.++.+++.|+.+..+. .++ |......+++..| -. ++.|..++.|+.+..|.
T Consensus 187 c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~---W~-~~~IaS~ggD~~i~lf~ 259 (312)
T KOG0645|consen 187 CVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVP---WD-NGVIASGGGDDAIRLFK 259 (312)
T ss_pred EEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC---cchhcccceEeee---ec-ccceEeccCCCEEEEEE
Confidence 3333333333333444455566788888777766654 211 1111123334343 22 56788888888888876
Q ss_pred CCCC--ceeeEEe-----cCC-ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEee
Q 002615 786 QESG--NLLWEYS-----VGD-PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVN 840 (900)
Q Consensus 786 ~~tG--~~~w~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~ 840 (900)
..++ ...|..- .+. .+.+.... ....+++..|++||.+.+|...
T Consensus 260 ~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~-----------p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 260 ESDSPDEPSWNLLAKKEGAHEVDVNSVQWN-----------PKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ecCCCCCchHHHHHhhhcccccccceEEEc-----------CCCCCceeecCCCceEEEEEec
Confidence 5432 1233211 111 11111111 1126789999999999998653
No 264
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.68 E-value=8.8e-05 Score=75.89 Aligned_cols=259 Identities=14% Similarity=0.137 Sum_probs=163.8
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee----------CCEEEEEECCCCcEEEEEecCCcee----
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY----------KGKIYFLDYLTGDIYWTFQTCGEVK---- 632 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~----------dg~l~~~d~~tG~~~w~~~~~~~~~---- 632 (900)
++++.+|.++|+.+-....+-. ....++++++.+|+.+. .-.|-.||.+|-++.+.+.++....
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~--~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFL--GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESS--EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeecccC--CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 5899999999999887766543 24678899999997532 2358899999999999887765311
Q ss_pred ---eeeeEeCCCCEEEEe--cCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCcee
Q 002615 633 ---CQPVVDAPRQLIWCG--SHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHT 707 (900)
Q Consensus 633 ---~~~~~~~~~~~i~~g--s~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~ 707 (900)
....+..++..+|+- +-...|-.+|.+.++.+-.+...|....-|.- ++..+.-+.||.+..+.++. .|+.
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~---~~~F~~lC~DGsl~~v~Ld~-~Gk~ 170 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSG---NRGFSMLCGDGSLLTVTLDA-DGKE 170 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEE---TTEEEEEETTSCEEEEEETS-TSSE
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecC---CCceEEEecCCceEEEEECC-CCCE
Confidence 122344556666663 33456888999999999888888765554432 35677778899999998884 3776
Q ss_pred eeEee-----cCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE----eeecC-----CCceeccc--cccccCCC
Q 002615 708 LWLHE-----LEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII----WRCRT-----GGPIFAGP--CTSFALPS 770 (900)
Q Consensus 708 ~w~~~-----~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~----w~~~~-----~~~~~~~~--~~~~~~~~ 770 (900)
.-+.. ...+.|..+.....++.++.-+++|.++..| ...... |..-. .+.--..- .......+
T Consensus 171 ~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~ 250 (342)
T PF06433_consen 171 AQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASG 250 (342)
T ss_dssp EEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTT
T ss_pred eEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccC
Confidence 53221 1223445555555677888889999999999 444332 43321 01000000 00122456
Q ss_pred eEEEEeeCC----------eEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEE-cCCCcEEEEEe
Q 002615 771 QVLICSRNG----------SIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCIC-TSSGSIHILRV 839 (900)
Q Consensus 771 ~l~~g~~dg----------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~G~v~~~d~ 839 (900)
.+|+--+.| .|+.||.++++.+-++++..++.+.....+ ...++|.. ..+|.|+++|.
T Consensus 251 rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd-----------~~P~L~~~~~~~~~l~v~D~ 319 (342)
T PF06433_consen 251 RLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQD-----------DKPLLYALSAGDGTLDVYDA 319 (342)
T ss_dssp EEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESS-----------SS-EEEEEETTTTEEEEEET
T ss_pred eEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccC-----------CCcEEEEEcCCCCeEEEEeC
Confidence 788765433 589999999998887776655433222211 25567654 45789999999
Q ss_pred ecC
Q 002615 840 NLD 842 (900)
Q Consensus 840 ~~~ 842 (900)
.+|
T Consensus 320 ~tG 322 (342)
T PF06433_consen 320 ATG 322 (342)
T ss_dssp TT-
T ss_pred cCC
Confidence 987
No 265
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=98.68 E-value=1e-06 Score=89.56 Aligned_cols=227 Identities=14% Similarity=0.145 Sum_probs=143.9
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFAS 720 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s 720 (900)
...+.+|..|..+.++|..+++.+-.++.+..-.......++...+..++.+-.++.|.....+ ..-....+......
T Consensus 231 ~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s--~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 231 SSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS--EPTSSRPHEEPVTG 308 (506)
T ss_pred CCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc--Ccccccccccccee
Confidence 3568888888899999988877776665544444444455555678888888888888765422 11112222222234
Q ss_pred eeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCc-e-eccccccccCCCeEE-EEeeCCeEEEEeCCCCceeeEEe
Q 002615 721 LCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGP-I-FAGPCTSFALPSQVL-ICSRNGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 721 ~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-~-~~~~~~~~~~~~~l~-~g~~dg~l~~~d~~tG~~~w~~~ 796 (900)
....+.+++++.++.++.....| .+|..+-....... + +.+. .+-.||.|+ .|+.||.|..||.+++.-.-+|.
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~--~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSA--AFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEe--eEcCCceEEeccCCCceEEEEEcCCccccccCC
Confidence 44556788999888888777777 88988766554321 1 1221 233355554 45789999999999988777777
Q ss_pred cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCc-cccCcee--
Q 002615 797 VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGD-IFSSPVM-- 873 (900)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ss~~~-- 873 (900)
.+...+....+.++ |-+++++++||.|.+||.+.- +.+..+.++.. -..+..+
T Consensus 387 ght~~vk~i~FsEN-----------GY~Lat~add~~V~lwDLRKl-------------~n~kt~~l~~~~~v~s~~fD~ 442 (506)
T KOG0289|consen 387 GHTGPVKAISFSEN-----------GYWLATAADDGSVKLWDLRKL-------------KNFKTIQLDEKKEVNSLSFDQ 442 (506)
T ss_pred CCCCceeEEEeccC-----------ceEEEEEecCCeEEEEEehhh-------------cccceeeccccccceeEEEcC
Confidence 66555555444443 778888999999999999854 23333333321 1122222
Q ss_pred eCCEEEEeeeCCeEEEEEcccc
Q 002615 874 IGGRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 874 ~~~~l~vg~~dg~l~~ld~~tg 895 (900)
.+.+|.+++.+=++|.++..+.
T Consensus 443 SGt~L~~~g~~l~Vy~~~k~~k 464 (506)
T KOG0289|consen 443 SGTYLGIAGSDLQVYICKKKTK 464 (506)
T ss_pred CCCeEEeecceeEEEEEecccc
Confidence 3567777777777777775443
No 266
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=98.67 E-value=1.6e-07 Score=94.71 Aligned_cols=230 Identities=14% Similarity=0.061 Sum_probs=148.3
Q ss_pred eEecCCCEEEEEeeCCEEEEEECCCCcE--EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 594 AVLADFSQVVVGCYKGKIYFLDYLTGDI--YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 594 ~~~~~~~~i~vg~~dg~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
.+..+.+.+..|..|..|..|+...++. .-+...........-++.++..++..++|+.+..||...++...++..+.
T Consensus 182 ~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHt 261 (459)
T KOG0288|consen 182 EFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHT 261 (459)
T ss_pred EEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccc
Confidence 3444446788888888888888554441 11111112223444566667788889999999999999888777666554
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEe
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIW 750 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w 750 (900)
.-..+.-+......++.|+.+..+..||+.. +...-++-.... ...+......++.|-.|+.|..|| .++....
T Consensus 262 dkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k--~~C~kt~l~~S~---cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~ 336 (459)
T KOG0288|consen 262 DKVTAAKFKLSHSRVVSGSADRTIKLWDLQK--AYCSKTVLPGSQ---CNDIVCSISDVISGHFDKKVRFWDIRSADKTR 336 (459)
T ss_pred cceeeehhhccccceeeccccchhhhhhhhh--hheecccccccc---ccceEecceeeeecccccceEEEeccCCceee
Confidence 4333333332234478888888888888775 333222211111 111222233556666789999999 8888888
Q ss_pred eecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCC-----ceecccccccccccccccccCCCeEE
Q 002615 751 RCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGD-----PITASAYIDEHLQLKLESCLSIDRLV 825 (900)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 825 (900)
..+.++.+.+... ......|...+.|..+..+|..+-++.-.+...+ +.....| .+.+.++
T Consensus 337 sv~~gg~vtSl~l--s~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf------------Spd~~Yv 402 (459)
T KOG0288|consen 337 SVPLGGRVTSLDL--SMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF------------SPDGSYV 402 (459)
T ss_pred EeecCcceeeEee--ccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE------------CCCCcee
Confidence 8887776655442 2234468888999999999998887776654433 2211111 2348899
Q ss_pred EEEcCCCcEEEEEeecC
Q 002615 826 CICTSSGSIHILRVNLD 842 (900)
Q Consensus 826 ~~g~~~G~v~~~d~~~~ 842 (900)
.+|+.||.||+|+..++
T Consensus 403 aAGS~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 403 AAGSADGSVYIWSVFTG 419 (459)
T ss_pred eeccCCCcEEEEEccCc
Confidence 99999999999999987
No 267
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.65 E-value=2.9e-06 Score=88.23 Aligned_cols=283 Identities=14% Similarity=0.112 Sum_probs=155.7
Q ss_pred EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEE-EEe----cCCceeeeeeEeCCCCEEEEecCCCeEEEEE
Q 002615 583 IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYW-TFQ----TCGEVKCQPVVDAPRQLIWCGSHDHNLYALD 657 (900)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w-~~~----~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d 657 (900)
+..+..+.++..+.+.|..++.|++|..+.+||...-.... .|. ......-+..+...++.|++.+.......||
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D 242 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD 242 (641)
T ss_pred ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence 45566677778888999999999999999999965322111 111 1222333444555677788877777788888
Q ss_pred CCCCeEEEeeccC-----------Cc--cccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC--C---cce
Q 002615 658 FRNYRCVYKLPCG-----------GS--IFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTLWLHELE--V---PAF 718 (900)
Q Consensus 658 ~~~g~~~w~~~~~-----------~~--~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~--~---~~~ 718 (900)
. +|..+-.+.-+ |. ...+-+..+ +.+.++.++.+|.+..||.++. .+++.-++.. . -..
T Consensus 243 R-dG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~-k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 243 R-DGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNT-KSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred c-CCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCc-hhheeEEeeccCCCcccCc
Confidence 4 44433222111 11 111222222 2356777889999999998862 2222222211 1 112
Q ss_pred eeeeeeeCCCEEEEEeecCcEEEEC-CCC--CEEeeecCC-CceeccccccccCC-CeEEEEeeCCeEEEEeCCCCce-e
Q 002615 719 ASLCITSANRHVICCLVDGHVVALD-SSG--SIIWRCRTG-GPIFAGPCTSFALP-SQVLICSRNGSIYSFEQESGNL-L 792 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~g~v~~~d-~~G--~~~w~~~~~-~~~~~~~~~~~~~~-~~l~~g~~dg~l~~~d~~tG~~-~ 792 (900)
.++.+..++..|..|+.||.|..|+ .+- .....+... .+-....|+.+..+ +.|..-+.|+.+..||...-+. +
T Consensus 321 tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 321 TSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPL 400 (641)
T ss_pred eeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccch
Confidence 4555666777888888999999998 321 222222211 11111222333334 4555667899999999875432 2
Q ss_pred e-EEecCCceecccccccccccccccccCCCeEEEEEc------CCCcEEEEEeecCcccccccccccceeeeeeeccCC
Q 002615 793 W-EYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICT------SSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQG 865 (900)
Q Consensus 793 w-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~ 865 (900)
. ...+......+-+. ..+.+.+|+.|+ ..|.|++||..+- +.+......+
T Consensus 401 ~~~tgL~t~~~~tdc~----------FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~-------------d~v~ki~i~~ 457 (641)
T KOG0772|consen 401 NVRTGLPTPFPGTDCC----------FSPDDKLILTGTSAPNGMTAGTLFFFDRMTL-------------DTVYKIDIST 457 (641)
T ss_pred hhhcCCCccCCCCccc----------cCCCceEEEecccccCCCCCceEEEEeccce-------------eeEEEecCCC
Confidence 1 11222221111111 122366777765 3577999988642 3333333332
Q ss_pred ccccCceee--CCEEEEeeeCCeEEEE
Q 002615 866 DIFSSPVMI--GGRVFVGCRDDYIYCI 890 (900)
Q Consensus 866 ~~~ss~~~~--~~~l~vg~~dg~l~~l 890 (900)
..+.....+ =+.|++||.||++|+|
T Consensus 458 aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 458 ASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred ceEEEEeecchhhheeeecCCCceEEE
Confidence 211111111 2789999999999987
No 268
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.65 E-value=5.1e-06 Score=86.44 Aligned_cols=275 Identities=12% Similarity=0.077 Sum_probs=165.7
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEE-----EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWE-----IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~-----~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~ 627 (900)
+...+-+++.|+.|-.|.+||...-.-... .+.......+..++..++.|++.+.......|| .+|..+-.+..
T Consensus 175 ~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D-RdG~~~~e~~K 253 (641)
T KOG0772|consen 175 VDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD-RDGFEIVEFSK 253 (641)
T ss_pred ecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc-cCCceeeeeec
Confidence 344577999999999999999763221111 112223344667778888888888777788888 77876655443
Q ss_pred CCce-------------eeeeeEeC-CCCEEEEecCCCeEEEEECCCCe---EEEeeccC-C-c-cccCceeeccCCEEE
Q 002615 628 CGEV-------------KCQPVVDA-PRQLIWCGSHDHNLYALDFRNYR---CVYKLPCG-G-S-IFGSPAIDEVHDVLY 687 (900)
Q Consensus 628 ~~~~-------------~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~---~~w~~~~~-~-~-~~~~~~~~~~~~~l~ 687 (900)
++.. ..+..+.+ .++.++++++||++..||..+-+ .+.+.... + . ...++..+.++..|.
T Consensus 254 GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iA 333 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIA 333 (641)
T ss_pred cchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhh
Confidence 3221 12223333 35667888999999999987643 22222222 2 1 234455666566677
Q ss_pred EEeCCCcEEEEEcCCCCceeeeEe-ecCCc--ceeeeeeeeCCCEEEEEeecCcEEEEC-CC-CCEEeeecC-CCceecc
Q 002615 688 VASTSGRLTAISVKALPFHTLWLH-ELEVP--AFASLCITSANRHVICCLVDGHVVALD-SS-GSIIWRCRT-GGPIFAG 761 (900)
Q Consensus 688 v~t~~g~l~~~~~~~~~g~~~w~~-~~~~~--~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~-G~~~w~~~~-~~~~~~~ 761 (900)
.|..+|.|..|+.....-.+...+ +.+.+ .+.+..++.+++++..-+.|+.+-+|| .+ .+.+..... ..+.-..
T Consensus 334 agc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~t 413 (641)
T KOG0772|consen 334 AGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGT 413 (641)
T ss_pred hcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCC
Confidence 788899999999643222222222 22222 456777777888888888899999998 43 333322211 1111122
Q ss_pred ccccccCCCeEEEEee------CCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEE
Q 002615 762 PCTSFALPSQVLICSR------NGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIH 835 (900)
Q Consensus 762 ~~~~~~~~~~l~~g~~------dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~ 835 (900)
.|...-.+..|+.|+. .|.|+.||..+-..+.++.+...-+...... +.=+.|++|+.||.++
T Consensus 414 dc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Wh-----------pkLNQi~~gsgdG~~~ 482 (641)
T KOG0772|consen 414 DCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWH-----------PKLNQIFAGSGDGTAH 482 (641)
T ss_pred ccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeec-----------chhhheeeecCCCceE
Confidence 2332223445666642 4689999999888888776653322221122 2246789999999998
Q ss_pred EEEe
Q 002615 836 ILRV 839 (900)
Q Consensus 836 ~~d~ 839 (900)
+|--
T Consensus 483 vyYd 486 (641)
T KOG0772|consen 483 VYYD 486 (641)
T ss_pred EEEC
Confidence 8743
No 269
>KOG4328 consensus WD40 protein [Function unknown]
Probab=98.65 E-value=2.5e-06 Score=87.55 Aligned_cols=273 Identities=15% Similarity=0.079 Sum_probs=160.7
Q ss_pred eEEEEecCCCeEEEEECCCCcEE----EEEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEEEEec--CCc
Q 002615 558 IYLFVGSHSHKFICADAKRSSVL----WEIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYWTFQT--CGE 630 (900)
Q Consensus 558 ~~v~igs~~g~l~~~d~~tG~~~----w~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~--~~~ 630 (900)
..|.+|...|.|-.||..+.+.. ..+..+....++..+.+ +...||..+|||+|.+-|.+++...-.+.. ...
T Consensus 201 ~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~ 280 (498)
T KOG4328|consen 201 KLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNI 280 (498)
T ss_pred eEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccce
Confidence 67888999999999998522111 11222222233444444 345799999999999999887754222222 333
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE-EEeeccCCccccCceeeccC-CEEEEEeCCCcEEEEEcCCCCceee
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC-VYKLPCGGSIFGSPAIDEVH-DVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~-~w~~~~~~~~~~~~~~~~~~-~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
..+..-+..+++.+++|.+-|.+..||..+++. .|....+..-+.+..+.+.. ..+..++.++....||+....++.-
T Consensus 281 ~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s 360 (498)
T KOG4328|consen 281 WFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS 360 (498)
T ss_pred eeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC
Confidence 334444455667788887778899999887544 67666655444444444322 4567778899999999876434431
Q ss_pred --eEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCC---------CCEEeeecCCCceeccccccccCCCeEEEEee
Q 002615 709 --WLHELEVPAFASLCITSANRHVICCLVDGHVVALDSS---------GSIIWRCRTGGPIFAGPCTSFALPSQVLICSR 777 (900)
Q Consensus 709 --w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~---------G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~ 777 (900)
-..-.+.....+..+++.++.+++.+.|..|.+||.+ +.+......+..+.-.-+...-..+.|++|.+
T Consensus 361 p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~ 440 (498)
T KOG4328|consen 361 PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY 440 (498)
T ss_pred cceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEecc
Confidence 2222333444677788889998888899999999831 11111111111111000111113567888888
Q ss_pred CCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCe-EEEEEcCCCcEEEEEe
Q 002615 778 NGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDR-LVCICTSSGSIHILRV 839 (900)
Q Consensus 778 dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~G~v~~~d~ 839 (900)
-..|-+||.+.|+.+-++..+.. .+.+.+. .+.+-+. ++.-++..|.||+|--
T Consensus 441 ~r~IDv~~~~~~q~v~el~~P~~-~tI~~vn--------~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 441 PRPIDVFDGNGGQMVCELHDPES-STIPSVN--------EFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred CcceeEEcCCCCEEeeeccCccc-cccccce--------eecccccceeccCCccceEEEEec
Confidence 88899999888876655322221 1112111 1222244 5555566788888843
No 270
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.64 E-value=2.7e-06 Score=80.64 Aligned_cols=274 Identities=15% Similarity=0.098 Sum_probs=156.9
Q ss_pred cccccceEEeeCCceEEEEecC-------CCeEEEEECCCCcEE---EEEecCCceeeceeEec-CCCEEEEEeeCCEEE
Q 002615 544 CVDASPLVVLKDSDIYLFVGSH-------SHKFICADAKRSSVL---WEIKLEGRIECSAAVLA-DFSQVVVGCYKGKIY 612 (900)
Q Consensus 544 ~v~~sp~v~~~~~~~~v~igs~-------~g~l~~~d~~tG~~~---w~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~ 612 (900)
.+..||.+ .+++.+++. .|+|+.++...++-+ -.+...+... .++.+. ..+.+++.+.||.|.
T Consensus 13 svqfSPf~-----~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~Lf-dV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 13 SVQFSPFV-----ENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLF-DVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred eeEecccc-----cchhheeehhhcccccCceEEEEecCCCCCeEEEEeeeccccee-EeeecCCCcceEEEEecCceEE
Confidence 35556765 444444432 367888887543322 2344444432 233333 345788889999999
Q ss_pred EEECCC-CcEEEEEecC-CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec-cCCEEEEE
Q 002615 613 FLDYLT-GDIYWTFQTC-GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE-VHDVLYVA 689 (900)
Q Consensus 613 ~~d~~t-G~~~w~~~~~-~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~-~~~~l~v~ 689 (900)
.||..- -.++-.++-+ .++.+.---...+..++++|+|++|..|++.-++-+.++..+...+......+ ..+.+..+
T Consensus 87 l~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~ 166 (311)
T KOG0277|consen 87 LFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASA 166 (311)
T ss_pred EeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEc
Confidence 999322 1223233322 23333211111345677889999999999998888877766554333333322 23556667
Q ss_pred eCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeee-CCCEEEEEeecCcEEEEC-CC-CCEEeeecCCCc----eeccc
Q 002615 690 STSGRLTAISVKALPFHTLWLHELEVPAFASLCITS-ANRHVICCLVDGHVVALD-SS-GSIIWRCRTGGP----IFAGP 762 (900)
Q Consensus 690 t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~-~~~~i~~~~~~g~v~~~d-~~-G~~~w~~~~~~~----~~~~~ 762 (900)
+.+|.+..||.+. .|+.+- +..+.....+..... +...++.|+.|+.|+++| .+ ..++..+...+- +..+|
T Consensus 167 Sgd~~l~lwdvr~-~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sp 244 (311)
T KOG0277|consen 167 SGDGTLRLWDVRS-PGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSP 244 (311)
T ss_pred cCCceEEEEEecC-CCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCc
Confidence 7899999999885 366554 444432222222322 345677888999999999 43 234444422211 12222
Q ss_pred cccccCCCeEEEEeeCCeEEEEeCCCCc-eeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 763 CTSFALPSQVLICSRNGSIYSFEQESGN-LLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 763 ~~~~~~~~~l~~g~~dg~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
.....|..+++|=++..||.+.+. .+-+++.+...+...-.. ....+.++.++-|+.+++|++
T Consensus 245 ----h~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws----------~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 245 ----HHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWS----------LFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ----chhhHhhhccccceEEecccccchhhhhhhhccceEEeccccc----------cccCceeeecccccceeeecc
Confidence 112346677889999999987543 233334333332221110 113788999999999999975
No 271
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=98.61 E-value=8.1e-06 Score=91.08 Aligned_cols=228 Identities=11% Similarity=0.046 Sum_probs=155.5
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEE-Ee-cCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcE---EEEEec
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWE-IK-LEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDI---YWTFQT 627 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~-~~-~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~---~w~~~~ 627 (900)
...++.+|++.+.+|.|..|+..+-...-+ .. .+..+ ..+....+.+.+|+.++++.+|...+|+. +-+|..
T Consensus 21 ~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v---~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftl 97 (933)
T KOG1274|consen 21 YDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELV---SSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTL 97 (933)
T ss_pred EcCCCCEEEEecCCCceEEeecCCcccCCchhhccCcee---EEEeecccceEEeeccceEEEeeCCCCCccceeeeeec
Confidence 444566888888899999998765532222 11 12222 23334445789999999999998877753 455554
Q ss_pred CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCcee
Q 002615 628 CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHT 707 (900)
Q Consensus 628 ~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~ 707 (900)
+-. ..++..++..+..|+.|-.|.+++..+......+...........+++++..|.+.+.+|.|++|++.+ +..
T Consensus 98 p~r---~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~--~~~ 172 (933)
T KOG1274|consen 98 PIR---DLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD--GIL 172 (933)
T ss_pred cce---EEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc--chh
Confidence 322 234566678899999999999999988877666666555566667777778889999999999999998 654
Q ss_pred eeEeecC--------CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceecccccccc-CCCeEEEEee
Q 002615 708 LWLHELE--------VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFA-LPSQVLICSR 777 (900)
Q Consensus 708 ~w~~~~~--------~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~ 777 (900)
......- ......++..++++.+.+...++.|..|+ .+++..+.+..........++... .+..|..++.
T Consensus 173 ~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~ 252 (933)
T KOG1274|consen 173 SKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTL 252 (933)
T ss_pred hhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeecc
Confidence 4333211 22234556778889998888999999999 777776666543221111111111 2456888889
Q ss_pred CCeEEEEeCCC
Q 002615 778 NGSIYSFEQES 788 (900)
Q Consensus 778 dg~l~~~d~~t 788 (900)
+|.|.+||.++
T Consensus 253 ~g~I~vWnv~t 263 (933)
T KOG1274|consen 253 DGQILVWNVDT 263 (933)
T ss_pred CCcEEEEeccc
Confidence 99999999885
No 272
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.61 E-value=8e-05 Score=80.30 Aligned_cols=265 Identities=11% Similarity=0.098 Sum_probs=145.3
Q ss_pred EEEEe-cCCCeEEEEECCC-Cc--EEEEEecCCceeeceeEecCCCEEEEEee-CCEEEEEECC-CCcEE--EEEecCCc
Q 002615 559 YLFVG-SHSHKFICADAKR-SS--VLWEIKLEGRIECSAAVLADFSQVVVGCY-KGKIYFLDYL-TGDIY--WTFQTCGE 630 (900)
Q Consensus 559 ~v~ig-s~~g~l~~~d~~t-G~--~~w~~~~~~~~~~~~~~~~~~~~i~vg~~-dg~l~~~d~~-tG~~~--w~~~~~~~ 630 (900)
++|++ ..++.|+.||..+ |+ ++-.....+. .....++++++.+|+++. ++.|+.|+.. +|++. -.....+
T Consensus 3 ~~y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~-~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~- 80 (330)
T PRK11028 3 IVYIASPESQQIHVWNLNHEGALTLLQVVDVPGQ-VQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPG- 80 (330)
T ss_pred EEEEEcCCCCCEEEEEECCCCceeeeeEEecCCC-CccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCC-
Confidence 57777 4578899999864 54 3333333222 235677888889999865 6778878765 56542 1222222
Q ss_pred eeeeeeEeCCCCEEEEecC-CCeEEEEECCC-Ce---EEEeeccCCccccCceeeccCCEEEEEeC-CCcEEEEEcCCCC
Q 002615 631 VKCQPVVDAPRQLIWCGSH-DHNLYALDFRN-YR---CVYKLPCGGSIFGSPAIDEVHDVLYVAST-SGRLTAISVKALP 704 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~~-g~---~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~ 704 (900)
..+...++++++.+|++++ ++.+..|+.++ |. .+......... ....++++++.+|++.. ++.|..||+++ .
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~-~~~~~~p~g~~l~v~~~~~~~v~v~d~~~-~ 158 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGC-HSANIDPDNRTLWVPCLKEDRIRLFTLSD-D 158 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcc-cEeEeCCCCCEEEEeeCCCCEEEEEEECC-C
Confidence 2234556677788888764 67888898753 32 22211111111 12345665678888775 48899999875 2
Q ss_pred ceee------eEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC-C--CCCEEe--eecCC-----Cceecccccccc
Q 002615 705 FHTL------WLHELEVPAFASLCITSANRHVICCLV-DGHVVALD-S--SGSIIW--RCRTG-----GPIFAGPCTSFA 767 (900)
Q Consensus 705 g~~~------w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~--~G~~~w--~~~~~-----~~~~~~~~~~~~ 767 (900)
|... .....+.. .....+.+++.++|+.+. ++.+.+|+ . +|+... .+... ++..........
T Consensus 159 g~l~~~~~~~~~~~~g~~-p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p 237 (330)
T PRK11028 159 GHLVAQEPAEVTTVEGAG-PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP 237 (330)
T ss_pred CcccccCCCceecCCCCC-CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC
Confidence 3221 11111111 123456677888988876 78898888 4 454322 12110 010000011112
Q ss_pred CCCeEEEEee-CCeEEEEeCCC--Cceee--EEecCCceecccccccccccccccccCCCeEEEEEcC-CCcEEEEEee
Q 002615 768 LPSQVLICSR-NGSIYSFEQES--GNLLW--EYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTS-SGSIHILRVN 840 (900)
Q Consensus 768 ~~~~l~~g~~-dg~l~~~d~~t--G~~~w--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~G~v~~~d~~ 840 (900)
.+..+|++.. ++.|..|+.++ +.+.. ....+..... -....++.++|++.. ++.|.+|+.+
T Consensus 238 dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~------------~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 238 DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRG------------FNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCc------------eEECCCCCEEEEEEccCCcEEEEEEc
Confidence 3456888754 57788887643 22222 2222111100 112234788888775 8889999764
No 273
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.59 E-value=4.8e-05 Score=76.45 Aligned_cols=224 Identities=14% Similarity=0.156 Sum_probs=132.6
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC--CEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK--GKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d--g~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
+...|-+|+.+| ...|....-........++....-..++.. .+.+-+.+ ..+..++.+.+..+-.+..+..+.+
T Consensus 16 d~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~ 92 (391)
T KOG2110|consen 16 DSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILA 92 (391)
T ss_pred ceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCceEEEEecCCceEE
Confidence 345677788877 444543322211112222221122233322 33333222 2477778777777776666666554
Q ss_pred eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC-CccccCceeeccCCEEEEE----eCCCcEEEEEcCCCCceee
Q 002615 634 QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG-GSIFGSPAIDEVHDVLYVA----STSGRLTAISVKALPFHTL 708 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~-~~~~~~~~~~~~~~~l~v~----t~~g~l~~~~~~~~~g~~~ 708 (900)
.-. +.+.+++.-.+ .+|.||+++.+.+..+..- .......++..+.+.-|++ +..|.++.||..+ -+..
T Consensus 93 Vrm---Nr~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n--l~~v 166 (391)
T KOG2110|consen 93 VRM---NRKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN--LQPV 166 (391)
T ss_pred EEE---ccceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc--ceee
Confidence 322 34555555443 4999999999998876553 2233333333333322222 3578899999887 6777
Q ss_pred eEeecCCcceeeeeeeeCCCEEEEEeecCcEE-EEC-CCCCEEeeecCCCceeccccccccCCC-eEEEEeeCCeEEEEe
Q 002615 709 WLHELEVPAFASLCITSANRHVICCLVDGHVV-ALD-SSGSIIWRCRTGGPIFAGPCTSFALPS-QVLICSRNGSIYSFE 785 (900)
Q Consensus 709 w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~-~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~l~~~d 785 (900)
-....+.......++..++..+..++..|+|. +|. .+|+.++++..+........+.+..+. .|-+.+..++|++|.
T Consensus 167 ~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFK 246 (391)
T KOG2110|consen 167 NTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFK 246 (391)
T ss_pred eEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEE
Confidence 77778877778888888888999999888875 456 899999998866532222222233344 444556677888887
Q ss_pred CCC
Q 002615 786 QES 788 (900)
Q Consensus 786 ~~t 788 (900)
.++
T Consensus 247 L~~ 249 (391)
T KOG2110|consen 247 LEK 249 (391)
T ss_pred ecc
Confidence 654
No 274
>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []. The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....
Probab=98.58 E-value=1e-07 Score=74.96 Aligned_cols=59 Identities=25% Similarity=0.398 Sum_probs=51.5
Q ss_pred HHHHHHHhcccCC--cccccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHH
Q 002615 363 QVIRKAFGHALMV--EEVLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIAL 421 (900)
Q Consensus 363 ~~~~~~~~~~l~~--~~i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l 421 (900)
+.++++|+++++. .+++.+++||++|+|||.+++++..+ .+++..++++||+..|+++|
T Consensus 1 e~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 1 EQLREIIAEVLGVDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp HHHHHHHHHHHTSSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred CHHHHHHHHHHCcCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 4678889999986 57999999999999999999998654 47888999999999999875
No 275
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=98.57 E-value=6e-06 Score=92.10 Aligned_cols=234 Identities=11% Similarity=0.067 Sum_probs=154.7
Q ss_pred eeceeEecCCCEEEEEeeCCEEEEEECCCCc-EEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe---EEE
Q 002615 590 ECSAAVLADFSQVVVGCYKGKIYFLDYLTGD-IYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR---CVY 665 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~---~~w 665 (900)
.+..++.++|.+|++.+.||.+..|+..+-. .--.....+....+... ..+.+.+|+.++.+.+|...+++ .+-
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~~~~~iL~ 93 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSGEEDTILA 93 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee--cccceEEeeccceEEEeeCCCCCccceee
Confidence 4577889999999999999999999854431 11112212222222222 34678899999999888776653 333
Q ss_pred eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C
Q 002615 666 KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S 744 (900)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~ 744 (900)
++.+. ....++..++..+.+|+.+-.|.+++..+ +........+........+.+.+..+.+.+.+|.|++|+ .
T Consensus 94 Rftlp---~r~~~v~g~g~~iaagsdD~~vK~~~~~D--~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 94 RFTLP---IRDLAVSGSGKMIAAGSDDTAVKLLNLDD--SSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred eeecc---ceEEEEecCCcEEEeecCceeEEEEeccc--cchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 44332 22345666567888899998899999887 555554444444445666777788888899999999999 8
Q ss_pred CCCEEeeecC----CCceeccccc---cccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCc--eeccccccccccccc
Q 002615 745 SGSIIWRCRT----GGPIFAGPCT---SFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDP--ITASAYIDEHLQLKL 815 (900)
Q Consensus 745 ~G~~~w~~~~----~~~~~~~~~~---~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~--~~~~~~~~~~~~~~~ 815 (900)
+|.+....+. .+.+.+..|. ..-.++.+.+...++.|..|+.++.+....+..... .++...
T Consensus 169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~--------- 239 (933)
T KOG1274|consen 169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQ--------- 239 (933)
T ss_pred cchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEE---------
Confidence 8877644331 1112122221 122457888888899999999998888776643321 111111
Q ss_pred ccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 816 ESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 816 ~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
..+.|.+|++++.+|.|.+||.++
T Consensus 240 --wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 240 --WSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred --EcCCCcEEeeeccCCcEEEEeccc
Confidence 233489999999999999999985
No 276
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=98.56 E-value=1.8e-05 Score=74.70 Aligned_cols=190 Identities=15% Similarity=0.162 Sum_probs=116.1
Q ss_pred ceEEEEecCCCeEEEEECC------CCcEEEEEecCCce-------eeceeEecCCCEEEEEeeCCEEEEEECCCCcEEE
Q 002615 557 DIYLFVGSHSHKFICADAK------RSSVLWEIKLEGRI-------ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYW 623 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~------tG~~~w~~~~~~~~-------~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w 623 (900)
+..+.++. +|.|+.|--. --+.+|+...+.+. ..+..+.+..+-|+....|+.+|++|.++|++.-
T Consensus 72 d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r 150 (325)
T KOG0649|consen 72 DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQR 150 (325)
T ss_pred hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEE
Confidence 45555554 5889888532 23567876544322 2244455454555555589999999999999999
Q ss_pred EEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC------ccccC--ceeeccCCEEEEEeCCCcE
Q 002615 624 TFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG------SIFGS--PAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~------~~~~~--~~~~~~~~~l~v~t~~g~l 695 (900)
.+..+....-+.+.-...+.|+.|+.||++..||.++++++..+.... +-++. .++..+.+.+++|. .-.+
T Consensus 151 ~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~l 229 (325)
T KOG0649|consen 151 EYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKL 229 (325)
T ss_pred EEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCce
Confidence 888877666665554557889999999999999999999887654321 11111 33444345555554 3457
Q ss_pred EEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeec
Q 002615 696 TAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCR 753 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~ 753 (900)
..|++.. .+..-.+..+.+.. .+...++.+++++....+..|.-+|.+.-..+
T Consensus 230 slwhLrs--se~t~vfpipa~v~---~v~F~~d~vl~~G~g~~v~~~~l~Gvl~a~ip 282 (325)
T KOG0649|consen 230 SLWHLRS--SESTCVFPIPARVH---LVDFVDDCVLIGGEGNHVQSYTLNGVLQANIP 282 (325)
T ss_pred eEEeccC--CCceEEEeccccee---EeeeecceEEEeccccceeeeeeccEEEEecc
Confidence 7777776 33333333332221 12234567777765555655554565544333
No 277
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=98.54 E-value=1.1e-05 Score=76.05 Aligned_cols=167 Identities=14% Similarity=0.154 Sum_probs=110.6
Q ss_pred ccccccccccccccccccceEE-----eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE
Q 002615 531 GFIQELWKVHMESCVDASPLVV-----LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG 605 (900)
Q Consensus 531 ~~~~~~W~~~~~~~v~~sp~v~-----~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg 605 (900)
..++.+|+......+++.++-- .....+.|+.+..|+.+|++|+.+|++...++.+.....+.+.-...+.|+.|
T Consensus 95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG 174 (325)
T KOG0649|consen 95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSG 174 (325)
T ss_pred ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeec
Confidence 3566788888777776654321 22245555555589999999999999999999887655454443455689999
Q ss_pred eeCCEEEEEECCCCcEEEEEecCC--------ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCc
Q 002615 606 CYKGKIYFLDYLTGDIYWTFQTCG--------EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSP 677 (900)
Q Consensus 606 ~~dg~l~~~d~~tG~~~w~~~~~~--------~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~ 677 (900)
+.||++..||.+|++....+..-. ..+...+++.+..-+++|. ...+..|++...++...+.....+.-..
T Consensus 175 ~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vfpipa~v~~v~ 253 (325)
T KOG0649|consen 175 AEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVFPIPARVHLVD 253 (325)
T ss_pred CCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEEeccCCCceEEEecccceeEee
Confidence 999999999999998876543311 1111123344456677765 4468888888888777776655543322
Q ss_pred eeeccCCEEEEEeCCCcEEEEEcC
Q 002615 678 AIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 678 ~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
.. ++.++++.....+..|.++
T Consensus 254 F~---~d~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 254 FV---DDCVLIGGEGNHVQSYTLN 274 (325)
T ss_pred ee---cceEEEeccccceeeeeec
Confidence 22 2566666655566666544
No 278
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=98.53 E-value=5.2e-06 Score=88.77 Aligned_cols=280 Identities=13% Similarity=0.128 Sum_probs=158.1
Q ss_pred EEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECC
Q 002615 580 LWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFR 659 (900)
Q Consensus 580 ~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~ 659 (900)
.|+......+ ...++.+||..+++.. +..++.||+.+|.++.+.+.+...+.+.+++.++.....|+.|..+..|+.+
T Consensus 6 ~~r~~~~hci-~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 6 TWRDKAEHCI-NDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred hhhcccccch-heeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 4554443333 2568889998888775 5579999999999998888777666666777677777788999999999866
Q ss_pred CCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcE
Q 002615 660 NYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHV 739 (900)
Q Consensus 660 ~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v 739 (900)
--..+ ++..+ ..+.++.+.+-...+..++.+. .-.|+++. +.+-+++.... ..+.....++.++.+|-.+|+|
T Consensus 84 lEG~L-kYSH~-D~IQCMsFNP~~h~LasCsLsd-FglWS~~q---K~V~K~kss~R-~~~CsWtnDGqylalG~~nGTI 156 (1081)
T KOG1538|consen 84 LEGIL-KYSHN-DAIQCMSFNPITHQLASCSLSD-FGLWSPEQ---KSVSKHKSSSR-IICCSWTNDGQYLALGMFNGTI 156 (1081)
T ss_pred cccee-eeccC-CeeeEeecCchHHHhhhcchhh-ccccChhh---hhHHhhhhhee-EEEeeecCCCcEEEEeccCceE
Confidence 42222 22222 2222223333233444443322 23343332 11111111111 1334455567778888889998
Q ss_pred EEECCCCCEEeeecC----CCceecccccc---ccCCCeEEEEeeCCeEEEEeCCCCceeeEE-ecCCceeccccccccc
Q 002615 740 VALDSSGSIIWRCRT----GGPIFAGPCTS---FALPSQVLICSRNGSIYSFEQESGNLLWEY-SVGDPITASAYIDEHL 811 (900)
Q Consensus 740 ~~~d~~G~~~w~~~~----~~~~~~~~~~~---~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~~~~ 811 (900)
..-+.+|+..-.+.. +.++++..+.+ ...++.+-+...+.++..+.. +|+.+-+- .++-......++
T Consensus 157 siRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L-sG~~Igk~r~L~FdP~CisYf---- 231 (1081)
T KOG1538|consen 157 SIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL-SGKQIGKDRALNFDPCCISYF---- 231 (1081)
T ss_pred EeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe-cceeecccccCCCCchhheec----
Confidence 888877776544443 23455443322 223455666666777766664 46665421 122122111122
Q ss_pred ccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEE
Q 002615 812 QLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYC 889 (900)
Q Consensus 812 ~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ 889 (900)
..+.++.+|+.+|.+.+|-.+.= .+-+.-+...=+++ ..+ .+..+.+||.||++-|
T Consensus 232 --------~NGEy~LiGGsdk~L~~fTR~Gv-------------rLGTvg~~D~WIWt-V~~~PNsQ~v~~GCqDGTiAC 289 (1081)
T KOG1538|consen 232 --------TNGEYILLGGSDKQLSLFTRDGV-------------RLGTVGEQDSWIWT-VQAKPNSQYVVVGCQDGTIAC 289 (1081)
T ss_pred --------cCCcEEEEccCCCceEEEeecCe-------------EEeeccccceeEEE-EEEccCCceEEEEEccCeeeh
Confidence 23889999999999999865421 11000010000111 111 3457889999999999
Q ss_pred EEcccc
Q 002615 890 IALETQ 895 (900)
Q Consensus 890 ld~~tg 895 (900)
|++...
T Consensus 290 yNl~fS 295 (1081)
T KOG1538|consen 290 YNLIFS 295 (1081)
T ss_pred hhhHHh
Confidence 997543
No 279
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.52 E-value=0.00022 Score=68.78 Aligned_cols=266 Identities=12% Similarity=0.125 Sum_probs=154.9
Q ss_pred CCEEEEEeeCCEEEEEECCCCcEEEEEec-----CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE--EEeeccCC
Q 002615 599 FSQVVVGCYKGKIYFLDYLTGDIYWTFQT-----CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC--VYKLPCGG 671 (900)
Q Consensus 599 ~~~i~vg~~dg~l~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~--~w~~~~~~ 671 (900)
|..++.++.|..|..|+...+.. |.... +....-+.+..+.++++.++|.|.++..|...+++. +-.+..+.
T Consensus 27 g~ilAscg~Dk~vriw~~~~~~s-~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHE 105 (312)
T KOG0645|consen 27 GVILASCGTDKAVRIWSTSSGDS-WTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHE 105 (312)
T ss_pred ceEEEeecCCceEEEEecCCCCc-EEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccc
Confidence 33467777888999999664433 44331 223334456777788999999999999998776643 33333344
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCC-CceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKAL-PFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~-~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
+-.-+.+...+++.|..++.+..+..|..... ..+..--.+.+....-.....+..+.++.+++|..|..|. ..+. -
T Consensus 106 nEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dd-d 184 (312)
T KOG0645|consen 106 NEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDD-D 184 (312)
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCC-C
Confidence 44455566666788888999999998887631 1122222233333333344556678999999999999988 4222 2
Q ss_pred eee--cCCC---ceeccccccccC-CCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCe
Q 002615 750 WRC--RTGG---PIFAGPCTSFAL-PSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDR 823 (900)
Q Consensus 750 w~~--~~~~---~~~~~~~~~~~~-~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (900)
|.. +..+ .+++.. +.. +..+..++.|+.+..|...++ |.......+|..+.. ++
T Consensus 185 W~c~~tl~g~~~TVW~~~---F~~~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W~--------------~~ 244 (312)
T KOG0645|consen 185 WECVQTLDGHENTVWSLA---FDNIGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPWD--------------NG 244 (312)
T ss_pred eeEEEEecCccceEEEEE---ecCCCceEEEecCCcceEeeeeccC---cchhcccceEeeeec--------------cc
Confidence 332 1111 222222 333 347888888888887764322 111111233333322 57
Q ss_pred EEEEEcCCCcEEEEEeecCcccccccccccceeeee-eeccCCccccCcee---eCCEEEEeeeCCeEEEEEcc
Q 002615 824 LVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFA-KLELQGDIFSSPVM---IGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 824 ~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ss~~~---~~~~l~vg~~dg~l~~ld~~ 893 (900)
.|+.++.|+.|.+|....+..+-. ..++. ...-++.-+.+... ..++|..|+.||.+..|.+.
T Consensus 245 ~IaS~ggD~~i~lf~~s~~~d~p~-------~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 245 VIASGGGDDAIRLFKESDSPDEPS-------WNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ceEeccCCCEEEEEEecCCCCCch-------HHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 889999999999997764311000 01111 01112222222222 24789999999999998764
No 280
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.52 E-value=0.00011 Score=75.38 Aligned_cols=214 Identities=15% Similarity=0.085 Sum_probs=122.6
Q ss_pred ceEEEE-ecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec--C--Cce
Q 002615 557 DIYLFV-GSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT--C--GEV 631 (900)
Q Consensus 557 ~~~v~i-gs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~--~--~~~ 631 (900)
++.+|. -...+.|+.+|+.+++.. .+..+.. .+..+...++.+|++..++ +..+|..+|+..-.... . ...
T Consensus 11 ~g~l~~~D~~~~~i~~~~~~~~~~~-~~~~~~~--~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~ 86 (246)
T PF08450_consen 11 DGRLYWVDIPGGRIYRVDPDTGEVE-VIDLPGP--NGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFN 86 (246)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEE-EEESSSE--EEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTE
T ss_pred CCEEEEEEcCCCEEEEEECCCCeEE-EEecCCC--ceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccC
Confidence 444554 446789999999988764 3444442 3556663447888887655 66669999977544443 1 222
Q ss_pred ee-eeeEeCCCCEEEEecCC---------CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEE-eCCCcEEEEEc
Q 002615 632 KC-QPVVDAPRQLIWCGSHD---------HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVA-STSGRLTAISV 700 (900)
Q Consensus 632 ~~-~~~~~~~~~~i~~gs~d---------g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~-t~~g~l~~~~~ 700 (900)
.. -.+++ .++.+|+++.. |.+|.++.. ++....... -......+++++++.||+. +..+.|+++++
T Consensus 87 ~~ND~~vd-~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 87 RPNDVAVD-PDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-LGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp EEEEEEE--TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-ESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEc-CCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC-cccccceEECCcchheeecccccceeEEEec
Confidence 22 23444 45779987532 569999988 665433221 1223345666667788865 56788999998
Q ss_pred CCCCceeeeE---eecCCcc-eeeeeeeeCCCEEEEEee-cCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEEE
Q 002615 701 KALPFHTLWL---HELEVPA-FASLCITSANRHVICCLV-DGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLIC 775 (900)
Q Consensus 701 ~~~~g~~~w~---~~~~~~~-~~s~~~~~~~~~i~~~~~-~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g 775 (900)
+...+...-. ....... .........++++|++.. .+.|.+++.+|+++-.+..+.+..+..++.-...+.||+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 164 DADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIELPVPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp ETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred cccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence 7533311111 1222211 122223345778999865 6889999966998877766533222222212234567776
Q ss_pred ee
Q 002615 776 SR 777 (900)
Q Consensus 776 ~~ 777 (900)
+.
T Consensus 244 ta 245 (246)
T PF08450_consen 244 TA 245 (246)
T ss_dssp EB
T ss_pred eC
Confidence 53
No 281
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=98.50 E-value=2.7e-06 Score=84.69 Aligned_cols=258 Identities=12% Similarity=0.111 Sum_probs=150.4
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceee
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAID 680 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~ 680 (900)
.++.|+.||.|..||+.+-+..|+++.+........++. +.+++.+.|.+|..|-... .++..+.+.+.+...-...
T Consensus 81 ~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~tilg~s~~~gIdh~~ 157 (433)
T KOG0268|consen 81 TVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTILGKSVYLGIDHHR 157 (433)
T ss_pred hhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC-Ccceeeecccccccccccc
Confidence 368899999999999999999999998876665555554 4455556688888876442 3444443332222111111
Q ss_pred ccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCC-EEEEEeecCcEEEEC-CCCCEEeeecCC---
Q 002615 681 EVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANR-HVICCLVDGHVVALD-SSGSIIWRCRTG--- 755 (900)
Q Consensus 681 ~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~-~i~~~~~~g~v~~~d-~~G~~~w~~~~~--- 755 (900)
.+. .++|.+-.+-.||..- -.++-+...+.+.+.+....+... .+.+|..|+.|+.|| .++.++-.+...
T Consensus 158 --~~~-~FaTcGe~i~IWD~~R--~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRT 232 (433)
T KOG0268|consen 158 --KNS-VFATCGEQIDIWDEQR--DNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRT 232 (433)
T ss_pred --ccc-cccccCceeeeccccc--CCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccc
Confidence 122 2344455688888765 455555555555444444433333 445555899999999 888776554322
Q ss_pred CceeccccccccCCCeEEEEeeCCeEEEEeCCCCce-eeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcE
Q 002615 756 GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNL-LWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSI 834 (900)
Q Consensus 756 ~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v 834 (900)
..+...| ..-+..+++.|..+|.||...-+. +-.+.-+.......-+ .+-|..++.|+-|..|
T Consensus 233 N~IswnP-----eafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdf-----------sptG~EfvsgsyDksI 296 (433)
T KOG0268|consen 233 NTICWNP-----EAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDF-----------SPTGQEFVSGSYDKSI 296 (433)
T ss_pred cceecCc-----cccceeeccccccceehhhhhhcccchhhcccceeEEEecc-----------CCCcchhccccccceE
Confidence 1222222 223566778899999999754221 1111111111111111 1227889999999999
Q ss_pred EEEEeecCcccccccccccceeeeeeeccCCccccCc-eeeCCEEEEeeeCCeEEEEEcc
Q 002615 835 HILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSP-VMIGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 835 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~-~~~~~~l~vg~~dg~l~~ld~~ 893 (900)
++|..+.+.+...-++. .. ..++.-. -.+..+++.|+.|+++..|...
T Consensus 297 RIf~~~~~~SRdiYhtk-RM----------q~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 297 RIFPVNHGHSRDIYHTK-RM----------QHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred EEeecCCCcchhhhhHh-hh----------heeeEEEEeccccEEEecCCCcceeeeecc
Confidence 99999876443322211 01 0111100 0145688899999999999754
No 282
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=98.48 E-value=1.8e-05 Score=85.51 Aligned_cols=320 Identities=12% Similarity=0.088 Sum_probs=163.5
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEe----cCCc-----------e---------eeceeEecCCCEEEEEeeCCEE
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIK----LEGR-----------I---------ECSAAVLADFSQVVVGCYKGKI 611 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~----~~~~-----------~---------~~~~~~~~~~~~i~vg~~dg~l 611 (900)
...+|++|+.+|.|..|++.|-...-.++ ++.. . .....++...+.+.+--.|..|
T Consensus 269 s~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSl 348 (1080)
T KOG1408|consen 269 SSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSL 348 (1080)
T ss_pred ecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceE
Confidence 47789999999999999998754332221 1100 0 0122344344455544457889
Q ss_pred EEEECCCC----cE---------EEEEecCC-ceeeeeeEeCCCCEEEEecCCCeEEEEECCCC---eEEEeecc-----
Q 002615 612 YFLDYLTG----DI---------YWTFQTCG-EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY---RCVYKLPC----- 669 (900)
Q Consensus 612 ~~~d~~tG----~~---------~w~~~~~~-~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g---~~~w~~~~----- 669 (900)
|.||..+- +. +|..+.-. .+...+.-.-..+-+.+.+.|++|..||.+.+ ....+-.+
T Consensus 349 YvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ 428 (1080)
T KOG1408|consen 349 YVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLS 428 (1080)
T ss_pred EEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhh
Confidence 99998763 22 34433211 22222111112344677888999999998752 22111000
Q ss_pred ---------------C-------------C-ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceee
Q 002615 670 ---------------G-------------G-SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFAS 720 (900)
Q Consensus 670 ---------------~-------------~-~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s 720 (900)
+ + .-+.+.++.+++..|..|...|.|..|++.. -+..-..+.+...+..
T Consensus 429 ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~--l~~~~~~eAHesEilc 506 (1080)
T KOG1408|consen 429 KIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE--LEYTCFMEAHESEILC 506 (1080)
T ss_pred cCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehh--hhhhhheecccceeEE
Confidence 0 0 1123456667677888888889999999876 3333333333322211
Q ss_pred eee---eeCCCEEEEEeecCcEEEEC-C-CCCEEeeecC-CCceeccccccccCCCeEEEEeeCCeEEEE-eCCCCceee
Q 002615 721 LCI---TSANRHVICCLVDGHVVALD-S-SGSIIWRCRT-GGPIFAGPCTSFALPSQVLICSRNGSIYSF-EQESGNLLW 793 (900)
Q Consensus 721 ~~~---~~~~~~i~~~~~~g~v~~~d-~-~G~~~w~~~~-~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~-d~~tG~~~w 793 (900)
... ......+..++.|.-|++|| . +=.++-++.. ...+.+......+.+-.++.+..|..++.- +.+.+.-.-
T Consensus 507 LeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~ 586 (1080)
T KOG1408|consen 507 LEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRL 586 (1080)
T ss_pred EeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCcee
Confidence 111 11234566677788889998 3 3222222221 112222221112222345555555543321 111111111
Q ss_pred EEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCce-
Q 002615 794 EYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPV- 872 (900)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~- 872 (900)
.........- .+++-....+.-+++.+++.|.+|++|+.++| +....++-....-.+++
T Consensus 587 f~r~t~t~~k-------tTlYDm~Vdp~~k~v~t~cQDrnirif~i~sg-------------Kq~k~FKgs~~~eG~lIK 646 (1080)
T KOG1408|consen 587 FPRHTQTLSK-------TTLYDMAVDPTSKLVVTVCQDRNIRIFDIESG-------------KQVKSFKGSRDHEGDLIK 646 (1080)
T ss_pred cccccccccc-------ceEEEeeeCCCcceEEEEecccceEEEecccc-------------ceeeeecccccCCCceEE
Confidence 1011111000 11111222334788999999999999999987 33333332211111221
Q ss_pred --e--eCCEEEEeeeCCeEEEEEcccccc
Q 002615 873 --M--IGGRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 873 --~--~~~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
. .+.+|...|.|.+|-++|..+|+.
T Consensus 647 v~lDPSgiY~atScsdktl~~~Df~sgEc 675 (1080)
T KOG1408|consen 647 VILDPSGIYLATSCSDKTLCFVDFVSGEC 675 (1080)
T ss_pred EEECCCccEEEEeecCCceEEEEeccchh
Confidence 1 345666678899999999988873
No 283
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=98.48 E-value=2.6e-05 Score=84.41 Aligned_cols=309 Identities=13% Similarity=0.141 Sum_probs=175.2
Q ss_pred ceEEEEecCCCeEEEEECCCC-------------cEEEEEecCC-cee--eceeEecCCCEEEEEeeCCEEEEEECCCC-
Q 002615 557 DIYLFVGSHSHKFICADAKRS-------------SVLWEIKLEG-RIE--CSAAVLADFSQVVVGCYKGKIYFLDYLTG- 619 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG-------------~~~w~~~~~~-~~~--~~~~~~~~~~~i~vg~~dg~l~~~d~~tG- 619 (900)
...|-+.-.|+.||.||..+- ..+|..+.-. .++ .++++-. +.....+.||+|..||++.+
T Consensus 336 ~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~--~cF~TCSsD~TIRlW~l~~ct 413 (1080)
T KOG1408|consen 336 TDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPR--GCFTTCSSDGTIRLWDLAFCT 413 (1080)
T ss_pred CceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCc--cceeEecCCCcEEEeeccccc
Confidence 445555557888999998752 2445543211 221 2233322 23555667999999997653
Q ss_pred --cEEEEEec----------CC-----------------------c-eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE
Q 002615 620 --DIYWTFQT----------CG-----------------------E-VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC 663 (900)
Q Consensus 620 --~~~w~~~~----------~~-----------------------~-~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~ 663 (900)
.+..+--. .+ . -.-+..+.+++..+..|..-|+|..|++..-+.
T Consensus 414 nn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~ 493 (1080)
T KOG1408|consen 414 NNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEY 493 (1080)
T ss_pred ccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhh
Confidence 33211000 00 0 012334566667777787788999999877655
Q ss_pred EEeeccCCcc-----ccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCC--CEEEEEeec
Q 002615 664 VYKLPCGGSI-----FGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSAN--RHVICCLVD 736 (900)
Q Consensus 664 ~w~~~~~~~~-----~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~--~~i~~~~~~ 736 (900)
.-....+..- ++.|.+.. ..|..++.+..|..||... ...++.+...+...+.+.-+...+ -.++.++.|
T Consensus 494 ~~~~eAHesEilcLeyS~p~~~~--kLLASasrdRlIHV~Dv~r-ny~l~qtld~HSssITsvKFa~~gln~~MiscGAD 570 (1080)
T KOG1408|consen 494 TCFMEAHESEILCLEYSFPVLTN--KLLASASRDRLIHVYDVKR-NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGAD 570 (1080)
T ss_pred hhheecccceeEEEeecCchhhh--HhhhhccCCceEEEEeccc-ccchhhhhcccccceeEEEEeecCCceEEEeccCc
Confidence 5444443321 33444432 4566677788888898763 234444444444444444444333 345555555
Q ss_pred CcEEEEC--C--CCCEEee--ecCCC-ceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccc
Q 002615 737 GHVVALD--S--SGSIIWR--CRTGG-PIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDE 809 (900)
Q Consensus 737 g~v~~~d--~--~G~~~w~--~~~~~-~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~ 809 (900)
..++.-. + +|.+--+ ..... .++-..+ .-..+.+.+++.|..|..||.++|+..-.++-...--.+++-
T Consensus 571 ksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~V--dp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIK-- 646 (1080)
T KOG1408|consen 571 KSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAV--DPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIK-- 646 (1080)
T ss_pred hhhheehhccccCceeccccccccccceEEEeee--CCCcceEEEEecccceEEEeccccceeeeecccccCCCceEE--
Confidence 5443322 2 2322111 00111 1111110 112457888999999999999999998776643322111110
Q ss_pred ccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeC--CEEEEeeeCCeE
Q 002615 810 HLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIG--GRVFVGCRDDYI 887 (900)
Q Consensus 810 ~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~--~~l~vg~~dg~l 887 (900)
...-+++.+++..+.|.+|.++|.-+| +...+..-++++++...+.+ .+|+..+.||-|
T Consensus 647 ------v~lDPSgiY~atScsdktl~~~Df~sg-------------EcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCI 707 (1080)
T KOG1408|consen 647 ------VILDPSGIYLATSCSDKTLCFVDFVSG-------------ECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCI 707 (1080)
T ss_pred ------EEECCCccEEEEeecCCceEEEEeccc-------------hhhhhhcCcchheeeeeecccchhheeecCCceE
Confidence 112234788888889999999999887 55555556666666555533 578888889999
Q ss_pred EEEEcc
Q 002615 888 YCIALE 893 (900)
Q Consensus 888 ~~ld~~ 893 (900)
++|.+.
T Consensus 708 FvW~lp 713 (1080)
T KOG1408|consen 708 FVWKLP 713 (1080)
T ss_pred EEEECc
Confidence 999864
No 284
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=98.47 E-value=2.4e-05 Score=82.72 Aligned_cols=272 Identities=13% Similarity=0.126 Sum_probs=160.0
Q ss_pred eEEeeCCceEEE-EecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC
Q 002615 550 LVVLKDSDIYLF-VGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC 628 (900)
Q Consensus 550 ~v~~~~~~~~v~-igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~ 628 (900)
.+-.+.++.+++ .|+.--.|.+||..+-.+..+..+...+..-.++++|-..+++-..|-.|-+ ...-|.- .....+
T Consensus 56 ~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~Ief-Hak~G~h-y~~RIP 133 (703)
T KOG2321|consen 56 RIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEF-HAKYGRH-YRTRIP 133 (703)
T ss_pred eeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeee-hhhcCee-eeeecC
Confidence 343444566655 4667778999999988877776666555444556666556666665655433 2233322 222222
Q ss_pred CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceee
Q 002615 629 GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
...... .+....--+|++.....||.+|++.|..+-.+.........+-+...++.|.+||.+|.+-.||+.+ -...
T Consensus 134 ~~GRDm-~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~--ksrv 210 (703)
T KOG2321|consen 134 KFGRDM-KYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRD--KSRV 210 (703)
T ss_pred cCCccc-cccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchh--hhhh
Confidence 111111 1111123366666667899999999999888777655455555556678899999999999999886 3333
Q ss_pred eEeecCCc-----------ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC--ceeccccccccCCCeEEE
Q 002615 709 WLHELEVP-----------AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG--PIFAGPCTSFALPSQVLI 774 (900)
Q Consensus 709 w~~~~~~~-----------~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~--~~~~~~~~~~~~~~~l~~ 774 (900)
-..+.... ...+..+..++=.+-+|+.+|.++.|| .+.+++.....+. ++........ .++..++
T Consensus 211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~-~~q~~v~ 289 (703)
T KOG2321|consen 211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDT-DQQNKVV 289 (703)
T ss_pred eeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeeccccc-CCCceEE
Confidence 33333221 123333443445688999999999999 7666654433222 3322222122 2234444
Q ss_pred EeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 775 CSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 775 g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
......+..||..+|+..-......++.- .+. .+..+.++++-.++.+..|-.
T Consensus 290 S~Dk~~~kiWd~~~Gk~~asiEpt~~lND-~C~-----------~p~sGm~f~Ane~~~m~~yyi 342 (703)
T KOG2321|consen 290 SMDKRILKIWDECTGKPMASIEPTSDLND-FCF-----------VPGSGMFFTANESSKMHTYYI 342 (703)
T ss_pred ecchHHhhhcccccCCceeeccccCCcCc-eee-----------ecCCceEEEecCCCcceeEEc
Confidence 55556678899888887654443333211 111 223778888888887765533
No 285
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=98.47 E-value=2.2e-05 Score=76.14 Aligned_cols=270 Identities=16% Similarity=0.125 Sum_probs=159.2
Q ss_pred CceEEEEecCCCeEEEEECCCCcEE------EEEe------cC--Cc-eeeceeEec-CCCEEEEEeeCCEEEEEECCCC
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVL------WEIK------LE--GR-IECSAAVLA-DFSQVVVGCYKGKIYFLDYLTG 619 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~------w~~~------~~--~~-~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG 619 (900)
.+.++..|..||.+..||+++-.-. -+.. .+ .+ -..++...+ |.+....++.|.+|.+||..|-
T Consensus 55 egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl 134 (397)
T KOG4283|consen 55 EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL 134 (397)
T ss_pred cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccc
Confidence 5788999999999999998764311 0000 00 11 122333333 4456667889999999999999
Q ss_pred cEEEEEecCCceeee---eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC-ccccCceeeccCCEEEEEeCCCcE
Q 002615 620 DIYWTFQTCGEVKCQ---PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG-SIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 620 ~~~w~~~~~~~~~~~---~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~-~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
+..-.|+.++.+.+. |+.. ..-.|.+|+.+-.+...|+++|.+-.....+. .+.+.-.....+=.|+.|+.||.+
T Consensus 135 Q~a~~F~me~~VYshamSp~a~-sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~i 213 (397)
T KOG4283|consen 135 QEAVDFKMEGKVYSHAMSPMAM-SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAI 213 (397)
T ss_pred eeeEEeecCceeehhhcChhhh-cceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceE
Confidence 888888888877643 2222 23567778888889999999999877765542 222211111112457888999999
Q ss_pred EEEEcCCCCceeee--EeecC-C----------cceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCcee--
Q 002615 696 TAISVKALPFHTLW--LHELE-V----------PAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIF-- 759 (900)
Q Consensus 696 ~~~~~~~~~g~~~w--~~~~~-~----------~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~-- 759 (900)
..||+...+|...- ..+.. . ..+...+...++..++.++.+.++..++ .+|+-- ....+++.
T Consensus 214 rlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~nt--l~~~g~~~~n 291 (397)
T KOG4283|consen 214 RLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNT--LREFGPIIHN 291 (397)
T ss_pred EEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccc--cccccccccc
Confidence 99998875554322 11111 1 1123445555666777777788888888 666421 11111110
Q ss_pred --cccc--ccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEE
Q 002615 760 --AGPC--TSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIH 835 (900)
Q Consensus 760 --~~~~--~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~ 835 (900)
..+. +.....+.+..--.++.++.++.-+|.++-..+.+...+...+...+ -...+.|..|+.++
T Consensus 292 ~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~-----------fq~~~tg~~d~ni~ 360 (397)
T KOG4283|consen 292 QTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPD-----------FEQCFTGDMNGNIY 360 (397)
T ss_pred ccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCc-----------hhhhhccccCCccc
Confidence 0010 11111223333345688999999999886544444332222222211 34567888899988
Q ss_pred EEEe
Q 002615 836 ILRV 839 (900)
Q Consensus 836 ~~d~ 839 (900)
.|-+
T Consensus 361 ~w~p 364 (397)
T KOG4283|consen 361 MWSP 364 (397)
T ss_pred cccc
Confidence 8855
No 286
>KOG4328 consensus WD40 protein [Function unknown]
Probab=98.43 E-value=4.5e-05 Score=78.62 Aligned_cols=240 Identities=13% Similarity=0.109 Sum_probs=145.6
Q ss_pred ceeEecCC--CEEEEEeeCCEEEEEECCCCcE----EEEEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECCCCeE-
Q 002615 592 SAAVLADF--SQVVVGCYKGKIYFLDYLTGDI----YWTFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFRNYRC- 663 (900)
Q Consensus 592 ~~~~~~~~--~~i~vg~~dg~l~~~d~~tG~~----~w~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~- 663 (900)
+..+.+.. ..|.+|...|.|-.||..+.+. ...+..++..++...+.+ +...||..|+||++.+-|.+++..
T Consensus 191 ~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e 270 (498)
T KOG4328|consen 191 SLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISE 270 (498)
T ss_pred EEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhH
Confidence 44555433 4688899999999999842221 223334443344444443 346799999999999999887642
Q ss_pred -EEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCC-CEEEEEeecCcEEE
Q 002615 664 -VYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSAN-RHVICCLVDGHVVA 741 (900)
Q Consensus 664 -~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~-~~i~~~~~~g~v~~ 741 (900)
+...+.....+++.-+..+...+++++.-|.+..||.++ .|+.+|....+...+.+..+.+.. -.+..++.|+....
T Consensus 271 ~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~-~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kI 349 (498)
T KOG4328|consen 271 EVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRT-DGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKI 349 (498)
T ss_pred HHhhcCccceeeeeccccCCCccEEEeecccceEEEEeec-CCccchhhhhhhcccceeecCCCCchheeecccCcceee
Confidence 222222444555555555567788888778888999886 356677776666555555554443 35667788899989
Q ss_pred EC-C--CCCE---EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCC----CCceeeEEecCC--ceeccccccc
Q 002615 742 LD-S--SGSI---IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQE----SGNLLWEYSVGD--PITASAYIDE 809 (900)
Q Consensus 742 ~d-~--~G~~---~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~----tG~~~w~~~~~~--~~~~~~~~~~ 809 (900)
|| . .++. +..+.....+- +.+.+ -.+++|+..+.|..|.+||.. .-..+-.+.... .-..+++-.
T Consensus 350 WD~R~l~~K~sp~lst~~HrrsV~-sAyFS-Ps~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA- 426 (498)
T KOG4328|consen 350 WDLRQLRGKASPFLSTLPHRRSVN-SAYFS-PSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKA- 426 (498)
T ss_pred eehhhhcCCCCcceecccccceee-eeEEc-CCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhh-
Confidence 98 3 3332 33332222221 11111 135679999999999999963 112222222211 112222211
Q ss_pred ccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 810 HLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 810 ~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
...++..+|++|.....|-+||.+.+
T Consensus 427 -------~W~P~~~li~vg~~~r~IDv~~~~~~ 452 (498)
T KOG4328|consen 427 -------AWDPDYNLIVVGRYPRPIDVFDGNGG 452 (498)
T ss_pred -------eeCCCccEEEEeccCcceeEEcCCCC
Confidence 12345889999998888999998866
No 287
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.41 E-value=0.00039 Score=74.96 Aligned_cols=273 Identities=14% Similarity=0.137 Sum_probs=144.0
Q ss_pred EEEEE-eeCCEEEEEECCC-CcE--EEEEecCCceeeeeeEeCCCCEEEEecC-CCeEEEEECC-CCeEE--EeeccCCc
Q 002615 601 QVVVG-CYKGKIYFLDYLT-GDI--YWTFQTCGEVKCQPVVDAPRQLIWCGSH-DHNLYALDFR-NYRCV--YKLPCGGS 672 (900)
Q Consensus 601 ~i~vg-~~dg~l~~~d~~t-G~~--~w~~~~~~~~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~-~g~~~--w~~~~~~~ 672 (900)
++|++ ..++.|+.||..+ |++ +-++...+. .....+++++..+|+++. ++.++.|+.. +|+.. -.....+.
T Consensus 3 ~~y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~-~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~ 81 (330)
T PRK11028 3 IVYIASPESQQIHVWNLNHEGALTLLQVVDVPGQ-VQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGS 81 (330)
T ss_pred EEEEEcCCCCCEEEEEECCCCceeeeeEEecCCC-CccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCC
Confidence 46666 5578899999864 553 334443322 233456667788888754 6778888775 45432 22222222
Q ss_pred cccCceeeccCCEEEEEeC-CCcEEEEEcCCCCcee---eeEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC-CC-
Q 002615 673 IFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHT---LWLHELEVPAFASLCITSANRHVICCLV-DGHVVALD-SS- 745 (900)
Q Consensus 673 ~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~---~w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~~- 745 (900)
....++++++..+|+++. ++.+..|+.++ .|.. +..... ........+.++++.+|++.. ++.|.+|| .+
T Consensus 82 -p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 82 -PTHISTDHQGRFLFSASYNANCVSVSPLDK-DGIPVAPIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred -ceEEEECCCCCEEEEEEcCCCeEEEEEECC-CCCCCCceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 233455666778888875 67888998864 1322 211111 111123345667778887765 47899998 44
Q ss_pred CCEE------eeecCCCceecccc-ccc-cCCCeEEEEee-CCeEEEEeCC--CCceeeEEecCC--ceecccccccccc
Q 002615 746 GSII------WRCRTGGPIFAGPC-TSF-ALPSQVLICSR-NGSIYSFEQE--SGNLLWEYSVGD--PITASAYIDEHLQ 812 (900)
Q Consensus 746 G~~~------w~~~~~~~~~~~~~-~~~-~~~~~l~~g~~-dg~l~~~d~~--tG~~~w~~~~~~--~~~~~~~~~~~~~ 812 (900)
|.+. .+...+ ..|. +.. ..+..+|+.+. ++.|.+|+.+ +|++........ .....+.....
T Consensus 159 g~l~~~~~~~~~~~~g----~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-- 232 (330)
T PRK11028 159 GHLVAQEPAEVTTVEG----AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAAD-- 232 (330)
T ss_pred CcccccCCCceecCCC----CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCcccee--
Confidence 4331 111111 1121 112 23456788765 7889888876 455533222110 00000000000
Q ss_pred cccccccCCCeEEEEEcC-CCcEEEEEeecCcccccccccccceeeeeeec---cCCccccCceeeCCEEEEeee-CCeE
Q 002615 813 LKLESCLSIDRLVCICTS-SGSIHILRVNLDVTGKENQSKDHMVQEFAKLE---LQGDIFSSPVMIGGRVFVGCR-DDYI 887 (900)
Q Consensus 813 ~~~~~~~~~~~~l~~g~~-~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~ss~~~~~~~l~vg~~-dg~l 887 (900)
....++++++|++.. ++.|.+|+.+.... . .+...... .+..+..+| ++.+||++.+ ++.+
T Consensus 233 ---i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~-~--------~~~~~~~~~~~~p~~~~~~~--dg~~l~va~~~~~~v 298 (330)
T PRK11028 233 ---IHITPDGRHLYACDRTASLISVFSVSEDGS-V--------LSFEGHQPTETQPRGFNIDH--SGKYLIAAGQKSHHI 298 (330)
T ss_pred ---EEECCCCCEEEEecCCCCeEEEEEEeCCCC-e--------EEEeEEEeccccCCceEECC--CCCEEEEEEccCCcE
Confidence 001234788999865 67899998864310 0 01122211 122222222 5779999886 7778
Q ss_pred EEEEc--ccccc
Q 002615 888 YCIAL--ETQHL 897 (900)
Q Consensus 888 ~~ld~--~tg~~ 897 (900)
..|+. .+|.+
T Consensus 299 ~v~~~~~~~g~l 310 (330)
T PRK11028 299 SVYEIDGETGLL 310 (330)
T ss_pred EEEEEcCCCCcE
Confidence 88754 45654
No 288
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=98.39 E-value=3.7e-05 Score=76.37 Aligned_cols=190 Identities=13% Similarity=0.093 Sum_probs=109.4
Q ss_pred eEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEec--CCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce-eee
Q 002615 558 IYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLA--DFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV-KCQ 634 (900)
Q Consensus 558 ~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~-~~~ 634 (900)
..|.++-..|.+.+||..||+.+-+++........+.+.. ....|++++.||.|.+||.++-...-++...... ...
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 4577777889999999999999888876654333444443 3346899999999999999876544333332211 111
Q ss_pred eeEeC--CCCEEEEecC----CCeEEEEECCCCeE-EEee--ccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 635 PVVDA--PRQLIWCGSH----DHNLYALDFRNYRC-VYKL--PCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 635 ~~~~~--~~~~i~~gs~----dg~l~~~d~~~g~~-~w~~--~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
..++. .++.+-+|+. +-.|+.||.+.-+. +..+ .....+..-.....+.+.|+.|+.+|.+..||.+...-
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 22332 3455555642 45688999876543 2211 11222322222333457899999999999999774210
Q ss_pred e--eeeEeecCCcceeeeeeee-CCCEEEEEeecCcEEEEC-CCCCE
Q 002615 706 H--TLWLHELEVPAFASLCITS-ANRHVICCLVDGHVVALD-SSGSI 748 (900)
Q Consensus 706 ~--~~w~~~~~~~~~~s~~~~~-~~~~i~~~~~~g~v~~~d-~~G~~ 748 (900)
+ .+-..+... .+....... .-++||+-+..+.++.|+ ..|..
T Consensus 201 eDaL~~viN~~s-SI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~ 246 (376)
T KOG1188|consen 201 EDALLHVINHGS-SIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSE 246 (376)
T ss_pred hhhHHHhhcccc-eeeeeeeecCCcceEEEEEccCceeEEEccCCCh
Confidence 0 111111111 111222221 123678777777777777 55543
No 289
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=98.36 E-value=5.2e-05 Score=80.28 Aligned_cols=235 Identities=14% Similarity=0.111 Sum_probs=136.2
Q ss_pred ceeEecCCCEEE-EEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 592 SAAVLADFSQVV-VGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 592 ~~~~~~~~~~i~-vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
.+-+++||.+++ +|.|.=.|.+||..+-.+.....+...++...+++++-..+++-..|.+|-. ..+-| .-+...++
T Consensus 56 ~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~Ief-Hak~G-~hy~~RIP 133 (703)
T KOG2321|consen 56 RIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEF-HAKYG-RHYRTRIP 133 (703)
T ss_pred eeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeee-hhhcC-eeeeeecC
Confidence 456788988866 4778888999999888887766666666655555443222222223333321 11222 11111111
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
..- -..++....-.||++.....||++|++. |..+--+.........+.+....+.+.+|+.+|.+-+|| .+-..+
T Consensus 134 ~~G-RDm~y~~~scDly~~gsg~evYRlNLEq--GrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv 210 (703)
T KOG2321|consen 134 KFG-RDMKYHKPSCDLYLVGSGSEVYRLNLEQ--GRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV 210 (703)
T ss_pred cCC-ccccccCCCccEEEeecCcceEEEEccc--cccccccccccccceeeeecCccceEEecccCceEEEecchhhhhh
Confidence 100 0111221123467766677899999998 877766665544445555666688999999999999999 555444
Q ss_pred eeecCCCceeccc---------cccccCCC-eEEEEeeCCeEEEEeCCCCceeeEEecCC--ceeccccccccccccccc
Q 002615 750 WRCRTGGPIFAGP---------CTSFALPS-QVLICSRNGSIYSFEQESGNLLWEYSVGD--PITASAYIDEHLQLKLES 817 (900)
Q Consensus 750 w~~~~~~~~~~~~---------~~~~~~~~-~l~~g~~dg~l~~~d~~tG~~~w~~~~~~--~~~~~~~~~~~~~~~~~~ 817 (900)
-.+.....+-+.| .+.+..++ .+-+|+..|.++.||..+.+++...+... ++....+.+.
T Consensus 211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~-------- 282 (703)
T KOG2321|consen 211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDT-------- 282 (703)
T ss_pred eeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeeccccc--------
Confidence 3333222211111 12232323 68899999999999999888776544332 2222222211
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
.+...++..+...+.+||..+|
T Consensus 283 ---~~q~~v~S~Dk~~~kiWd~~~G 304 (703)
T KOG2321|consen 283 ---DQQNKVVSMDKRILKIWDECTG 304 (703)
T ss_pred ---CCCceEEecchHHhhhcccccC
Confidence 1233444445667899999877
No 290
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.34 E-value=0.00056 Score=71.01 Aligned_cols=303 Identities=15% Similarity=0.123 Sum_probs=158.6
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEE-----Ee--eCCEEEEEECCCCcEEEEEecCC
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVV-----GC--YKGKIYFLDYLTGDIYWTFQTCG 629 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~v-----g~--~dg~l~~~d~~tG~~~w~~~~~~ 629 (900)
++++...+.|. ++.+++.+|+.+. ...+-.+...+-++++|..|.. |+ ..+.||.++.++|+.....-.+.
T Consensus 50 GD~IiFt~~Dd-lWe~slk~g~~~r-itS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfGr 127 (668)
T COG4946 50 GDRIIFTCCDD-LWEYSLKDGKPLR-ITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFGR 127 (668)
T ss_pred CcEEEEEechH-HHHhhhccCCeeE-EecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEecc
Confidence 44555445554 8999999998764 3334445567778888876655 22 24579999999998764322222
Q ss_pred ceeeeeeEeCCCCEEEEecC------CCeEEEEECC----------------------------------------CCeE
Q 002615 630 EVKCQPVVDAPRQLIWCGSH------DHNLYALDFR----------------------------------------NYRC 663 (900)
Q Consensus 630 ~~~~~~~~~~~~~~i~~gs~------dg~l~~~d~~----------------------------------------~g~~ 663 (900)
...-..-+.+++..|+.... =-.+|.++.. +...
T Consensus 128 ~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGk 207 (668)
T COG4946 128 RFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGK 207 (668)
T ss_pred ccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccce
Confidence 21111112222221111100 0011221111 1123
Q ss_pred EEeeccCC----------ccccCceeeccCCEEEEEeC---CCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEE
Q 002615 664 VYKLPCGG----------SIFGSPAIDEVHDVLYVAST---SGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHV 730 (900)
Q Consensus 664 ~w~~~~~~----------~~~~~~~~~~~~~~l~v~t~---~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i 730 (900)
+|....++ ...++|++.. +++|+-|. -|.+|..|++ |+-+-++..-..- ..-....++.++
T Consensus 208 lWis~d~g~tFeK~vdl~~~vS~PmIV~--~RvYFlsD~eG~GnlYSvdld---GkDlrrHTnFtdY-Y~R~~nsDGkrI 281 (668)
T COG4946 208 LWISSDGGKTFEKFVDLDGNVSSPMIVG--ERVYFLSDHEGVGNLYSVDLD---GKDLRRHTNFTDY-YPRNANSDGKRI 281 (668)
T ss_pred EEEEecCCcceeeeeecCCCcCCceEEc--ceEEEEecccCccceEEeccC---CchhhhcCCchhc-cccccCCCCcEE
Confidence 45433332 2356777775 88888775 3678888877 5544433221111 112233345555
Q ss_pred EEEeecCcEEEEC-CCCCEEeeecCC--------Cceeccccc----cccCCCeEEEEeeCCeEEEEeCCCCceeeEEec
Q 002615 731 ICCLVDGHVVALD-SSGSIIWRCRTG--------GPIFAGPCT----SFALPSQVLICSRNGSIYSFEQESGNLLWEYSV 797 (900)
Q Consensus 731 ~~~~~~g~v~~~d-~~G~~~w~~~~~--------~~~~~~~~~----~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~ 797 (900)
+. +..|.|+.|| .+-+ +-+...+ .+.+..|.- ....+|..++--..|..+.+++-.|-.+ ++
T Consensus 282 vF-q~~GdIylydP~td~-lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~i---qv 356 (668)
T COG4946 282 VF-QNAGDIYLYDPETDS-LEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSI---QV 356 (668)
T ss_pred EE-ecCCcEEEeCCCcCc-ceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeE---Ec
Confidence 44 4678999999 4433 2222222 233444321 1122444444445677888886655433 22
Q ss_pred CCc--eecccccccccccccccccCCCeEEEEEcCCC-cEEEEEeecCcccccccccccceeeeeeeccCCccccCceee
Q 002615 798 GDP--ITASAYIDEHLQLKLESCLSIDRLVCICTSSG-SIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI 874 (900)
Q Consensus 798 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~ 874 (900)
+.+ +-..- .......+++|+.|| .|-++|..++ ++....+--|.+++--+-.
T Consensus 357 ~~~~~VrY~r------------~~~~~e~~vigt~dgD~l~iyd~~~~-------------e~kr~e~~lg~I~av~vs~ 411 (668)
T COG4946 357 GKKGGVRYRR------------IQVDPEGDVIGTNDGDKLGIYDKDGG-------------EVKRIEKDLGNIEAVKVSP 411 (668)
T ss_pred CCCCceEEEE------------EccCCcceEEeccCCceEEEEecCCc-------------eEEEeeCCccceEEEEEcC
Confidence 222 21111 111245788999999 7999998866 2222223334444433333
Q ss_pred C-CEEEEeeeCCeEEEEEcccccc
Q 002615 875 G-GRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 875 ~-~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
+ ..+.++.....|..+|..+|+.
T Consensus 412 dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 412 DGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred CCcEEEEEcCceEEEEEEecCCCe
Confidence 3 4588888888899999998875
No 291
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.32 E-value=0.00088 Score=72.37 Aligned_cols=282 Identities=17% Similarity=0.201 Sum_probs=145.9
Q ss_pred EEEEEeeC----CEEEEEEC--CCCcEEEEEec-CCceeeeeeEeCCCCEEEEecC----CCeEEEEECCC--CeEEE--
Q 002615 601 QVVVGCYK----GKIYFLDY--LTGDIYWTFQT-CGEVKCQPVVDAPRQLIWCGSH----DHNLYALDFRN--YRCVY-- 665 (900)
Q Consensus 601 ~i~vg~~d----g~l~~~d~--~tG~~~w~~~~-~~~~~~~~~~~~~~~~i~~gs~----dg~l~~~d~~~--g~~~w-- 665 (900)
.+|+|++. +.||.|+. ++|++...... .....+...++++++.||+... ++.|.+|+... |++..
T Consensus 1 ~~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 1 TLYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred CEEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 47899998 67877765 77776543222 2223344566778899999865 46777665543 55543
Q ss_pred eeccCCccccCceeeccCCEEEEEeC-CCcEEEEEcCCCCceeeeEe-----ecC--------CcceeeeeeeeCCCEEE
Q 002615 666 KLPCGGSIFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHTLWLH-----ELE--------VPAFASLCITSANRHVI 731 (900)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~~w~~-----~~~--------~~~~~s~~~~~~~~~i~ 731 (900)
+....+..-...++++++..||++.. +|.+..++++.. |.+.... ... .+......+.++++.+|
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~-g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~ 159 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDD-GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVY 159 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCC-cccceeeeecccCCCCCcccccccccceeEEECCCCCEEE
Confidence 23323443344566677788999885 778888888752 5433321 110 11123445566778888
Q ss_pred EEee-cCcEEEEC-C--CCCEEeeecCCCceecccc-cccc-CCCeEEEEee-CCeEEEEeCC--CCceeeEEecCC---
Q 002615 732 CCLV-DGHVVALD-S--SGSIIWRCRTGGPIFAGPC-TSFA-LPSQVLICSR-NGSIYSFEQE--SGNLLWEYSVGD--- 799 (900)
Q Consensus 732 ~~~~-~g~v~~~d-~--~G~~~w~~~~~~~~~~~~~-~~~~-~~~~l~~g~~-dg~l~~~d~~--tG~~~w~~~~~~--- 799 (900)
+... ...|+.|+ . ++++.-.....-+.-+.|. +.+. ....+|+.+. ++.|..|+.. +|++........
T Consensus 160 v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 160 VPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE 239 (345)
T ss_dssp EEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred EEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence 8643 34677776 3 3334221111111112221 1111 2446777653 5667777666 665543221111
Q ss_pred ceecccccccccccccccccCCCeEEEEEcC-CCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCC
Q 002615 800 PITASAYIDEHLQLKLESCLSIDRLVCICTS-SGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGG 876 (900)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~ 876 (900)
....... .. .....++++++|+... .+.|.+|+.+.. .+. .+........+..-....+ +++
T Consensus 240 ~~~~~~~-~~-----~i~ispdg~~lyvsnr~~~sI~vf~~d~~-~g~--------l~~~~~~~~~G~~Pr~~~~s~~g~ 304 (345)
T PF10282_consen 240 GFTGENA-PA-----EIAISPDGRFLYVSNRGSNSISVFDLDPA-TGT--------LTLVQTVPTGGKFPRHFAFSPDGR 304 (345)
T ss_dssp TSCSSSS-EE-----EEEE-TTSSEEEEEECTTTEEEEEEECTT-TTT--------EEEEEEEEESSSSEEEEEE-TTSS
T ss_pred cccccCC-ce-----eEEEecCCCEEEEEeccCCEEEEEEEecC-CCc--------eEEEEEEeCCCCCccEEEEeCCCC
Confidence 0000000 00 0112334788888765 456888888421 111 1223333333332222233 578
Q ss_pred EEEEeee-CCeEEEE--Eccccccc
Q 002615 877 RVFVGCR-DDYIYCI--ALETQHLE 898 (900)
Q Consensus 877 ~l~vg~~-dg~l~~l--d~~tg~~~ 898 (900)
.||+++. ++.|.+| |.++|+++
T Consensus 305 ~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 305 YLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCcEE
Confidence 9999885 4577766 45688764
No 292
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.32 E-value=0.00066 Score=69.64 Aligned_cols=239 Identities=15% Similarity=0.140 Sum_probs=145.4
Q ss_pred eCCceEEEEec----------CCCeEEEEECCCCcEEEEEecCC--ce-----eeceeEecCCCEEEEEee--CCEEEEE
Q 002615 554 KDSDIYLFVGS----------HSHKFICADAKRSSVLWEIKLEG--RI-----ECSAAVLADFSQVVVGCY--KGKIYFL 614 (900)
Q Consensus 554 ~~~~~~v~igs----------~~g~l~~~d~~tG~~~w~~~~~~--~~-----~~~~~~~~~~~~i~vg~~--dg~l~~~ 614 (900)
+.++..+|+.+ ....|..||..|-++.++..++. +. .....++.++.+++|-.. ...|-.+
T Consensus 44 spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVV 123 (342)
T PF06433_consen 44 SPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVV 123 (342)
T ss_dssp -TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEE
T ss_pred CCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEE
Confidence 34566666633 22358999999999999988775 32 123457788888888643 4579999
Q ss_pred ECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECC-CCeEEEeecc-----CCccccCceeeccCCEEEE
Q 002615 615 DYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFR-NYRCVYKLPC-----GGSIFGSPAIDEVHDVLYV 688 (900)
Q Consensus 615 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~-~g~~~w~~~~-----~~~~~~~~~~~~~~~~l~v 688 (900)
|.+.++.+-.+++++=...-|. .+..+..-+.||.+..+.+. .|+...+... ..+++..+.....++.+|+
T Consensus 124 Dl~~~kvv~ei~~PGC~~iyP~---~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F 200 (342)
T PF06433_consen 124 DLAAKKVVGEIDTPGCWLIYPS---GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYF 200 (342)
T ss_dssp ETTTTEEEEEEEGTSEEEEEEE---ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEE
T ss_pred ECCCCceeeeecCCCEEEEEec---CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEE
Confidence 9999999988888763333332 23456677789998887766 6776633211 2346666776666788999
Q ss_pred EeCCCcEEEEEcCCCCcee--eeEeecCC--------cceeeeeeeeCCCEEEEEeecC----------cEEEEC-CCCC
Q 002615 689 ASTSGRLTAISVKALPFHT--LWLHELEV--------PAFASLCITSANRHVICCLVDG----------HVVALD-SSGS 747 (900)
Q Consensus 689 ~t~~g~l~~~~~~~~~g~~--~w~~~~~~--------~~~~s~~~~~~~~~i~~~~~~g----------~v~~~d-~~G~ 747 (900)
-|.+|.++..+.....-+. -|..-... ....-.++....+++|+--..| .|.++| .+++
T Consensus 201 ~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~k 280 (342)
T PF06433_consen 201 VSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHK 280 (342)
T ss_dssp EBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTE
T ss_pred EecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCe
Confidence 9999999999987522122 23221100 0112234445567888753321 367777 7777
Q ss_pred EEeeecCCCceeccccccccCCCeEEEEe-eCCeEEEEeCCCCceeeEEe
Q 002615 748 IIWRCRTGGPIFAGPCTSFALPSQVLICS-RNGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 748 ~~w~~~~~~~~~~~~~~~~~~~~~l~~g~-~dg~l~~~d~~tG~~~w~~~ 796 (900)
.+.+++...++.+.. +..+..-.||..+ .++.|+.+|..+|+++.+.+
T Consensus 281 rv~Ri~l~~~~~Si~-Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 281 RVARIPLEHPIDSIA-VSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEEEEEEESEEE-EESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEEEEeCCCccceEE-EccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 776666555543332 2333334566554 46899999999999987664
No 293
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=98.32 E-value=3.1e-05 Score=80.29 Aligned_cols=187 Identities=13% Similarity=0.130 Sum_probs=109.8
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC-ccee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV-PAFA 719 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~-~~~~ 719 (900)
.-+++.|+..+.+..||.+...+....+-+........+...+.+|..++..|.|...+..+ +...-.+..+. ....
T Consensus 91 S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t--~~~tt~f~~~sgqsvR 168 (673)
T KOG4378|consen 91 SLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKT--KQKTTTFTIDSGQSVR 168 (673)
T ss_pred ceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEeccc--CccccceecCCCCeEE
Confidence 35566778889999999985444433333333333344444456677778888898888776 43322222221 1111
Q ss_pred eeeeeeC-CCEEEEEeecCcEEEECCCCC-EEeeec--CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEE
Q 002615 720 SLCITSA-NRHVICCLVDGHVVALDSSGS-IIWRCR--TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEY 795 (900)
Q Consensus 720 s~~~~~~-~~~i~~~~~~g~v~~~d~~G~-~~w~~~--~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~ 795 (900)
-...... ...+.+++++|.|..||.+|. +++.+. ...|. ..-|......-.++....|..|+.||..+.+..-.+
T Consensus 169 ll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~-~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l 247 (673)
T KOG4378|consen 169 LLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPC-RGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRL 247 (673)
T ss_pred EeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCc-CcceecCCccceEEEecccceEEEeeccccccccee
Confidence 1112222 234566788999999995453 333222 11121 111222223334555678999999998766555444
Q ss_pred ecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 796 SVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
....+..+..+... +-++++|+..|.|+.||.+.-
T Consensus 248 ~y~~Plstvaf~~~------------G~~L~aG~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 248 TYSHPLSTVAFSEC------------GTYLCAGNSKGELIAYDMRST 282 (673)
T ss_pred eecCCcceeeecCC------------ceEEEeecCCceEEEEecccC
Confidence 44555544444443 889999999999999999854
No 294
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.29 E-value=0.00045 Score=77.03 Aligned_cols=221 Identities=14% Similarity=0.101 Sum_probs=125.8
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|.+ |+..-..........++.+++++..|+..+++ ..||.+|..+|+..-.....+ ....+.+.+++..
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~ 253 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKG-SNSAPAWSPDGRT 253 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCC-CccceEECCCCCE
Confidence 368888875 43322222333344578899999888777653 359999999997653322332 3356778887777
Q ss_pred EEE-ecCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWC-GSHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~-gs~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++ .+.+| .||.+|..+++.. +...+......+...+++..+++.+.. | .++.++..+ ++.. ........
T Consensus 254 la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~--g~~~-~lt~~g~~ 329 (427)
T PRK02889 254 LAVALSRDGNSQIYTVNADGSGLR-RLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG--GAAQ-RVTFTGSY 329 (427)
T ss_pred EEEEEccCCCceEEEEECCCCCcE-ECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC--CceE-EEecCCCC
Confidence 654 45555 4888888776543 333333445567777767777766542 3 466666554 4321 11122222
Q ss_pred eeeeeeeeCCCEEEEEeecC---cEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCC---eEEEEeCCCCc
Q 002615 718 FASLCITSANRHVICCLVDG---HVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNG---SIYSFEQESGN 790 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g---~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg---~l~~~d~~tG~ 790 (900)
..++.+.+++..++..+.++ .|+.+| .+|+...-.. ... ...+.... ++..|++.+.++ .++.++. +|.
T Consensus 330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~-~~~-~~~p~~sp-dg~~l~~~~~~~g~~~l~~~~~-~g~ 405 (427)
T PRK02889 330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTD-TTR-DESPSFAP-NGRYILYATQQGGRSVLAAVSS-DGR 405 (427)
T ss_pred cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccC-CCC-ccCceECC-CCCEEEEEEecCCCEEEEEEEC-CCC
Confidence 23456677777777665444 588899 7776543222 111 12222222 234566655433 4777776 566
Q ss_pred eeeEEec
Q 002615 791 LLWEYSV 797 (900)
Q Consensus 791 ~~w~~~~ 797 (900)
.......
T Consensus 406 ~~~~l~~ 412 (427)
T PRK02889 406 IKQRLSV 412 (427)
T ss_pred ceEEeec
Confidence 6655543
No 295
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.29 E-value=0.00042 Score=77.66 Aligned_cols=215 Identities=12% Similarity=0.149 Sum_probs=123.9
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee---CCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY---KGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~---dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
.|+.+|.+.+.... +..+.....++.+++|++.|+..++ +..||.+|..+|+..-.....+ ....+.+.+++..|
T Consensus 183 ~l~~~d~dg~~~~~-lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~l 260 (435)
T PRK05137 183 RLAIMDQDGANVRY-LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPG-MTFAPRFSPDGRKV 260 (435)
T ss_pred EEEEECCCCCCcEE-EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCC-cccCcEECCCCCEE
Confidence 68888886555433 3333444557889999988777654 3579999999987643222222 33466777777666
Q ss_pred E-EecCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCcce
Q 002615 645 W-CGSHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 645 ~-~gs~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
+ +.+.++ .||.+|..+++... ..........+...+++..|++.+.. | .++.+|.++ ++. .+........
T Consensus 261 a~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g--~~~-~~lt~~~~~~ 336 (435)
T PRK05137 261 VMSLSQGGNTDIYTMDLRSGTTTR-LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG--SNP-RRISFGGGRY 336 (435)
T ss_pred EEEEecCCCceEEEEECCCCceEE-ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC--CCe-EEeecCCCcc
Confidence 4 444444 59999999887643 33333445567777767777776642 2 688888765 433 2222222223
Q ss_pred eeeeeeeCCCEEEEEeec---CcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEee-C-----CeEEEEeCCC
Q 002615 719 ASLCITSANRHVICCLVD---GHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSR-N-----GSIYSFEQES 788 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~---g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~-d-----g~l~~~d~~t 788 (900)
..+.+.++++.++....+ ..++.+| .++.. .....+. ....+.... .+..|++.+. . ..||.+|...
T Consensus 337 ~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~~-~~~~p~~sp-DG~~i~~~~~~~~~~~~~~L~~~dl~g 413 (435)
T PRK05137 337 STPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSGF-LVEGPTWAP-NGRVIMFFRQTPGSGGAPKLYTVDLTG 413 (435)
T ss_pred cCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCCC-CCCCCeECC-CCCEEEEEEccCCCCCcceEEEEECCC
Confidence 455677778887766543 2577777 44332 2222221 112222222 2344555433 2 2578888765
Q ss_pred Cce
Q 002615 789 GNL 791 (900)
Q Consensus 789 G~~ 791 (900)
++.
T Consensus 414 ~~~ 416 (435)
T PRK05137 414 RNE 416 (435)
T ss_pred Cce
Confidence 443
No 296
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.27 E-value=0.00056 Score=70.12 Aligned_cols=195 Identities=16% Similarity=0.205 Sum_probs=112.7
Q ss_pred ceeEecCCCEEEEE-eeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-
Q 002615 592 SAAVLADFSQVVVG-CYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC- 669 (900)
Q Consensus 592 ~~~~~~~~~~i~vg-~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~- 669 (900)
++++....+.+|+. ...+.|+.+++.+++.. .+..++ ....++...++.+|++..++ +..+|.++|+.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~-~~~~~~--~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE-VIDLPG--PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE-EEESSS--EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE-EEecCC--CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeecc
Confidence 45666534455554 45789999998887654 234444 22334442458888887654 66669999976554443
Q ss_pred -CC---ccccCceeeccCCEEEEEeCC---------CcEEEEEcCCCCceeee-EeecCCcceeeeeeeeCCCEEEEE-e
Q 002615 670 -GG---SIFGSPAIDEVHDVLYVASTS---------GRLTAISVKALPFHTLW-LHELEVPAFASLCITSANRHVICC-L 734 (900)
Q Consensus 670 -~~---~~~~~~~~~~~~~~l~v~t~~---------g~l~~~~~~~~~g~~~w-~~~~~~~~~~s~~~~~~~~~i~~~-~ 734 (900)
+. ......++++ ++.+|+++.. |.+++++.+ ++... ...... -...++..+++.+|+. +
T Consensus 80 ~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~---~~~~~~~~~~~~--pNGi~~s~dg~~lyv~ds 153 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD---GKVTVVADGLGF--PNGIAFSPDGKTLYVADS 153 (246)
T ss_dssp TTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT---SEEEEEEEEESS--EEEEEEETTSSEEEEEET
T ss_pred CCCcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC---CeEEEEecCccc--ccceEECCcchheeeccc
Confidence 21 2223345555 5779998742 568888876 23221 112221 1345566777778765 4
Q ss_pred ecCcEEEEC--CCCC-EE----e-eecCCCceeccccccccCCCeEEEEee-CCeEEEEeCCCCceeeEEecCC
Q 002615 735 VDGHVVALD--SSGS-II----W-RCRTGGPIFAGPCTSFALPSQVLICSR-NGSIYSFEQESGNLLWEYSVGD 799 (900)
Q Consensus 735 ~~g~v~~~d--~~G~-~~----w-~~~~~~~~~~~~~~~~~~~~~l~~g~~-dg~l~~~d~~tG~~~w~~~~~~ 799 (900)
..+.|+.++ ..+. +. + ....... ....+..+.+++||++.. .+.|+++|++ |+++-.+.++.
T Consensus 154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g--~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~ 224 (246)
T PF08450_consen 154 FNGRIWRFDLDADGGELSNRRVFIDFPGGPG--YPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPV 224 (246)
T ss_dssp TTTEEEEEEEETTTCCEEEEEEEEE-SSSSC--EEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SS
T ss_pred ccceeEEEeccccccceeeeeeEEEcCCCCc--CCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCC
Confidence 567888888 3343 21 1 2221110 011233556889999865 6889999987 99988777773
No 297
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.25 E-value=0.0027 Score=68.57 Aligned_cols=271 Identities=14% Similarity=0.155 Sum_probs=145.0
Q ss_pred EEEEecCC----CeEEEEE--CCCCcEEEEEec-CCceeeceeEecCCCEEEEEee----CCEEEEEECC--CCcEEE--
Q 002615 559 YLFVGSHS----HKFICAD--AKRSSVLWEIKL-EGRIECSAAVLADFSQVVVGCY----KGKIYFLDYL--TGDIYW-- 623 (900)
Q Consensus 559 ~v~igs~~----g~l~~~d--~~tG~~~w~~~~-~~~~~~~~~~~~~~~~i~vg~~----dg~l~~~d~~--tG~~~w-- 623 (900)
++|+|+.. +.|+.|+ ..+|++...... ........+++++++++|+... +|.|..|+.. +|++..
T Consensus 1 ~~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 1 TLYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred CEEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 47888876 4666655 477776543221 1112234567788899999876 4577666544 365543
Q ss_pred EEecCCceeeeeeEeCCCCEEEEecC-CCeEEEEECCC-CeEEEeec---c--CCc--------cccCceeeccCCEEEE
Q 002615 624 TFQTCGEVKCQPVVDAPRQLIWCGSH-DHNLYALDFRN-YRCVYKLP---C--GGS--------IFGSPAIDEVHDVLYV 688 (900)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~~-g~~~w~~~---~--~~~--------~~~~~~~~~~~~~l~v 688 (900)
+....+...+...+++++..+|++.+ +|.+..++... |.+..... . .+. -.-...++++++.+|+
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 34434555566677788889999875 67888888765 65443321 1 010 0112345666678888
Q ss_pred EeC-CCcEEEEEcCCCCceeeeEe--ecCC-cceeeeeeeeCCCEEEEEee-cCcEEEEC-C--CCCEEe--eecCCCce
Q 002615 689 AST-SGRLTAISVKALPFHTLWLH--ELEV-PAFASLCITSANRHVICCLV-DGHVVALD-S--SGSIIW--RCRTGGPI 758 (900)
Q Consensus 689 ~t~-~g~l~~~~~~~~~g~~~w~~--~~~~-~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~--~G~~~w--~~~~~~~~ 758 (900)
... ...|+.|+.+...++..... .... ..-....+.+++.++|+... ++.|.+++ . +|.... .......-
T Consensus 161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~ 240 (345)
T PF10282_consen 161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEG 240 (345)
T ss_dssp EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETT
T ss_pred EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccc
Confidence 764 34688888876444332211 1111 11123455667788888754 56788877 4 664432 22211000
Q ss_pred ec---cc-ccccc-CCCeEEEEee-CCeEEEEeC--CCCceeeE--EecCCceecccccccccccccccccCCCeEEEEE
Q 002615 759 FA---GP-CTSFA-LPSQVLICSR-NGSIYSFEQ--ESGNLLWE--YSVGDPITASAYIDEHLQLKLESCLSIDRLVCIC 828 (900)
Q Consensus 759 ~~---~~-~~~~~-~~~~l~~g~~-dg~l~~~d~--~tG~~~w~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 828 (900)
+. .+ .+... ++..||+... .+.|.+|+. ++|++... +...........+ .+++++++++
T Consensus 241 ~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~-----------s~~g~~l~Va 309 (345)
T PF10282_consen 241 FTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAF-----------SPDGRYLYVA 309 (345)
T ss_dssp SCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE------------TTSSEEEEE
T ss_pred ccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEE-----------eCCCCEEEEE
Confidence 00 11 11122 3456888765 345666664 66777542 3332221111111 2237888877
Q ss_pred c-CCCcEEEEEee
Q 002615 829 T-SSGSIHILRVN 840 (900)
Q Consensus 829 ~-~~G~v~~~d~~ 840 (900)
. .++.|.+|+.+
T Consensus 310 ~~~s~~v~vf~~d 322 (345)
T PF10282_consen 310 NQDSNTVSVFDID 322 (345)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ecCCCeEEEEEEe
Confidence 6 56788888775
No 298
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=98.24 E-value=0.00012 Score=77.92 Aligned_cols=184 Identities=11% Similarity=0.073 Sum_probs=111.0
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCC-EEEEEeeCCEEEEEECCCCcE-------------
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFS-QVVVGCYKGKIYFLDYLTGDI------------- 621 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~-~i~vg~~dg~l~~~d~~tG~~------------- 621 (900)
.+..|..|+.+|.|..|...||.++|.+.+.+.|. ++.+.+... .|++...+..+..+|+.=|..
T Consensus 411 ~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~-~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~ 489 (733)
T KOG0650|consen 411 SGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIR-SVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASA 489 (733)
T ss_pred CcceeeecCCCCcEEEEEeecceEEEEEeecceeE-EEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcC
Confidence 56788889999999999999999999998887654 455555433 234444455566666554511
Q ss_pred -----------EEEEec----CCce---------eeeeeEeCCCCEEEEecC---CCeEEEEECCCCeEEEeeccCCccc
Q 002615 622 -----------YWTFQT----CGEV---------KCQPVVDAPRQLIWCGSH---DHNLYALDFRNYRCVYKLPCGGSIF 674 (900)
Q Consensus 622 -----------~w~~~~----~~~~---------~~~~~~~~~~~~i~~gs~---dg~l~~~d~~~g~~~w~~~~~~~~~ 674 (900)
.|.... ...+ +.+..+...+.++.+... ...++..++..++..--+...+...
T Consensus 490 ~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~v 569 (733)
T KOG0650|consen 490 PNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLV 569 (733)
T ss_pred CCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCce
Confidence 232110 0000 011122223334333222 2345555555544433333333333
Q ss_pred cCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 675 GSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 675 ~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
....+.+....++|+|.. .+..||+.. ...+.+...+...+++..+.+.++++++|++++.+..||
T Consensus 570 q~v~FHPs~p~lfVaTq~-~vRiYdL~k--qelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfD 635 (733)
T KOG0650|consen 570 QRVKFHPSKPYLFVATQR-SVRIYDLSK--QELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFD 635 (733)
T ss_pred eEEEecCCCceEEEEecc-ceEEEehhH--HHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEE
Confidence 334455555778998864 599999775 554444444555567888888899999999999999999
No 299
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=98.24 E-value=9.7e-05 Score=72.24 Aligned_cols=270 Identities=11% Similarity=0.127 Sum_probs=159.9
Q ss_pred CCceEEEEecCCCeEEEEECCC------------CcEE------EE-EecCCceeeceeEecCCCEEEEEeeCCEEEEEE
Q 002615 555 DSDIYLFVGSHSHKFICADAKR------------SSVL------WE-IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~t------------G~~~------w~-~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
.++..+..|+.|-.|..+|... |... .. +..-+. .....+.+....+..|+.|++|..||
T Consensus 122 ~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~de-vn~l~FHPre~ILiS~srD~tvKlFD 200 (430)
T KOG0640|consen 122 PDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDE-VNDLDFHPRETILISGSRDNTVKLFD 200 (430)
T ss_pred CCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCc-ccceeecchhheEEeccCCCeEEEEe
Confidence 3566778889999999999751 1100 00 000111 23445666666788899999999999
Q ss_pred CCCCcEEEEEe--cCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc---cccCceeeccCCEEEE-E
Q 002615 616 YLTGDIYWTFQ--TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS---IFGSPAIDEVHDVLYV-A 689 (900)
Q Consensus 616 ~~tG~~~w~~~--~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~---~~~~~~~~~~~~~l~v-~ 689 (900)
...-..+.-++ ......-+..+.+.+..|.+|+.-..+..||.++-++.-....... -+...-+.. .+.+|+ +
T Consensus 201 fsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTa 279 (430)
T KOG0640|consen 201 FSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-TGSLYVTA 279 (430)
T ss_pred cccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecC-CccEEEEe
Confidence 65433222111 1223334456778889999999888999999998777644332211 122222333 355555 7
Q ss_pred eCCCcEEEEEcCCCCceeeeEeec--CCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC----ceeccc
Q 002615 690 STSGRLTAISVKALPFHTLWLHEL--EVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG----PIFAGP 762 (900)
Q Consensus 690 t~~g~l~~~~~~~~~g~~~w~~~~--~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~----~~~~~~ 762 (900)
+.+|.+..||--+ ++.+-++.. ++...-+..+..++.++...+.|..+..|. .+|..+-++...+ ..+...
T Consensus 280 SkDG~IklwDGVS--~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtq 357 (430)
T KOG0640|consen 280 SKDGAIKLWDGVS--NRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQ 357 (430)
T ss_pred ccCCcEEeecccc--HHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhh
Confidence 7899999999544 555444322 122234445566677888888899999999 8898887765332 223333
Q ss_pred cccccCCCeEEEEe-eCCeEEEEeCCCCcee--eEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 763 CTSFALPSQVLICS-RNGSIYSFEQESGNLL--WEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 763 ~~~~~~~~~l~~g~-~dg~l~~~d~~tG~~~--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
.+....++.+++.. ..+.+.+||..++..+ |.....+.+ -.++. .+.+.-+..|+.|-..+.|..
T Consensus 358 AvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~--R~i~H----------SP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 358 AVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAV--RWIVH----------SPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred hhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCc--eEEEe----------CCCCCceeeecccceeeeeee
Confidence 34444455555553 3577999999887653 443322221 11111 112455677777877777754
Q ss_pred e
Q 002615 840 N 840 (900)
Q Consensus 840 ~ 840 (900)
+
T Consensus 426 r 426 (430)
T KOG0640|consen 426 R 426 (430)
T ss_pred c
Confidence 3
No 300
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.24 E-value=4.7e-05 Score=72.51 Aligned_cols=229 Identities=16% Similarity=0.085 Sum_probs=132.7
Q ss_pred CceEEEEecCCCeEEEEECCC-CcEEEEEecCCceeeceeEe-cCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKR-SSVLWEIKLEGRIECSAAVL-ADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~-~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
.+..+++++.||.+..||..- -+++-.++-+.+-..++-.. ..+..+++++.||+|..|++.-++-+-+|..+.....
T Consensus 72 ~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 72 HENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred CcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEE
Confidence 466788889999999999321 12232333333211122221 2334577789999999999888888888887777777
Q ss_pred eeeEeCCC-CEEEEecCCCeEEEEECCC-CeEEEeeccCC-ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 634 QPVVDAPR-QLIWCGSHDHNLYALDFRN-YRCVYKLPCGG-SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 634 ~~~~~~~~-~~i~~gs~dg~l~~~d~~~-g~~~w~~~~~~-~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
...+.+.. +.+...|.|+++..||.+. |+.+- +..+. .+.+.--..-+...++.|..++.++.||+.+- -.++..
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-r~pl~e 229 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-RTPLFE 229 (311)
T ss_pred EEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhc-ccccee
Confidence 77777654 4455678899999999764 44443 43333 22222222233567888899999999998861 123333
Q ss_pred eecCCcceeeeeeeeC-CCEEEEEeecCcEEEEC-CCC-CEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeC
Q 002615 711 HELEVPAFASLCITSA-NRHVICCLVDGHVVALD-SSG-SIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~-~~~i~~~~~~g~v~~~d-~~G-~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~ 786 (900)
...+.-.......++. ...+..+++|-++..+| ..+ ..+-++..........-.+....+.+...+.|+.+|+|++
T Consensus 230 L~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 230 LNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 3222211111122211 23566678888888888 322 1221222111111111112224567777788999999985
No 301
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=98.23 E-value=0.00012 Score=71.66 Aligned_cols=238 Identities=17% Similarity=0.178 Sum_probs=139.5
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCC------------CcE------EEEEecCCceeeeeeEeCCCCEEEEecCCCeE
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLT------------GDI------YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNL 653 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~t------------G~~------~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l 653 (900)
.+.++.||..+..|+.|..|..+|.+- |.. +.++--+..-.....+.+....+..|+.|+++
T Consensus 117 ~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tv 196 (430)
T KOG0640|consen 117 AAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTV 196 (430)
T ss_pred eeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeE
Confidence 467888888888899999999998651 111 00110111112334566666778889999999
Q ss_pred EEEECCCCeEEEeecc--CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC---cceeeeeeeeCCC
Q 002615 654 YALDFRNYRCVYKLPC--GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV---PAFASLCITSANR 728 (900)
Q Consensus 654 ~~~d~~~g~~~w~~~~--~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~---~~~~s~~~~~~~~ 728 (900)
..+|...-.....++. .-...-+..+.+.++.|++||....+..||.++ .+..-.-.... ..+........+.
T Consensus 197 KlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T--~QcfvsanPd~qht~ai~~V~Ys~t~~ 274 (430)
T KOG0640|consen 197 KLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT--YQCFVSANPDDQHTGAITQVRYSSTGS 274 (430)
T ss_pred EEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc--eeEeeecCcccccccceeEEEecCCcc
Confidence 9999764322221211 122233445566688999999999999999987 54433322111 1122333444455
Q ss_pred EEEEEeecCcEEEEC-CCCCEEeeecC--CCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCc----e
Q 002615 729 HVICCLVDGHVVALD-SSGSIIWRCRT--GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDP----I 801 (900)
Q Consensus 729 ~i~~~~~~g~v~~~d-~~G~~~w~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~----~ 801 (900)
..+.++.||.|..|| .+++.+-++.. ++.-.++. +....+..|+....|..++.|...+|..+-.|.-.+. .
T Consensus 275 lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa-~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~ 353 (430)
T KOG0640|consen 275 LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSA-VFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK 353 (430)
T ss_pred EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeE-EEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchh
Confidence 556688999999999 77766544432 22222221 1122234566667788999999999998876643211 1
Q ss_pred ecccccccccccccccccCCCeEEEEEc-CCCcEEEEEeecC
Q 002615 802 TASAYIDEHLQLKLESCLSIDRLVCICT-SSGSIHILRVNLD 842 (900)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~~G~v~~~d~~~~ 842 (900)
..+-.+++. .+.++..-. ..+.+..||.++.
T Consensus 354 ~rtqAvFNh----------tEdyVl~pDEas~slcsWdaRta 385 (430)
T KOG0640|consen 354 HRTQAVFNH----------TEDYVLFPDEASNSLCSWDARTA 385 (430)
T ss_pred hhhhhhhcC----------ccceEEccccccCceeeccccch
Confidence 111111110 044444433 4678999999876
No 302
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=98.23 E-value=0.00012 Score=78.77 Aligned_cols=275 Identities=14% Similarity=0.085 Sum_probs=149.6
Q ss_pred CceEEEEecCCCeEEEEECCCCcEE------EEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEE--Eec
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVL------WEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWT--FQT 627 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~------w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~--~~~ 627 (900)
....++++..+|.|..+|...-+.. .....+.....-....+....++..+.|.++.+||.+++++.-. +..
T Consensus 63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G 142 (720)
T KOG0321|consen 63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG 142 (720)
T ss_pred ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecc
Confidence 4678999999999999997754443 11122222222233344555677788899999999998877543 222
Q ss_pred C-CceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeE-----------------------------EEeeccCCccccC
Q 002615 628 C-GEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRC-----------------------------VYKLPCGGSIFGS 676 (900)
Q Consensus 628 ~-~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~-----------------------------~w~~~~~~~~~~~ 676 (900)
+ +.+++. ++... ...+.+|+.||.+..||..-... .|+. ..+.+.++
T Consensus 143 H~~SvkS~-cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA-~s~ti~ss 220 (720)
T KOG0321|consen 143 HTGSVKSE-CFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA-ASNTIFSS 220 (720)
T ss_pred cccccchh-hhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc-ccCceeee
Confidence 2 333333 34333 34556689999999999752110 0110 01233332
Q ss_pred --ceeeccCCEEEEEeC-CCcEEEEEcCCCCceeeeEe------ecCC-----cceeeeeeeeCCCEEEEEeecCcEEEE
Q 002615 677 --PAIDEVHDVLYVAST-SGRLTAISVKALPFHTLWLH------ELEV-----PAFASLCITSANRHVICCLVDGHVVAL 742 (900)
Q Consensus 677 --~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~~w~~------~~~~-----~~~~s~~~~~~~~~i~~~~~~g~v~~~ 742 (900)
.++-.++..|..++. |+.+..||+.. -....+. .... ..+.+......+.++|+.+.|+.||+|
T Consensus 221 vTvv~fkDe~tlaSaga~D~~iKVWDLRk--~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~y 298 (720)
T KOG0321|consen 221 VTVVLFKDESTLASAGAADSTIKVWDLRK--NYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFY 298 (720)
T ss_pred eEEEEEeccceeeeccCCCcceEEEeecc--cccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEE
Confidence 122223466666665 89999999875 2211111 1111 112344445557899999999999999
Q ss_pred C-CCC--CEEeeecC--CCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccccccccccc
Q 002615 743 D-SSG--SIIWRCRT--GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLES 817 (900)
Q Consensus 743 d-~~G--~~~w~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 817 (900)
| ..- .++..+.. ....+.-. ...-.+..+..|+.|...|.|...+-+.--....++....+... -
T Consensus 299 nm~s~s~sP~~~~sg~~~~sf~vks-~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~---------w 368 (720)
T KOG0321|consen 299 NMRSLSISPVAEFSGKLNSSFYVKS-ELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVR---------W 368 (720)
T ss_pred eccccCcCchhhccCcccceeeeee-ecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEe---------e
Confidence 9 321 22222211 00111110 11223557888899999999887664321111112211110000 0
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecCcc
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLDVT 844 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~~~ 844 (900)
+.....-++.+++|-++.+|+..++..
T Consensus 369 ~pS~~t~v~TcSdD~~~kiW~l~~~l~ 395 (720)
T KOG0321|consen 369 LPSATTPVATCSDDFRVKIWRLSNGLE 395 (720)
T ss_pred ccccCCCceeeccCcceEEEeccCchh
Confidence 011144567778999999999976643
No 303
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.21 E-value=0.0001 Score=85.13 Aligned_cols=246 Identities=18% Similarity=0.131 Sum_probs=140.2
Q ss_pred ceeEecC-CCEEEEEeeCCEEEEEECCC--Cc---E--EEEEe-cCCceeeeeeEeCCCCEEEEecCCCeEEEEECCC--
Q 002615 592 SAAVLAD-FSQVVVGCYKGKIYFLDYLT--GD---I--YWTFQ-TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRN-- 660 (900)
Q Consensus 592 ~~~~~~~-~~~i~vg~~dg~l~~~d~~t--G~---~--~w~~~-~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~-- 660 (900)
..+++.+ +.+.+.|+.||+|..||... |+ . .-++. .++.+.. ......+..+.+++.||.+..++...
T Consensus 1053 k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~-vt~~~~~~~~Av~t~DG~v~~~~id~~~ 1131 (1431)
T KOG1240|consen 1053 KLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEK-VTMCGNGDQFAVSTKDGSVRVLRIDHYN 1131 (1431)
T ss_pred ceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEE-EEeccCCCeEEEEcCCCeEEEEEccccc
Confidence 3444444 47888899999999999653 22 1 11222 2223332 33344567788889999888776654
Q ss_pred Ce-----EEEeecc--CCccccC---ceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC--CcceeeeeeeeCCC
Q 002615 661 YR-----CVYKLPC--GGSIFGS---PAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE--VPAFASLCITSANR 728 (900)
Q Consensus 661 g~-----~~w~~~~--~~~~~~~---~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~--~~~~~s~~~~~~~~ 728 (900)
++ +..+.+. .|.+... ..... ...|..+|..+++..||+.. -...|+.+.. .....+.++.....
T Consensus 1132 ~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~-S~~lvy~T~~~~iv~~D~r~--~~~~w~lk~~~~hG~vTSi~idp~~~ 1208 (1431)
T KOG1240|consen 1132 VSKRVATQVRIPNLKKDGVVVSMHAFTAIVQ-SHVLVYATDLSRIVSWDTRM--RHDAWRLKNQLRHGLVTSIVIDPWCN 1208 (1431)
T ss_pred cccceeeeeecccccCCCceEEeeccccccc-ceeEEEEEeccceEEecchh--hhhHHhhhcCccccceeEEEecCCce
Confidence 21 1111111 2222211 11122 13677788889999999887 7788987654 33456667777777
Q ss_pred EEEEEeecCcEEEEC-CCCCEE--eeecCCCceeccccccccC-CC-eEEEEe-eCCeEEEEeCCCCceeeEEecCC--c
Q 002615 729 HVICCLVDGHVVALD-SSGSII--WRCRTGGPIFAGPCTSFAL-PS-QVLICS-RNGSIYSFEQESGNLLWEYSVGD--P 800 (900)
Q Consensus 729 ~i~~~~~~g~v~~~d-~~G~~~--w~~~~~~~~~~~~~~~~~~-~~-~l~~g~-~dg~l~~~d~~tG~~~w~~~~~~--~ 800 (900)
.+++|+..|.+.+|| .=+.++ |+++...++--..+-.... +. .+..+. ..+.|..|+..+|.-...+-... +
T Consensus 1209 WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p 1288 (1431)
T KOG1240|consen 1209 WLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAP 1288 (1431)
T ss_pred EEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCc
Confidence 899999999999999 655554 7776554432211111111 12 233343 56789999999885432222221 1
Q ss_pred e--ecccccc--ccccccc--ccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 801 I--TASAYID--EHLQLKL--ESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 801 ~--~~~~~~~--~~~~~~~--~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
. +..|.-+ .-..+.+ ......++.++.|++|++|+.||...
T Consensus 1289 ~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1289 ILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred chhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 0 1111110 0001111 11233478899999999999999854
No 304
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.20 E-value=4.2e-05 Score=87.46 Aligned_cols=329 Identities=17% Similarity=0.195 Sum_probs=188.0
Q ss_pred ccCCCCCCcEEEEccCcchHhHH-HHHHHHHHhCCeEEecCchhhhhcHHHHHHHHHHcCeeEEEecHHHHHHHHHHHhh
Q 002615 3 DLYPLHGEELLLFKTSISFIDHL-QEFLSAILTACTLVVPPIIELKKNLISIIHFLQAYSISRLTTVPSLMRVVLPALQS 81 (900)
Q Consensus 3 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~~~~~~~~l~~~~vt~~~~~Ps~l~~l~~~~~~ 81 (900)
..+++..+++++.....+-..|+ ..++.+|++|.|.+-.| .+....|..+.+++.+++.+++..=-.-|.........
T Consensus 303 ~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p-~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~ 381 (1363)
T KOG3628|consen 303 HVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCP-KEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQE 381 (1363)
T ss_pred hccccCcccceeeccCcccccchhhhhhhhhhcCceeecCc-hhhcCCCcchhhhhccceeEEEeecccccCcccccccC
Confidence 35667778888777766666555 34889999999999984 55667888999999999999887654444333221111
Q ss_pred ---------ccCCCCCCCcCEEEEeccCCChhhHHH----HHhhCCCceEEeec-----------------Ccccccccc
Q 002615 82 ---------QHNMHVPSSLKLLVLSGEVLPLSMWDI----ISKLFPNISILNLY-----------------GSTEVSGDC 131 (900)
Q Consensus 82 ---------~~~~~~~~~lr~v~~gGe~l~~~~~~~----~~~~~~~~~l~~~Y-----------------G~TE~~~~~ 131 (900)
.....++++||.+++.-+.+..+..+. |.+-+......-.| +++|.+...
T Consensus 382 ~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~ 461 (1363)
T KOG3628|consen 382 DPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVS 461 (1363)
T ss_pred CcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhccc
Confidence 111245789999999999988764433 33312111111122 224444332
Q ss_pred ceecccCC---cc--c----------------cccCCCCcceeeeccC-CcEEEEecCCC----CCCCccEEEEcccccc
Q 002615 132 TYFDCKRL---PS--I----------------LEMSTLKSVPIGLPIS-NCDIVLVESDT----VKPDEGEIYAGGLCLS 185 (900)
Q Consensus 132 ~~~~~~~~---~~--~----------------~~~~~~~~~~~G~p~~-~~~~~i~d~~~----~~~~~GEl~v~g~~~~ 185 (900)
...+.... +. . ........-.+|.-.+ +..+.+++++. ..++.|||||.++++.
T Consensus 462 ~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~ 541 (1363)
T KOG3628|consen 462 IRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLG 541 (1363)
T ss_pred ccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcc
Confidence 22111000 00 0 0000011112333333 34455565554 3467899999999999
Q ss_pred ccccCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccCCcEEEEcccCCcE-EECceeeChHHH--------
Q 002615 186 NGYFSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQSGDLVFLGRKDRTI-KINGQRMALEEI-------- 256 (900)
Q Consensus 186 ~gY~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~l~~~GR~dd~i-k~~G~rv~~~~i-------- 256 (900)
.+|+.-+..|...|...+.... ........+.|||=+|.+++ |.++++|-++|++ .+.|.+.+..+|
T Consensus 542 ~~~~al~~~t~~~F~~~~~~s~---~~~~~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~ 617 (1363)
T KOG3628|consen 542 KLFYALDKQTENTFKATPVESS---GKPPSNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVE 617 (1363)
T ss_pred cceeeccccccceEEeeecccc---CCCCccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHH
Confidence 9999988888888866544321 12233467889999998775 5566666555554 458888776554
Q ss_pred --HHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCchH--HHHHHHHHHHHhh--CCCCccCCEEEEcCCcCCCC
Q 002615 257 --EHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTSSE--IFLSSIKSWVSSK--LPLAMIPNRFVFMDSLPMTS 330 (900)
Q Consensus 257 --E~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~~~--~~~~~l~~~l~~~--l~~~~~P~~~~~v~~lP~t~ 330 (900)
+.+.+..+.|-++.++-. +.+++.++-++.....+ +...++-+.+... +..|.+ .++.-+.||||+
T Consensus 618 ~iktV~R~v~~VF~~saf~~------E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCi--livP~~tLPrt~ 689 (1363)
T KOG3628|consen 618 LIKTVMRGVIAVFDVSAFED------EHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCI--LIVPANTLPRTP 689 (1363)
T ss_pred HHHHHHhccceEEEEeeeec------ceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEE--EEeccccCCCcc
Confidence 344556677888877751 23333333333221111 1122222222221 222221 244456799999
Q ss_pred CCCcchhhhccccc
Q 002615 331 SGKVDYASLSASTS 344 (900)
Q Consensus 331 ~GKidr~~L~~~~~ 344 (900)
-|-|.-.++++.+.
T Consensus 690 ~~Gi~~~~~k~~F~ 703 (1363)
T KOG3628|consen 690 LGGIHNNECKQAFL 703 (1363)
T ss_pred ccccccHHHHHHHH
Confidence 77788777765543
No 305
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=98.20 E-value=0.00045 Score=68.29 Aligned_cols=185 Identities=15% Similarity=0.145 Sum_probs=119.3
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecC---Cce--eeeeeEeCCCCEEEEecCCCeEEEEEC-CCCeEE--EeeccC-
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTC---GEV--KCQPVVDAPRQLIWCGSHDHNLYALDF-RNYRCV--YKLPCG- 670 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~---~~~--~~~~~~~~~~~~i~~gs~dg~l~~~d~-~~g~~~--w~~~~~- 670 (900)
.++.+.+.+.-|..||+-||+..-.+..- +++ ..+..+.+++..||+|- ...|..+|. +.|..- ......
T Consensus 124 ~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~ 202 (406)
T KOG2919|consen 124 NLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKG 202 (406)
T ss_pred ceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcc
Confidence 34556667888999999999998765432 222 23456777888888874 667999998 555321 111111
Q ss_pred ----CccccCceeeccC-CEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC-
Q 002615 671 ----GSIFGSPAIDEVH-DVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLV-DGHVVALD- 743 (900)
Q Consensus 671 ----~~~~~~~~~~~~~-~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d- 743 (900)
..+++..++.+.. ..+.+++....+-.|+-.. +.++.....+...+.......+++.+|+|.. +..|.+||
T Consensus 203 k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~--~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDi 280 (406)
T KOG2919|consen 203 KFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG--RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDI 280 (406)
T ss_pred cccccceeeeeeccCCCCcceeeecccceeeeEecCC--CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEee
Confidence 2344444444432 4677888777666666444 6677666555555666777888999999874 67899999
Q ss_pred -CCCCEEeeecC-----CCceeccccccccCCCeEEEEeeCCeEEEEeCCC-Cc
Q 002615 744 -SSGSIIWRCRT-----GGPIFAGPCTSFALPSQVLICSRNGSIYSFEQES-GN 790 (900)
Q Consensus 744 -~~G~~~w~~~~-----~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t-G~ 790 (900)
..+.++|.+.. +..|+.-. ...++.|..|+.+|.|.+||.++ |.
T Consensus 281 R~~~~pv~~L~rhv~~TNQRI~FDl---d~~~~~LasG~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 281 RYSRDPVYALERHVGDTNQRILFDL---DPKGEILASGDTDGSVRVWDLKDLGN 331 (406)
T ss_pred hhccchhhhhhhhccCccceEEEec---CCCCceeeccCCCccEEEEecCCCCC
Confidence 57777776532 22232221 12244566667899999999887 65
No 306
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.18 E-value=0.00072 Score=70.27 Aligned_cols=215 Identities=20% Similarity=0.194 Sum_probs=120.3
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEE-EEEecC-Cceee-
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIY-WTFQTC-GEVKC- 633 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~-w~~~~~-~~~~~- 633 (900)
+..+|+--..+.|+.||+.+|+.. .+..++.+. +......++ ..++|..| ++.++.++|..+ -..... +....
T Consensus 37 ~~L~w~DI~~~~i~r~~~~~g~~~-~~~~p~~~~-~~~~~d~~g-~Lv~~~~g-~~~~~~~~~~~~t~~~~~~~~~~~~r 112 (307)
T COG3386 37 GALLWVDILGGRIHRLDPETGKKR-VFPSPGGFS-SGALIDAGG-RLIACEHG-VRLLDPDTGGKITLLAEPEDGLPLNR 112 (307)
T ss_pred CEEEEEeCCCCeEEEecCCcCceE-EEECCCCcc-cceeecCCC-eEEEEccc-cEEEeccCCceeEEeccccCCCCcCC
Confidence 445788778899999999988653 344455443 333333333 44455555 777787766652 111111 11111
Q ss_pred --eeeEeCCCCEEEEecCC------------CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-CCcEEEE
Q 002615 634 --QPVVDAPRQLIWCGSHD------------HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SGRLTAI 698 (900)
Q Consensus 634 --~~~~~~~~~~i~~gs~d------------g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~~~ 698 (900)
-..++ ..+.+|+++.. |.||.+|+. |..+.....+-.+....++++++..+|++-. .+.++++
T Consensus 113 ~ND~~v~-pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~-g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 113 PNDGVVD-PDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD-GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCceeEc-CCCCEEEeCCCccccCccccCCcceEEEEcCC-CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 11233 34778988655 458999874 4333333222334456677777778888765 4788888
Q ss_pred EcCCCCcee----eeEeecCCcceeeeeeeeCCCEEEEEeecC--cEEEECCCCCEEeeecCCCceeccccccccCCCeE
Q 002615 699 SVKALPFHT----LWLHELEVPAFASLCITSANRHVICCLVDG--HVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQV 772 (900)
Q Consensus 699 ~~~~~~g~~----~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g--~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l 772 (900)
+.....|.. .+......+..........++++|++...+ .|.+|+.+|+++-++..+....+.++..-..-+.|
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L 270 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRPTNPAFGGPDLNTL 270 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCCccceEeCCCcCEE
Confidence 776311221 111111111222223445678999655543 89999966999888877654444443322223566
Q ss_pred EEEee
Q 002615 773 LICSR 777 (900)
Q Consensus 773 ~~g~~ 777 (900)
|+.+.
T Consensus 271 ~iTs~ 275 (307)
T COG3386 271 YITSA 275 (307)
T ss_pred EEEec
Confidence 66653
No 307
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=98.12 E-value=0.00015 Score=71.61 Aligned_cols=188 Identities=15% Similarity=0.079 Sum_probs=123.2
Q ss_pred eEEEEe-cCCCeEEEEECCCCcEEEEEecCC---ce--eeceeEecCCCEEEEEeeCCEEEEEEC-CCCcEEEEEec--C
Q 002615 558 IYLFVG-SHSHKFICADAKRSSVLWEIKLEG---RI--ECSAAVLADFSQVVVGCYKGKIYFLDY-LTGDIYWTFQT--C 628 (900)
Q Consensus 558 ~~v~ig-s~~g~l~~~d~~tG~~~w~~~~~~---~~--~~~~~~~~~~~~i~vg~~dg~l~~~d~-~tG~~~w~~~~--~ 628 (900)
..+|.. +.+.-|..||+-||+.+-.+..-+ ++ ..+..+++||.+||+| +...|..||. +.|...-.+.+ .
T Consensus 123 t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~ 201 (406)
T KOG2919|consen 123 TNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTK 201 (406)
T ss_pred cceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhc
Confidence 344444 456679999999999887765432 21 2367899999999988 5778999998 66754322221 1
Q ss_pred -----CceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-CCcEEEEEcC
Q 002615 629 -----GEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SGRLTAISVK 701 (900)
Q Consensus 629 -----~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~ 701 (900)
..+.++..+.+. .+.+.+|++..++-.+.-..+.++......+.-+.......+++.+|+|.. +..|.+||++
T Consensus 202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIR 281 (406)
T ss_pred ccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeeh
Confidence 234455555553 456788988877666655566777665554444555556666789999885 5679999998
Q ss_pred CCCceeeeEeecCCcc---eeeeeeeeCCCEEEEEeecCcEEEEC-CC-CC
Q 002615 702 ALPFHTLWLHELEVPA---FASLCITSANRHVICCLVDGHVVALD-SS-GS 747 (900)
Q Consensus 702 ~~~g~~~w~~~~~~~~---~~s~~~~~~~~~i~~~~~~g~v~~~d-~~-G~ 747 (900)
. .+.++|....+... ..-..+.+.+..+..|..+|.|.+|| ++ |.
T Consensus 282 ~-~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 282 Y-SRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN 331 (406)
T ss_pred h-ccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCC
Confidence 5 46778876544321 11112334456677777899999999 54 55
No 308
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.12 E-value=0.0021 Score=71.68 Aligned_cols=218 Identities=12% Similarity=0.080 Sum_probs=125.4
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee---CCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY---KGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~---dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
.|+.+|.+.+... .+..+.....++.+++||..++..+. +..||.+|..+|+........+. ...+.+++++..|
T Consensus 180 ~l~~~d~dg~~~~-~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~-~~~~~~SPDG~~L 257 (429)
T PRK03629 180 ELRVSDYDGYNQF-VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH-NGAPAFSPDGSKL 257 (429)
T ss_pred eEEEEcCCCCCCE-EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCC-cCCeEECCCCCEE
Confidence 6888887654432 22223334567899999987766543 34799999998876543333332 3457788877766
Q ss_pred EEe-cCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC---cEEEEEcCCCCceeeeEeecCCcce
Q 002615 645 WCG-SHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG---RLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 645 ~~g-s~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g---~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
++. +.+| .||.+|.++|+...... +......+...+++..|++.+..+ .+|.+|+++ |+.. +........
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~~lt~-~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~--g~~~-~lt~~~~~~ 333 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING--GAPQ-RITWEGSQN 333 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEccC-CCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC--CCeE-EeecCCCCc
Confidence 654 4344 59999999887654333 233455677777677777666543 677788775 4432 222222222
Q ss_pred eeeeeeeCCCEEEEEeec---CcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCe---EEEEeCCCCce
Q 002615 719 ASLCITSANRHVICCLVD---GHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGS---IYSFEQESGNL 791 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~---g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~---l~~~d~~tG~~ 791 (900)
..+.+.+++..++....+ ..++.+| .+|+.. .+..... ...|... .++..|++.+.++. ++.++. +|..
T Consensus 334 ~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~-~~~p~~S-pDG~~i~~~s~~~~~~~l~~~~~-~G~~ 409 (429)
T PRK03629 334 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFL-DETPSIA-PNGTMVIYSSSQGMGSVLNLVST-DGRF 409 (429)
T ss_pred cCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCC-CCCceEC-CCCCEEEEEEcCCCceEEEEEEC-CCCC
Confidence 345666777777665433 3477888 666543 2221111 1122222 12445666666553 666775 4555
Q ss_pred eeEE
Q 002615 792 LWEY 795 (900)
Q Consensus 792 ~w~~ 795 (900)
...+
T Consensus 410 ~~~l 413 (429)
T PRK03629 410 KARL 413 (429)
T ss_pred eEEC
Confidence 4443
No 309
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.08 E-value=0.00097 Score=74.62 Aligned_cols=218 Identities=17% Similarity=0.172 Sum_probs=126.5
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
.|+.+|...+... .+..+.....++.+++++..|+..+++ ..||.+|..+|+........ .....+.+.+++..|
T Consensus 185 ~l~i~D~~g~~~~-~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~-g~~~~~~~SpDG~~l 262 (433)
T PRK04922 185 ALQVADSDGYNPQ-TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR-GINGAPSFSPDGRRL 262 (433)
T ss_pred EEEEECCCCCCce-EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-CCccCceECCCCCEE
Confidence 5888887644443 333333334578889998888877643 36999999988765433222 234466777777766
Q ss_pred EE-ecCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-CC--cEEEEEcCCCCceeeeEeecCCcce
Q 002615 645 WC-GSHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SG--RLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 645 ~~-gs~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g--~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
++ .+.+| .||.+|..+|+... ..........+...+++..+++.+. +| .+|.+|.++ ++... ........
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~--g~~~~-lt~~g~~~ 338 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQLTR-LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG--GSAER-LTFQGNYN 338 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC--CCeEE-eecCCCCc
Confidence 54 44444 59999999887643 3333334456777776677777664 33 488888775 44321 21222222
Q ss_pred eeeeeeeCCCEEEEEeecC---cEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeC---CeEEEEeCCCCce
Q 002615 719 ASLCITSANRHVICCLVDG---HVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRN---GSIYSFEQESGNL 791 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~g---~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~l~~~d~~tG~~ 791 (900)
..+.+.++++.++..+.++ .|+.+| .+|+.. .+..+.. ...+... .++..|++.+.+ +.|+.++.+ |..
T Consensus 339 ~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~-~~~p~~s-pdG~~i~~~s~~~g~~~L~~~~~~-g~~ 414 (433)
T PRK04922 339 ARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSL-DESPSFA-PNGSMVLYATREGGRGVLAAVSTD-GRV 414 (433)
T ss_pred cCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCC-CCCceEC-CCCCEEEEEEecCCceEEEEEECC-CCc
Confidence 3566777788877765433 588888 677654 3322211 1122211 123445555542 358888864 444
Q ss_pred eeEE
Q 002615 792 LWEY 795 (900)
Q Consensus 792 ~w~~ 795 (900)
...+
T Consensus 415 ~~~l 418 (433)
T PRK04922 415 RQRL 418 (433)
T ss_pred eEEc
Confidence 4433
No 310
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=98.07 E-value=4e-05 Score=81.11 Aligned_cols=260 Identities=11% Similarity=0.085 Sum_probs=140.9
Q ss_pred ccccccccccc--ccccccceEEeeCCceEEEEecCCCeEEEEECCC--------CcEEEEEecCCceeeceeEecCCCE
Q 002615 532 FIQELWKVHME--SCVDASPLVVLKDSDIYLFVGSHSHKFICADAKR--------SSVLWEIKLEGRIECSAAVLADFSQ 601 (900)
Q Consensus 532 ~~~~~W~~~~~--~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~t--------G~~~w~~~~~~~~~~~~~~~~~~~~ 601 (900)
.+++.|...+. ...++.-...+......++.++.+|.|..|++.. =+.+|.+..+.....+.++..++..
T Consensus 279 a~~k~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~ 358 (577)
T KOG0642|consen 279 AFTKKWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEH 358 (577)
T ss_pred hhheecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceE
Confidence 45666876542 2222222222334567789999999999898821 2467888877665567888888899
Q ss_pred EEEEeeCCEEEEEECC------CCc---E-EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc--
Q 002615 602 VVVGCYKGKIYFLDYL------TGD---I-YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-- 669 (900)
Q Consensus 602 i~vg~~dg~l~~~d~~------tG~---~-~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-- 669 (900)
+|.|+.||.|.+|+.. +.- . .-.+..+........+......|...+.||+++.|++....+ ..+..
T Consensus 359 ~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~ 437 (577)
T KOG0642|consen 359 CYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPK 437 (577)
T ss_pred EEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCcc
Confidence 9999999999999432 211 0 011122222233334555566788888999999998766544 11111
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEE-eecCcEEEECCCCCE
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICC-LVDGHVVALDSSGSI 748 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~-~~~g~v~~~d~~G~~ 748 (900)
...+-.+.-... -.+.....+..+..+.+.+ .+. .....+.. +...+...++.-+++
T Consensus 438 e~g~Plsvd~~s--s~~a~~~~s~~~~~~~~~~--~ev------------------~s~~~~~~s~~~~~~~~~~~in~v 495 (577)
T KOG0642|consen 438 EHGYPLSVDRTS--SRPAHSLASFRFGYTSIDD--MEV------------------VSDLLIFESSASPGPRRYPQINKV 495 (577)
T ss_pred ccCCcceEeecc--chhHhhhhhcccccccchh--hhh------------------hhheeeccccCCCcccccCccceE
Confidence 110000000000 0000000011111111111 000 00111111 112222222222233
Q ss_pred EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEE
Q 002615 749 IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCIC 828 (900)
Q Consensus 749 ~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 828 (900)
+|. + ..+..|.+-.|+.+..+|..+|+++.....+-...++..++.+ +.++..+
T Consensus 496 Vs~----------~-----~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~n-----------g~~l~s~ 549 (577)
T KOG0642|consen 496 VSH----------P-----TADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPN-----------GPYLMSG 549 (577)
T ss_pred Eec----------C-----CCCeeEecccCCceecccccccccchheeeccceecceeecCC-----------CceEEee
Confidence 332 1 1235566667899999999999998876666555555555543 8899999
Q ss_pred cCCCcEEEEEee
Q 002615 829 TSSGSIHILRVN 840 (900)
Q Consensus 829 ~~~G~v~~~d~~ 840 (900)
+.||.+..|...
T Consensus 550 s~d~sv~l~kld 561 (577)
T KOG0642|consen 550 SHDGSVRLWKLD 561 (577)
T ss_pred cCCceeehhhcc
Confidence 999999998765
No 311
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.07 E-value=0.00043 Score=70.30 Aligned_cols=197 Identities=10% Similarity=0.110 Sum_probs=128.6
Q ss_pred CCEEEEEeeCCEEEEEECCCC-----cEEEEEecCCceeeeeeEeCCCCEEEEecCC--CeEEEEECCCCeEEEeeccCC
Q 002615 599 FSQVVVGCYKGKIYFLDYLTG-----DIYWTFQTCGEVKCQPVVDAPRQLIWCGSHD--HNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 599 ~~~i~vg~~dg~l~~~d~~tG-----~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~d--g~l~~~d~~~g~~~w~~~~~~ 671 (900)
++.+..+..+|.+..+..+.+ ++.|.. ++......--.+...+.+.+|+.. ..+-.||.++.+.+|..++-.
T Consensus 115 dg~Litc~~sG~l~~~~~k~~d~hss~l~~la-~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvp 193 (412)
T KOG3881|consen 115 DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLA-TGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVP 193 (412)
T ss_pred CCEEEEEecCCcEEEEeccCCccccccceeee-cCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCC
Confidence 357888888999999987744 344432 333222111122233455557777 779999999999999876521
Q ss_pred --------ccc-cCceeecc--CCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEE
Q 002615 672 --------SIF-GSPAIDEV--HDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVV 740 (900)
Q Consensus 672 --------~~~-~~~~~~~~--~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~ 740 (900)
+++ ....+.+. ...+..+|..+.+..||+.. .-.++-++.......++....++++.||+|...|.+.
T Consensus 194 nD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~-qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~ 272 (412)
T KOG3881|consen 194 NDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRH-QRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLA 272 (412)
T ss_pred CccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcc-cCcceeEeccccCcceeeeecCCCcEEEEecccchhh
Confidence 222 22222222 35678888999999999885 2356777777777778888888999999999999999
Q ss_pred EEC-CCCCEEee-ec-CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCC
Q 002615 741 ALD-SSGSIIWR-CR-TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGD 799 (900)
Q Consensus 741 ~~d-~~G~~~w~-~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~ 799 (900)
.|| ..|+..-. +. ..+.+.+..| ......+..++-|..|.++|.++.+++.+..+.+
T Consensus 273 ~FD~r~~kl~g~~~kg~tGsirsih~--hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs 332 (412)
T KOG3881|consen 273 KFDLRGGKLLGCGLKGITGSIRSIHC--HPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKS 332 (412)
T ss_pred eecccCceeeccccCCccCCcceEEE--cCCCceEEeeccceeEEEeecccchhhhhhhhhc
Confidence 999 77766533 22 1122222211 1122357777889999999999977766544443
No 312
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.07 E-value=0.0016 Score=72.76 Aligned_cols=219 Identities=16% Similarity=0.065 Sum_probs=122.0
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|.+.+.. .....+.....++.+++++..++..+++ ..||.||..+|+........+ ....+.+.+++..
T Consensus 184 ~~i~i~d~dg~~~-~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g-~~~~~~wSPDG~~ 261 (429)
T PRK01742 184 YEVRVADYDGFNQ-FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG-HNGAPAFSPDGSR 261 (429)
T ss_pred EEEEEECCCCCCc-eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC-ccCceeECCCCCE
Confidence 5788888764443 2333333344578999999888776654 369999999887543322222 2335677877777
Q ss_pred EEEe-cCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEe-CCCcEEEEEcCCCCceeeeEeecCCccee
Q 002615 644 IWCG-SHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAS-TSGRLTAISVKALPFHTLWLHELEVPAFA 719 (900)
Q Consensus 644 i~~g-s~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t-~~g~l~~~~~~~~~g~~~w~~~~~~~~~~ 719 (900)
|+++ +.+| .||.+|..+++... ...+......+...+++..|++.+ .+|....|+.+...+..... .. .. .
T Consensus 262 La~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~-~~--~ 336 (429)
T PRK01742 262 LAFASSKDGVLNIYVMGANGGTPSQ-LTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GG-RG--Y 336 (429)
T ss_pred EEEEEecCCcEEEEEEECCCCCeEe-eccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cC-CC--C
Confidence 7665 4555 47888988776543 333334556777777667776655 34544444433211333221 11 11 2
Q ss_pred eeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeC--CCCceeeEEe
Q 002615 720 SLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQ--ESGNLLWEYS 796 (900)
Q Consensus 720 s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~--~tG~~~w~~~ 796 (900)
.+.+.++++.+++.+. ..++.+| .+|+....... .. ...+.. ...+..|++++.+|....|.. .+|+..-++.
T Consensus 337 ~~~~SpDG~~ia~~~~-~~i~~~Dl~~g~~~~lt~~-~~-~~~~~~-sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~ 412 (429)
T PRK01742 337 SAQISADGKTLVMING-DNVVKQDLTSGSTEVLSST-FL-DESPSI-SPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP 412 (429)
T ss_pred CccCCCCCCEEEEEcC-CCEEEEECCCCCeEEecCC-CC-CCCceE-CCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence 3456667777776655 4577789 77765321111 11 112211 112446777776775554432 3566554444
No 313
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.05 E-value=0.0024 Score=71.47 Aligned_cols=220 Identities=15% Similarity=0.106 Sum_probs=123.3
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|...++.. .+........++.+++++.+++..+++ ..||.+|..+|+........+ ....+.+.+++..
T Consensus 170 ~~l~~~d~~g~~~~-~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~-~~~~~~~spDg~~ 247 (417)
T TIGR02800 170 YELQVADYDGANPQ-TITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPG-MNGAPAFSPDGSK 247 (417)
T ss_pred ceEEEEcCCCCCCE-EeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCC-CccceEECCCCCE
Confidence 35888887644433 233333334577899999988877654 379999999997654333332 2334667777666
Q ss_pred EEE-ecCC--CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWC-GSHD--HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~-gs~d--g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++ .+.+ ..||.+|..+++..... ........+...+++..|++.+.. + .++.+|..+ ++.. ........
T Consensus 248 l~~~~~~~~~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~--~~~~-~l~~~~~~ 323 (417)
T TIGR02800 248 LAVSLSKDGNPDIYVMDLDGKQLTRLT-NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG--GEVR-RLTFRGGY 323 (417)
T ss_pred EEEEECCCCCccEEEEECCCCCEEECC-CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC--CCEE-EeecCCCC
Confidence 654 4433 35999999887654322 222333455666656777666543 2 588888775 4432 22222222
Q ss_pred eeeeeeeeCCCEEEEEeecC---cEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCC---eEEEEeCCCCc
Q 002615 718 FASLCITSANRHVICCLVDG---HVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNG---SIYSFEQESGN 790 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g---~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg---~l~~~d~~tG~ 790 (900)
...+.+.++++.++....++ .|+.+| .++.... ...... ...+.... .++.|++.+.++ .++.++ .+|+
T Consensus 324 ~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~-~~~p~~sp-dg~~l~~~~~~~~~~~l~~~~-~~g~ 399 (417)
T TIGR02800 324 NASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDTGL-DESPSFAP-NGRMILYATTRGGRGVLGLVS-TDGR 399 (417)
T ss_pred ccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCCCC-CCCceECC-CCCEEEEEEeCCCcEEEEEEE-CCCc
Confidence 34455666777777776654 688888 5554321 111111 11222111 244566665543 345544 4565
Q ss_pred eeeEEe
Q 002615 791 LLWEYS 796 (900)
Q Consensus 791 ~~w~~~ 796 (900)
....+.
T Consensus 400 ~~~~~~ 405 (417)
T TIGR02800 400 FRARLP 405 (417)
T ss_pred eeeECC
Confidence 554443
No 314
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=98.04 E-value=0.00024 Score=76.47 Aligned_cols=276 Identities=14% Similarity=0.132 Sum_probs=151.8
Q ss_pred ccccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEE
Q 002615 535 ELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFL 614 (900)
Q Consensus 535 ~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~ 614 (900)
++|+..-..||.- +.+..++..+.++. +.+++.||++.|..+-..+.+.....++..+.+|.....|+.|..+..|
T Consensus 5 ~~~r~~~~hci~d---~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W 80 (1081)
T KOG1538|consen 5 LTWRDKAEHCIND---IAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIW 80 (1081)
T ss_pred hhhhcccccchhe---eEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEe
Confidence 4577666667642 11222344455544 3469999999999988888777666678899999889999999999999
Q ss_pred ECCC-CcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC
Q 002615 615 DYLT-GDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG 693 (900)
Q Consensus 615 d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g 693 (900)
+.+- |.+ ++..++.+ .+..+.+-...+...+-+ .+-.|.++... +.+.+....+ .+.....++..+.+|-.+|
T Consensus 81 ~~klEG~L--kYSH~D~I-QCMsFNP~~h~LasCsLs-dFglWS~~qK~-V~K~kss~R~-~~CsWtnDGqylalG~~nG 154 (1081)
T KOG1538|consen 81 TSKLEGIL--KYSHNDAI-QCMSFNPITHQLASCSLS-DFGLWSPEQKS-VSKHKSSSRI-ICCSWTNDGQYLALGMFNG 154 (1081)
T ss_pred ccccccee--eeccCCee-eEeecCchHHHhhhcchh-hccccChhhhh-HHhhhhheeE-EEeeecCCCcEEEEeccCc
Confidence 8653 333 34444433 333444433334333322 12333333221 1111111111 1222334456788888899
Q ss_pred cEEEEEcCCCCceeeeEeecC----CcceeeeeeeeC-----CCEEEEEeecCcEEEECCCCCEEeeecCCCceeccccc
Q 002615 694 RLTAISVKALPFHTLWLHELE----VPAFASLCITSA-----NRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCT 764 (900)
Q Consensus 694 ~l~~~~~~~~~g~~~w~~~~~----~~~~~s~~~~~~-----~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~ 764 (900)
++..-|.. |+..-..+.+ .+++ +.++.+. ++.+-+..++.++..+.-+|+.+-+-..- -|-..|+
T Consensus 155 TIsiRNk~---gEek~~I~Rpgg~Nspiw-si~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L--~FdP~Ci 228 (1081)
T KOG1538|consen 155 TISIRNKN---GEEKVKIERPGGSNSPIW-SICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRAL--NFDPCCI 228 (1081)
T ss_pred eEEeecCC---CCcceEEeCCCCCCCCce-EEEecCCCCCCccceEEEEeccceeEEEEecceeecccccC--CCCchhh
Confidence 88766533 5544444332 1222 2222222 34556666666666555567665422111 1122233
Q ss_pred c-ccCCCeEEEEeeCCeEEEEeCCCCceeeEEe-cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 765 S-FALPSQVLICSRNGSIYSFEQESGNLLWEYS-VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 765 ~-~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
. ...+..+.+|+.|+.+..|- ..|-.+-+.. .++-+.+... .+.+..+.+|+.||+|-+|+.
T Consensus 229 sYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~------------~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 229 SYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQA------------KPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred eeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEE------------ccCCceEEEEEccCeeehhhh
Confidence 2 33466789999999888886 3454433221 1112222111 122778999999999999865
No 315
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=98.04 E-value=0.00026 Score=75.61 Aligned_cols=261 Identities=11% Similarity=0.073 Sum_probs=128.1
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCC-CEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPR-QLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~-~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
+..+.+.|..+..|+.||+|..|...||..+|++...+.+.+. ++.+.. .-|+..+.+..+..+|+.=|..+-.....
T Consensus 405 ~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~v-aw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ 483 (733)
T KOG0650|consen 405 SISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSV-AWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTK 483 (733)
T ss_pred EEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEE-EecCCCCceeEEEEecCceEEeCccccchhhhcchh
Confidence 3445556678999999999999999999999999998876654 444432 22333444445777776655332221111
Q ss_pred CccccCceeeccCCEEEEEeCCCcEEEEEcCC---CCceeeeEeecCCcceeeeeeeeCCCEEEEEee---cCcEEEEC-
Q 002615 671 GSIFGSPAIDEVHDVLYVASTSGRLTAISVKA---LPFHTLWLHELEVPAFASLCITSANRHVICCLV---DGHVVALD- 743 (900)
Q Consensus 671 ~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~---~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~---~g~v~~~d- 743 (900)
....+.|.... . ++.+..|.... ..+.+.-......+ .........++++.+... +..+++..
T Consensus 484 ell~~~~~~~~--p-------~~~~~~W~~~~~~e~~~~v~~~I~~~k~-i~~vtWHrkGDYlatV~~~~~~~~VliHQL 553 (733)
T KOG0650|consen 484 ELLASAPNESE--P-------DAAVVTWSRASLDELEKGVCIVIKHPKS-IRQVTWHRKGDYLATVMPDSGNKSVLIHQL 553 (733)
T ss_pred hhhhcCCCccC--C-------cccceeechhhhhhhccceEEEEecCCc-cceeeeecCCceEEEeccCCCcceEEEEec
Confidence 11122211110 0 11122221110 00000001111111 112222233444433222 12333333
Q ss_pred CCCCEE--eeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCC
Q 002615 744 SSGSII--WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSI 821 (900)
Q Consensus 744 ~~G~~~--w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (900)
+.+... ++... +.+.... ..-..-.++++|.. .|..||...+.++-+...+....++..+.. .
T Consensus 554 SK~~sQ~PF~ksk-G~vq~v~--FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp-----------~ 618 (733)
T KOG0650|consen 554 SKRKSQSPFRKSK-GLVQRVK--FHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHP-----------N 618 (733)
T ss_pred ccccccCchhhcC-CceeEEE--ecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecC-----------C
Confidence 221111 11111 1111111 11123367777754 599999888777666555666555544443 2
Q ss_pred CeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeCC--EEEEeeeCCeEEEE
Q 002615 822 DRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIGG--RVFVGCRDDYIYCI 890 (900)
Q Consensus 822 ~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~~--~l~vg~~dg~l~~l 890 (900)
|..+++|+.++++..+|.+-. .+.+....++.....+.+++.. ..-.|+.||.++++
T Consensus 619 GDnli~gs~d~k~~WfDldls------------skPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 619 GDNLILGSYDKKMCWFDLDLS------------SKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred CCeEEEecCCCeeEEEEcccC------------cchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 889999999999999998744 2333444455444444444433 22334444666655
No 316
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=98.03 E-value=0.0004 Score=67.62 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=132.0
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeecee--EecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAA--VLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
+.|-...+|.|+.+..||.+|-+..-.++.++.++..+. ++...-.|.+|+.+-.+..-|.++|..-.....+..-.-
T Consensus 113 DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vl 192 (397)
T KOG4283|consen 113 DTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVL 192 (397)
T ss_pred cCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceE
Confidence 455566678899999999999999888888887764322 111223577788888899999999998777665543333
Q ss_pred eeeEeCCC-CEEEEecCCCeEEEEECCCC-eEEEeeccCC--------------ccccCceeeccCCEEEEEeCCCcEEE
Q 002615 634 QPVVDAPR-QLIWCGSHDHNLYALDFRNY-RCVYKLPCGG--------------SIFGSPAIDEVHDVLYVASTSGRLTA 697 (900)
Q Consensus 634 ~~~~~~~~-~~i~~gs~dg~l~~~d~~~g-~~~w~~~~~~--------------~~~~~~~~~~~~~~l~v~t~~g~l~~ 697 (900)
+.-+.+.. -.+++|+.||.+..||+..- .+....+.+. ..+...+...++..++..+.+.++..
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEE
Confidence 33344433 35778999999999998643 2333322221 11122233333455666666777888
Q ss_pred EEcCCCCceeeeEe-------ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCC
Q 002615 698 ISVKALPFHTLWLH-------ELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALP 769 (900)
Q Consensus 698 ~~~~~~~g~~~w~~-------~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~ 769 (900)
|+..+ |+-.-+- +...+.+. .. +...+.+..--.++.++.++ -.|..+-..+....-.. .++....-
T Consensus 273 wn~~~--G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~-c~~~~~~f 347 (397)
T KOG4283|consen 273 WNMES--GRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRIN-CAAYRPDF 347 (397)
T ss_pred eeccc--CcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeecccceee-EEeecCch
Confidence 88766 4321110 00011111 11 22223333333468899999 78877644443322111 11112223
Q ss_pred CeEEEEeeCCeEEEEeC
Q 002615 770 SQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 770 ~~l~~g~~dg~l~~~d~ 786 (900)
...+.|..|+.++.|-+
T Consensus 348 q~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 348 EQCFTGDMNGNIYMWSP 364 (397)
T ss_pred hhhhccccCCccccccc
Confidence 46888888888888875
No 317
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=98.02 E-value=0.00044 Score=74.49 Aligned_cols=235 Identities=13% Similarity=0.057 Sum_probs=127.2
Q ss_pred CEEEEEeeCCEEEEEECCCCcEE------EEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEee--ccC-
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIY------WTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKL--PCG- 670 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~------w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~--~~~- 670 (900)
..++++..+|.+..+|...-... .....+..........+..-.|+..+.|.++.+||.++++++-.. -.+
T Consensus 65 HiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~ 144 (720)
T KOG0321|consen 65 HILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHT 144 (720)
T ss_pred ceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccc
Confidence 46888889999999986543322 111223333333334444566788899999999999998876542 111
Q ss_pred CccccCceeec-cCCEEEEEeCCCcEEEEEcCCCCceee--------eEeec-----------------CCcce-e--ee
Q 002615 671 GSIFGSPAIDE-VHDVLYVASTSGRLTAISVKALPFHTL--------WLHEL-----------------EVPAF-A--SL 721 (900)
Q Consensus 671 ~~~~~~~~~~~-~~~~l~v~t~~g~l~~~~~~~~~g~~~--------w~~~~-----------------~~~~~-~--s~ 721 (900)
+.+- +.|+.. +...+..|..||.+..||..-..-... -.++. ....+ + +.
T Consensus 145 ~Svk-S~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTv 223 (720)
T KOG0321|consen 145 GSVK-SECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTV 223 (720)
T ss_pred cccc-hhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEE
Confidence 2232 333333 234556678899999998653110000 00000 01111 1 23
Q ss_pred eeeeCCCEEEEEee-cCcEEEEC-CCCCEEeeec------CCCc---eecccccccc-CCCeEEEEeeCCeEEEEeCCCC
Q 002615 722 CITSANRHVICCLV-DGHVVALD-SSGSIIWRCR------TGGP---IFAGPCTSFA-LPSQVLICSRNGSIYSFEQESG 789 (900)
Q Consensus 722 ~~~~~~~~i~~~~~-~g~v~~~d-~~G~~~w~~~------~~~~---~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG 789 (900)
.+..++..+..++. |+.+-+|| ......++.. .... .....+...+ .+..+++.+.|+.||+||..+-
T Consensus 224 v~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~ 303 (720)
T KOG0321|consen 224 VLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSL 303 (720)
T ss_pred EEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEecccc
Confidence 44556677776665 89999999 4333222211 0000 0011111222 2467999999999999997653
Q ss_pred ceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 790 NLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 790 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
..-=.....+....+.++. .....++..+..|+.++..|+|..++-
T Consensus 304 s~sP~~~~sg~~~~sf~vk-------s~lSpd~~~l~SgSsd~~ayiw~vs~~ 349 (720)
T KOG0321|consen 304 SISPVAEFSGKLNSSFYVK-------SELSPDDCSLLSGSSDEQAYIWVVSSP 349 (720)
T ss_pred CcCchhhccCcccceeeee-------eecCCCCceEeccCCCcceeeeeecCc
Confidence 3211111111111111111 112345889999999999999988743
No 318
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=0.00022 Score=72.37 Aligned_cols=191 Identities=14% Similarity=0.101 Sum_probs=129.0
Q ss_pred CceEEEEecCCCeEEEEECC-----CCcEEEEEecCCceeeceeEecCCCEEEE-EeeC--CEEEEEECCCCcEEEEEec
Q 002615 556 SDIYLFVGSHSHKFICADAK-----RSSVLWEIKLEGRIECSAAVLADFSQVVV-GCYK--GKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~-----tG~~~w~~~~~~~~~~~~~~~~~~~~i~v-g~~d--g~l~~~d~~tG~~~w~~~~ 627 (900)
.++.|..+..+|.+..+..+ +-+.+|....++-. ..--.+....|++ |... ..+-.||++.++.+|+-+.
T Consensus 114 ~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~--~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKN 191 (412)
T KOG3881|consen 114 ADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLY--DVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKN 191 (412)
T ss_pred cCCEEEEEecCCcEEEEeccCCccccccceeeecCCcee--eeccCCCCCceEecCchhcccceeeeecccceeeeeccC
Confidence 57888888888999999877 44455543332211 1111222223444 6666 6789999999999998543
Q ss_pred CC--------cee-eeeeEeCC--CCEEEEecCCCeEEEEECCCC-eEEEeeccCCccccCceeeccCCEEEEEeCCCcE
Q 002615 628 CG--------EVK-CQPVVDAP--RQLIWCGSHDHNLYALDFRNY-RCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 628 ~~--------~~~-~~~~~~~~--~~~i~~gs~dg~l~~~d~~~g-~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
-. ++. +...|.+. ...+.+++.-+.+..||++.+ +++-++.......++....+.++.||+|+..|.+
T Consensus 192 vpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l 271 (412)
T KOG3881|consen 192 VPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQL 271 (412)
T ss_pred CCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchh
Confidence 21 111 12223333 456788888999999999876 5777788877777888888878999999999999
Q ss_pred EEEEcCCCCceeeeE-eecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEe
Q 002615 696 TAISVKALPFHTLWL-HELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIW 750 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~-~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w 750 (900)
..||.+. ++..-. ++.-.....+.++.+....+..++-|..+.++| .+-+++.
T Consensus 272 ~~FD~r~--~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 272 AKFDLRG--GKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred heecccC--ceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 9999987 665544 222233335556665566788888899999999 6645543
No 319
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=98.02 E-value=0.00079 Score=75.09 Aligned_cols=261 Identities=11% Similarity=0.049 Sum_probs=127.5
Q ss_pred eEEEEECCCC-cEEEEEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcE--EEEEec----CCceeeeeeEeC
Q 002615 568 KFICADAKRS-SVLWEIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDI--YWTFQT----CGEVKCQPVVDA 639 (900)
Q Consensus 568 ~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~--~w~~~~----~~~~~~~~~~~~ 639 (900)
.++.||.++- +..-.+.....+. +..+.+ +...++.|+++|.|.+||...+.. .+.... +.......+...
T Consensus 223 ~~~vW~~~~p~~Pe~~~~~~s~v~-~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLESPSEVT-CLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred eEEEEecCCCCCceEEEecCCcee-EEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 5777876653 3322333343332 334444 345788899999999999887765 443322 112222222222
Q ss_pred C--CCEEEEecCCCeEEEEECCCCeE-EEe------ecc----CC--ccccCceeeccCCEEEEEeCCCcEEEEEcCCCC
Q 002615 640 P--RQLIWCGSHDHNLYALDFRNYRC-VYK------LPC----GG--SIFGSPAIDEVHDVLYVASTSGRLTAISVKALP 704 (900)
Q Consensus 640 ~--~~~i~~gs~dg~l~~~d~~~g~~-~w~------~~~----~~--~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~ 704 (900)
. +..++.++.||.|..|+.+.-.. .-. .+. .. ...+--....+....++||..|.|+.-+-+..+
T Consensus 302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~ 381 (555)
T KOG1587|consen 302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYT 381 (555)
T ss_pred cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCc
Confidence 2 23488888899999997654221 000 000 00 001111112234779999999999875433211
Q ss_pred cee------eeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C-CCCEE-eeecCCCceeccccccccCCCeEEEE
Q 002615 705 FHT------LWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S-SGSII-WRCRTGGPIFAGPCTSFALPSQVLIC 775 (900)
Q Consensus 705 g~~------~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-~G~~~-w~~~~~~~~~~~~~~~~~~~~~l~~g 775 (900)
-.. +-.+..+.....+....+-...++..+.|.++..|. . .-.++ |.......++... .+......++++
T Consensus 382 ~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~va-WSptrpavF~~~ 460 (555)
T KOG1587|consen 382 PAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVA-WSPTRPAVFATV 460 (555)
T ss_pred ccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeE-EcCcCceEEEEE
Confidence 111 111111111112222222223334433466777776 3 33333 2222111121111 111122345666
Q ss_pred eeCCeEEEEeCCCCce--eeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 776 SRNGSIYSFEQESGNL--LWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 776 ~~dg~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
..+|.|+.||...... .-+.+....+..- ......+..+++|...|.+++|+...
T Consensus 461 d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~-----------~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 461 DGDGNLDIWDLLQDDEEPVLSQKVCSPALTR-----------VRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cCCCceehhhhhccccCCcccccccccccce-----------eecCCCCcEEEEecCCCcEEEEEcCc
Confidence 7799999999754321 2222222111111 11223378999999999999998863
No 320
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.01 E-value=0.017 Score=64.24 Aligned_cols=263 Identities=14% Similarity=0.128 Sum_probs=153.1
Q ss_pred ecCCCeEEEEECCC-CcEEEEEecCCceeeceeEecCCCEEEEEee-CCEEEEEECCCCcEEEEEecCCceeeeeeEeCC
Q 002615 563 GSHSHKFICADAKR-SSVLWEIKLEGRIECSAAVLADFSQVVVGCY-KGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAP 640 (900)
Q Consensus 563 gs~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~-dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 640 (900)
+..++.+..||..+ +........+........+.+++..+++++. ++.+..|+..+++....+..+........+.+.
T Consensus 130 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 209 (466)
T COG2319 130 SSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPD 209 (466)
T ss_pred CCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCC
Confidence 34488899999887 5655555555544446778888777777764 999999999888888777654444444444444
Q ss_pred CCEEEEe-cCCCeEEEEECCCCeEEE-eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCcee-eeEeecCCcc
Q 002615 641 RQLIWCG-SHDHNLYALDFRNYRCVY-KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHT-LWLHELEVPA 717 (900)
Q Consensus 641 ~~~i~~g-s~dg~l~~~d~~~g~~~w-~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~-~w~~~~~~~~ 717 (900)
+..+..+ +.|+.+..||..++.... .+....... ...+...+..+..++.++.+..|+... ... +.....+...
T Consensus 210 ~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~ 286 (466)
T COG2319 210 GGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRS--SSSLLRTLSGHSSS 286 (466)
T ss_pred cceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecC--CCcEEEEEecCCcc
Confidence 4434444 889999999988777776 344333221 114444345677788899999999875 332 3333222222
Q ss_pred eeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec--CCCc-eeccccccccCCCeEEEE-eeCCeEEEEeCCCCcee
Q 002615 718 FASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCR--TGGP-IFAGPCTSFALPSQVLIC-SRNGSIYSFEQESGNLL 792 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~--~~~~-~~~~~~~~~~~~~~l~~g-~~dg~l~~~d~~tG~~~ 792 (900)
+....+.+....+..++.++.+..++ .++....... .... +..... ......+..+ ..++.+..|+.......
T Consensus 287 v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 364 (466)
T COG2319 287 VLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF--SPDGSLLVSGGSDDGTIRLWDLRTGKPL 364 (466)
T ss_pred EEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE--CCCCCEEEEeecCCCcEEeeecCCCcee
Confidence 33334444566777777777778888 5555544333 1111 211111 1111345555 56777888887766533
Q ss_pred eEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 793 WEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 793 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
.............+ .. .......+..++.+.+|+....
T Consensus 365 ~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~ 402 (466)
T COG2319 365 KTLEGHSNVLSVSF-----------SP-DGRVVSSGSTDGTVRLWDLSTG 402 (466)
T ss_pred EEecCCceEEEEEE-----------CC-CCCEEEEecCCCceEEEecccC
Confidence 32222222111100 01 1122224678889999988754
No 321
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.01 E-value=0.0048 Score=69.10 Aligned_cols=219 Identities=13% Similarity=0.076 Sum_probs=122.0
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
.|+..|.+.+... .+........++.+++|+..|+..+.+ ..||.+|..+|+........ .....+.+++++..|
T Consensus 199 ~l~i~d~dG~~~~-~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~-g~~~~~~wSPDG~~L 276 (448)
T PRK04792 199 QLMIADYDGYNEQ-MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP-GINGAPRFSPDGKKL 276 (448)
T ss_pred EEEEEeCCCCCce-EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC-CCcCCeeECCCCCEE
Confidence 5666776544332 222222334578899999888776543 26999999988764332222 233456777777766
Q ss_pred EE-ecCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-C--CcEEEEEcCCCCceeeeEeecCCcce
Q 002615 645 WC-GSHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-S--GRLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 645 ~~-gs~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~--g~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
++ .+.+| .||.+|..+++... ...+......|...+++..|++.+. + ..++.+|.++ |+... ........
T Consensus 277 a~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~--g~~~~-Lt~~g~~~ 352 (448)
T PRK04792 277 ALVLSKDGQPEIYVVDIATKALTR-ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS--GKVSR-LTFEGEQN 352 (448)
T ss_pred EEEEeCCCCeEEEEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC--CCEEE-EecCCCCC
Confidence 54 45555 49999998887543 2223334556777776677766654 2 3588888776 54321 11122222
Q ss_pred eeeeeeeCCCEEEEEeecC---cEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeC-C--eEEEEeCCCCce
Q 002615 719 ASLCITSANRHVICCLVDG---HVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRN-G--SIYSFEQESGNL 791 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~g---~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~d-g--~l~~~d~~tG~~ 791 (900)
..+.+.++++.++..+..+ .|+.+| .+|+.. ...... .-..|.... .+..|++.+.+ | .++.++. +|..
T Consensus 353 ~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~sp-dG~~I~~~~~~~g~~~l~~~~~-~G~~ 428 (448)
T PRK04792 353 LGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSVAP-NGTMVIYSTTYQGKQVLAAVSI-DGRF 428 (448)
T ss_pred cCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceECC-CCCEEEEEEecCCceEEEEEEC-CCCc
Confidence 3456667777777765432 467788 666542 122111 111222222 23455555433 3 3788885 5665
Q ss_pred eeEEe
Q 002615 792 LWEYS 796 (900)
Q Consensus 792 ~w~~~ 796 (900)
...+.
T Consensus 429 ~~~l~ 433 (448)
T PRK04792 429 KARLP 433 (448)
T ss_pred eEECc
Confidence 55443
No 322
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.00 E-value=0.0012 Score=75.78 Aligned_cols=241 Identities=12% Similarity=0.113 Sum_probs=144.6
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCc--------------EEEE----EecCCceeeeeeEeCCCCEEEEecCCCe
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGD--------------IYWT----FQTCGEVKCQPVVDAPRQLIWCGSHDHN 652 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~--------------~~w~----~~~~~~~~~~~~~~~~~~~i~~gs~dg~ 652 (900)
.+.-+++||.++++|+.|..+..|....+- ..|+ +..+..-..-..+++++..+..++.|+.
T Consensus 73 ~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~Dns 152 (942)
T KOG0973|consen 73 NCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNS 152 (942)
T ss_pred eEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccce
Confidence 345588999999999999998888865211 1232 1222222333445666777888999999
Q ss_pred EEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEee------cCCcceeeeeeeeC
Q 002615 653 LYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHE------LEVPAFASLCITSA 726 (900)
Q Consensus 653 l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~------~~~~~~~s~~~~~~ 726 (900)
+..||.++.+.+-++..+....-...+++.+..+..-+.|+.+..|+..+ -....... .....|.-+..+++
T Consensus 153 Viiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d--w~i~k~It~pf~~~~~~T~f~RlSWSPD 230 (942)
T KOG0973|consen 153 VIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD--WGIEKSITKPFEESPLTTFFLRLSWSPD 230 (942)
T ss_pred EEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc--ceeeEeeccchhhCCCcceeeecccCCC
Confidence 99999999988888777766666677788778888888999999999554 22222221 11223344455666
Q ss_pred CCEEEEEe-ecCcEE---EECCCCCEEeeecC-----CCce---eccccccccCCC------------eEEEEeeCCeEE
Q 002615 727 NRHVICCL-VDGHVV---ALDSSGSIIWRCRT-----GGPI---FAGPCTSFALPS------------QVLICSRNGSIY 782 (900)
Q Consensus 727 ~~~i~~~~-~~g~v~---~~d~~G~~~w~~~~-----~~~~---~~~~~~~~~~~~------------~l~~g~~dg~l~ 782 (900)
+.++.+.. .++... .++. | -|+... .+++ ...|.+.....+ -+.+|+.|+.|.
T Consensus 231 G~~las~nA~n~~~~~~~IieR-~--tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlS 307 (942)
T KOG0973|consen 231 GHHLASPNAVNGGKSTIAIIER-G--TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLS 307 (942)
T ss_pred cCeecchhhccCCcceeEEEec-C--CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEE
Confidence 66665542 233322 2322 1 244321 1111 111111111111 355678899999
Q ss_pred EEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccc
Q 002615 783 SFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGK 846 (900)
Q Consensus 783 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~ 846 (900)
+|+...-+++... ..+....+.+ .+..++|-.+++++.||.|..+..+....|.
T Consensus 308 VW~T~~~RPl~vi---~~lf~~SI~D-------msWspdG~~LfacS~DGtV~~i~Fee~ElG~ 361 (942)
T KOG0973|consen 308 VWNTALPRPLFVI---HNLFNKSIVD-------MSWSPDGFSLFACSLDGTVALIHFEEKELGV 361 (942)
T ss_pred EEecCCCCchhhh---hhhhcCceee-------eeEcCCCCeEEEEecCCeEEEEEcchHHhCc
Confidence 9986555554321 1122222222 2244558899999999999999988765543
No 323
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.98 E-value=0.0016 Score=72.69 Aligned_cols=180 Identities=17% Similarity=0.157 Sum_probs=108.0
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEE-EeeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVV-GCYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~v-g~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|..+|+..-.....+ ....+.+++++..|++ .+.+| .||.+|..++... +...+......+.+.+++..
T Consensus 220 ~~I~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~wSpDG~~ 297 (427)
T PRK02889 220 PVVYVHDLATGRRRVVANFKG-SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLR-RLTQSSGIDTEPFFSPDGRS 297 (427)
T ss_pred cEEEEEECCCCCEEEeecCCC-CccceEECCCCCEEEEEEccCCCceEEEEECCCCCcE-ECCCCCCCCcCeEEcCCCCE
Confidence 469999999998653332332 2347889999888765 45555 5888897766543 33223334456778877777
Q ss_pred EEEecCC---CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC---cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWCGSHD---HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG---RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~gs~d---g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g---~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++.+.. -.||.++..+++..... ..+.....+.+++++..|++.+..+ .|+.+|..+ ++...... . ..
T Consensus 298 l~f~s~~~g~~~Iy~~~~~~g~~~~lt-~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~~lt~-~-~~ 372 (427)
T PRK02889 298 IYFTSDRGGAPQIYRMPASGGAAQRVT-FTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVTALTD-T-TR 372 (427)
T ss_pred EEEEecCCCCcEEEEEECCCCceEEEe-cCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeEEccC-C-CC
Confidence 7665532 25888887776543222 2333344577777677777666544 588899876 55433221 1 11
Q ss_pred eeeeeeeeCCCEEEEEeecC---cEEEECCCCCEEeeec
Q 002615 718 FASLCITSANRHVICCLVDG---HVVALDSSGSIIWRCR 753 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g---~v~~~d~~G~~~w~~~ 753 (900)
...+.+.+++..++..+.++ .+++++.+|.......
T Consensus 373 ~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~ 411 (427)
T PRK02889 373 DESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLS 411 (427)
T ss_pred ccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEee
Confidence 24556667777777665443 2555555565554443
No 324
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.97 E-value=0.0015 Score=73.04 Aligned_cols=179 Identities=12% Similarity=0.142 Sum_probs=108.2
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE-eeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG-CYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg-~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|..+|+........+ ....+.+++++..|++. +.+| .||.+|..+|+..- ..........+.+.+++..
T Consensus 228 ~~l~~~dl~~g~~~~l~~~~g-~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~~~~~~~~spDG~~ 305 (433)
T PRK04922 228 SAIYVQDLATGQRELVASFRG-INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR-LTNHFGIDTEPTWAPDGKS 305 (433)
T ss_pred cEEEEEECCCCCEEEeccCCC-CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE-CccCCCCccceEECCCCCE
Confidence 469999999888654333332 33467889998877654 4444 69999999887643 2223334456777777777
Q ss_pred EEEecC-CC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC---cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWCGSH-DH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG---RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~gs~-dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g---~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++.+. +| .+|.+|..+++..... ..+.....+.++++++.|++.+.++ .++.+|+.+ |+.. ..... ..
T Consensus 306 l~f~sd~~g~~~iy~~dl~~g~~~~lt-~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~--g~~~-~Lt~~-~~ 380 (433)
T PRK04922 306 IYFTSDRGGRPQIYRVAASGGSAERLT-FQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST--GSVR-TLTPG-SL 380 (433)
T ss_pred EEEEECCCCCceEEEEECCCCCeEEee-cCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC--CCeE-ECCCC-CC
Confidence 776653 33 4999998887654322 2333444677777777887765433 588899876 5433 22211 12
Q ss_pred eeeeeeeeCCCEEEEEeec---CcEEEECCCCCEEeee
Q 002615 718 FASLCITSANRHVICCLVD---GHVVALDSSGSIIWRC 752 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~---g~v~~~d~~G~~~w~~ 752 (900)
...+.+.+++..++..+.+ +.|+.++.+|......
T Consensus 381 ~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l 418 (433)
T PRK04922 381 DESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRL 418 (433)
T ss_pred CCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEc
Confidence 2345566666666655442 2466666445444433
No 325
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=97.95 E-value=0.0022 Score=63.83 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=73.2
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECCCCeEEEeeccC---Ccccc
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFRNYRCVYKLPCG---GSIFG 675 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~---~~~~~ 675 (900)
-++++|.+-|.|+.+|..+++....+..++......-+.+ ..++|+++|.|..|..||++++.++-.+..- ..-.-
T Consensus 106 p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVL 185 (385)
T KOG1034|consen 106 PFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVL 185 (385)
T ss_pred eeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEE
Confidence 4677888999999999999988777665543322222222 3468899999999999999999998776431 11222
Q ss_pred CceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 676 SPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 676 ~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
+.-++..++++..+..|..|..|+++.
T Consensus 186 SvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 186 SVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred EEEEcCCCCeeeccCCcceEEEEecCh
Confidence 333444567788888889999998774
No 326
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.95 E-value=4.1e-05 Score=79.03 Aligned_cols=193 Identities=15% Similarity=0.090 Sum_probs=136.6
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
.+..+.+|...|.|.++|-.|+++..++.+...+.. +.+.-+.. .++......+|+|| ..|..+........+.-.
T Consensus 140 nGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~D-v~~LHneq-~~AVAQK~y~yvYD-~~GtElHClk~~~~v~rL- 215 (545)
T KOG1272|consen 140 NGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRD-VTFLHNEQ-FFAVAQKKYVYVYD-NNGTELHCLKRHIRVARL- 215 (545)
T ss_pred CccEEEecCCccceeeeecccceeeeeeehhhhhhh-hhhhcchH-HHHhhhhceEEEec-CCCcEEeehhhcCchhhh-
Confidence 566788899999999999999999988877665542 33333333 44445567789999 778777665554443322
Q ss_pred eEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 636 VVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
-+-+..-.+..++..|.+...|..+|+.+-.+..+..-.......+-+..+-+|..+|.+..|+++. -+++-+.-++.
T Consensus 216 eFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s--kePLvKiLcH~ 293 (545)
T KOG1272|consen 216 EFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS--KEPLVKILCHR 293 (545)
T ss_pred cccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC--cchHHHHHhcC
Confidence 1222233455667778899999999999877776554444444555456788899999999999887 67777666776
Q ss_pred cceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecC
Q 002615 716 PAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRT 754 (900)
Q Consensus 716 ~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~ 754 (900)
...++.++...+.++...+.|..+-+|| .+-..+.++..
T Consensus 294 g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 294 GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred CCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 6668888888888888888899999999 65444444433
No 327
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=97.93 E-value=0.0002 Score=74.47 Aligned_cols=184 Identities=11% Similarity=0.073 Sum_probs=119.1
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC-Cceeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC-GEVKCQP 635 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~-~~~~~~~ 635 (900)
..++..|..++.|..||.+...+....+-+......+.+...+.+|..++..|.|......|+...-.|..+ +...-..
T Consensus 91 S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll 170 (673)
T KOG4378|consen 91 SLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLL 170 (673)
T ss_pred ceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEe
Confidence 356777888999999999844333333333333334444445568888999999999999998776666555 2222122
Q ss_pred eEeCC-CCEEEEecCCCeEEEEECCCCeEEEeec-cCCccccCceeeccCCEEEE-EeCCCcEEEEEcCCCCceeeeEee
Q 002615 636 VVDAP-RQLIWCGSHDHNLYALDFRNYRCVYKLP-CGGSIFGSPAIDEVHDVLYV-ASTSGRLTAISVKALPFHTLWLHE 712 (900)
Q Consensus 636 ~~~~~-~~~i~~gs~dg~l~~~d~~~g~~~w~~~-~~~~~~~~~~~~~~~~~l~v-~t~~g~l~~~~~~~~~g~~~w~~~ 712 (900)
-+... +-.+.+++++|.+..||.....++..+. .+.......|+.+.+..|++ -..|..|+.||... -+..-+..
T Consensus 171 ~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s--~~s~~~l~ 248 (673)
T KOG4378|consen 171 RYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS--QASTDRLT 248 (673)
T ss_pred ecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc--ccccceee
Confidence 22332 3456678899999999988777665442 23444445555554444443 45788999999764 22222333
Q ss_pred cCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 713 LEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 713 ~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
...| +++.++...+-++.+|+..|.|+.||
T Consensus 249 y~~P-lstvaf~~~G~~L~aG~s~G~~i~YD 278 (673)
T KOG4378|consen 249 YSHP-LSTVAFSECGTYLCAGNSKGELIAYD 278 (673)
T ss_pred ecCC-cceeeecCCceEEEeecCCceEEEEe
Confidence 3333 36677777777888889999999999
No 328
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.93 E-value=0.0012 Score=64.94 Aligned_cols=263 Identities=13% Similarity=0.051 Sum_probs=144.7
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEEC-------C----C---CcE------
Q 002615 562 VGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDY-------L----T---GDI------ 621 (900)
Q Consensus 562 igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~-------~----t---G~~------ 621 (900)
.+|.|+.-..|...+|+++-++..+..-..++.+.+.+..+..++.|+.-..|.. . + ++.
T Consensus 165 tASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sD 244 (481)
T KOG0300|consen 165 TASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSD 244 (481)
T ss_pred ecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccc
Confidence 3456677777777888888777766555556677777666777777765544430 0 0 000
Q ss_pred --------------------EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec
Q 002615 622 --------------------YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE 681 (900)
Q Consensus 622 --------------------~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~ 681 (900)
+-.+..+..+....-+-..+..++++++|.+...||.++|+++.....+..-....+..+
T Consensus 245 e~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHp 324 (481)
T KOG0300|consen 245 EHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHP 324 (481)
T ss_pred ccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCC
Confidence 000111111111111222456788899999999999999999987766554444444444
Q ss_pred cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CC-CCEEeeecCCCcee
Q 002615 682 VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SS-GSIIWRCRTGGPIF 759 (900)
Q Consensus 682 ~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~-G~~~w~~~~~~~~~ 759 (900)
....++..+.+-....||.... -.-+--+..+.....+. ....+++++.|+.|..+-+|| .+ -..+-++.+..++-
T Consensus 325 tQrLVvTsSrDtTFRLWDFRea-I~sV~VFQGHtdtVTS~-vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~N 402 (481)
T KOG0300|consen 325 TQRLVVTSSRDTTFRLWDFREA-IQSVAVFQGHTDTVTSV-VFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPAN 402 (481)
T ss_pred cceEEEEeccCceeEeccchhh-cceeeeecccccceeEE-EEecCCceeecCCCceEEEeeeccccCcceeeecCCccc
Confidence 3344555666777888886641 11111222233332333 334567899999999999998 43 34555555544322
Q ss_pred ccccccccCCC-eEEEEeeCCeEEEEeCCCCceeeEEe-----cCCceec-ccccccccccccccccCCCeEEEEEcCCC
Q 002615 760 AGPCTSFALPS-QVLICSRNGSIYSFEQESGNLLWEYS-----VGDPITA-SAYIDEHLQLKLESCLSIDRLVCICTSSG 832 (900)
Q Consensus 760 ~~~~~~~~~~~-~l~~g~~dg~l~~~d~~tG~~~w~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~g~~~G 832 (900)
-. ....++ .|.+.-.+..+..||.. |.-+-.++ .+...+. .++..+. + -..++.++-|.
T Consensus 403 Rv---avs~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrtsRqgHrRMV~c~AW~eeh-------p---~cnLftcGFDR 468 (481)
T KOG0300|consen 403 RV---AVSKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRTSRQGHRRMVTCCAWLEEH-------P---ACNLFTCGFDR 468 (481)
T ss_pred ee---EeecCCceEEeccCCceEEEEecC-CCccccCCcccccccceeeeeeeccccC-------c---ccccccccccc
Confidence 11 122233 34444556678888864 54433222 1112222 2222221 1 13466666777
Q ss_pred cEEEEEee
Q 002615 833 SIHILRVN 840 (900)
Q Consensus 833 ~v~~~d~~ 840 (900)
.+.-|+.+
T Consensus 469 ~v~gW~in 476 (481)
T KOG0300|consen 469 MVAGWKIN 476 (481)
T ss_pred eeeeeEec
Confidence 77777665
No 329
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.92 E-value=0.007 Score=67.89 Aligned_cols=211 Identities=13% Similarity=0.104 Sum_probs=119.2
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i 644 (900)
.|+..|.+.++.. ..........++.++++++.|+..+++ ..||.+|..+|+........+ ....+.+.+++..|
T Consensus 180 ~l~~~d~~g~~~~-~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g-~~~~~~~SpDG~~l 257 (430)
T PRK00178 180 TLQRSDYDGARAV-TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEG-LNGAPAWSPDGSKL 257 (430)
T ss_pred EEEEECCCCCCce-EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCC-CcCCeEECCCCCEE
Confidence 4777787655432 232233334578899999888665543 369999999997654322222 23456777777666
Q ss_pred EE-ecCCC--eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC---CcEEEEEcCCCCceeeeEeecCCcce
Q 002615 645 WC-GSHDH--NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS---GRLTAISVKALPFHTLWLHELEVPAF 718 (900)
Q Consensus 645 ~~-gs~dg--~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~---g~l~~~~~~~~~g~~~w~~~~~~~~~ 718 (900)
++ .+.+| .||.+|.++++... ..........|...+++..|++.+.. ..++.+++.+ |+.. +........
T Consensus 258 a~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~--g~~~-~lt~~~~~~ 333 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG--GRAE-RVTFVGNYN 333 (430)
T ss_pred EEEEccCCCceEEEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC--CCEE-EeecCCCCc
Confidence 54 44444 69999999887543 22233345566777667777776642 3588888776 5432 111222222
Q ss_pred eeeeeeeCCCEEEEEeecC---cEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeC---CeEEEEeCC
Q 002615 719 ASLCITSANRHVICCLVDG---HVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRN---GSIYSFEQE 787 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~g---~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~l~~~d~~ 787 (900)
..+.+.++++.++.....+ .|+.+| .+|+... ...... -..+.+.. .+..+++.+.+ ..|+.++..
T Consensus 334 ~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~~-~~~p~~sp-dg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 334 ARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTSL-DESPSVAP-NGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred cceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCCCC-CCCceECC-CCCEEEEEEecCCceEEEEEECC
Confidence 3445666777777665432 477888 6665432 221111 11222222 23455555443 347777764
No 330
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=97.91 E-value=0.0034 Score=61.14 Aligned_cols=226 Identities=16% Similarity=0.192 Sum_probs=127.1
Q ss_pred eEecCCCEEEEE-eeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEE-Eeecc--
Q 002615 594 AVLADFSQVVVG-CYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCV-YKLPC-- 669 (900)
Q Consensus 594 ~~~~~~~~i~vg-~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~-w~~~~-- 669 (900)
...+|| .||.+ ...|.+=.+|+.||+.. ++..+....-.-++...++..|+......|..+|.++++.. |....
T Consensus 68 apapdG-~VWft~qg~gaiGhLdP~tGev~-~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt~evt~f~lp~~~ 145 (353)
T COG4257 68 APAPDG-AVWFTAQGTGAIGHLDPATGEVE-TYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKTLEVTRFPLPLEH 145 (353)
T ss_pred ccCCCC-ceEEecCccccceecCCCCCceE-EEecCCCCCCceEEECCCCCeeEecCcceeEEecCcccceEEeeccccc
Confidence 444554 45554 44567889999999886 45554433322334444567888765558999999887653 44332
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCce-eeeEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC-CCC
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFH-TLWLHELEVPAFASLCITSANRHVICCLV-DGHVVALD-SSG 746 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~-~~w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~~G 746 (900)
.......+++++ .++||+....|.--.+|+.. +. .+|....+... ..++. .-++.+|..+. +..|..+| .+|
T Consensus 146 a~~nlet~vfD~-~G~lWFt~q~G~yGrLdPa~--~~i~vfpaPqG~gp-yGi~a-tpdGsvwyaslagnaiaridp~~~ 220 (353)
T COG4257 146 ADANLETAVFDP-WGNLWFTGQIGAYGRLDPAR--NVISVFPAPQGGGP-YGICA-TPDGSVWYASLAGNAIARIDPFAG 220 (353)
T ss_pred CCCcccceeeCC-CccEEEeeccccceecCccc--CceeeeccCCCCCC-cceEE-CCCCcEEEEeccccceEEcccccC
Confidence 223345566776 68888888777666777665 22 22322211111 22233 34566777654 55677888 666
Q ss_pred CEEeeecCCCc-eeccccccccCCCeEEEEee-CCeEEEEeCCCCceee-EEecCCc--eecccccccccccccccccCC
Q 002615 747 SIIWRCRTGGP-IFAGPCTSFALPSQVLICSR-NGSIYSFEQESGNLLW-EYSVGDP--ITASAYIDEHLQLKLESCLSI 821 (900)
Q Consensus 747 ~~~w~~~~~~~-~~~~~~~~~~~~~~l~~g~~-dg~l~~~d~~tG~~~w-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 821 (900)
... .+..... ...+-.+..+.-+.+|+.+. .|.++.||+.+-. | ++++++. --.+..+++
T Consensus 221 ~ae-v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s--W~eypLPgs~arpys~rVD~------------ 285 (353)
T COG4257 221 HAE-VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS--WIEYPLPGSKARPYSMRVDR------------ 285 (353)
T ss_pred Ccc-eecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc--ceeeeCCCCCCCcceeeecc------------
Confidence 221 1111111 11111223344678998864 5789999998654 6 4454432 222233333
Q ss_pred CeEEEE-EcCCCcEEEEEeec
Q 002615 822 DRLVCI-CTSSGSIHILRVNL 841 (900)
Q Consensus 822 ~~~l~~-g~~~G~v~~~d~~~ 841 (900)
.+.+|. -...|.|..||..+
T Consensus 286 ~grVW~sea~agai~rfdpet 306 (353)
T COG4257 286 HGRVWLSEADAGAIGRFDPET 306 (353)
T ss_pred CCcEEeeccccCceeecCccc
Confidence 566776 34456677777763
No 331
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.90 E-value=0.003 Score=70.44 Aligned_cols=180 Identities=12% Similarity=0.089 Sum_probs=109.6
Q ss_pred CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE-eeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCC
Q 002615 566 SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG-CYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQ 642 (900)
Q Consensus 566 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg-~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 642 (900)
+..|+.+|..+|+........+. ...+.+++|+..|++. +.+| .||.+|.++|+..-.. .+......+.+.+++.
T Consensus 222 ~~~i~i~dl~~G~~~~l~~~~~~-~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt-~~~~~~~~~~wSPDG~ 299 (429)
T PRK03629 222 RSALVIQTLANGAVRQVASFPRH-NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQ 299 (429)
T ss_pred CcEEEEEECCCCCeEEccCCCCC-cCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEcc-CCCCCcCceEECCCCC
Confidence 34699999998876543333332 3467899999887765 3344 5999999988765332 2233445677888777
Q ss_pred EEEEecCCC---eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC---CcEEEEEcCCCCceeeeEeecCCc
Q 002615 643 LIWCGSHDH---NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS---GRLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 643 ~i~~gs~dg---~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~---g~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
.|++.+.++ .||.+|..+|+.... ...+.....+.+.+++..|++.+.+ ..++.+|+++ |+.. ..... .
T Consensus 300 ~I~f~s~~~g~~~Iy~~d~~~g~~~~l-t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~--g~~~-~Lt~~-~ 374 (429)
T PRK03629 300 NLAYTSDQAGRPQVYKVNINGGAPQRI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQ-VLTDT-F 374 (429)
T ss_pred EEEEEeCCCCCceEEEEECCCCCeEEe-ecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCC--CCeE-EeCCC-C
Confidence 776665432 689999888765432 2233334456677766777665433 3578888876 5432 11111 1
Q ss_pred ceeeeeeeeCCCEEEEEeecCc---EEEECCCCCEEeee
Q 002615 717 AFASLCITSANRHVICCLVDGH---VVALDSSGSIIWRC 752 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~---v~~~d~~G~~~w~~ 752 (900)
...++.+.+++..++..+.++. ++.++.+|....++
T Consensus 375 ~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l 413 (429)
T PRK03629 375 LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 413 (429)
T ss_pred CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEEC
Confidence 1235566777777777776654 44555556554444
No 332
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.90 E-value=0.0031 Score=70.66 Aligned_cols=180 Identities=12% Similarity=0.083 Sum_probs=106.1
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEE-EeeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVV-GCYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~v-g~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|..+|+........+ ....+.+++++..+++ .+.+| .||.+|..+|+..- ...+......+.+.+++..
T Consensus 242 ~~L~~~dl~tg~~~~lt~~~g-~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~ 319 (448)
T PRK04792 242 AEIFVQDIYTQVREKVTSFPG-INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR-ITRHRAIDTEPSWHPDGKS 319 (448)
T ss_pred cEEEEEECCCCCeEEecCCCC-CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE-CccCCCCccceEECCCCCE
Confidence 369999999988643322222 2346788999887765 44455 49999998887642 2223334456777777777
Q ss_pred EEEecC-C--CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWCGSH-D--HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~gs~-d--g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++.+. + ..+|.+|.++|+..... ..+.....+.+.++++.+++.+.. + .++.+|+++ ++..- .... ..
T Consensus 320 I~f~s~~~g~~~Iy~~dl~~g~~~~Lt-~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~--g~~~~-lt~~-~~ 394 (448)
T PRK04792 320 LIFTSERGGKPQIYRVNLASGKVSRLT-FEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET--GAMQV-LTST-RL 394 (448)
T ss_pred EEEEECCCCCceEEEEECCCCCEEEEe-cCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCC--CCeEE-ccCC-CC
Confidence 766543 2 36999999888754322 233333456677767777776543 2 567788776 54321 1111 11
Q ss_pred eeeeeeeeCCCEEEEEeecC---cEEEECCCCCEEeeec
Q 002615 718 FASLCITSANRHVICCLVDG---HVVALDSSGSIIWRCR 753 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g---~v~~~d~~G~~~w~~~ 753 (900)
...+.+.+++..++..+..+ .++.++.+|.......
T Consensus 395 d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~ 433 (448)
T PRK04792 395 DESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLP 433 (448)
T ss_pred CCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECc
Confidence 12445666677666554432 2566665565544443
No 333
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.89 E-value=4.7e-05 Score=78.57 Aligned_cols=186 Identities=12% Similarity=0.113 Sum_probs=124.0
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc
Q 002615 638 DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 638 ~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
..++..++.|..-|+|.++|-.++++...+.....+...-.+.. ...+.......+|.||-+ |..+.........
T Consensus 138 trnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHn--eq~~AVAQK~y~yvYD~~---GtElHClk~~~~v 212 (545)
T KOG1272|consen 138 TRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHN--EQFFAVAQKKYVYVYDNN---GTELHCLKRHIRV 212 (545)
T ss_pred cCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcc--hHHHHhhhhceEEEecCC---CcEEeehhhcCch
Confidence 34567788888899999999999999888776555544433433 334444445668888855 6666655443332
Q ss_pred eeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEe
Q 002615 718 FASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~ 796 (900)
....+.+.-=.+..++..|.+...| ++|+++-.+.++..-....+. .-.+..+-+|..+|.|..|.+.+.+.+-++-
T Consensus 213 -~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~q-NP~NaVih~GhsnGtVSlWSP~skePLvKiL 290 (545)
T KOG1272|consen 213 -ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQ-NPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL 290 (545)
T ss_pred -hhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhc-CCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence 1222333322455566778888889 999988766654322111100 1134567788889999999999888877666
Q ss_pred cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 797 VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
.+...+++..++.. +.+++..+.|..+.+||.+.
T Consensus 291 cH~g~V~siAv~~~-----------G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 291 CHRGPVSSIAVDRG-----------GRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred hcCCCcceEEECCC-----------CcEEeecccccceeEeeecc
Confidence 66666666666553 88888888999999999984
No 334
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.88 E-value=0.0013 Score=76.33 Aligned_cols=234 Identities=16% Similarity=0.198 Sum_probs=136.5
Q ss_pred CceEEEEecCCCeEEEEECCC--C---cEEE--EEe-cCCceeeceeEecCCCEEEEEeeCCEEEEEECCC--CcEEEE-
Q 002615 556 SDIYLFVGSHSHKFICADAKR--S---SVLW--EIK-LEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLT--GDIYWT- 624 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~t--G---~~~w--~~~-~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~t--G~~~w~- 624 (900)
.......||.||.|.+||... | ..+- .+. .+.+++ .......++.+.+++.||.+..++..- ++..--
T Consensus 1060 ~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~-~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~ 1138 (1431)
T KOG1240|consen 1060 HTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVE-KVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVAT 1138 (1431)
T ss_pred CCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceE-EEEeccCCCeEEEEcCCCeEEEEEccccccccceee
Confidence 346777889999999999753 1 1111 122 233443 334445667888899999888777544 221110
Q ss_pred ------EecCCceeeeeeEe--CCCCEEEEecCCCeEEEEECCCCeEEEeecc--CCccccCceeeccCCEEEEEeCCCc
Q 002615 625 ------FQTCGEVKCQPVVD--APRQLIWCGSHDHNLYALDFRNYRCVYKLPC--GGSIFGSPAIDEVHDVLYVASTSGR 694 (900)
Q Consensus 625 ------~~~~~~~~~~~~~~--~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~--~~~~~~~~~~~~~~~~l~v~t~~g~ 694 (900)
....+.+...-.+. ...-.++.++..+.+..||.......|+.+. ..+..++.++++....+.+||..|.
T Consensus 1139 ~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~ 1218 (1431)
T KOG1240|consen 1139 QVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQ 1218 (1431)
T ss_pred eeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCce
Confidence 01112222221221 1122566777888999999999999998765 3456677788887778999999999
Q ss_pred EEEEEcCCCCceeeeEeecCCccee-eeeeeeC-CCEEEE-Ee-ecCcEEEEC-CCCCE---EeeecCCCcee--cc---
Q 002615 695 LTAISVKALPFHTLWLHELEVPAFA-SLCITSA-NRHVIC-CL-VDGHVVALD-SSGSI---IWRCRTGGPIF--AG--- 761 (900)
Q Consensus 695 l~~~~~~~~~g~~~w~~~~~~~~~~-s~~~~~~-~~~i~~-~~-~~g~v~~~d-~~G~~---~w~~~~~~~~~--~~--- 761 (900)
+.+||++-..--.-|++....+... ..++... +...++ +. ..+.+..|+ .+|.. +|.- .+.+.+ ..
T Consensus 1219 l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s-~~~p~ls~~~Ps~ 1297 (1431)
T KOG1240|consen 1219 LVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWAS-DGAPILSYALPSN 1297 (1431)
T ss_pred EEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcC-CCCcchhhhcccc
Confidence 9999988522234566554443321 1122111 123333 33 456788888 66632 3433 111111 00
Q ss_pred ----c-------cccccCCCeEEEEeeCCeEEEEeCCCCce
Q 002615 762 ----P-------CTSFALPSQVLICSRNGSIYSFEQESGNL 791 (900)
Q Consensus 762 ----~-------~~~~~~~~~l~~g~~dg~l~~~d~~tG~~ 791 (900)
| +.....++.++.|+.|+.|..||...-+.
T Consensus 1298 ~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1298 DARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEI 1338 (1431)
T ss_pred cCCCCCcccceeeecccCCceeeecCCccceeeccCCCccc
Confidence 1 11234467788999999999999766543
No 335
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.88 E-value=0.0012 Score=64.96 Aligned_cols=263 Identities=9% Similarity=0.029 Sum_probs=146.3
Q ss_pred eeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECC-----------C---Ce---------
Q 002615 606 CYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFR-----------N---YR--------- 662 (900)
Q Consensus 606 ~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~-----------~---g~--------- 662 (900)
+.|.+-..|..++|+.+-+|..+....-+..+.+.+..+.+++.|++...|... + ++
T Consensus 167 SADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~ 246 (481)
T KOG0300|consen 167 SADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEH 246 (481)
T ss_pred ccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccc
Confidence 446667777888888888777665555555666666777888888766555411 0 00
Q ss_pred -----------------EEEeeccCCc-cccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeee
Q 002615 663 -----------------CVYKLPCGGS-IFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCIT 724 (900)
Q Consensus 663 -----------------~~w~~~~~~~-~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~ 724 (900)
++-.+..+.. +.++-.+. .++.++.++++..-..||.++ |+++-....+..........
T Consensus 247 ~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEt--ge~v~~LtGHd~ELtHcstH 323 (481)
T KOG0300|consen 247 NRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVET--GEVVNILTGHDSELTHCSTH 323 (481)
T ss_pred ccccccccccCCceeeeeeeeeeccccceEehhhhc-Ccceeeeeeccccceeeeecc--CceeccccCcchhccccccC
Confidence 0000000001 11111122 246677888999888999888 88776655444333333333
Q ss_pred eCCCEEEEEeecCcEEEEC-CCCCE-EeeecCC-CceeccccccccCCCeEEEEeeCCeEEEEeCCCCc-eeeEEecCCc
Q 002615 725 SANRHVICCLVDGHVVALD-SSGSI-IWRCRTG-GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN-LLWEYSVGDP 800 (900)
Q Consensus 725 ~~~~~i~~~~~~g~v~~~d-~~G~~-~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~-~~w~~~~~~~ 800 (900)
+....++..+.|..+..|| ...-. +-.+... ..+.+ +.+..++.++.|+.|.++.+||..+-. .+-++...++
T Consensus 324 ptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS---~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~ 400 (481)
T KOG0300|consen 324 PTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTS---VVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSP 400 (481)
T ss_pred CcceEEEEeccCceeEeccchhhcceeeeecccccceeE---EEEecCCceeecCCCceEEEeeeccccCcceeeecCCc
Confidence 4455666667777777777 32111 1111111 11111 124457789999999999999987642 3445555444
Q ss_pred eecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceeeC----C
Q 002615 801 ITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMIG----G 876 (900)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~~----~ 876 (900)
+...... .....|.+.-++..|++||.+........... -.-+..+++..+..+ .
T Consensus 401 ~NRvavs------------~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrts---------RqgHrRMV~c~AW~eehp~c 459 (481)
T KOG0300|consen 401 ANRVAVS------------KGHPIIAIPHDNRQVRLFDLNGNRLARLPRTS---------RQGHRRMVTCCAWLEEHPAC 459 (481)
T ss_pred cceeEee------------cCCceEEeccCCceEEEEecCCCccccCCccc---------ccccceeeeeeeccccCccc
Confidence 3222211 11446777778888999999854222211110 011122333333222 4
Q ss_pred EEEEeeeCCeEEEEEcccc
Q 002615 877 RVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 877 ~l~vg~~dg~l~~ld~~tg 895 (900)
.||.++.|..++-|+..+-
T Consensus 460 nLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 460 NLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred ccccccccceeeeeEeccc
Confidence 6888888999999887654
No 336
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.86 E-value=0.0018 Score=61.64 Aligned_cols=233 Identities=11% Similarity=0.119 Sum_probs=131.3
Q ss_pred eeEecCCCEEEEEeeCCEEEEEECCCCcE---EEEEecCCceeeeeeE-eC-CCCEEEEecCCCeEEEEECCCCeEEEee
Q 002615 593 AAVLADFSQVVVGCYKGKIYFLDYLTGDI---YWTFQTCGEVKCQPVV-DA-PRQLIWCGSHDHNLYALDFRNYRCVYKL 667 (900)
Q Consensus 593 ~~~~~~~~~i~vg~~dg~l~~~d~~tG~~---~w~~~~~~~~~~~~~~-~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~ 667 (900)
+.+.-.+.+|...+.|+.|..|...++.. +-....+........+ .+ .++.|..+++||.+..|...+| .|..
T Consensus 17 a~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g--~w~k 94 (299)
T KOG1332|consen 17 AQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENG--RWTK 94 (299)
T ss_pred hhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCC--chhh
Confidence 34444567888999999999998765432 3333333332223233 22 3456677899999999998887 5653
Q ss_pred cc----CCccccCceeec--cCCEEEEEeCCCcEEEEEcCCCCceeeeEe----ecCCcceeeeee--------------
Q 002615 668 PC----GGSIFGSPAIDE--VHDVLYVASTSGRLTAISVKALPFHTLWLH----ELEVPAFASLCI-------------- 723 (900)
Q Consensus 668 ~~----~~~~~~~~~~~~--~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~----~~~~~~~~s~~~-------------- 723 (900)
.. +.....+....+ -+-.|.+++.||.+..++.++. | .|.. ..+.....+...
T Consensus 95 ~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g--~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~ 171 (299)
T KOG1332|consen 95 AYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-G--GWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGP 171 (299)
T ss_pred hhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-C--CccchhhhhccccccceeeecCcCCCccccccCc
Confidence 22 222222222222 1245788999999999988763 2 2221 111111111111
Q ss_pred eeCCCEEEEEeecCcEEEEC-CCCCEEeeecC--CC------ceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeE
Q 002615 724 TSANRHVICCLVDGHVVALD-SSGSIIWRCRT--GG------PIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWE 794 (900)
Q Consensus 724 ~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~--~~------~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~ 794 (900)
...-.++..|+.|..+-+++ .++ .|.... .+ .+.-.|.+.. ....|..++.||++..|-.....-.|+
T Consensus 172 ~~~~krlvSgGcDn~VkiW~~~~~--~w~~e~~l~~H~dwVRDVAwaP~~gl-~~s~iAS~SqDg~viIwt~~~e~e~wk 248 (299)
T KOG1332|consen 172 AAKVKRLVSGGCDNLVKIWKFDSD--SWKLERTLEGHKDWVRDVAWAPSVGL-PKSTIASCSQDGTVIIWTKDEEYEPWK 248 (299)
T ss_pred ccccceeeccCCccceeeeecCCc--chhhhhhhhhcchhhhhhhhccccCC-CceeeEEecCCCcEEEEEecCccCccc
Confidence 11124677888888888888 555 343321 11 1122221111 234688889999999998663335676
Q ss_pred EecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 795 YSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
..+-.+.. .+. ...+....++.+.++..|+++.+|..+.
T Consensus 249 ~tll~~f~-~~~-------w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 249 KTLLEEFP-DVV-------WRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred ccccccCC-cce-------EEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 55444311 111 1122334489999999999999997763
No 337
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=97.86 E-value=0.0091 Score=64.50 Aligned_cols=293 Identities=17% Similarity=0.201 Sum_probs=156.2
Q ss_pred cccccccc--ccccccceEEe-----eCCceEEEEecCCCeEEEEECCCCc-----EEEEEecCCcee---eceeEec-C
Q 002615 535 ELWKVHME--SCVDASPLVVL-----KDSDIYLFVGSHSHKFICADAKRSS-----VLWEIKLEGRIE---CSAAVLA-D 598 (900)
Q Consensus 535 ~~W~~~~~--~~v~~sp~v~~-----~~~~~~v~igs~~g~l~~~d~~tG~-----~~w~~~~~~~~~---~~~~~~~-~ 598 (900)
.-|+...+ ...+...+.+. .++...|++||++|.|..|++..+. ++-+..+...|. +..-++. +
T Consensus 8 ewWst~~~~~e~~d~~~l~v~~~~~~~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~ 87 (418)
T PF14727_consen 8 EWWSTKCGENEEFDQGSLCVGNLDNSPSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSE 87 (418)
T ss_pred heeeccCCCCCcCcCceEEEEcccCCCCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCC
Confidence 34776653 33444444442 2356799999999999999996544 333344443321 1111111 1
Q ss_pred CCEEEEEeeCC-EEEEEECCCCc-----E-----EEEEecC--CceeeeeeEeC--CCCEEEEecCCCeEEEEECCCCeE
Q 002615 599 FSQVVVGCYKG-KIYFLDYLTGD-----I-----YWTFQTC--GEVKCQPVVDA--PRQLIWCGSHDHNLYALDFRNYRC 663 (900)
Q Consensus 599 ~~~i~vg~~dg-~l~~~d~~tG~-----~-----~w~~~~~--~~~~~~~~~~~--~~~~i~~gs~dg~l~~~d~~~g~~ 663 (900)
...+.|-.-.. .+|.+-..+|. . ....... ....+...+.. +...|.+-+.||.|..|+.+. .
T Consensus 88 ~~~LaVLhP~kl~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~--~ 165 (418)
T PF14727_consen 88 DLQLAVLHPRKLSVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES--F 165 (418)
T ss_pred cceEEEecCCEEEEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc--E
Confidence 11233321111 23433333333 1 1111111 11111111211 145677889999999998654 3
Q ss_pred EEeeccCCccccCc-eeeccCCEEEEEeCCCcEEEEEcC---------------------CCCceeeeEeecCCcceeee
Q 002615 664 VYKLPCGGSIFGSP-AIDEVHDVLYVASTSGRLTAISVK---------------------ALPFHTLWLHELEVPAFASL 721 (900)
Q Consensus 664 ~w~~~~~~~~~~~~-~~~~~~~~l~v~t~~g~l~~~~~~---------------------~~~g~~~w~~~~~~~~~~s~ 721 (900)
......++.....| ++....+.+++++.+..+.+|... ...-..-|++..+.....-.
T Consensus 166 ~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~ 245 (418)
T PF14727_consen 166 AFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQ 245 (418)
T ss_pred EEEEEcCCCCCCcCeEEeecCCEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEE
Confidence 33333333333333 333345677888877778777521 11123568888887664322
Q ss_pred eeee--C-CCEEEEEeecCcEEEECCCCCEEeeecCCCceecccc--ccccCC----CeEEEEeeCCeEEEEeCCCCcee
Q 002615 722 CITS--A-NRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPC--TSFALP----SQVLICSRNGSIYSFEQESGNLL 792 (900)
Q Consensus 722 ~~~~--~-~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~--~~~~~~----~~l~~g~~dg~l~~~d~~tG~~~ 792 (900)
.+.. . ...++.| ...+++++.+|++.|..+.+....+... +....+ ..+.+++.++.+..|. +.+++
T Consensus 246 v~~~~~~~~~IvvLg--er~Lf~l~~~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~--d~~L~ 321 (418)
T PF14727_consen 246 VVRFSSSESDIVVLG--ERSLFCLKDNGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE--DTTLV 321 (418)
T ss_pred EEEcCCCCceEEEEe--cceEEEEcCCCeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEe--CCeEE
Confidence 2221 1 2334444 4689999988999998876554322211 101111 2489999999999995 57899
Q ss_pred eEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 793 WEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 793 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
|.-++.....+.... ......+.|.+=+.+|.|.+--..+.
T Consensus 322 WsA~l~~~PVal~v~---------~~~~~~G~IV~Ls~~G~L~v~YLGTd 362 (418)
T PF14727_consen 322 WSAQLPHVPVALSVA---------NFNGLKGLIVSLSDEGQLSVSYLGTD 362 (418)
T ss_pred EecCCCCCCEEEEec---------ccCCCCceEEEEcCCCcEEEEEeCCC
Confidence 988875543322111 11122677888888898877766544
No 338
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=97.85 E-value=0.0049 Score=60.08 Aligned_cols=228 Identities=16% Similarity=0.100 Sum_probs=132.7
Q ss_pred eCCceEEEEec-CCCeEEEEECCCCcEEEEEecCCceee-ceeEecCCCEEEEEeeCCEEEEEECCCCcEE-EEEec--C
Q 002615 554 KDSDIYLFVGS-HSHKFICADAKRSSVLWEIKLEGRIEC-SAAVLADFSQVVVGCYKGKIYFLDYLTGDIY-WTFQT--C 628 (900)
Q Consensus 554 ~~~~~~v~igs-~~g~l~~~d~~tG~~~w~~~~~~~~~~-~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~-w~~~~--~ 628 (900)
.+.++.||.+. ..|.+-.+|+.||+.. .+.++..-.- .+++.+| +..|+......|.++|.+|++.. |.... .
T Consensus 69 papdG~VWft~qg~gaiGhLdP~tGev~-~ypLg~Ga~Phgiv~gpd-g~~Witd~~~aI~R~dpkt~evt~f~lp~~~a 146 (353)
T COG4257 69 PAPDGAVWFTAQGTGAIGHLDPATGEVE-TYPLGSGASPHGIVVGPD-GSAWITDTGLAIGRLDPKTLEVTRFPLPLEHA 146 (353)
T ss_pred cCCCCceEEecCccccceecCCCCCceE-EEecCCCCCCceEEECCC-CCeeEecCcceeEEecCcccceEEeecccccC
Confidence 34678788765 4677889999999986 4666543222 3344445 45787655547999999888764 44332 2
Q ss_pred CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE-EEeeccCCccccCceeeccCCEEEEEeCCC-cEEEEEcCCCCce
Q 002615 629 GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC-VYKLPCGGSIFGSPAIDEVHDVLYVASTSG-RLTAISVKALPFH 706 (900)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~-~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g-~l~~~~~~~~~g~ 706 (900)
....-++++++ .+++|.....|.--.+|+.++.+ +|....++.... +|..+ ++.+|+++..| .|..+|+.+ |.
T Consensus 147 ~~nlet~vfD~-~G~lWFt~q~G~yGrLdPa~~~i~vfpaPqG~gpyG-i~atp-dGsvwyaslagnaiaridp~~--~~ 221 (353)
T COG4257 147 DANLETAVFDP-WGNLWFTGQIGAYGRLDPARNVISVFPAPQGGGPYG-ICATP-DGSVWYASLAGNAIARIDPFA--GH 221 (353)
T ss_pred CCcccceeeCC-CccEEEeeccccceecCcccCceeeeccCCCCCCcc-eEECC-CCcEEEEeccccceEEccccc--CC
Confidence 23345566765 57788766666666788877542 344443433333 33443 47888887544 566777766 42
Q ss_pred eeeEeecCCcce--eeeeeeeCCCEEEEEee-cCcEEEEC-CCCC-EEeeecCCCceeccccccccCCCeEEEE-eeCCe
Q 002615 707 TLWLHELEVPAF--ASLCITSANRHVICCLV-DGHVVALD-SSGS-IIWRCRTGGPIFAGPCTSFALPSQVLIC-SRNGS 780 (900)
Q Consensus 707 ~~w~~~~~~~~~--~s~~~~~~~~~i~~~~~-~g~v~~~d-~~G~-~~w~~~~~~~~~~~~~~~~~~~~~l~~g-~~dg~ 780 (900)
.. .+....... +.-......+.+|+.+. .+.++.|| .+-. ..|.+....+ -...+..+..+.+|+. ..-|.
T Consensus 222 ae-v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~a--rpys~rVD~~grVW~sea~aga 298 (353)
T COG4257 222 AE-VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKA--RPYSMRVDRHGRVWLSEADAGA 298 (353)
T ss_pred cc-eecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCC--CcceeeeccCCcEEeeccccCc
Confidence 11 111111100 11122334678888865 46899999 4332 2244433222 1112345667889985 34577
Q ss_pred EEEEeCCCCce
Q 002615 781 IYSFEQESGNL 791 (900)
Q Consensus 781 l~~~d~~tG~~ 791 (900)
|..||+++-++
T Consensus 299 i~rfdpeta~f 309 (353)
T COG4257 299 IGRFDPETARF 309 (353)
T ss_pred eeecCcccceE
Confidence 89999887655
No 339
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=97.84 E-value=0.028 Score=62.51 Aligned_cols=267 Identities=17% Similarity=0.147 Sum_probs=153.8
Q ss_pred CceEEEEecC-CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE-eeCCEEEEEECCCCcEEE-EEecCCcee
Q 002615 556 SDIYLFVGSH-SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG-CYKGKIYFLDYLTGDIYW-TFQTCGEVK 632 (900)
Q Consensus 556 ~~~~v~igs~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg-~~dg~l~~~d~~tG~~~w-~~~~~~~~~ 632 (900)
.+..++.++. ++.+..|+..+++.......+........+.+++..++++ +.|+.+..||..++.... .+..+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 245 (466)
T COG2319 166 DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV 245 (466)
T ss_pred CCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce
Confidence 3446666665 8999999999888877776655444455666666545555 789999999988787776 344333322
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeE-EEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEe
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRC-VYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLH 711 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~-~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~ 711 (900)
...+.+++..+..++.++.+..||...... ......+........+.+....+..++.++.+..|+..+ .......
T Consensus 246 -~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~ 322 (466)
T COG2319 246 -VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLET--GKLLSSL 322 (466)
T ss_pred -eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCC--CceEEEe
Confidence 224555555777889999999999886654 444422222222223443456677677777788887765 4444443
Q ss_pred e--cCCcceeeeeeeeCC-CEEEEE-eecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEE-EEeeCCeEEEEe
Q 002615 712 E--LEVPAFASLCITSAN-RHVICC-LVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVL-ICSRNGSIYSFE 785 (900)
Q Consensus 712 ~--~~~~~~~s~~~~~~~-~~i~~~-~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~-~g~~dg~l~~~d 785 (900)
. .+........+ ..+ ..+..+ ..++.+..++ ................... ... . ..+. .+..++.+..|+
T Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~ 398 (466)
T COG2319 323 TLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVS-FSP-D-GRVVSSGSTDGTVRLWD 398 (466)
T ss_pred eecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecCCCceeEEecCCceEEEEE-ECC-C-CCEEEEecCCCceEEEe
Confidence 3 22222233333 222 355555 4566677777 4444333332222211111 111 1 2222 256778889998
Q ss_pred CCCCceeeEEecC-CceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 786 QESGNLLWEYSVG-DPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 786 ~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
............. ..+....... .+..++.+..++.+..|+...
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 399 LSTGSLLRNLDGHTSRVTSLDFSP------------DGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred cccCeeeeeccCCCCcEEEEEECC------------CCcEEEEecCCCcEEEEeccC
Confidence 8877766555443 2222222111 255666677888899888763
No 340
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.83 E-value=0.045 Score=57.44 Aligned_cols=190 Identities=11% Similarity=0.142 Sum_probs=97.8
Q ss_pred eeeeeEeCCCCEEEE-ecCC--CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceee
Q 002615 632 KCQPVVDAPRQLIWC-GSHD--HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~-gs~d--g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
.++|++.. +.||. ..++ |+||..|.+........+.. ....--+ ..++.+|++ +..|.+|.||+.+.+ +
T Consensus 228 vS~PmIV~--~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFt-dYY~R~~-nsDGkrIvF-q~~GdIylydP~td~---l 299 (668)
T COG4946 228 VSSPMIVG--ERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFT-DYYPRNA-NSDGKRIVF-QNAGDIYLYDPETDS---L 299 (668)
T ss_pred cCCceEEc--ceEEEEecccCccceEEeccCCchhhhcCCch-hcccccc-CCCCcEEEE-ecCCcEEEeCCCcCc---c
Confidence 34555553 44554 4444 57888886543332222211 1111111 122355554 456889999998733 3
Q ss_pred eEeecCCcc--------eeeee-----eee-CCCEEEEEeecCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEE
Q 002615 709 WLHELEVPA--------FASLC-----ITS-ANRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLI 774 (900)
Q Consensus 709 w~~~~~~~~--------~~s~~-----~~~-~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~ 774 (900)
-+.+.+-+. +..+. ... +++++...+ -|..+.++..+...-+....+.+-... + ....+.+.+
T Consensus 300 ekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~~~~iqv~~~~~VrY~r-~-~~~~e~~vi 376 (668)
T COG4946 300 EKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWDGYSIQVGKKGGVRYRR-I-QVDPEGDVI 376 (668)
T ss_pred eeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCCCeeEEcCCCCceEEEE-E-ccCCcceEE
Confidence 333332111 11111 111 233333333 466777763222222332222221111 1 122347888
Q ss_pred EeeCC-eEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcc
Q 002615 775 CSRNG-SIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVT 844 (900)
Q Consensus 775 g~~dg-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~ 844 (900)
|+.|| .|-.+|..+|+..-...--+.+.+... ..++..+.++.....|+++|.++|.-
T Consensus 377 gt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~v------------s~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 377 GTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKV------------SPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred eccCCceEEEEecCCceEEEeeCCccceEEEEE------------cCCCcEEEEEcCceEEEEEEecCCCe
Confidence 99998 899999998887654433333333221 22367899999999999999998843
No 341
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.82 E-value=0.0073 Score=67.72 Aligned_cols=175 Identities=13% Similarity=0.081 Sum_probs=98.1
Q ss_pred EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecC---CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEE
Q 002615 610 KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSH---DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVL 686 (900)
Q Consensus 610 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~---dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l 686 (900)
.|+.+|...+... .+..+......|.+.+++..|+..+. +..||.||..+|+........+ ....+...+++..|
T Consensus 183 ~l~~~d~dg~~~~-~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g-~~~~~~~SPDG~~l 260 (435)
T PRK05137 183 RLAIMDQDGANVR-YLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPG-MTFAPRFSPDGRKV 260 (435)
T ss_pred EEEEECCCCCCcE-EEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCC-cccCcEECCCCCEE
Confidence 6888886544433 33334445567888887777666543 4679999999887643333333 34466777766676
Q ss_pred EEE-eCCC--cEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeec---CcEEEEC-CCCCEEeeecCCCcee
Q 002615 687 YVA-STSG--RLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVD---GHVVALD-SSGSIIWRCRTGGPIF 759 (900)
Q Consensus 687 ~v~-t~~g--~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~---g~v~~~d-~~G~~~w~~~~~~~~~ 759 (900)
++. +.+| .|+.+|+++ +.. .+..........+.+.+++..++..+.. ..|+.+| .+++.. ++.......
T Consensus 261 a~~~~~~g~~~Iy~~d~~~--~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~ 336 (435)
T PRK05137 261 VMSLSQGGNTDIYTMDLRS--GTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRY 336 (435)
T ss_pred EEEEecCCCceEEEEECCC--Cce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcc
Confidence 544 4343 488889876 443 2222222222445667777777766532 2588888 544432 232221112
Q ss_pred ccccccccCCCeEEEEeeC---CeEEEEeCCCCce
Q 002615 760 AGPCTSFALPSQVLICSRN---GSIYSFEQESGNL 791 (900)
Q Consensus 760 ~~~~~~~~~~~~l~~g~~d---g~l~~~d~~tG~~ 791 (900)
..+..+. .++.|++.+.+ ..++.+|.+++..
T Consensus 337 ~~~~~Sp-dG~~ia~~~~~~~~~~i~~~d~~~~~~ 370 (435)
T PRK05137 337 STPVWSP-RGDLIAFTKQGGGQFSIGVMKPDGSGE 370 (435)
T ss_pred cCeEECC-CCCEEEEEEcCCCceEEEEEECCCCce
Confidence 2222222 34456555433 2588888765543
No 342
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.79 E-value=0.00018 Score=79.05 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=93.2
Q ss_pred CceEEEEecCCCeEEEEECCC---CcEEEEEecCCceeeceeEecC-CCEEEEEeeCCEEEEEECCCCcEEEEEecCCce
Q 002615 556 SDIYLFVGSHSHKFICADAKR---SSVLWEIKLEGRIECSAAVLAD-FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~~~-~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
..+.|+..+..|.|.+||+.. .+.+-.+.-+.|-..+..+..- -..|+.|+.||.|.+||.+..+-.-++....+.
T Consensus 99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES 178 (839)
T KOG0269|consen 99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES 178 (839)
T ss_pred hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence 456778888899999999875 3333344555565455555442 346888999999999999877665555443322
Q ss_pred eeeeeEeCC-CCEEEEecCCCeEEEEECCC-CeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 632 KCQPVVDAP-RQLIWCGSHDHNLYALDFRN-YRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 632 ~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~-g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
.--..+.+. ...+..+..+|.|..||+.. .++..++..+.......-..++...|..|+.|+.+..||..+
T Consensus 179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~ 251 (839)
T KOG0269|consen 179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTD 251 (839)
T ss_pred hhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccC
Confidence 222223333 34455566678899999864 233333444444444444555456667777889999999764
No 343
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.78 E-value=0.0061 Score=68.19 Aligned_cols=180 Identities=15% Similarity=0.151 Sum_probs=106.3
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE-eeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG-CYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg-~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|..+|+.......... ..++.++++++.+++. +.++ .||.+|..+++..-. .........+.+.+++..
T Consensus 214 ~~i~v~d~~~g~~~~~~~~~~~-~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~s~dg~~ 291 (417)
T TIGR02800 214 PEIYVQDLATGQREKVASFPGM-NGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRL-TNGPGIDTEPSWSPDGKS 291 (417)
T ss_pred cEEEEEECCCCCEEEeecCCCC-ccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEEC-CCCCCCCCCEEECCCCCE
Confidence 4799999999876543333332 3357888888877654 3333 599999888865422 222233345566666666
Q ss_pred EEEecC-C--CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC---cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWCGSH-D--HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG---RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~gs~-d--g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g---~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++.+. + ..||.+|..+++... ....+.....+.+.+++..+++.+.++ .++.+|+.+ +....... ...
T Consensus 292 l~~~s~~~g~~~iy~~d~~~~~~~~-l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~~~l~~--~~~ 366 (417)
T TIGR02800 292 IAFTSDRGGSPQIYMMDADGGEVRR-LTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGERVLTD--TGL 366 (417)
T ss_pred EEEEECCCCCceEEEEECCCCCEEE-eecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCeEEccC--CCC
Confidence 665543 2 269999988876542 333344445667776677787777654 788888876 43221111 111
Q ss_pred eeeeeeeeCCCEEEEEeecC---cEEEECCCCCEEeeec
Q 002615 718 FASLCITSANRHVICCLVDG---HVVALDSSGSIIWRCR 753 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g---~v~~~d~~G~~~w~~~ 753 (900)
...+.+.++++.++..+.++ .++.++.+|+....+.
T Consensus 367 ~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~ 405 (417)
T TIGR02800 367 DESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLP 405 (417)
T ss_pred CCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECC
Confidence 23445666677776665543 2344445666555443
No 344
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=97.75 E-value=0.0037 Score=69.86 Aligned_cols=260 Identities=13% Similarity=0.147 Sum_probs=131.9
Q ss_pred EEEEEECCCC-cEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE--EEeeccCCccccCce-----e-e
Q 002615 610 KIYFLDYLTG-DIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC--VYKLPCGGSIFGSPA-----I-D 680 (900)
Q Consensus 610 ~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~--~w~~~~~~~~~~~~~-----~-~ 680 (900)
.+|.|+.++- ...-.+.....+.+....-.+...+..|+++|.|..||...+.- .+...........++ + .
T Consensus 223 ~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~ 302 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN 302 (555)
T ss_pred eEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence 5777776654 44445555556655444333457788899999999999987755 333322111111111 1 1
Q ss_pred ccCCEEEEEeCCCcEEEEEcCCCCc----eeeeEeec-C---Ccce--eeeee-eeCCCEEEEEeecCcEEEEC-CCCC-
Q 002615 681 EVHDVLYVASTSGRLTAISVKALPF----HTLWLHEL-E---VPAF--ASLCI-TSANRHVICCLVDGHVVALD-SSGS- 747 (900)
Q Consensus 681 ~~~~~l~v~t~~g~l~~~~~~~~~g----~~~w~~~~-~---~~~~--~s~~~-~~~~~~i~~~~~~g~v~~~d-~~G~- 747 (900)
..+..++.++.||.|..|+++...- ...-.... + .... .+..+ ..+...+++|+..|.|+.-+ ...+
T Consensus 303 ~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~ 382 (555)
T KOG1587|consen 303 EHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTP 382 (555)
T ss_pred CCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcc
Confidence 1124488888899999998664110 00000000 0 0000 11111 22356788999999998855 2211
Q ss_pred ---EEee----ec-CCCceeccccccccCCCeEEEEeeCCeEEEEeCC-CCceeeEEecCCc-eeccccccccccccccc
Q 002615 748 ---IIWR----CR-TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQE-SGNLLWEYSVGDP-ITASAYIDEHLQLKLES 817 (900)
Q Consensus 748 ---~~w~----~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~-tG~~~w~~~~~~~-~~~~~~~~~~~~~~~~~ 817 (900)
.+++ +. ..+++.+.....+ ...++..+.|.++..|... .-.++..+..... ++......
T Consensus 383 ~~~~~~~~~~~~~~h~g~v~~v~~nPF--~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSp--------- 451 (555)
T KOG1587|consen 383 APEVSYKGHSTFITHIGPVYAVSRNPF--YPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSP--------- 451 (555)
T ss_pred cccccccccccccccCcceEeeecCCC--ccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcC---------
Confidence 1111 11 1222222221112 2345555558888888765 3333322222222 22211111
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEEEeeeCCeEEEEEcc
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~vg~~dg~l~~ld~~ 893 (900)
..-..++++..+|.|.+||......+ + ..+.+....+...... .+..|.+|...|.++.|++.
T Consensus 452 --trpavF~~~d~~G~l~iWDLl~~~~~-------P----v~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 452 --TRPAVFATVDGDGNLDIWDLLQDDEE-------P----VLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred --cCceEEEEEcCCCceehhhhhccccC-------C----cccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 11456778888999999998743111 0 0111111111111111 25578999999999999875
No 345
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.72 E-value=0.0052 Score=66.18 Aligned_cols=162 Identities=12% Similarity=0.085 Sum_probs=115.0
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCc-----eeec------------------eeEecCCCEEEEEeeCCEEEEEE
Q 002615 559 YLFVGSHSHKFICADAKRSSVLWEIKLEGR-----IECS------------------AAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 559 ~v~igs~~g~l~~~d~~tG~~~w~~~~~~~-----~~~~------------------~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
+....+.+|.+..||..+++..-++.-.-+ +... .-.+.+-..++.|+..|.+..|+
T Consensus 7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys 86 (541)
T KOG4547|consen 7 YFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYS 86 (541)
T ss_pred eEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEE
Confidence 344456788899999988887655432111 1000 01122334577899999999999
Q ss_pred CCCCcEEEEEecCC--ceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCC
Q 002615 616 YLTGDIYWTFQTCG--EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG 693 (900)
Q Consensus 616 ~~tG~~~w~~~~~~--~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g 693 (900)
...|++.|++.++. ..+........-+-||.++.|+.+..|+.++++.+.++.+.....++.++.+++..+.+++ +
T Consensus 87 ~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~ 164 (541)
T KOG4547|consen 87 VAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--R 164 (541)
T ss_pred ecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--c
Confidence 99999999988643 2333333344567799999999999999999998888888888888899988666666654 6
Q ss_pred cEEEEEcCCCCceeeeEeecCCcceeeeeee
Q 002615 694 RLTAISVKALPFHTLWLHELEVPAFASLCIT 724 (900)
Q Consensus 694 ~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~ 724 (900)
.|..||.++ ++.+-++..+.....+..+.
T Consensus 165 ~ik~~~~~~--kevv~~ftgh~s~v~t~~f~ 193 (541)
T KOG4547|consen 165 QIKVLDIET--KEVVITFTGHGSPVRTLSFT 193 (541)
T ss_pred eEEEEEccC--ceEEEEecCCCcceEEEEEE
Confidence 799999998 88888877766555555443
No 346
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.72 E-value=0.0078 Score=67.54 Aligned_cols=174 Identities=13% Similarity=0.176 Sum_probs=103.0
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEe-eCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGC-YKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~-~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..|+.+|..+|+........+ ....+.+++++..+++.. .+| .||.+|..+|+... ..........+.+.+++..
T Consensus 223 ~~l~~~~l~~g~~~~l~~~~g-~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~ 300 (430)
T PRK00178 223 PRIFVQNLDTGRREQITNFEG-LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPAIDTEPFWGKDGRT 300 (430)
T ss_pred CEEEEEECCCCCEEEccCCCC-CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCCCCcCCeEECCCCCE
Confidence 469999999997654322222 233678899988876543 344 69999999887643 2223334455677777777
Q ss_pred EEEecCC---CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCcc
Q 002615 644 IWCGSHD---HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVPA 717 (900)
Q Consensus 644 i~~gs~d---g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~~ 717 (900)
|++.+.. ..||.+|..+|+..... ..+.....+.++++++.|++.+.. + .|+.+|+.+ |+...-... ..
T Consensus 301 i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~~lt~~--~~ 375 (430)
T PRK00178 301 LYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVRILTDT--SL 375 (430)
T ss_pred EEEEECCCCCceEEEEECCCCCEEEee-cCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEEEccCC--CC
Confidence 7665532 36999999888754322 233334456666667777776543 2 477888876 543221111 11
Q ss_pred eeeeeeeeCCCEEEEEeec---CcEEEECCCCC
Q 002615 718 FASLCITSANRHVICCLVD---GHVVALDSSGS 747 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~---g~v~~~d~~G~ 747 (900)
...+.+.+++..++..+.. ..++.++.+|.
T Consensus 376 ~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~ 408 (430)
T PRK00178 376 DESPSVAPNGTMLIYATRQQGRGVLMLVSINGR 408 (430)
T ss_pred CCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence 1244556666666655543 23555554443
No 347
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=97.69 E-value=6.4e-05 Score=51.57 Aligned_cols=39 Identities=36% Similarity=0.668 Sum_probs=27.5
Q ss_pred eeeeeeccCCccccCceeeCCEEEEeeeCCeEEEEEccc
Q 002615 856 QEFAKLELQGDIFSSPVMIGGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 856 ~~~~~~~l~~~~~ss~~~~~~~l~vg~~dg~l~~ld~~t 894 (900)
+++|++++++.+.++|++.++.||+++.+|.|||+|.+|
T Consensus 2 ~~~W~~~~~~~~~~~~~v~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 2 KVLWSYDTGGPIWSSPAVAGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp -EEEEEE-SS---S--EECTSEEEEE-TTSEEEEEETT-
T ss_pred ceeEEEECCCCcCcCCEEECCEEEEEcCCCEEEEEeCCC
Confidence 456778888888899999999999999999999999875
No 348
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=97.69 E-value=0.045 Score=59.28 Aligned_cols=182 Identities=13% Similarity=0.165 Sum_probs=105.1
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcce-eeeeeeeCCCEEEEEeecCcEEEEC-C----------------
Q 002615 683 HDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAF-ASLCITSANRHVICCLVDGHVVALD-S---------------- 744 (900)
Q Consensus 683 ~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~-~s~~~~~~~~~i~~~~~~g~v~~~d-~---------------- 744 (900)
.+.|.|-+.||.+..|+-+. .......+.-.. .....+...+.+++++.+..+.+|. .
T Consensus 145 ~~~IcVQS~DG~L~~feqe~----~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~ 220 (418)
T PF14727_consen 145 RDFICVQSMDGSLSFFEQES----FAFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTE 220 (418)
T ss_pred ceEEEEEecCceEEEEeCCc----EEEEEEcCCCCCCcCeEEeecCCEEEEecCceeEEEecHHHhhhcccccccccccc
Confidence 36789999999999998664 232333332111 1223444556677776666676664 1
Q ss_pred ----CCCE---EeeecCCCceecccccccc-CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccc-cccccccccc
Q 002615 745 ----SGSI---IWRCRTGGPIFAGPCTSFA-LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASA-YIDEHLQLKL 815 (900)
Q Consensus 745 ----~G~~---~w~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~-~~~~~~~~~~ 815 (900)
+++. -|++..+..+....++... ....|++-+ ...++|++ .+|+++|..+++-...+.. +....
T Consensus 221 ~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg-er~Lf~l~-~~G~l~~~krLd~~p~~~~~Y~~~~----- 293 (418)
T PF14727_consen 221 QDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG-ERSLFCLK-DNGSLRFQKRLDYNPSCFCPYRVPW----- 293 (418)
T ss_pred ccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEe-cceEEEEc-CCCeEEEEEecCCceeeEEEEEeec-----
Confidence 2332 4888888876655443322 223344444 45699999 5799999888765443322 11100
Q ss_pred ccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee----eCCEEEEeeeCCeEEEE
Q 002615 816 ESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM----IGGRVFVGCRDDYIYCI 890 (900)
Q Consensus 816 ~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~----~~~~l~vg~~dg~l~~l 890 (900)
.........+.+++.++.+.+|.-. ++.|..+++...++--+. .+|.|.+-+.+|.|-+-
T Consensus 294 ~~~~~~~~~llV~t~t~~LlVy~d~---------------~L~WsA~l~~~PVal~v~~~~~~~G~IV~Ls~~G~L~v~ 357 (418)
T PF14727_consen 294 YNEPSTRLNLLVGTHTGTLLVYEDT---------------TLVWSAQLPHVPVALSVANFNGLKGLIVSLSDEGQLSVS 357 (418)
T ss_pred ccCCCCceEEEEEecCCeEEEEeCC---------------eEEEecCCCCCCEEEEecccCCCCceEEEEcCCCcEEEE
Confidence 0000012358999999999999643 778888775543321111 14666666667766543
No 349
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.68 E-value=0.0065 Score=67.88 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=113.9
Q ss_pred CCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCC---CeEEEEECCCCeEEEeeccCCccccCceeeccCC
Q 002615 608 KGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHD---HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHD 684 (900)
Q Consensus 608 dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~d---g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~ 684 (900)
+..|+.+|...+. ......+......|.+.+++..|++.+.+ ..|+.||..+|+........+ ....+...+++.
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g-~~~~~~wSPDG~ 260 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG-HNGAPAFSPDGS 260 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC-ccCceeECCCCC
Confidence 3578888854333 33333344455678888887777666543 369999999886543333333 233567777667
Q ss_pred EEEEEe-CCCc--EEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEe-ecCc--EEEEC-CCCCEEeeecCCCc
Q 002615 685 VLYVAS-TSGR--LTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCL-VDGH--VVALD-SSGSIIWRCRTGGP 757 (900)
Q Consensus 685 ~l~v~t-~~g~--l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~-~~g~--v~~~d-~~G~~~w~~~~~~~ 757 (900)
.|+++. .+|. |+.+|.++ ++. .+...+......+.+.+++..+++.+ .+|. |+.++ ..+.... .....
T Consensus 261 ~La~~~~~~g~~~Iy~~d~~~--~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~-l~~~~- 335 (429)
T PRK01742 261 RLAFASSKDGVLNIYVMGANG--GTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASL-VGGRG- 335 (429)
T ss_pred EEEEEEecCCcEEEEEEECCC--CCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-ecCCC-
Confidence 777654 4664 66777765 432 22222222334566777777666554 3443 44555 3333321 11111
Q ss_pred eeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 758 IFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 758 ~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
. .+.+ ...+..|++.+.+ .++.+|..+|+....... .. ...+ +..+++..+++++.+|...+|
T Consensus 336 -~-~~~~-SpDG~~ia~~~~~-~i~~~Dl~~g~~~~lt~~-~~-~~~~-----------~~sPdG~~i~~~s~~g~~~~l 398 (429)
T PRK01742 336 -Y-SAQI-SADGKTLVMINGD-NVVKQDLTSGSTEVLSST-FL-DESP-----------SISPNGIMIIYSSTQGLGKVL 398 (429)
T ss_pred -C-CccC-CCCCCEEEEEcCC-CEEEEECCCCCeEEecCC-CC-CCCc-----------eECCCCCEEEEEEcCCCceEE
Confidence 1 1211 1124456666554 477899988875421111 11 1111 123347788888888877777
Q ss_pred Ee
Q 002615 838 RV 839 (900)
Q Consensus 838 d~ 839 (900)
+.
T Consensus 399 ~~ 400 (429)
T PRK01742 399 QL 400 (429)
T ss_pred EE
Confidence 65
No 350
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.68 E-value=0.04 Score=68.13 Aligned_cols=231 Identities=12% Similarity=0.173 Sum_probs=127.9
Q ss_pred CceEEEEec-CCCeEEEEECCCCcEEEEEecCCc--------------eeeceeEecCCCEEEEEee-CCEEEEEECCCC
Q 002615 556 SDIYLFVGS-HSHKFICADAKRSSVLWEIKLEGR--------------IECSAAVLADFSQVVVGCY-KGKIYFLDYLTG 619 (900)
Q Consensus 556 ~~~~v~igs-~~g~l~~~d~~tG~~~w~~~~~~~--------------~~~~~~~~~~~~~i~vg~~-dg~l~~~d~~tG 619 (900)
.++.+||.. .+++|+.+|.. |+..-.....+. .....++..+++.|||... ++.|..+|..++
T Consensus 578 ~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~ 656 (1057)
T PLN02919 578 LNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNE 656 (1057)
T ss_pred CCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCC
Confidence 366777765 46789999976 554433322100 0124556667777888754 467888998777
Q ss_pred cEEEEEecC-------C------c---eeeeeeEeCCCCEEEEe-cCCCeEEEEECCCCeEEEeeccC-------Cc---
Q 002615 620 DIYWTFQTC-------G------E---VKCQPVVDAPRQLIWCG-SHDHNLYALDFRNYRCVYKLPCG-------GS--- 672 (900)
Q Consensus 620 ~~~w~~~~~-------~------~---~~~~~~~~~~~~~i~~g-s~dg~l~~~d~~~g~~~w~~~~~-------~~--- 672 (900)
.+.-....+ + . ......+++.++.+|+. +.++.|+.||..+|...- +... +.
T Consensus 657 ~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~~~~g~~~~ 735 (1057)
T PLN02919 657 TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGYERNLNGSSGT 735 (1057)
T ss_pred EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCccccCCCCccc
Confidence 653211100 0 0 01123455556777776 456789999998876532 1111 00
Q ss_pred --c---ccCceeeccCCEEEEEeC-CCcEEEEEcCCCCceeeeEeec-----------C---C----cce---eeeeeee
Q 002615 673 --I---FGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHTLWLHEL-----------E---V----PAF---ASLCITS 725 (900)
Q Consensus 673 --~---~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~~w~~~~-----------~---~----~~~---~s~~~~~ 725 (900)
. -...+++++++.||++.. ++.|..||+++ +...+.... + . ..+ ....+..
T Consensus 736 ~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~t--g~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~ 813 (1057)
T PLN02919 736 STSFAQPSGISLSPDLKELYIADSESSSIRALDLKT--GGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAK 813 (1057)
T ss_pred cccccCccEEEEeCCCCEEEEEECCCCeEEEEECCC--CcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeC
Confidence 0 112345665667887764 57899999886 443322110 0 0 001 1223333
Q ss_pred CCCEEEEE-eecCcEEEEC-CCCCEEeeecCCCc----------eecccc-ccccCCCeEEEEe-eCCeEEEEeCCCCce
Q 002615 726 ANRHVICC-LVDGHVVALD-SSGSIIWRCRTGGP----------IFAGPC-TSFALPSQVLICS-RNGSIYSFEQESGNL 791 (900)
Q Consensus 726 ~~~~i~~~-~~~g~v~~~d-~~G~~~w~~~~~~~----------~~~~~~-~~~~~~~~l~~g~-~dg~l~~~d~~tG~~ 791 (900)
++.+|++ +.++.|..+| .++.+......+.. .+..|. +....++.+|++. .++.|..||.++++.
T Consensus 814 -dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 814 -DGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred -CCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 3456665 4577899999 66665433322210 122231 2344467788874 577899999998875
No 351
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=97.67 E-value=8.1e-05 Score=50.24 Aligned_cols=37 Identities=41% Similarity=0.706 Sum_probs=32.1
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
+.||+++.+|.|+++|.+||+++|+++.+..+.+.|+
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~~~p~ 37 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGPPVDSSPI 37 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSSGGGSCBE
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCCCCccCcC
Confidence 3689999999999999999999999998877666553
No 352
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=97.66 E-value=6.4e-05 Score=51.56 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=27.8
Q ss_pred cccccccccccccccceEEeeCCceEEEEecCCCeEEEEECCC
Q 002615 534 QELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKR 576 (900)
Q Consensus 534 ~~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~t 576 (900)
+++|+++++..+.++|++ .++.||+++.+|.|+++|++|
T Consensus 2 ~~~W~~~~~~~~~~~~~v----~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 2 KVLWSYDTGGPIWSSPAV----AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp -EEEEEE-SS---S--EE----CTSEEEEE-TTSEEEEEETT-
T ss_pred ceeEEEECCCCcCcCCEE----ECCEEEEEcCCCEEEEEeCCC
Confidence 367999999999999988 789999999999999999875
No 353
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.66 E-value=0.007 Score=69.85 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=82.7
Q ss_pred eeCCceEEEEecCCCeEEEEECCC----------C----cEEEE----EecCCceeeceeEecCCCEEEEEeeCCEEEEE
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKR----------S----SVLWE----IKLEGRIECSAAVLADFSQVVVGCYKGKIYFL 614 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~t----------G----~~~w~----~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~ 614 (900)
+..++.++++||.|..|..|.... | ...|+ +..++.-....+.++++.+++.++.|+.|..|
T Consensus 77 ~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiw 156 (942)
T KOG0973|consen 77 FSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIW 156 (942)
T ss_pred ECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEE
Confidence 556788999999999888888762 1 12343 22333333456778888889999999999999
Q ss_pred ECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCC
Q 002615 615 DYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRN 660 (900)
Q Consensus 615 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~ 660 (900)
|..+.+.+-.+..+...+....+++-+.++.+-++|+.|..|+..+
T Consensus 157 n~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 157 NAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred ccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc
Confidence 9999988877777766666667888888888889999999998655
No 354
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.63 E-value=0.018 Score=60.04 Aligned_cols=205 Identities=15% Similarity=0.145 Sum_probs=112.2
Q ss_pred ceeEecCCC-EEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEE--Eeec
Q 002615 592 SAAVLADFS-QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCV--YKLP 668 (900)
Q Consensus 592 ~~~~~~~~~-~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~--w~~~ 668 (900)
++...++.+ .+|+--..+.|+.||+.+|+.. .+..++.+.+...++ .++.|++..+ .++.++.+++..+ +...
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~~p~~~~~~~~~d-~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~ 104 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETGKKR-VFPSPGGFSSGALID-AGGRLIACEH--GVRLLDPDTGGKITLLAEP 104 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcCceE-EEECCCCcccceeec-CCCeEEEEcc--ccEEEeccCCceeEEeccc
Confidence 455555555 4566667789999998888553 233445554443444 4566665543 4666676666552 2222
Q ss_pred cCCcc---ccCceeeccCCEEEEEeCC------------CcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEE
Q 002615 669 CGGSI---FGSPAIDEVHDVLYVASTS------------GRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICC 733 (900)
Q Consensus 669 ~~~~~---~~~~~~~~~~~~l~v~t~~------------g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~ 733 (900)
..+.. .....+++ .+.+|+++.. |.||.+++. |...-.....-..-...++++++..+|+.
T Consensus 105 ~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~---g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 105 EDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDPD---GGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred cCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcCC---CCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 22211 22223444 5889998876 457777753 22222111111111355677777777776
Q ss_pred e-ecCcEEEEC-C--CCCEE----eeecCCCceeccccccccCCCeEEEEeeCC--eEEEEeCCCCceeeEEecCCceec
Q 002615 734 L-VDGHVVALD-S--SGSII----WRCRTGGPIFAGPCTSFALPSQVLICSRNG--SIYSFEQESGNLLWEYSVGDPITA 803 (900)
Q Consensus 734 ~-~~g~v~~~d-~--~G~~~----w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg--~l~~~d~~tG~~~w~~~~~~~~~~ 803 (900)
. ..+.++.++ . +|.+- +......+ -.......+.++.+|+....+ .|.+|+++ |+++-++.++....+
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~-G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t 258 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEP-GLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPT 258 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCC-CCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCc
Confidence 4 346777776 2 23221 11111000 011122356789999765543 89999998 999988888854444
Q ss_pred ccc
Q 002615 804 SAY 806 (900)
Q Consensus 804 ~~~ 806 (900)
.++
T Consensus 259 ~~~ 261 (307)
T COG3386 259 NPA 261 (307)
T ss_pred cce
Confidence 433
No 355
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.61 E-value=0.0099 Score=56.85 Aligned_cols=230 Identities=14% Similarity=0.114 Sum_probs=123.9
Q ss_pred CceEEEEecCCCeEEEEECCCCc---EEEEEecCCceeeceeEec--CCCEEEEEeeCCEEEEEECCCCcEEEEEe----
Q 002615 556 SDIYLFVGSHSHKFICADAKRSS---VLWEIKLEGRIECSAAVLA--DFSQVVVGCYKGKIYFLDYLTGDIYWTFQ---- 626 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~---~~w~~~~~~~~~~~~~~~~--~~~~i~vg~~dg~l~~~d~~tG~~~w~~~---- 626 (900)
.+.+|...+.|+.|..|...+.. .+-++..+......+.... -|+.+...+|||.+..|.-++| .|+..
T Consensus 22 ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g--~w~k~~e~~ 99 (299)
T KOG1332|consen 22 YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENG--RWTKAYEHA 99 (299)
T ss_pred hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCC--chhhhhhhh
Confidence 35677778888888888865533 3333443433323333332 4556777889999999997777 56422
Q ss_pred cCCceeeeeeEeC--CCCEEEEecCCCeEEEEECCCCeEEEee----cc---C-CccccCceeec----------cCCEE
Q 002615 627 TCGEVKCQPVVDA--PRQLIWCGSHDHNLYALDFRNYRCVYKL----PC---G-GSIFGSPAIDE----------VHDVL 686 (900)
Q Consensus 627 ~~~~~~~~~~~~~--~~~~i~~gs~dg~l~~~d~~~g~~~w~~----~~---~-~~~~~~~~~~~----------~~~~l 686 (900)
.+.....+..+.+ .+-.|.+++.||.|..++.++- -.|.. .+ + ..+...|...+ .-.++
T Consensus 100 ~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krl 178 (299)
T KOG1332|consen 100 AHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-GGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRL 178 (299)
T ss_pred hhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-CCccchhhhhccccccceeeecCcCCCccccccCccccccee
Confidence 2222222223332 2446888999999988876543 11211 11 1 11111221111 02457
Q ss_pred EEEeCCCcEEEEEcCCCCceeeeEeec----CCccee----eeeeeeCCCEEEEEeecCcEEEECCCCC-EEeeecCCCc
Q 002615 687 YVASTSGRLTAISVKALPFHTLWLHEL----EVPAFA----SLCITSANRHVICCLVDGHVVALDSSGS-IIWRCRTGGP 757 (900)
Q Consensus 687 ~v~t~~g~l~~~~~~~~~g~~~w~~~~----~~~~~~----s~~~~~~~~~i~~~~~~g~v~~~d~~G~-~~w~~~~~~~ 757 (900)
..|..|..+..|..++ + .|..+. +..... .|........+..++.||++..+..+.+ .-|+.+.-.+
T Consensus 179 vSgGcDn~VkiW~~~~--~--~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~ 254 (299)
T KOG1332|consen 179 VSGGCDNLVKIWKFDS--D--SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE 254 (299)
T ss_pred eccCCccceeeeecCC--c--chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc
Confidence 7788888888888776 4 454332 221111 1222122346788889999999982222 3466554333
Q ss_pred eeccccc---cccCCCeEEEEeeCCeEEEEeCCCCceeeE
Q 002615 758 IFAGPCT---SFALPSQVLICSRNGSIYSFEQESGNLLWE 794 (900)
Q Consensus 758 ~~~~~~~---~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~ 794 (900)
|..++. ....++.|-++..|+.+.+|- ++..=.|+
T Consensus 255 -f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk-e~~~Gkw~ 292 (299)
T KOG1332|consen 255 -FPDVVWRVSWSLSGNILAVSGGDNKVTLWK-ENVDGKWE 292 (299)
T ss_pred -CCcceEEEEEeccccEEEEecCCcEEEEEE-eCCCCcEE
Confidence 111110 122345666677778888886 33443443
No 356
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=97.59 E-value=0.064 Score=60.84 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=108.0
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCC------ceeeceeEecCCCEEEEEeeCCEEEEEECCCC---c------EEEE
Q 002615 560 LFVGSHSHKFICADAKRSSVLWEIKLEG------RIECSAAVLADFSQVVVGCYKGKIYFLDYLTG---D------IYWT 624 (900)
Q Consensus 560 v~igs~~g~l~~~d~~tG~~~w~~~~~~------~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG---~------~~w~ 624 (900)
.....+...++.|+..++. |.....+ ....+..+++++.++.+|..||.|..|. .-| . +.|.
T Consensus 174 ~~~i~~~~~~~~~~v~~~~--~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~-d~~~~~~~~t~t~lHWH 250 (792)
T KOG1963|consen 174 FKGIVHMCKIHIYFVPKHT--KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWR-DFGSSDDSETCTLLHWH 250 (792)
T ss_pred EEEEEEeeeEEEEEecccc--eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEe-ccccccccccceEEEec
Confidence 3333455558888877665 4332221 1124567888988999999999999996 333 1 2343
Q ss_pred EecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCC
Q 002615 625 FQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALP 704 (900)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~ 704 (900)
+.++ ....+..++.+||.|+..+-+..|...+++...--.+++.+... ++.++++...+...|..+..+...+
T Consensus 251 ---~~~V-~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i-~vS~ds~~~sl~~~DNqI~li~~~d-- 323 (792)
T KOG1963|consen 251 ---HDEV-NSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHI-VVSPDSDLYSLVLEDNQIHLIKASD-- 323 (792)
T ss_pred ---cccc-ceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEE-EEcCCCCeEEEEecCceEEEEeccc--
Confidence 1233 34566678899999999999999999998844433444444333 3334455555555677777776533
Q ss_pred ceeeeEeecC-----------CcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeec
Q 002615 705 FHTLWLHELE-----------VPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCR 753 (900)
Q Consensus 705 g~~~w~~~~~-----------~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~ 753 (900)
.+..-....- ........+.+.-+.+...+..|.|..|| .+.+.+.++.
T Consensus 324 l~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~ 384 (792)
T KOG1963|consen 324 LEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQ 384 (792)
T ss_pred hhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEE
Confidence 2222221111 11112333444345566666788888888 5555555543
No 357
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.59 E-value=0.0001 Score=83.49 Aligned_cols=88 Identities=19% Similarity=0.351 Sum_probs=56.1
Q ss_pred EecCceEEEcc--CC--cEEEEcccCCcEEECceeeChHHHHHHHhCC-----CCeeEEEEEEeecCCceEEEEEEEEec
Q 002615 220 FRTGDFARRIQ--SG--DLVFLGRKDRTIKINGQRMALEEIEHTLRGH-----PDVVDTAVVSHKHQGELVILVAFIVLK 290 (900)
Q Consensus 220 ~~TGDl~~~~~--~G--~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~-----~~v~~~~v~~~~~~~~~~~l~~~v~~~ 290 (900)
|+.||+++... ++ .+.|+||.+.++.+.|+++.-.+|+.++.+. -.+.+..+............+.++++.
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~ 450 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELE 450 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEEC
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeC
Confidence 99999999742 34 7999999999999999999999999998874 345566665552222223566677776
Q ss_pred CCCCchHHHHHHHHHHHHhhC
Q 002615 291 EKKTSSEIFLSSIKSWVSSKL 311 (900)
Q Consensus 291 ~~~~~~~~~~~~l~~~l~~~l 311 (900)
... ...+.+.+.+.+.|
T Consensus 451 ~~~----~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 451 GEP----DDLEELAKALDESL 467 (528)
T ss_dssp S-H----HHHHHHHHHHHHCS
T ss_pred CCc----hHHHHHHHHHHHHh
Confidence 552 12334444454444
No 358
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=97.59 E-value=0.036 Score=62.78 Aligned_cols=265 Identities=14% Similarity=0.176 Sum_probs=146.7
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCC---CEEEEEeeCCEEEEEECCCCcEEEEEecCCc
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADF---SQVVVGCYKGKIYFLDYLTGDIYWTFQTCGE 630 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~---~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~ 630 (900)
+.+..++++-+ ...|..|-..||++.-....+.....+..+.+.. .++|+.+.+|.|..||-..|+++..+..+..
T Consensus 25 SnD~k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~ 103 (792)
T KOG1963|consen 25 SNDAKFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLP 103 (792)
T ss_pred ccCCcEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCc
Confidence 33455666554 4569999999999876444333322333443322 4678899999999999999999988877655
Q ss_pred eeee---eeEeCCCCEEEEecCCCe-EEEEECCCCeEEEeeccC------C-----ccccCceeeccCCEEEEEeCCCcE
Q 002615 631 VKCQ---PVVDAPRQLIWCGSHDHN-LYALDFRNYRCVYKLPCG------G-----SIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 631 ~~~~---~~~~~~~~~i~~gs~dg~-l~~~d~~~g~~~w~~~~~------~-----~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
+... |...+..-.++++..+.. ++....+..+....+... + ...-.+..+...+.+.....+..+
T Consensus 104 v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~ 183 (792)
T KOG1963|consen 104 VHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKI 183 (792)
T ss_pred eeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeE
Confidence 4332 222222333444443322 222222222221111110 0 001122333333433333344557
Q ss_pred EEEEcCCCCceeeeEeec------CCcceeeeeeeeCCCEEEEEeecCcEEEECCCC---C------EEeeecC-CCcee
Q 002615 696 TAISVKALPFHTLWLHEL------EVPAFASLCITSANRHVICCLVDGHVVALDSSG---S------IIWRCRT-GGPIF 759 (900)
Q Consensus 696 ~~~~~~~~~g~~~w~~~~------~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G---~------~~w~~~~-~~~~~ 759 (900)
+.|+... +. |.... +...+....+.+.+..+.+|..+|.|..+...| . .-|.... ..-.+
T Consensus 184 ~~~~v~~--~~--~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~f 259 (792)
T KOG1963|consen 184 HIYFVPK--HT--KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSF 259 (792)
T ss_pred EEEEecc--cc--eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEE
Confidence 7777665 22 22211 111123445566677777888889998887222 1 2254321 11112
Q ss_pred ccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 760 AGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 760 ~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
+ ..+..||.|...|.+..|..+|++...=-.+++++....... ++....+...|+.|.++..
T Consensus 260 S------~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~------------ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 260 S------SDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSP------------DSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred e------cCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcC------------CCCeEEEEecCceEEEEec
Confidence 2 235689999999999999999998554445566554433332 2677777888999999877
Q ss_pred ec
Q 002615 840 NL 841 (900)
Q Consensus 840 ~~ 841 (900)
.+
T Consensus 322 ~d 323 (792)
T KOG1963|consen 322 SD 323 (792)
T ss_pred cc
Confidence 43
No 359
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.53 E-value=0.055 Score=60.18 Aligned_cols=221 Identities=12% Similarity=0.088 Sum_probs=117.6
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCE---EEEEeeC--CEEEEEECCCCcEEEEEecCCceeeeeeEeCCC
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQ---VVVGCYK--GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPR 641 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~---i~vg~~d--g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~ 641 (900)
..|+..|.+.++.. .+........++.+++|+.. +|+...+ ..||..++.+|+..-.....+. ...|.+++++
T Consensus 165 ~~l~~~d~dG~~~~-~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~-~~~p~wSPDG 242 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGN-QLMPTFSPRK 242 (428)
T ss_pred ceEEEEcCCCCCce-EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCC-ccceEECCCC
Confidence 36777787655443 23323333457899999864 3344333 3699999988876543333333 3457788877
Q ss_pred CEEEEec-CCC--eEEE--EECCC---CeEEEeeccCCccccCceeeccCCEEEEEeC-CC--cEEEEEcCCCCceeeeE
Q 002615 642 QLIWCGS-HDH--NLYA--LDFRN---YRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SG--RLTAISVKALPFHTLWL 710 (900)
Q Consensus 642 ~~i~~gs-~dg--~l~~--~d~~~---g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g--~l~~~~~~~~~g~~~w~ 710 (900)
..|+..+ .+| .+|. |+..+ |+..............|...+++..|++.+. +| .++.++.....+. .-.
T Consensus 243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~-~~~ 321 (428)
T PRK01029 243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS-PRL 321 (428)
T ss_pred CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc-eEE
Confidence 6665543 222 3444 56554 3333333222234456788877776766553 44 4777766431122 111
Q ss_pred eecCCcceeeeeeeeCCCEEEEEeec---CcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEee---CCeEEE
Q 002615 711 HELEVPAFASLCITSANRHVICCLVD---GHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSR---NGSIYS 783 (900)
Q Consensus 711 ~~~~~~~~~s~~~~~~~~~i~~~~~~---g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~l~~ 783 (900)
..........+..+++++.++..... ..|+.+| .+|+.. .+.........+.... ++..|++.+. ...||.
T Consensus 322 lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSp-DG~~L~f~~~~~g~~~L~~ 399 (428)
T PRK01029 322 LTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAI-DSLHLVYSAGNSNESELYL 399 (428)
T ss_pred eccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECC-CCCEEEEEECCCCCceEEE
Confidence 22222223456677788877665443 3588889 677653 2221111112222211 2334554432 346888
Q ss_pred EeCCCCcee
Q 002615 784 FEQESGNLL 792 (900)
Q Consensus 784 ~d~~tG~~~ 792 (900)
+|..+|+..
T Consensus 400 vdl~~g~~~ 408 (428)
T PRK01029 400 ISLITKKTR 408 (428)
T ss_pred EECCCCCEE
Confidence 888877654
No 360
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=97.52 E-value=0.00025 Score=47.86 Aligned_cols=37 Identities=30% Similarity=0.534 Sum_probs=32.4
Q ss_pred CEEEEecCCCeEEEEECCCCeEEEeeccCCccccCce
Q 002615 642 QLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPA 678 (900)
Q Consensus 642 ~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~ 678 (900)
+.||+++.+|.|+++|.++|+.+|+++.+....+.|+
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~~~p~ 37 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGPPVDSSPI 37 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSSGGGSCBE
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCCCCccCcC
Confidence 4689999999999999999999999998877766653
No 361
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.47 E-value=0.00042 Score=79.91 Aligned_cols=229 Identities=16% Similarity=0.147 Sum_probs=130.5
Q ss_pred eEEEEecCCCeEEEEECCC---CcE---EEEEec-CCceeeceeEecCCC-EEEEEeeCCEEEEEECCCCcEEEEEe---
Q 002615 558 IYLFVGSHSHKFICADAKR---SSV---LWEIKL-EGRIECSAAVLADFS-QVVVGCYKGKIYFLDYLTGDIYWTFQ--- 626 (900)
Q Consensus 558 ~~v~igs~~g~l~~~d~~t---G~~---~w~~~~-~~~~~~~~~~~~~~~-~i~vg~~dg~l~~~d~~tG~~~w~~~--- 626 (900)
|.|.-|..||.|..||+.. +.. +-++.. .+.+ ...-+....+ .+..|..+|.|+.||..+-+.-.+..
T Consensus 81 GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V-~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~ 159 (1049)
T KOG0307|consen 81 GLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPV-LGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA 159 (1049)
T ss_pred ceeeccccCCceEEecchhhccCcchHHHhhhcccCCce-eeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC
Confidence 5566677899999999875 211 111111 2222 2234444433 77888899999999987643322221
Q ss_pred cCCceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeEEEeeccCCc-c-ccCceeecc-CCEEEEEeCCC---cEEEEE
Q 002615 627 TCGEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS-I-FGSPAIDEV-HDVLYVASTSG---RLTAIS 699 (900)
Q Consensus 627 ~~~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~-~-~~~~~~~~~-~~~l~v~t~~g---~l~~~~ 699 (900)
..+.+.+ ..+... ..++..++.+|....||++..+.+-++...+. . .+.....++ ...|++++.+. .+..||
T Consensus 160 ~~~eI~~-lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWD 238 (1049)
T KOG0307|consen 160 PPSEIKC-LSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWD 238 (1049)
T ss_pred CcccceE-eccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeec
Confidence 1112221 112111 12244567788999999988777666544332 2 223333332 24578887654 456677
Q ss_pred cCCCCceeeeEeecCCcceeeeeeeeCC-CEEEEEeecCcEEEEC-CCCCEEeeecCCCc-eeccccccccCCCeEEEEe
Q 002615 700 VKALPFHTLWLHELEVPAFASLCITSAN-RHVICCLVDGHVVALD-SSGSIIWRCRTGGP-IFAGPCTSFALPSQVLICS 776 (900)
Q Consensus 700 ~~~~~g~~~w~~~~~~~~~~s~~~~~~~-~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~-~~~~~~~~~~~~~~l~~g~ 776 (900)
++.. -.++..+..+.....+...+..+ ..++.+..|+.++|++ .+|+++.++...+. .+... ..--..+.+-+.+
T Consensus 239 lR~a-ssP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~-w~pr~P~~~A~as 316 (1049)
T KOG0307|consen 239 LRFA-SSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQ-WCPRNPSVMAAAS 316 (1049)
T ss_pred cccc-CCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeee-ecCCCcchhhhhe
Confidence 5431 22333344444444555555555 6777888899999999 99999988876443 22111 1111223455667
Q ss_pred eCCeEEEEeCCCCc
Q 002615 777 RNGSIYSFEQESGN 790 (900)
Q Consensus 777 ~dg~l~~~d~~tG~ 790 (900)
-+|.|-.+...++.
T Consensus 317 fdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 317 FDGKISIYSLQGTD 330 (1049)
T ss_pred eccceeeeeeecCC
Confidence 78888888876553
No 362
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.47 E-value=0.14 Score=56.64 Aligned_cols=173 Identities=10% Similarity=0.012 Sum_probs=102.1
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCE-EEEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCC
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQ-VVVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQ 642 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~-i~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 642 (900)
..|+..|.+..... .+...+ ...++.++++++. ++..+++ ..||.+|..+|+........+ ....+.+.+++.
T Consensus 169 ~~l~~~d~dg~~~~-~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g-~~~~~~~SPDG~ 245 (419)
T PRK04043 169 SNIVLADYTLTYQK-VIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQG-MLVVSDVSKDGS 245 (419)
T ss_pred ceEEEECCCCCcee-EEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCC-cEEeeEECCCCC
Confidence 35666665433222 222233 4557899999885 6665554 469999999998765444333 334466777766
Q ss_pred EEEEe-cC--CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-C--cEEEEEcCCCCceeeeEeecCCc
Q 002615 643 LIWCG-SH--DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-G--RLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 643 ~i~~g-s~--dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g--~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
.|++. +. +..||.+|..+|+...-.. .......|...+++..|++.+.. | .||.+|+++ |+..- ......
T Consensus 246 ~la~~~~~~g~~~Iy~~dl~~g~~~~LT~-~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~--g~~~r-lt~~g~ 321 (419)
T PRK04043 246 KLLLTMAPKGQPDIYLYDTNTKTLTQITN-YPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS--GSVEQ-VVFHGK 321 (419)
T ss_pred EEEEEEccCCCcEEEEEECCCCcEEEccc-CCCccCccEECCCCCEEEEEECCCCCceEEEEECCC--CCeEe-CccCCC
Confidence 65543 32 3579999998886543222 22244567777777788887643 2 688999876 54311 111111
Q ss_pred ceeeeeeeeCCCEEEEEeec---------CcEEEEC-CCCCE
Q 002615 717 AFASLCITSANRHVICCLVD---------GHVVALD-SSGSI 748 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~---------g~v~~~d-~~G~~ 748 (900)
. ...++++++.++..... ..|+.+| .+|+.
T Consensus 322 -~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~ 361 (419)
T PRK04043 322 -N-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI 361 (419)
T ss_pred -c-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe
Confidence 1 23566677766554432 3678888 66653
No 363
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.46 E-value=0.19 Score=53.03 Aligned_cols=227 Identities=10% Similarity=0.026 Sum_probs=103.9
Q ss_pred CceEEEEecCC--CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee
Q 002615 556 SDIYLFVGSHS--HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 556 ~~~~v~igs~~--g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
++..||.+..+ .+++.+|+.||+..--....+......++++++..+|--..+..|+.+|++|++..-.+..+...+.
T Consensus 47 G~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g 126 (386)
T PF14583_consen 47 GRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKG 126 (386)
T ss_dssp S-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEE
T ss_pred CCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCccccc
Confidence 34456655544 4799999999998755554433223567777767764433345899999999988777777666553
Q ss_pred eeeE-eCCCCEEEEec-----------------------CCCeEEEEECCCCeEEEeeccC---CccccCceeeccCCEE
Q 002615 634 QPVV-DAPRQLIWCGS-----------------------HDHNLYALDFRNYRCVYKLPCG---GSIFGSPAIDEVHDVL 686 (900)
Q Consensus 634 ~~~~-~~~~~~i~~gs-----------------------~dg~l~~~d~~~g~~~w~~~~~---~~~~~~~~~~~~~~~l 686 (900)
.... ...++..++|. -...|+.+|+++|+..-.+.-. +.+..+|.-. +.|
T Consensus 127 ~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp---~li 203 (386)
T PF14583_consen 127 YGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDP---TLI 203 (386)
T ss_dssp EEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEE---EEE
T ss_pred ccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCC---CEE
Confidence 2222 23334445441 1246888999998754333221 2333344321 333
Q ss_pred EEEeC------CCcEEEEEcCCCCceeeeEeecCCccee--eeeeeeCCCEEEEEee-----cCcEEEEC-CCCCEEeee
Q 002615 687 YVAST------SGRLTAISVKALPFHTLWLHELEVPAFA--SLCITSANRHVICCLV-----DGHVVALD-SSGSIIWRC 752 (900)
Q Consensus 687 ~v~t~------~g~l~~~~~~~~~g~~~w~~~~~~~~~~--s~~~~~~~~~i~~~~~-----~g~v~~~d-~~G~~~w~~ 752 (900)
.++-. +.++..++.+ |+..|......+... .--...++..++.-+. +..|+.+| .+++..|-.
T Consensus 204 ~fCHEGpw~~Vd~RiW~i~~d---g~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~ 280 (386)
T PF14583_consen 204 MFCHEGPWDLVDQRIWTINTD---GSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM 280 (386)
T ss_dssp EEEE-S-TTTSS-SEEEEETT---S---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEE
T ss_pred EEeccCCcceeceEEEEEEcC---CCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEE
Confidence 33321 3356666644 555565543332221 1223455655554332 23577788 777665433
Q ss_pred cCCCceeccccccccCCCeEEEEeeCC-----------------eEEEEeCCCCcee
Q 002615 753 RTGGPIFAGPCTSFALPSQVLICSRNG-----------------SIYSFEQESGNLL 792 (900)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~l~~g~~dg-----------------~l~~~d~~tG~~~ 792 (900)
..+. ++ -.....++.+++|...+ .||.++.+.+...
T Consensus 281 ~~p~---~~-H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~ 333 (386)
T PF14583_consen 281 EMPW---CS-HFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFR 333 (386)
T ss_dssp EE-S---EE-EEEE-TTSSEEEEEE-------------------EEEEEETTTTEEE
T ss_pred eCCc---ee-eeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCcee
Confidence 3221 11 11122467787774322 4666777766643
No 364
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=97.46 E-value=0.011 Score=60.45 Aligned_cols=185 Identities=11% Similarity=0.038 Sum_probs=104.9
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEE-------EEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEEEEec
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLW-------EIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w-------~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~ 627 (900)
.+..|..||.|..+..|..-.+-... .+..+.+-...+...+ ..+.+...+.|..+..||..||+.+-+...
T Consensus 93 nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~h 172 (472)
T KOG0303|consen 93 NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDH 172 (472)
T ss_pred CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCC
Confidence 46678888999999999854332211 1222222111122222 123456667789999999999999888774
Q ss_pred CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccc-cCceeeccCCEEEEEe----CCCcEEEEEcCC
Q 002615 628 CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIF-GSPAIDEVHDVLYVAS----TSGRLTAISVKA 702 (900)
Q Consensus 628 ~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~-~~~~~~~~~~~l~v~t----~~g~l~~~~~~~ 702 (900)
++.+ .+..+..++..+.+.+.|..|..||+.+|++++....+...- .-.++.. ++.++... .+..+-.||+++
T Consensus 173 pd~i-~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~-~g~i~tTGfsr~seRq~aLwdp~n 250 (472)
T KOG0303|consen 173 PDMV-YSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLA-SGKIFTTGFSRMSERQIALWDPNN 250 (472)
T ss_pred CCeE-EEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEec-cCceeeeccccccccceeccCccc
Confidence 4444 445566667788888999999999999999999874433222 2222222 23333322 234455666554
Q ss_pred CC-ceeeeEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC
Q 002615 703 LP-FHTLWLHELEVPAFASLCITSANRHVICCLV-DGHVVALD 743 (900)
Q Consensus 703 ~~-g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d 743 (900)
.+ .-.+...+.+.. ..-+-...+.+.+|.++. |+.|..|.
T Consensus 251 l~eP~~~~elDtSnG-vl~PFyD~dt~ivYl~GKGD~~IRYyE 292 (472)
T KOG0303|consen 251 LEEPIALQELDTSNG-VLLPFYDPDTSIVYLCGKGDSSIRYFE 292 (472)
T ss_pred ccCcceeEEeccCCc-eEEeeecCCCCEEEEEecCCcceEEEE
Confidence 11 001111221111 122233445667777664 56676666
No 365
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.45 E-value=0.095 Score=64.88 Aligned_cols=247 Identities=16% Similarity=0.181 Sum_probs=125.1
Q ss_pred eeEecCCCEEEEEe-eCCEEEEEECCCCcEEEEEecCCc--------------eeeeeeEeCCCCEEEEecC-CCeEEEE
Q 002615 593 AAVLADFSQVVVGC-YKGKIYFLDYLTGDIYWTFQTCGE--------------VKCQPVVDAPRQLIWCGSH-DHNLYAL 656 (900)
Q Consensus 593 ~~~~~~~~~i~vg~-~dg~l~~~d~~tG~~~w~~~~~~~--------------~~~~~~~~~~~~~i~~gs~-dg~l~~~ 656 (900)
..++..++.+||.. .++.|+.+|. +|...-.+...+. .....+++.+++.||++.. ++.|..+
T Consensus 573 vavd~~~g~lyVaDs~n~rI~v~d~-~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~i 651 (1057)
T PLN02919 573 LAIDLLNNRLFISDSNHNRIVVTDL-DGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREI 651 (1057)
T ss_pred EEEECCCCeEEEEECCCCeEEEEeC-CCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEE
Confidence 44554456677764 4667888885 4555433322110 1123345555677888654 4678889
Q ss_pred ECCCCeEEEeecc--------CC-----ccccC---ceeeccCCEEEEEe-CCCcEEEEEcCCCCceeeeEeecC-----
Q 002615 657 DFRNYRCVYKLPC--------GG-----SIFGS---PAIDEVHDVLYVAS-TSGRLTAISVKALPFHTLWLHELE----- 714 (900)
Q Consensus 657 d~~~g~~~w~~~~--------~~-----~~~~~---~~~~~~~~~l~v~t-~~g~l~~~~~~~~~g~~~w~~~~~----- 714 (900)
|..++...-.... ++ ..... .++++.++.+|++. .++.++.+|..+ |........+
T Consensus 652 d~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~--g~v~~~~G~G~~~~~ 729 (1057)
T PLN02919 652 DFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISD--GVTRVFSGDGYERNL 729 (1057)
T ss_pred ecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCC--CeEEEEecCCccccC
Confidence 9887754321110 00 01222 35555467888875 467888898776 4332110000
Q ss_pred -C-----cce---eeeeeeeCCCEEEEEe-ecCcEEEEC-CCCCEEeeecC-----------C---C----ceeccc-cc
Q 002615 715 -V-----PAF---ASLCITSANRHVICCL-VDGHVVALD-SSGSIIWRCRT-----------G---G----PIFAGP-CT 764 (900)
Q Consensus 715 -~-----~~~---~s~~~~~~~~~i~~~~-~~g~v~~~d-~~G~~~w~~~~-----------~---~----~~~~~~-~~ 764 (900)
. ..+ ....+..+++.+|++. .++.|..+| .+|...+.... + + ..+..| .+
T Consensus 730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv 809 (1057)
T PLN02919 730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV 809 (1057)
T ss_pred CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence 0 001 1234555667677765 457899999 66654332110 0 0 011122 22
Q ss_pred cccCCCeEEEEe-eCCeEEEEeCCCCceeeEEecCCceecc-ccccccccc-ccccccCCCeEEEEEcCCCcEEEEEeec
Q 002615 765 SFALPSQVLICS-RNGSIYSFEQESGNLLWEYSVGDPITAS-AYIDEHLQL-KLESCLSIDRLVCICTSSGSIHILRVNL 841 (900)
Q Consensus 765 ~~~~~~~l~~g~-~dg~l~~~d~~tG~~~w~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~g~~~G~v~~~d~~~ 841 (900)
..+.++.+|++. .++.|..||.+++.+......+...+.. ......+.. .+.....++..+++.+.++.|++||.++
T Consensus 810 avd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 810 LCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred eEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 334566788874 5778999999888766433222110000 000000000 0001112244444445678899999987
Q ss_pred C
Q 002615 842 D 842 (900)
Q Consensus 842 ~ 842 (900)
+
T Consensus 890 ~ 890 (1057)
T PLN02919 890 G 890 (1057)
T ss_pred C
Confidence 6
No 366
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=97.43 E-value=0.0003 Score=76.84 Aligned_cols=156 Identities=12% Similarity=0.053 Sum_probs=109.7
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
++-....|-.|+.+|.|..||+..++....+..+.....+..+.+-+.+...|+.|+.+..||.+..-....+..+..+.
T Consensus 78 f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv 157 (825)
T KOG0267|consen 78 FDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVV 157 (825)
T ss_pred cCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCccee
Confidence 33456678889999999999999998876655544334455677766556668889999999987444555666666666
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeE
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWL 710 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~ 710 (900)
-...+.+++..+..|+.|..+..||...|+..-.|+.+..-..++-..+.+-.+--|+.++.+..||+++ .+.+-+
T Consensus 158 ~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet--fe~I~s 233 (825)
T KOG0267|consen 158 DVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET--FEVISS 233 (825)
T ss_pred EEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccce--eEEeec
Confidence 6777888888888899999999999999999877774322222222333222344567788899999876 444433
No 367
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.39 E-value=0.025 Score=56.23 Aligned_cols=278 Identities=9% Similarity=0.084 Sum_probs=131.1
Q ss_pred eeceeEecCCCEEEEEeeCCEEEEEECCCCcEEE----EEecCCceeeeeeEeCCCCEEEEecC-CCeEEEEECC---CC
Q 002615 590 ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYW----TFQTCGEVKCQPVVDAPRQLIWCGSH-DHNLYALDFR---NY 661 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w----~~~~~~~~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~---~g 661 (900)
.+..+++.+|.++...|.|+.|..|+.++=...- +...+-.-.+..++.++-.-+++... ...|+.|-.. +|
T Consensus 89 vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG 168 (420)
T KOG2096|consen 89 VTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDG 168 (420)
T ss_pred eeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccC
Confidence 4577899999999999999999999977632210 11111112233345544343443333 3356665432 12
Q ss_pred eEEEee-ccC----CccccCc----eeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEE
Q 002615 662 RCVYKL-PCG----GSIFGSP----AIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVIC 732 (900)
Q Consensus 662 ~~~w~~-~~~----~~~~~~~----~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~ 732 (900)
..-..+ ..+ ......+ -+.+....|..++.+..+..|+++ |+.+-+.+.........++++++..+.+
T Consensus 169 ~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk---Gq~L~~idtnq~~n~~aavSP~GRFia~ 245 (420)
T KOG2096|consen 169 SGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK---GQLLQSIDTNQSSNYDAAVSPDGRFIAV 245 (420)
T ss_pred CCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC---CceeeeeccccccccceeeCCCCcEEEE
Confidence 211100 000 0001111 122222345556667778888876 6777666554433334455556666665
Q ss_pred EeecCcEEEEC----CCCCE-----EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCce--
Q 002615 733 CLVDGHVVALD----SSGSI-----IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPI-- 801 (900)
Q Consensus 733 ~~~~g~v~~~d----~~G~~-----~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~-- 801 (900)
+...--+.+|. ++|+. +++++.........+. .....++...+.||.+..||.+ +.++..-+..+
T Consensus 246 ~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF-sn~S~r~vtvSkDG~wriwdtd---VrY~~~qDpk~Lk 321 (420)
T KOG2096|consen 246 SGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF-SNSSTRAVTVSKDGKWRIWDTD---VRYEAGQDPKILK 321 (420)
T ss_pred ecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee-CCCcceeEEEecCCcEEEeecc---ceEecCCCchHhh
Confidence 55444454443 34432 1222211110111111 1124578888999999999964 22211111100
Q ss_pred -eccccccc---ccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeee-eccCCccccCcee-eC
Q 002615 802 -TASAYIDE---HLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAK-LELQGDIFSSPVM-IG 875 (900)
Q Consensus 802 -~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ss~~~-~~ 875 (900)
...|..+. -..| ...+++..++ .+....|.+|..++|. .... -+.++..+++... .+
T Consensus 322 ~g~~pl~aag~~p~RL---~lsP~g~~lA-~s~gs~l~~~~se~g~-------------~~~~~e~~h~~~Is~is~~~~ 384 (420)
T KOG2096|consen 322 EGSAPLHAAGSEPVRL---ELSPSGDSLA-VSFGSDLKVFASEDGK-------------DYPELEDIHSTTISSISYSSD 384 (420)
T ss_pred cCCcchhhcCCCceEE---EeCCCCcEEE-eecCCceEEEEcccCc-------------cchhHHHhhcCceeeEEecCC
Confidence 00011000 0000 0122344443 3444567778776651 1111 1234444555444 35
Q ss_pred CEEEEeeeCCeEEEEE
Q 002615 876 GRVFVGCRDDYIYCIA 891 (900)
Q Consensus 876 ~~l~vg~~dg~l~~ld 891 (900)
|+..+.|.|.++..+.
T Consensus 385 g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 385 GKYIATCGDRYVRVIR 400 (420)
T ss_pred CcEEeeecceeeeeec
Confidence 6777777788777765
No 368
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.39 E-value=0.13 Score=51.53 Aligned_cols=277 Identities=18% Similarity=0.238 Sum_probs=135.0
Q ss_pred eeEecCCCEEEEEeeCC-EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCC------CeEEEEECCCCeEEE
Q 002615 593 AAVLADFSQVVVGCYKG-KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHD------HNLYALDFRNYRCVY 665 (900)
Q Consensus 593 ~~~~~~~~~i~vg~~dg-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~d------g~l~~~d~~~g~~~w 665 (900)
+.+..|.+-..++..+| .||-.|+-.-...-++..++ ....-++...+-..++|+.+ ..|..||-...+++-
T Consensus 11 vs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G-~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~ 89 (346)
T KOG2111|consen 11 VSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGG-FKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCII 89 (346)
T ss_pred EEEccCCceEEEEecCceEEEecCchhhhhhhccccCc-hhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEE
Confidence 45555555566666655 34444431111111222222 22222222222333455433 468999866667776
Q ss_pred eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeC-CCEEEE--EeecCcEEEE
Q 002615 666 KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSA-NRHVIC--CLVDGHVVAL 742 (900)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~-~~~i~~--~~~~g~v~~~ 742 (900)
.+...+.+.+ ..+. .++|++... +.++.|...+. -+.+...+...+.-.-.+++.. +..+++ |..-|.|...
T Consensus 90 el~f~~~I~~-V~l~--r~riVvvl~-~~I~VytF~~n-~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~ 164 (346)
T KOG2111|consen 90 ELSFNSEIKA-VKLR--RDRIVVVLE-NKIYVYTFPDN-PKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIV 164 (346)
T ss_pred EEEeccceee-EEEc--CCeEEEEec-CeEEEEEcCCC-hhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEE
Confidence 6655555443 2233 366666654 56888876531 3334333332211111111111 111111 2233555555
Q ss_pred C-CCCCEE--eeecCCCceeccccccccCCCeE-EEEeeCCe-EEEEeCCCCceeeEEecCC---ceecccccccccccc
Q 002615 743 D-SSGSII--WRCRTGGPIFAGPCTSFALPSQV-LICSRNGS-IYSFEQESGNLLWEYSVGD---PITASAYIDEHLQLK 814 (900)
Q Consensus 743 d-~~G~~~--w~~~~~~~~~~~~~~~~~~~~~l-~~g~~dg~-l~~~d~~tG~~~w~~~~~~---~~~~~~~~~~~~~~~ 814 (900)
| ..-+.- -.+.... ....|+....+|.+ ..++..|+ |+.||..+|+++-++.-+. .++...+..+
T Consensus 165 dL~~~~~~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~----- 237 (346)
T KOG2111|consen 165 DLASTKPNAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPN----- 237 (346)
T ss_pred EhhhcCcCCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCC-----
Confidence 5 211110 0011100 11123333345554 44566776 5789999999998876554 3455444433
Q ss_pred cccccCCCeEEEEEcCCCcEEEEEeecCccccc---------ccccccc--eeeeeeeccCCccccCcee----eC-CEE
Q 002615 815 LESCLSIDRLVCICTSSGSIHILRVNLDVTGKE---------NQSKDHM--VQEFAKLELQGDIFSSPVM----IG-GRV 878 (900)
Q Consensus 815 ~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~---------~~~~~~~--~~~~~~~~l~~~~~ss~~~----~~-~~l 878 (900)
..++++.++.|+|++|..+....... .+..+.. .+.++++.++.. ++.+ .+ +.+
T Consensus 238 -------~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~---~~~~~~fg~~~nsv 307 (346)
T KOG2111|consen 238 -------SSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQG---TQCIIAFGSETNTV 307 (346)
T ss_pred -------ccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCC---CcEEEEecCCCCeE
Confidence 78999999999999998876432222 0111111 233344555532 2222 23 678
Q ss_pred EEeeeCCeEEEEEc
Q 002615 879 FVGCRDDYIYCIAL 892 (900)
Q Consensus 879 ~vg~~dg~l~~ld~ 892 (900)
.+-|.||..|.+..
T Consensus 308 i~i~~Dgsy~k~~f 321 (346)
T KOG2111|consen 308 IAICADGSYYKFKF 321 (346)
T ss_pred EEEEeCCcEEEEEe
Confidence 88888988886643
No 369
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=97.38 E-value=0.029 Score=52.73 Aligned_cols=190 Identities=16% Similarity=0.204 Sum_probs=120.2
Q ss_pred ceEEEEecCCCeEEE--EECCCCcEE---EEEecCCceeeceeEecC---CCEEEE--EeeCCEEEEEECCCCcEEEEEe
Q 002615 557 DIYLFVGSHSHKFIC--ADAKRSSVL---WEIKLEGRIECSAAVLAD---FSQVVV--GCYKGKIYFLDYLTGDIYWTFQ 626 (900)
Q Consensus 557 ~~~v~igs~~g~l~~--~d~~tG~~~---w~~~~~~~~~~~~~~~~~---~~~i~v--g~~dg~l~~~d~~tG~~~w~~~ 626 (900)
+..+..||.|..|.. ||.+|.+.. -++..++....-.++.++ ++.|.+ |..|-.||.-|-.+|+....+.
T Consensus 101 geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s 180 (350)
T KOG0641|consen 101 GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS 180 (350)
T ss_pred cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec
Confidence 556667777776554 444443221 134444432223344322 334444 3345678888888887766554
Q ss_pred cCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc----CC---ccccCceeeccCCEEEEEeCCCcEEEEE
Q 002615 627 TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC----GG---SIFGSPAIDEVHDVLYVASTSGRLTAIS 699 (900)
Q Consensus 627 ~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~----~~---~~~~~~~~~~~~~~l~v~t~~g~l~~~~ 699 (900)
.+..-.-. .+.-++-.+..|+.|.++..||+.-..++..... +| .-..+.++++.+..+..|-.+.....||
T Consensus 181 ghtghila-lyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd 259 (350)
T KOG0641|consen 181 GHTGHILA-LYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD 259 (350)
T ss_pred CCcccEEE-EEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence 43322221 2222345567789999999999987767665433 22 3345567777666667777888899999
Q ss_pred cCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEE
Q 002615 700 VKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSII 749 (900)
Q Consensus 700 ~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~ 749 (900)
+.. |..+.++..+...+.+..+.+.-.++..+++|..|..-|-.|.+.
T Consensus 260 irg--~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla 307 (350)
T KOG0641|consen 260 IRG--GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA 307 (350)
T ss_pred eeC--CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchh
Confidence 997 888888877766666777777777899999998888877556553
No 370
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.37 E-value=0.0011 Score=56.02 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=51.9
Q ss_pred ceeeChHHHHHHHhCCCCeeEEEEEEeecCCceEEEEEEEEecCCCCc----hHHHHHHHHHHHHhhCCCCccCCEEEEc
Q 002615 248 GQRMALEEIEHTLRGHPDVVDTAVVSHKHQGELVILVAFIVLKEKKTS----SEIFLSSIKSWVSSKLPLAMIPNRFVFM 323 (900)
Q Consensus 248 G~rv~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~l~~~v~~~~~~~~----~~~~~~~l~~~l~~~l~~~~~P~~~~~v 323 (900)
|.+|+|..||++|.++|++.....+.....+....+...++..+.... .+.+.++|++.+++.+.-- .--.++..
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~-~~V~lv~~ 79 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVR-PEVELVPP 79 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS--EEEEEE-T
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCce-EEEEEECC
Confidence 789999999999999999994433333333455667777888775432 2445567777777776532 12233444
Q ss_pred CCcCCCCCCCcch
Q 002615 324 DSLPMTSSGKVDY 336 (900)
Q Consensus 324 ~~lP~t~~GKidr 336 (900)
.+||++ .||..|
T Consensus 80 gtLpr~-~~K~~R 91 (96)
T PF14535_consen 80 GTLPRS-EGKAKR 91 (96)
T ss_dssp T-S----SSSS-S
T ss_pred CCccCC-CCcceE
Confidence 569997 578665
No 371
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.35 E-value=0.04 Score=56.15 Aligned_cols=170 Identities=18% Similarity=0.156 Sum_probs=117.4
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecC-CceeeeeeEeCCCC--EE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC-GEVKCQPVVDAPRQ--LI 644 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~--~i 644 (900)
.+..++.+.+..+-++..+..+. .+--+.++++|.= ...||.+|..+-+++.++..- .......++..... ++
T Consensus 69 ~Lkv~~~Kk~~~ICe~~fpt~IL---~VrmNr~RLvV~L-ee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~yl 144 (391)
T KOG2110|consen 69 KLKVVHFKKKTTICEIFFPTSIL---AVRMNRKRLVVCL-EESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYL 144 (391)
T ss_pred eEEEEEcccCceEEEEecCCceE---EEEEccceEEEEE-cccEEEEecccceeehhhhccCCCccceEeeccCCCCceE
Confidence 47777877777776666665542 3333445666654 455999999999998876653 22232333333332 33
Q ss_pred E-Eec-CCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEE-EEcCCCCceeeeEeecCCcc--ee
Q 002615 645 W-CGS-HDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTA-ISVKALPFHTLWLHELEVPA--FA 719 (900)
Q Consensus 645 ~-~gs-~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~-~~~~~~~g~~~w~~~~~~~~--~~ 719 (900)
. -++ ..|.|+.||..+-+.+-.+..+....+..++..++..|..++..|++.+ +...+ |+.+.++..+... +.
T Consensus 145 Ayp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~--G~kl~eFRRG~~~~~Iy 222 (391)
T KOG2110|consen 145 AYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE--GQKLYEFRRGTYPVSIY 222 (391)
T ss_pred EecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCC--ccEeeeeeCCceeeEEE
Confidence 2 233 3588999999998888888888888888889887888888999997765 56665 8888887665432 34
Q ss_pred eeeeeeCCCEEEEEeecCcEEEEC
Q 002615 720 SLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 720 s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+.++..+...+.+.+..++|++|.
T Consensus 223 SL~Fs~ds~~L~~sS~TeTVHiFK 246 (391)
T KOG2110|consen 223 SLSFSPDSQFLAASSNTETVHIFK 246 (391)
T ss_pred EEEECCCCCeEEEecCCCeEEEEE
Confidence 666777777777777778888876
No 372
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.33 E-value=0.0058 Score=67.75 Aligned_cols=187 Identities=12% Similarity=0.071 Sum_probs=103.6
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCc--e-eeceeE---ecCCCEEEEEeeCCEEEEEECCC---CcEEEE
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR--I-ECSAAV---LADFSQVVVGCYKGKIYFLDYLT---GDIYWT 624 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~--~-~~~~~~---~~~~~~i~vg~~dg~l~~~d~~t---G~~~w~ 624 (900)
.+..+.+.+|-.--.||+++...-.+.-....+.+ . ++..-+ ..+.+.|++.+.+|.|.+||+.. .+++..
T Consensus 49 r~~~qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~ 128 (839)
T KOG0269|consen 49 RDINQIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTV 128 (839)
T ss_pred CCcceeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCccccchhhhH
Confidence 34445555554444577777664433222221211 1 111111 12334688888899999999765 333333
Q ss_pred EecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeecc-CCEEEEEeCCCcEEEEEcCC
Q 002615 625 FQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEV-HDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 625 ~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~-~~~l~v~t~~g~l~~~~~~~ 702 (900)
|.-+........+.. ...+|+.|+.||.+.+||++..+-.-.+.......-...+.+. ++....+..+|.|..||++.
T Consensus 129 f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 129 FNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred hhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 333333222222222 3477889999999999999876554444332211111112221 34555566788999999874
Q ss_pred CCceeeeEe--ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 703 LPFHTLWLH--ELEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 703 ~~g~~~w~~--~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
-..|.. ..+..........++...+..|+.|+.+.+||
T Consensus 209 ---p~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 209 ---PDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred ---chhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence 223332 23333334555666667777888899999998
No 373
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.30 E-value=0.091 Score=58.04 Aligned_cols=181 Identities=10% Similarity=-0.012 Sum_probs=104.5
Q ss_pred EEEecC---CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee---CCEEEEEECCCCcEEEEEecCCceee
Q 002615 560 LFVGSH---SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY---KGKIYFLDYLTGDIYWTFQTCGEVKC 633 (900)
Q Consensus 560 v~igs~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~---dg~l~~~d~~tG~~~w~~~~~~~~~~ 633 (900)
++..+. ...||.+|..+|+..--....+. ...+.+++|+..+++... +..||.+|..+|+..- .........
T Consensus 203 i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~-~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~~d~ 280 (419)
T PRK04043 203 FYYTSYGERKPTLYKYNLYTGKKEKIASSQGM-LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPGIDV 280 (419)
T ss_pred EEEEEccCCCCEEEEEECCCCcEEEEecCCCc-EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEE-cccCCCccC
Confidence 555443 34799999999987544433332 335678999887766532 3579999988886532 222222345
Q ss_pred eeeEeCCCCEEEEecCC---CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC---------CcEEEEEcC
Q 002615 634 QPVVDAPRQLIWCGSHD---HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS---------GRLTAISVK 701 (900)
Q Consensus 634 ~~~~~~~~~~i~~gs~d---g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~---------g~l~~~~~~ 701 (900)
.+.+.+++..|+..+.. ..||.+|..+|+....... +.. .+..+++++.|.+.+.. ..++.+|++
T Consensus 281 ~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~ 357 (419)
T PRK04043 281 NGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN 357 (419)
T ss_pred ccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC
Confidence 67788887777776532 2699999998876433222 221 23566656666554432 368888877
Q ss_pred CCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecC---cEEEECCCCCEE
Q 002615 702 ALPFHTLWLHELEVPAFASLCITSANRHVICCLVDG---HVVALDSSGSII 749 (900)
Q Consensus 702 ~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g---~v~~~d~~G~~~ 749 (900)
+ |.. ...... .....+.+.+++..++..+..+ .++.++.+|...
T Consensus 358 ~--g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~ 404 (419)
T PRK04043 358 S--DYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKS 404 (419)
T ss_pred C--CCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCee
Confidence 6 432 122222 1223456666666665554322 244444444433
No 374
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.30 E-value=0.054 Score=53.96 Aligned_cols=271 Identities=13% Similarity=0.111 Sum_probs=145.8
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEE----EEecCCceeeceeEecCCCEEEEEeeCC-EEEEEEC--C-CCcE---
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLW----EIKLEGRIECSAAVLADFSQVVVGCYKG-KIYFLDY--L-TGDI--- 621 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w----~~~~~~~~~~~~~~~~~~~~i~vg~~dg-~l~~~d~--~-tG~~--- 621 (900)
+..++.++...+.|+.|..||.++=...- +..++-...+.+.+.+|-.-+++.+..| .||+|.. + +|..
T Consensus 94 FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~ 173 (420)
T KOG2096|consen 94 FSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHH 173 (420)
T ss_pred EcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcc
Confidence 44456777888889999999987622110 0111111223456777766677766554 4665542 2 2332
Q ss_pred --EEE---Eec-CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcE
Q 002615 622 --YWT---FQT-CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRL 695 (900)
Q Consensus 622 --~w~---~~~-~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l 695 (900)
.|. |.- +.......-+.+...+|..++.|..|..|+.+ |+.+..++.........++++++..|.++...-.+
T Consensus 174 ~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDV 252 (420)
T KOG2096|consen 174 FVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDV 252 (420)
T ss_pred cccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCc
Confidence 121 110 01111112233345566778888899999988 88887777655444555666655556665555556
Q ss_pred EEEEcC-CCCce-----eeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeec-------CC-Cc---e
Q 002615 696 TAISVK-ALPFH-----TLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCR-------TG-GP---I 758 (900)
Q Consensus 696 ~~~~~~-~~~g~-----~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~-------~~-~~---~ 758 (900)
..|.+- +..|+ ...+.+.+.......++..+..+++..+.||....||.+ +.+... .+ .+ .
T Consensus 253 kVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd--VrY~~~qDpk~Lk~g~~pl~aa 330 (420)
T KOG2096|consen 253 KVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD--VRYEAGQDPKILKEGSAPLHAA 330 (420)
T ss_pred eEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc--ceEecCCCchHhhcCCcchhhc
Confidence 666531 11132 222333333334556677777889999999999988732 112111 11 00 0
Q ss_pred ecccc-ccccCCCeEEEEeeCCeEEEEeCCCCceeeEEe-cCCceecccccccccccccccccCCCeEEEEEcCCCcEEE
Q 002615 759 FAGPC-TSFALPSQVLICSRNGSIYSFEQESGNLLWEYS-VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHI 836 (900)
Q Consensus 759 ~~~~~-~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~ 836 (900)
-+.|+ .....++.++..+....|..|..++|+..-.++ .++.-++....+. .+.+++.++ |..+.+
T Consensus 331 g~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~-----------~g~~~atcG-dr~vrv 398 (420)
T KOG2096|consen 331 GSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSS-----------DGKYIATCG-DRYVRV 398 (420)
T ss_pred CCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecC-----------CCcEEeeec-ceeeee
Confidence 11221 112235677777777788888888887653322 2222223222222 255555554 556777
Q ss_pred EE
Q 002615 837 LR 838 (900)
Q Consensus 837 ~d 838 (900)
+.
T Consensus 399 ~~ 400 (420)
T KOG2096|consen 399 IR 400 (420)
T ss_pred ec
Confidence 64
No 375
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.27 Score=50.36 Aligned_cols=237 Identities=13% Similarity=0.141 Sum_probs=127.7
Q ss_pred eeCCceEEEEecCC---CeE--EEEECCCCcEEE--EEecCCceeeceeEecCCCEEEEEeeCC-EEEEEECC-CCcEEE
Q 002615 553 LKDSDIYLFVGSHS---HKF--ICADAKRSSVLW--EIKLEGRIECSAAVLADFSQVVVGCYKG-KIYFLDYL-TGDIYW 623 (900)
Q Consensus 553 ~~~~~~~v~igs~~---g~l--~~~d~~tG~~~w--~~~~~~~~~~~~~~~~~~~~i~vg~~dg-~l~~~d~~-tG~~~w 623 (900)
...+...||++..+ |.+ |.||.++|++.. +....+...+...++.++.+++++.|.+ .|.++-.+ +|.+.-
T Consensus 47 ~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~ 126 (346)
T COG2706 47 VNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQP 126 (346)
T ss_pred ECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCcccc
Confidence 45556688987654 444 556666687643 2333333335667888888999998864 45555443 365432
Q ss_pred EEe---cCCc---------eeeeeeEeCCCCEEEEecC-CCeEEEEECCCCeEEEeecc---CCccccCceeeccCCEEE
Q 002615 624 TFQ---TCGE---------VKCQPVVDAPRQLIWCGSH-DHNLYALDFRNYRCVYKLPC---GGSIFGSPAIDEVHDVLY 687 (900)
Q Consensus 624 ~~~---~~~~---------~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~~g~~~w~~~~---~~~~~~~~~~~~~~~~l~ 687 (900)
..+ ..+. -.-...++++++.|++.+- ...++.|+.+.|+..-.... .|.--...++.+++...|
T Consensus 127 ~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY 206 (346)
T COG2706 127 VVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAY 206 (346)
T ss_pred ceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEE
Confidence 211 1111 0123345666667766532 23588888888765432211 222233456667677777
Q ss_pred EEe-CCCcEEEEEcCCCCce--eeeEeecC------CcceeeeeeeeCCCEEEEEeec-CcEEE--EC-CCCCEEe--ee
Q 002615 688 VAS-TSGRLTAISVKALPFH--TLWLHELE------VPAFASLCITSANRHVICCLVD-GHVVA--LD-SSGSIIW--RC 752 (900)
Q Consensus 688 v~t-~~g~l~~~~~~~~~g~--~~w~~~~~------~~~~~s~~~~~~~~~i~~~~~~-g~v~~--~d-~~G~~~w--~~ 752 (900)
+-+ .++.|.+|..++..|+ .+.....- ....+..++..++..+|++... ..|.+ +| .+|++.. ..
T Consensus 207 ~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~ 286 (346)
T COG2706 207 LVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGIT 286 (346)
T ss_pred EEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEe
Confidence 766 4778888777653343 22222221 1223566777778888887532 23444 45 4454432 12
Q ss_pred cCCCceecccc-cc-ccCCCeEEEEeeCC---eEEEEeCCCCcee
Q 002615 753 RTGGPIFAGPC-TS-FALPSQVLICSRNG---SIYSFEQESGNLL 792 (900)
Q Consensus 753 ~~~~~~~~~~~-~~-~~~~~~l~~g~~dg---~l~~~d~~tG~~~ 792 (900)
.+.+. .|- .. ...++.|++...++ .+|..|.+||++.
T Consensus 287 ~teg~---~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~ 328 (346)
T COG2706 287 PTEGQ---FPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLT 328 (346)
T ss_pred ccCCc---CCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEE
Confidence 22221 111 11 22244566655443 5788899999875
No 376
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.24 E-value=0.041 Score=54.85 Aligned_cols=171 Identities=12% Similarity=0.083 Sum_probs=102.2
Q ss_pred EEEEEecCCceeeeeeEeCCCCEEEEecCC---CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC-CCcEE
Q 002615 621 IYWTFQTCGEVKCQPVVDAPRQLIWCGSHD---HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST-SGRLT 696 (900)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~i~~gs~d---g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~-~g~l~ 696 (900)
++-+++........-.....++.+|-++.- ..|..+|+++|+...+..++...++--+..- ++.||.-|+ ++..+
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f 113 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGF 113 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEE
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEE
Confidence 344454444444444433234678776532 2599999999999999988877766433222 488999997 67788
Q ss_pred EEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecC--CC-ceeccccccccCCCeE
Q 002615 697 AISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRT--GG-PIFAGPCTSFALPSQV 772 (900)
Q Consensus 697 ~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~--~~-~~~~~~~~~~~~~~~l 772 (900)
.||.++ .+.+-++..... .-.++.+++.++....+..++.+| .+-+..-+++. .+ ++-... -....+|.|
T Consensus 114 ~yd~~t--l~~~~~~~y~~E---GWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LN-ELE~i~G~I 187 (264)
T PF05096_consen 114 VYDPNT--LKKIGTFPYPGE---GWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLN-ELEYINGKI 187 (264)
T ss_dssp EEETTT--TEEEEEEE-SSS-----EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EE-EEEEETTEE
T ss_pred EEcccc--ceEEEEEecCCc---ceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcE-eEEEEcCEE
Confidence 999887 777766655542 234556788888887788999999 77666544432 21 111111 012236788
Q ss_pred EEE-eeCCeEEEEeCCCCceeeEEecC
Q 002615 773 LIC-SRNGSIYSFEQESGNLLWEYSVG 798 (900)
Q Consensus 773 ~~g-~~dg~l~~~d~~tG~~~w~~~~~ 798 (900)
|+- .....|..+|++||++.-.+++.
T Consensus 188 yANVW~td~I~~Idp~tG~V~~~iDls 214 (264)
T PF05096_consen 188 YANVWQTDRIVRIDPETGKVVGWIDLS 214 (264)
T ss_dssp EEEETTSSEEEEEETTT-BEEEEEE-H
T ss_pred EEEeCCCCeEEEEeCCCCeEEEEEEhh
Confidence 876 34667999999999998766543
No 377
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.23 E-value=0.096 Score=55.25 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=47.5
Q ss_pred EECCCCcEEEEEecCCc-----eeeceeEecCCCEEEEEee-C--CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 572 ADAKRSSVLWEIKLEGR-----IECSAAVLADFSQVVVGCY-K--GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 572 ~d~~tG~~~w~~~~~~~-----~~~~~~~~~~~~~i~vg~~-d--g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
.|+.||..+-++.-... .....++..+|.+++.++. + ..+|.+|+++|++..-....+......++.+++..
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~ 94 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRA 94 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSE
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCe
Confidence 57778776544432221 2235677888876665544 3 47999999999887544433222223344455566
Q ss_pred EEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 644 IWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 644 i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
+|.-..+..|+.+|+++++..-.+...
T Consensus 95 ~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 95 LYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp EEEEETTTEEEEEETTT--EEEEEE--
T ss_pred EEEEECCCeEEEEECCcCcEEEEEECC
Confidence 544444568999999998765444443
No 378
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=97.19 E-value=0.0074 Score=58.32 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=79.1
Q ss_pred EEEecCCCeEEEEECCCCeEEEeeccCC------ccccCceeec----cCCEEEEEeCCCcEEEEEcCCCCceeee--Ee
Q 002615 644 IWCGSHDHNLYALDFRNYRCVYKLPCGG------SIFGSPAIDE----VHDVLYVASTSGRLTAISVKALPFHTLW--LH 711 (900)
Q Consensus 644 i~~gs~dg~l~~~d~~~g~~~w~~~~~~------~~~~~~~~~~----~~~~l~v~t~~g~l~~~~~~~~~g~~~w--~~ 711 (900)
+.+|-.+|++..||..++..+-.+.... .....|+.+- .-++=..|+.+..+..|+++..+|...- ..
T Consensus 168 llaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~ 247 (323)
T KOG0322|consen 168 LLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEI 247 (323)
T ss_pred EEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceE
Confidence 4556678999999999985543332211 1112222211 0011122333445666766654454332 33
Q ss_pred ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCC-CeEEEEeeCCeEEEEe
Q 002615 712 ELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALP-SQVLICSRNGSIYSFE 785 (900)
Q Consensus 712 ~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~l~~~d 785 (900)
....+......+-++++.+..+++|+++.+|+ +++..+.-.+.... ...++.+..+ +.+..++.|+.|..|+
T Consensus 248 ~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsa--gvn~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 248 TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSA--GVNAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhc--ceeEEEeCCCCchhhhccCCceEEeee
Confidence 44556666777778888889999999999999 88887644332211 1111112222 4566677788777765
No 379
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=97.19 E-value=0.012 Score=62.50 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=87.2
Q ss_pred CEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeec-cCCccccCce
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLP-CGGSIFGSPA 678 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~-~~~~~~~~~~ 678 (900)
+.+.+.+.||.+..++ ++|++......+.....+.-+.+++.-+++.+.||.+..|. ++|-..-... .+.++. +..
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~-c~~ 152 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIR-CAR 152 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeE-EEE
Confidence 3577788899999998 78888777666655555566666666788888899999998 4443221111 111221 122
Q ss_pred eeccC-CEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeec
Q 002615 679 IDEVH-DVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCR 753 (900)
Q Consensus 679 ~~~~~-~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~ 753 (900)
..++. ..+|+. .+.++.=.+.....-+.|+- +.....+......++.+..|+.|-..-+||..|..++.-.
T Consensus 153 W~p~S~~vl~c~--g~h~~IKpL~~n~k~i~WkA--HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~ 224 (737)
T KOG1524|consen 153 WAPNSNSIVFCQ--GGHISIKPLAANSKIIRWRA--HDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSA 224 (737)
T ss_pred ECCCCCceEEec--CCeEEEeecccccceeEEec--cCcEEEEeecCccccceeecCCceeEEeecccCcccccCC
Confidence 22222 334432 23444433333223455553 3333444445556778888888888888997788876544
No 380
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=97.19 E-value=0.02 Score=58.23 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=71.8
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCce---eeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcc
Q 002615 768 LPSQVLICSRNGSIYSFEQESGNL---LWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVT 844 (900)
Q Consensus 768 ~~~~l~~g~~dg~l~~~d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~ 844 (900)
.++.+..++-||.|..||..++.. +.....++.+....+.. ...+++.|+++|.+.+||.+.-..
T Consensus 269 E~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr------------~~~lLasG~DdGt~~iwDLR~~~~ 336 (440)
T KOG0302|consen 269 EDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNR------------REPLLASGGDDGTLSIWDLRQFKS 336 (440)
T ss_pred cCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccC------------CcceeeecCCCceEEEEEhhhccC
Confidence 345677778899999999998843 22322233332221111 145899999999999999985433
Q ss_pred cccccccccceeeeeeeccCCccccCceee---CCEEEEeeeCCeEEEEEcccc
Q 002615 845 GKENQSKDHMVQEFAKLELQGDIFSSPVMI---GGRVFVGCRDDYIYCIALETQ 895 (900)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~---~~~l~vg~~dg~l~~ld~~tg 895 (900)
+ +.+..++.+...+++.-.. +..+-+++.|+.+-.||+...
T Consensus 337 ~----------~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 337 G----------QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred C----------CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 2 4456666666666665554 577888899999999998643
No 381
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=97.17 E-value=0.011 Score=59.10 Aligned_cols=227 Identities=12% Similarity=0.120 Sum_probs=127.5
Q ss_pred EEEEecCCCeEEEEECCCCeEEEeeccCCccccCcee-eccCCEEEEEeCCCcEEEEEcCCCCceeeeEe---ecCCcce
Q 002615 643 LIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAI-DEVHDVLYVASTSGRLTAISVKALPFHTLWLH---ELEVPAF 718 (900)
Q Consensus 643 ~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~-~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~---~~~~~~~ 718 (900)
.+.+|+.-|.|+.+|+.++++.-.+..+|.-++..-. ....+.|+.++.|..+..||+++ ...+--+ ..+....
T Consensus 107 ~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~--~~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 107 FLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT--DVCVAVFGGVEGHRDEV 184 (385)
T ss_pred eEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC--CeEEEEecccccccCcE
Confidence 3555667889999999999887766655543333322 22346788999999999999998 6655443 2333444
Q ss_pred eeeeeeeCCCEEEEEeecCcEEEEC-CCCCE------EeeecC------------CCceeccc--------cccccCCCe
Q 002615 719 ASLCITSANRHVICCLVDGHVVALD-SSGSI------IWRCRT------------GGPIFAGP--------CTSFALPSQ 771 (900)
Q Consensus 719 ~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~------~w~~~~------------~~~~~~~~--------~~~~~~~~~ 771 (900)
.+..+..+++++..++.|-.+..|+ ...+. ...+.. .-|.|++. |+... ++.
T Consensus 185 LSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~-gd~ 263 (385)
T KOG1034|consen 185 LSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF-GDF 263 (385)
T ss_pred EEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH-hhh
Confidence 5667777888999999999998887 42211 111111 11122111 11111 234
Q ss_pred EEEEeeCCeEEEEeCCCCcee--eE--------------EecCC-ceecccccccccccccccccCCCeEEEEEcCCCcE
Q 002615 772 VLICSRNGSIYSFEQESGNLL--WE--------------YSVGD-PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSI 834 (900)
Q Consensus 772 l~~g~~dg~l~~~d~~tG~~~--w~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v 834 (900)
++.=+-++.|.||-+ |++. |. ++.+. .+...-+. .-+-...+++|...|.+
T Consensus 264 ilSkscenaI~~w~p--gkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~----------~d~~~~~la~gnq~g~v 331 (385)
T KOG1034|consen 264 ILSKSCENAIVCWKP--GKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFA----------FDPWQKMLALGNQSGKV 331 (385)
T ss_pred eeecccCceEEEEec--chhhhhhhccCCCccceeeeeEeccCccceEEEEEe----------ecHHHHHHhhccCCCcE
Confidence 444455678888876 2221 11 11111 00000000 01115678889999999
Q ss_pred EEEEeecCcccccccccccceeeeeeeccCCcccc--CceeeCCEEEEeeeCCeEEEEEcc
Q 002615 835 HILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFS--SPVMIGGRVFVGCRDDYIYCIALE 893 (900)
Q Consensus 835 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~s--s~~~~~~~l~vg~~dg~l~~ld~~ 893 (900)
++||.++...... +++. . ...+..+. +...++..|...|.|+.+..||..
T Consensus 332 ~vwdL~~~ep~~~-------ttl~-~-s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 332 YVWDLDNNEPPKC-------TTLT-H-SKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred EEEECCCCCCccC-------ceEE-e-ccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9999986532111 0111 0 11111121 122245677788999999999864
No 382
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=97.17 E-value=0.021 Score=60.74 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=102.9
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPV 636 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~ 636 (900)
.+.+.+.|.||.+..++. +|++......+.....+.-..++|.-++....||.+..|. ++|-+.-+..-.+....+..
T Consensus 75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~ 152 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCAR 152 (737)
T ss_pred cceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEE
Confidence 456777788998888874 4777666665554444556677877788888999999998 78866543322333344445
Q ss_pred EeCCCC-EEEEecCCCeEEE--EECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 637 VDAPRQ-LIWCGSHDHNLYA--LDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 637 ~~~~~~-~i~~gs~dg~l~~--~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
+.++.+ .+|+.. ++++. +.+...-+.|+.+ ..+.-+.-.....+.+..|..|-+...||.. |..+.....
T Consensus 153 W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~WkAH--DGiiL~~~W~~~s~lI~sgGED~kfKvWD~~---G~~Lf~S~~ 225 (737)
T KOG1524|consen 153 WAPNSNSIVFCQG--GHISIKPLAANSKIIRWRAH--DGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ---GANLFTSAA 225 (737)
T ss_pred ECCCCCceEEecC--CeEEEeecccccceeEEecc--CcEEEEeecCccccceeecCCceeEEeeccc---CcccccCCh
Confidence 665544 455543 34443 3444455667653 2222222223334667777888888888865 777776666
Q ss_pred CCcceeeeeeeeCCCEEEEEee
Q 002615 714 EVPAFASLCITSANRHVICCLV 735 (900)
Q Consensus 714 ~~~~~~s~~~~~~~~~i~~~~~ 735 (900)
+...+.+.+..++ ....++++
T Consensus 226 ~ey~ITSva~npd-~~~~v~S~ 246 (737)
T KOG1524|consen 226 EEYAITSVAFNPE-KDYLLWSY 246 (737)
T ss_pred hccceeeeeeccc-cceeeeee
Confidence 5555556666555 33444444
No 383
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.16 E-value=0.0063 Score=65.15 Aligned_cols=156 Identities=17% Similarity=0.236 Sum_probs=90.6
Q ss_pred hcHHHHHHHH----HHcCeeEEEecHHHHHHHHHHHhhccCCCCCC-CcCEEEEec------cCCC-hhhHHHHHhhCC-
Q 002615 48 KNLISIIHFL----QAYSISRLTTVPSLMRVVLPALQSQHNMHVPS-SLKLLVLSG------EVLP-LSMWDIISKLFP- 114 (900)
Q Consensus 48 ~~~~~~~~~l----~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~-~lr~v~~gG------e~l~-~~~~~~~~~~~~- 114 (900)
.+...++..+ .+.++..++++|.++-.++..+++......++ ..+++-.|| |.++ .++.+.+.+.|.
T Consensus 175 ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv 254 (365)
T PF04443_consen 175 LDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGV 254 (365)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCC
Confidence 4566666655 34567889999998877776666554433333 445555554 5675 566677777772
Q ss_pred --CceEEeecCccccccccceecccCCccccccCCCCcceeeeccCCcEEEEecCCC----CCCCccEEEEccccccccc
Q 002615 115 --NISILNLYGSTEVSGDCTYFDCKRLPSILEMSTLKSVPIGLPISNCDIVLVESDT----VKPDEGEIYAGGLCLSNGY 188 (900)
Q Consensus 115 --~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~----~~~~~GEl~v~g~~~~~gY 188 (900)
..++++.||+||...... .+... -.+.|.. +.+.|+++ +.|+.|-|-+-.+... .
T Consensus 255 ~~~~~i~~~ygmtEl~s~~~--~~~~~--------------~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~-s- 315 (365)
T PF04443_consen 255 IPIENIYDMYGMTELNSQAY--ECGHG--------------HFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT-S- 315 (365)
T ss_pred CCHHHeeeeeeccccchhhe--eCCCC--------------cccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-C-
Confidence 248999999999764322 22111 0122223 66777765 2334455544332100 0
Q ss_pred cCCCCCCccchhccCCcccccCcCCCCCcceEecCceEEEccC--------CcEEEEcccCCcEEECcee
Q 002615 189 FSESTFMPSEYVKLHNNSICNCSVSCGSQTYFRTGDFARRIQS--------GDLVFLGRKDRTIKINGQR 250 (900)
Q Consensus 189 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~TGDl~~~~~~--------G~l~~~GR~dd~ik~~G~r 250 (900)
.-+..-|.|+|.+..+ .++.++||.+.- .++|-.
T Consensus 316 ---------------------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs 357 (365)
T PF04443_consen 316 ---------------------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCS 357 (365)
T ss_pred ---------------------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcH
Confidence 1123679999987654 279999998743 334433
No 384
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.15 E-value=0.11 Score=51.84 Aligned_cols=151 Identities=17% Similarity=0.171 Sum_probs=94.9
Q ss_pred CceEEEEecC---CCeEEEEECCCCcEEEEEecCCceee-ceeEecCCCEEEEEee-CCEEEEEECCCCcEEEEEecCCc
Q 002615 556 SDIYLFVGSH---SHKFICADAKRSSVLWEIKLEGRIEC-SAAVLADFSQVVVGCY-KGKIYFLDYLTGDIYWTFQTCGE 630 (900)
Q Consensus 556 ~~~~v~igs~---~g~l~~~d~~tG~~~w~~~~~~~~~~-~~~~~~~~~~i~vg~~-dg~l~~~d~~tG~~~w~~~~~~~ 630 (900)
.++.+|-++. ...|..+|+.||+++.+..++.+... ..++.. +.||.-++ ++..+.||..+-+.+-++...++
T Consensus 54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~--d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~E 131 (264)
T PF05096_consen 54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG--DKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGE 131 (264)
T ss_dssp ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET--TEEEEEESSSSEEEEEETTTTEEEEEEE-SSS
T ss_pred CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC--CEEEEEEecCCeEEEEccccceEEEEEecCCc
Confidence 3567777763 23799999999999999998876532 233333 47888886 67889999999988887776654
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc--CC-ccccCceeeccCCEEEEEeC-CCcEEEEEcCCCCce
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC--GG-SIFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFH 706 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~--~~-~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~ 706 (900)
-... .. ++..+|.......|+.+|+++-+...+... .+ ++..---+.-.++.||+.-+ ...|.++|+.+ |+
T Consensus 132 GWGL--t~-dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~t--G~ 206 (264)
T PF05096_consen 132 GWGL--TS-DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRIDPET--GK 206 (264)
T ss_dssp --EE--EE-CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEEETTT---B
T ss_pred ceEE--Ec-CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCCC--Ce
Confidence 4332 12 356788877778999999998877665544 22 11111111112478887765 45688899988 98
Q ss_pred eeeEeec
Q 002615 707 TLWLHEL 713 (900)
Q Consensus 707 ~~w~~~~ 713 (900)
+.-.++.
T Consensus 207 V~~~iDl 213 (264)
T PF05096_consen 207 VVGWIDL 213 (264)
T ss_dssp EEEEEE-
T ss_pred EEEEEEh
Confidence 8766654
No 385
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.14 E-value=0.2 Score=49.75 Aligned_cols=181 Identities=11% Similarity=0.111 Sum_probs=108.5
Q ss_pred CCEEEEecCCCeEEEEECCCCe-EEE--eeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee-EeecCCc
Q 002615 641 RQLIWCGSHDHNLYALDFRNYR-CVY--KLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW-LHELEVP 716 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~-~~w--~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w-~~~~~~~ 716 (900)
.+++|++.++.+|..+|..+-. +.. .+...+ ......+ .++..|++..+..+..+|..+.+.-++- ++....
T Consensus 96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~g-yaygv~v--sGn~aYVadlddgfLivdvsdpssP~lagrya~~~- 171 (370)
T COG5276 96 EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDG-YAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPG- 171 (370)
T ss_pred ccEEEEEcCCCceEEEeccCCCCcceeccccCCc-eEEEEEe--cCCEEEEeeccCcEEEEECCCCCCceeeeeeccCC-
Confidence 4788999888899999986532 221 122211 1112223 2588999997777888998763322222 121111
Q ss_pred ceeeeeeeeCCCEEEEEeecCcEEEEC-CC---CCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCcee
Q 002615 717 AFASLCITSANRHVICCLVDGHVVALD-SS---GSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLL 792 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~---G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~ 792 (900)
..+-....++++.|++..++++...| ++ -.++-++..+....+. ...++..|+.-.+-.+...|..+-+-.
T Consensus 172 -~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv----~vsdnr~y~vvy~egvlivd~s~~ssp 246 (370)
T COG5276 172 -GDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSV----SVSDNRAYLVVYDEGVLIVDVSGPSSP 246 (370)
T ss_pred -CCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEE----EecCCeeEEEEcccceEEEecCCCCCc
Confidence 11223445688999999999999999 43 2344455555433332 234678888888878999997766655
Q ss_pred eEEe---cCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 793 WEYS---VGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 793 w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
|.+. ...+...+ .....+...|+...+..+-+.|.++.
T Consensus 247 ~~~gsyet~~p~~~s------------~v~Vs~~~~Yvadga~gl~~idisnp 287 (370)
T COG5276 247 TVFGSYETSNPVSIS------------TVPVSGEYAYVADGAKGLPIIDISNP 287 (370)
T ss_pred eEeeccccCCccccc------------ceecccceeeeeccccCceeEeccCC
Confidence 6443 22221111 11233788888888877888877654
No 386
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.12 E-value=0.48 Score=51.82 Aligned_cols=225 Identities=13% Similarity=0.175 Sum_probs=136.7
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeC-CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEE
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYK-GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWC 646 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~d-g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~ 646 (900)
.+..++.......-....+........+...+..+|+.+.+ +.+..+|..+-+..-....+. ......++++++.+|+
T Consensus 54 ~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV 132 (381)
T COG3391 54 DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYV 132 (381)
T ss_pred eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEE
Confidence 46666655333222222222222355677777889988754 789999977766665554443 3334456667788999
Q ss_pred ecC---CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEe-CCCcEEEEEcCCCCceeeeEeecC---Ccce-
Q 002615 647 GSH---DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAS-TSGRLTAISVKALPFHTLWLHELE---VPAF- 718 (900)
Q Consensus 647 gs~---dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t-~~g~l~~~~~~~~~g~~~w~~~~~---~~~~- 718 (900)
+.. ++.+..+|..+++.+-....+... ...++++++..+|+.. .++.+..+|.++ ..+|+ ... ....
T Consensus 133 ~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~---~~v~~-~~~~~~~~~~~ 207 (381)
T COG3391 133 ANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSG---NSVVR-GSVGSLVGVGT 207 (381)
T ss_pred EecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCC---cceec-cccccccccCC
Confidence 765 688999999999887775554423 4456666678798887 577899999664 55554 211 1111
Q ss_pred --eeeeeeeCCCEEEEEeec---CcEEEEC-CCCCEEee-ecCCCceeccccccccCCCeEEEEee-CCeEEEEeCCCCc
Q 002615 719 --ASLCITSANRHVICCLVD---GHVVALD-SSGSIIWR-CRTGGPIFAGPCTSFALPSQVLICSR-NGSIYSFEQESGN 790 (900)
Q Consensus 719 --~s~~~~~~~~~i~~~~~~---g~v~~~d-~~G~~~w~-~~~~~~~~~~~~~~~~~~~~l~~g~~-dg~l~~~d~~tG~ 790 (900)
....+..++..+|+.... +.+..+| .++...+. ...+.. ........-.+..+|+... .+.++.+|..+.+
T Consensus 208 ~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~ 286 (381)
T COG3391 208 GPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDR 286 (381)
T ss_pred CCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCc
Confidence 233455667778887654 4888999 77777654 333321 0000111223456676633 4789999988877
Q ss_pred eeeEEecCC
Q 002615 791 LLWEYSVGD 799 (900)
Q Consensus 791 ~~w~~~~~~ 799 (900)
+.-....+.
T Consensus 287 v~~~~~~~~ 295 (381)
T COG3391 287 VVKTGPTGN 295 (381)
T ss_pred eeeeecccc
Confidence 765544433
No 387
>CHL00124 acpP acyl carrier protein; Validated
Probab=97.11 E-value=0.0013 Score=53.88 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhcccCC--cccccCCCccc-cCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 359 SDLLQVIRKAFGHALMV--EEVLHHDNFFT-MGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~--~~i~~~~~Ff~-lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
.++.+.+++++++.+++ ..+..+++|.+ +|.|||.++.|...+ .++...+...+|+..++.++..+.
T Consensus 4 ~~i~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 79 (82)
T CHL00124 4 NDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQKI 79 (82)
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 46777888888888877 46999999988 999999999987755 467777999999999999998754
No 388
>smart00823 PKS_PP Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.
Probab=97.11 E-value=0.0013 Score=54.31 Aligned_cols=65 Identities=23% Similarity=0.384 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcccCCcc---cccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 360 DLLQVIRKAFGHALMVEE---VLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 360 ~~~~~~~~~~~~~l~~~~---i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
.+...+...|...++... +..+.+||++|+||+.++++...+ .++...++.+||+..|+.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~~ 85 (86)
T smart00823 12 LLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAAE 85 (86)
T ss_pred HHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHHh
Confidence 456677788887776632 478889999999999999887643 47788899999999999888653
No 389
>PRK00982 acpP acyl carrier protein; Provisional
Probab=97.10 E-value=0.0013 Score=53.16 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcccCCc--ccccCCCc-cccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 360 DLLQVIRKAFGHALMVE--EVLHHDNF-FTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 360 ~~~~~~~~~~~~~l~~~--~i~~~~~F-f~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
++.+.++++++++++.+ .+..+.+| -++|-|||.+++|...+ .++...+.+.+|+..|+.++..+
T Consensus 3 ~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 76 (78)
T PRK00982 3 EIFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEKH 76 (78)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHHh
Confidence 46677888888888774 58888999 79999999999998765 47778899999999999999764
No 390
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=97.10 E-value=0.026 Score=58.91 Aligned_cols=200 Identities=7% Similarity=0.014 Sum_probs=100.9
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee--------EeecCCc-ceeeeee-eeCCCEEEEEeecCcE
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW--------LHELEVP-AFASLCI-TSANRHVICCLVDGHV 739 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w--------~~~~~~~-~~~s~~~-~~~~~~i~~~~~~g~v 739 (900)
.|.+...-....+...|...+..+.++.||....+....- +...+.. .+ +... ....+.+..++.++.+
T Consensus 124 ~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~-glsWn~~~~g~Lls~~~d~~i 202 (422)
T KOG0264|consen 124 DGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGY-GLSWNRQQEGTLLSGSDDHTI 202 (422)
T ss_pred CccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccc-ccccccccceeEeeccCCCcE
Confidence 3444333333333355566678889999986653332221 1111111 11 1111 1235788888899999
Q ss_pred EEEC-C-CCCE---E---eeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCC--ceeeEEecC-Cceecccccc
Q 002615 740 VALD-S-SGSI---I---WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESG--NLLWEYSVG-DPITASAYID 808 (900)
Q Consensus 740 ~~~d-~-~G~~---~---w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG--~~~w~~~~~-~~~~~~~~~~ 808 (900)
.++| . .+.. + -.+.....+..-........+.+-..+.|+.|..||..++ +..-..+.+ .++.+..+-
T Consensus 203 ~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn- 281 (422)
T KOG0264|consen 203 CLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN- 281 (422)
T ss_pred EEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC-
Confidence 9998 3 2221 1 0111111111000011112233444577899999998853 222222222 222222221
Q ss_pred cccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee---eCCEEEEeeeCC
Q 002615 809 EHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM---IGGRVFVGCRDD 885 (900)
Q Consensus 809 ~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~---~~~~l~vg~~dg 885 (900)
..++..++.|+.|++|.+||.++= .+.+-.++.+...+...-. .+..|-.++.|+
T Consensus 282 ----------p~~~~ilAT~S~D~tV~LwDlRnL------------~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~ 339 (422)
T KOG0264|consen 282 ----------PFNEFILATGSADKTVALWDLRNL------------NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDR 339 (422)
T ss_pred ----------CCCCceEEeccCCCcEEEeechhc------------ccCceeccCCCcceEEEEeCCCCCceeEecccCC
Confidence 122778889999999999999853 1222233333332222111 234566677899
Q ss_pred eEEEEEcc
Q 002615 886 YIYCIALE 893 (900)
Q Consensus 886 ~l~~ld~~ 893 (900)
.+..||+.
T Consensus 340 rl~vWDls 347 (422)
T KOG0264|consen 340 RLNVWDLS 347 (422)
T ss_pred cEEEEecc
Confidence 99999985
No 391
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=97.09 E-value=0.0007 Score=74.09 Aligned_cols=165 Identities=13% Similarity=-0.003 Sum_probs=107.0
Q ss_pred EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe
Q 002615 583 IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR 662 (900)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~ 662 (900)
+..+....-+..+......|..|+.+|.|.+||++.+++..+...+-....+..+.+...+...|+.|+.+..||.+...
T Consensus 66 ~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G 145 (825)
T KOG0267|consen 66 LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG 145 (825)
T ss_pred eeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC
Confidence 44444444467777777788899999999999999998776544333223333455544444458889999999998777
Q ss_pred EEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEE
Q 002615 663 CVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVAL 742 (900)
Q Consensus 663 ~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~ 742 (900)
|...+..+..+.....+.+.+..+..++.+..+..||... |+..-.++.+.....++.+.+.+-.+-.|+.|+.+-.+
T Consensus 146 c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a--gk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~ 223 (825)
T KOG0267|consen 146 CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA--GKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFW 223 (825)
T ss_pred ceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccc--cccccccccccccccccccCchhhhhccCCCCceeeee
Confidence 8777765444445555666555777788889999999877 88776666443322333332222234445666777777
Q ss_pred C-CCCCEE
Q 002615 743 D-SSGSII 749 (900)
Q Consensus 743 d-~~G~~~ 749 (900)
| .+-+.+
T Consensus 224 dletfe~I 231 (825)
T KOG0267|consen 224 DLETFEVI 231 (825)
T ss_pred ccceeEEe
Confidence 6 544443
No 392
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=97.08 E-value=0.086 Score=55.02 Aligned_cols=146 Identities=12% Similarity=0.213 Sum_probs=77.6
Q ss_pred eCCEEEEEECCCCcEEEEEecCCcee---------------------------eeeeEeCCCCEEEEecCCCeEEEEECC
Q 002615 607 YKGKIYFLDYLTGDIYWTFQTCGEVK---------------------------CQPVVDAPRQLIWCGSHDHNLYALDFR 659 (900)
Q Consensus 607 ~dg~l~~~d~~tG~~~w~~~~~~~~~---------------------------~~~~~~~~~~~i~~gs~dg~l~~~d~~ 659 (900)
.|+.++.+|++||+++|.....+.+. -+.-...++.+|+..-+-..|+++|.+
T Consensus 94 ~d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~ 173 (299)
T PF14269_consen 94 LDDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPS 173 (299)
T ss_pred ecceeEEeccCCCCEEEEEEhhheecccccccccccccCCCcCCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECC
Confidence 36679999999999998754321110 001112233445444455789999999
Q ss_pred CCeEEEeeccC-Ccc-------cc---Cceee---ccCCEEEE-Ee----------CCCcEEEEEcCCCCceeeeEee-c
Q 002615 660 NYRCVYKLPCG-GSI-------FG---SPAID---EVHDVLYV-AS----------TSGRLTAISVKALPFHTLWLHE-L 713 (900)
Q Consensus 660 ~g~~~w~~~~~-~~~-------~~---~~~~~---~~~~~l~v-~t----------~~g~l~~~~~~~~~g~~~w~~~-~ 713 (900)
+|+++|+.... +.- ++ .+-+. +..+.|-+ -. ..+.++.+|..+.+-+.++.+. .
T Consensus 174 tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~~~~~~~~~~s~~~v~~ld~~~~~~~~~~~~~~~ 253 (299)
T PF14269_consen 174 TGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNANSDFNGTEPSRGLVLELDPETMTVTLVREYSDH 253 (299)
T ss_pred CCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCCCCCCCCCcCCCceEEEEECCCCEEEEEEEeecC
Confidence 99999997433 110 10 01111 01122222 11 2456777777763333334333 1
Q ss_pred CCcce----eeeeeeeCCCEEEEE-eecCcEEEECCCCCEEeeec
Q 002615 714 EVPAF----ASLCITSANRHVICC-LVDGHVVALDSSGSIIWRCR 753 (900)
Q Consensus 714 ~~~~~----~s~~~~~~~~~i~~~-~~~g~v~~~d~~G~~~w~~~ 753 (900)
..+.+ .+....+ +|.++++ +..+.+.=++.+|+++|++.
T Consensus 254 ~~~~~s~~~G~~Q~L~-nGn~li~~g~~g~~~E~~~~G~vv~~~~ 297 (299)
T PF14269_consen 254 PDGFYSPSQGSAQRLP-NGNVLIGWGNNGRISEFTPDGEVVWEAQ 297 (299)
T ss_pred CCcccccCCCcceECC-CCCEEEecCCCceEEEECCCCCEEEEEE
Confidence 22221 2223333 4555555 44567777778899999874
No 393
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.08 E-value=0.2 Score=55.80 Aligned_cols=181 Identities=13% Similarity=0.101 Sum_probs=92.1
Q ss_pred CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE---EEEecCC--CeEEEEECCCCeEEEeeccCCccccCceeeccC
Q 002615 609 GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL---IWCGSHD--HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVH 683 (900)
Q Consensus 609 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~---i~~gs~d--g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~ 683 (900)
..|+..|...+.. ..+..+......|.+.+++.. +|+...+ ..||..+..+|+........+. ...|..++++
T Consensus 165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~-~~~p~wSPDG 242 (428)
T PRK01029 165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGN-QLMPTFSPRK 242 (428)
T ss_pred ceEEEEcCCCCCc-eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCC-ccceEECCCC
Confidence 3688888554433 233334444567888887653 3444333 3699999988876544444443 3357777766
Q ss_pred CEEEEEeC-CC--cEEE--EEcCCCC-ceeeeEeecCCcceeeeeeeeCCCEEEEEe-ecC--cEEEEC-C-CCCEEeee
Q 002615 684 DVLYVAST-SG--RLTA--ISVKALP-FHTLWLHELEVPAFASLCITSANRHVICCL-VDG--HVVALD-S-SGSIIWRC 752 (900)
Q Consensus 684 ~~l~v~t~-~g--~l~~--~~~~~~~-g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~-~~g--~v~~~d-~-~G~~~w~~ 752 (900)
..|++.+. .| .++. ++..... |+..............+.+.+++..++..+ .+| .++.++ . .|...-.+
T Consensus 243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l 322 (428)
T PRK01029 243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL 322 (428)
T ss_pred CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe
Confidence 67766542 22 3444 4544311 222222211112224566777777666554 334 466665 2 22222222
Q ss_pred cCCCceeccccccccCCCeEEEEeeC---CeEEEEeCCCCcee
Q 002615 753 RTGGPIFAGPCTSFALPSQVLICSRN---GSIYSFEQESGNLL 792 (900)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~l~~g~~d---g~l~~~d~~tG~~~ 792 (900)
.........+..+. .+..|++.+.+ ..|+.+|.++|+..
T Consensus 323 t~~~~~~~~p~wSP-DG~~Laf~~~~~g~~~I~v~dl~~g~~~ 364 (428)
T PRK01029 323 TKKYRNSSCPAWSP-DGKKIAFCSVIKGVRQICVYDLATGRDY 364 (428)
T ss_pred ccCCCCccceeECC-CCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence 21111112222222 23445554432 36899999988764
No 394
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=97.07 E-value=0.0041 Score=66.45 Aligned_cols=209 Identities=14% Similarity=0.107 Sum_probs=114.5
Q ss_pred cCCccccccccccccccccccccceE--EeeCCceEEEEecCCCeEEEEE------CCCCc---EEEE-EecCCceeece
Q 002615 526 PRNKRGFIQELWKVHMESCVDASPLV--VLKDSDIYLFVGSHSHKFICAD------AKRSS---VLWE-IKLEGRIECSA 593 (900)
Q Consensus 526 ~~~~~~~~~~~W~~~~~~~v~~sp~v--~~~~~~~~v~igs~~g~l~~~d------~~tG~---~~w~-~~~~~~~~~~~ 593 (900)
+.+....+..+|++.-.+ .|++ +.......+|.|++||.|.+|+ +.+.- .+-. +..+..-....
T Consensus 327 ~~s~~~~~epi~tfraH~----gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l 402 (577)
T KOG0642|consen 327 KKSAEKDVEPILTFRAHE----GPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLL 402 (577)
T ss_pred CCccccceeeeEEEeccc----CceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeee
Confidence 344455677778876532 2322 2334577999999999999993 33221 1111 11111111234
Q ss_pred eEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEe--CCCCEEEEecCCCeEEEEECCCCeEEEeecc--
Q 002615 594 AVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVD--APRQLIWCGSHDHNLYALDFRNYRCVYKLPC-- 669 (900)
Q Consensus 594 ~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-- 669 (900)
.++....++...+.||+++.|+...... -.|...........++ ..+-.+.+.+. .+..+++.+.++...+..
T Consensus 403 ~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~--~~~~~~~~~~ev~s~~~~~~ 479 (577)
T KOG0642|consen 403 ALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASF--RFGYTSIDDMEVVSDLLIFE 479 (577)
T ss_pred eecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhc--ccccccchhhhhhhheeecc
Confidence 4555556788888999999999766555 2333222111111111 11111112222 122222222222221111
Q ss_pred ----CC----ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEE
Q 002615 670 ----GG----SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVA 741 (900)
Q Consensus 670 ----~~----~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~ 741 (900)
++ +-....+..+..+..|.+-.++.+..+|..+ |+++.....+...+.+.++.+.+.++..++.++.+..
T Consensus 480 s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~--~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l 557 (577)
T KOG0642|consen 480 SSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT--GKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRL 557 (577)
T ss_pred ccCCCcccccCccceEEecCCCCeeEecccCCceecccccc--cccchheeeccceecceeecCCCceEEeecCCceeeh
Confidence 11 0111122333446677777888899998777 8888887777777778888888888888888887776
Q ss_pred EC
Q 002615 742 LD 743 (900)
Q Consensus 742 ~d 743 (900)
+.
T Consensus 558 ~k 559 (577)
T KOG0642|consen 558 WK 559 (577)
T ss_pred hh
Confidence 65
No 395
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=97.07 E-value=0.016 Score=59.20 Aligned_cols=183 Identities=14% Similarity=0.174 Sum_probs=109.7
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEee-------ccC----CccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKL-------PCG----GSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~-------~~~----~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w 709 (900)
+..|..||.|..+..|.+-.+...... ..+ |.+...|.. .+.|+.++.+..+..||..+ |+.+-
T Consensus 94 D~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA---~NVLlsag~Dn~v~iWnv~t--geali 168 (472)
T KOG0303|consen 94 DCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA---PNVLLSAGSDNTVSIWNVGT--GEALI 168 (472)
T ss_pred CceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc---hhhHhhccCCceEEEEeccC--Cceee
Confidence 456677788888888875443222111 111 112222222 25566777889999999998 88887
Q ss_pred EeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCCceeccccccccCCCeEEEEe----eCCeEEEE
Q 002615 710 LHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGGPIFAGPCTSFALPSQVLICS----RNGSIYSF 784 (900)
Q Consensus 710 ~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~----~dg~l~~~ 784 (900)
+.+ +.....+..+..++..+...+.|..|.++| .+|++++........-..-++ +..++.++... .+..+-.|
T Consensus 169 ~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Rai-fl~~g~i~tTGfsr~seRq~aLw 246 (472)
T KOG0303|consen 169 TLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAI-FLASGKIFTTGFSRMSERQIALW 246 (472)
T ss_pred ecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeE-EeccCceeeeccccccccceecc
Confidence 776 555556777877888888889999999999 999999876322111111111 22233344332 24456667
Q ss_pred eCCCCce---eeEEecCCceecccccccccccccccccCCCeEEEEEc-CCCcEEEEEeecC
Q 002615 785 EQESGNL---LWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICT-SSGSIHILRVNLD 842 (900)
Q Consensus 785 d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~~G~v~~~d~~~~ 842 (900)
|+++-+. .-+++..+ .+..||.+.+ .+.+|.++ -||.|+.|+..+.
T Consensus 247 dp~nl~eP~~~~elDtSn-Gvl~PFyD~d-----------t~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 247 DPNNLEEPIALQELDTSN-GVLLPFYDPD-----------TSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred CcccccCcceeEEeccCC-ceEEeeecCC-----------CCEEEEEecCCcceEEEEecCC
Confidence 6654221 22333333 3445666653 45666554 5889999988765
No 396
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.07 E-value=0.031 Score=61.84 Aligned_cols=105 Identities=10% Similarity=0.063 Sum_probs=72.0
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEe-cCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcE---EEEEe---cC
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIK-LEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDI---YWTFQ---TC 628 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~---~w~~~---~~ 628 (900)
...++.+|+..|.||.|+..+|+.+-... ....+.+..+++.+..++.+|+..|.|..+-...+.. ..... .+
T Consensus 44 t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~ 123 (726)
T KOG3621|consen 44 TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSH 123 (726)
T ss_pred CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccC
Confidence 36789999999999999999887653322 1344555667777777788888888776665444322 11111 12
Q ss_pred CceeeeeeEeCCCCEEEEecCCCeEEEEECCC
Q 002615 629 GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRN 660 (900)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~ 660 (900)
+..+++..++.+...+|.|...|.|.+..+.+
T Consensus 124 ~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 124 KCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CceEEEEEecccccEEeecCCCceEEEEEech
Confidence 33456667787888899999999888776655
No 397
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.06 E-value=0.031 Score=63.17 Aligned_cols=204 Identities=16% Similarity=0.230 Sum_probs=104.4
Q ss_pred eeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCc-eeeeeeEeCCCCEEEEecCC-C----eEEEEECCCC-----
Q 002615 593 AAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGE-VKCQPVVDAPRQLIWCGSHD-H----NLYALDFRNY----- 661 (900)
Q Consensus 593 ~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~~~~~~i~~gs~d-g----~l~~~d~~~g----- 661 (900)
.++++.++.|++|+.+|.|..+| ..-+....++.... +....-.......+++-..| + .|..||++.-
T Consensus 29 sc~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 29 SCCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred eEEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 46677788999999999999998 33333333333222 22222223222344443322 2 4666665421
Q ss_pred -eEE---Eeecc--C--CccccCceeeccCCEEEEEeCCCcEEEEEcC--CCCce-eeeEeecCCcceeeeeeeeCCCE-
Q 002615 662 -RCV---YKLPC--G--GSIFGSPAIDEVHDVLYVASTSGRLTAISVK--ALPFH-TLWLHELEVPAFASLCITSANRH- 729 (900)
Q Consensus 662 -~~~---w~~~~--~--~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~--~~~g~-~~w~~~~~~~~~~s~~~~~~~~~- 729 (900)
.++ ..+.. + ..+.++.++..+-..+.+|-.+|.|+++.-+ .+.|. .........+ .....+..++..
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~p-ITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEP-ITGLALRSDGKSV 186 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCC-ceeeEEecCCcee
Confidence 233 11221 1 2344555666656778999999999988522 11122 1111222222 233444444444
Q ss_pred EEEEeecCcEEEECCCCCE-Eee-ecCCCceeccccccccCC-CeEEEEeeCCeEEEEeCCCCceeeEEecCCcee
Q 002615 730 VICCLVDGHVVALDSSGSI-IWR-CRTGGPIFAGPCTSFALP-SQVLICSRNGSIYSFEQESGNLLWEYSVGDPIT 802 (900)
Q Consensus 730 i~~~~~~g~v~~~d~~G~~-~w~-~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~ 802 (900)
+|+++. ..|..|.-+|+. .-. .+..+ .+..|...... +.+.++ .+..|+.|+...-+..|.+..+..-.
T Consensus 187 lFv~Tt-~~V~~y~l~gr~p~~~~ld~~G--~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 187 LFVATT-EQVMLYSLSGRTPSLKVLDNNG--ISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKE 258 (933)
T ss_pred EEEEec-ceeEEEEecCCCcceeeeccCC--ccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEE
Confidence 566665 456666622332 222 22222 12223223222 234444 45569999988777889888766543
No 398
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.01 E-value=0.15 Score=59.15 Aligned_cols=291 Identities=11% Similarity=0.053 Sum_probs=136.0
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEecCCce---eeceeEec--CCCEEEEEeeCCEEEEEECCCCcEEEEEecC
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRI---ECSAAVLA--DFSQVVVGCYKGKIYFLDYLTGDIYWTFQTC 628 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~--~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~ 628 (900)
+.-...++++...-.|..||-..|+.+-.+..+... .+..++.+ |...+.+++.||.|..|+. -...|. ..
T Consensus 1073 hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~--y~~~~~--~~ 1148 (1387)
T KOG1517|consen 1073 HPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKD--YADKWK--KP 1148 (1387)
T ss_pred cCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecc--cccccC--Cc
Confidence 334455666654556888888888877666654321 12233332 3346778888888887752 111220 00
Q ss_pred CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceee
Q 002615 629 GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTL 708 (900)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~ 708 (900)
.-+. .+..-.+.+......|-+..|... .|.|+++..-..|..||... -...
T Consensus 1149 eLVT---aw~~Ls~~~~~~r~~~~v~dWqQ~-----------------------~G~Ll~tGd~r~IRIWDa~~--E~~~ 1200 (1387)
T KOG1517|consen 1149 ELVT---AWSSLSDQLPGARGTGLVVDWQQQ-----------------------SGHLLVTGDVRSIRIWDAHK--EQVV 1200 (1387)
T ss_pred eeEE---eeccccccCccCCCCCeeeehhhh-----------------------CCeEEecCCeeEEEEEeccc--ceeE
Confidence 0000 000000111111111222222211 25566655555677777664 2222
Q ss_pred eEeecCCcce-eeeee-eeCCCEEEEEeecCcEEEEC-CCC-----CEEeeecCC-CceeccccccccCCCeEEEEeeCC
Q 002615 709 WLHELEVPAF-ASLCI-TSANRHVICCLVDGHVVALD-SSG-----SIIWRCRTG-GPIFAGPCTSFALPSQVLICSRNG 779 (900)
Q Consensus 709 w~~~~~~~~~-~s~~~-~~~~~~i~~~~~~g~v~~~d-~~G-----~~~w~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg 779 (900)
-....+.... .+... ...++.+.+|..||.+..|| ..- -..|+--.. .++.... +.....+.|+.|+.+|
T Consensus 1201 ~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~s-lq~~G~~elvSgs~~G 1279 (1387)
T KOG1517|consen 1201 ADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLS-LQRQGLGELVSGSQDG 1279 (1387)
T ss_pred eecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEE-eecCCCcceeeeccCC
Confidence 2222221111 11111 12256788888899999999 322 123443221 1222211 1111234799999999
Q ss_pred eEEEEeCCCCceee--EEec----CCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCccccccccccc
Q 002615 780 SIYSFEQESGNLLW--EYSV----GDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDH 853 (900)
Q Consensus 780 ~l~~~d~~tG~~~w--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~ 853 (900)
.|+.||.......- +... ++..+ ...+.+ ....++.|+. +.|.+|+..............
T Consensus 1280 ~I~~~DlR~~~~e~~~~iv~~~~yGs~lT-al~VH~-----------hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~- 1345 (1387)
T KOG1517|consen 1280 DIQLLDLRMSSKETFLTIVAHWEYGSALT-ALTVHE-----------HAPIIASGSA-QLIKIYSLSGEQLNIIKYNPG- 1345 (1387)
T ss_pred eEEEEecccCcccccceeeeccccCccce-eeeecc-----------CCCeeeecCc-ceEEEEecChhhhcccccCcc-
Confidence 99999987632111 1111 11111 112222 2556666665 889999987543322210000
Q ss_pred ceeeeeeeccCCccccCceeeC--CEEEEeeeCCeEEEEEcccccc
Q 002615 854 MVQEFAKLELQGDIFSSPVMIG--GRVFVGCRDDYIYCIALETQHL 897 (900)
Q Consensus 854 ~~~~~~~~~l~~~~~ss~~~~~--~~l~vg~~dg~l~~ld~~tg~~ 897 (900)
+ ....-...++..++. =.+.+|..|..+-+|....+++
T Consensus 1346 ----F--~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1346 ----F--MGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred ----c--ccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcCC
Confidence 0 000001123333333 2456677788887877665543
No 399
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=97.00 E-value=0.11 Score=48.88 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=97.5
Q ss_pred CCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec----CC---ceeeeeeE
Q 002615 565 HSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT----CG---EVKCQPVV 637 (900)
Q Consensus 565 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~----~~---~~~~~~~~ 637 (900)
.|..||.-|-.+|+....+..+..-. -..++=++-.+..|+.|.+|.+||+.-...+..... ++ ..+....+
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghi-lalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHI-LALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccE-EEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 46678888888888776666554322 234444555777899999999999876655544322 11 34455667
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcC
Q 002615 638 DAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 638 ~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
++.+..+..|-.|..-..||+..|..+.++..+..-+.+.-+++....++.++.+..+..-|++
T Consensus 240 dpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 8877888888888888999999999999988776655556666655678888888888877766
No 400
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.98 E-value=0.0062 Score=70.68 Aligned_cols=227 Identities=15% Similarity=0.131 Sum_probs=122.1
Q ss_pred CEEEEEeeCCEEEEEECCC---CcE---EEEEec-CCceeeeeeEeCC-CCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 600 SQVVVGCYKGKIYFLDYLT---GDI---YWTFQT-CGEVKCQPVVDAP-RQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~t---G~~---~w~~~~-~~~~~~~~~~~~~-~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
+.|.-|+.||.|..||+.. +.. +-++.. .+.+.. .-+... ++.+..|+.+|.|+.||+++-+.- +..++
T Consensus 81 GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~g-LDfN~~q~nlLASGa~~geI~iWDlnn~~tP--~~~~~ 157 (1049)
T KOG0307|consen 81 GLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLG-LDFNPFQGNLLASGADDGEILIWDLNKPETP--FTPGS 157 (1049)
T ss_pred ceeeccccCCceEEecchhhccCcchHHHhhhcccCCceee-eeccccCCceeeccCCCCcEEEeccCCcCCC--CCCCC
Confidence 4677788999999999755 211 222222 344444 333333 346777889999999998763221 11111
Q ss_pred c-cccC-ceeec---cCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc--eeeeeeeeCC-CEEEEEeecCc---EE
Q 002615 672 S-IFGS-PAIDE---VHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA--FASLCITSAN-RHVICCLVDGH---VV 740 (900)
Q Consensus 672 ~-~~~~-~~~~~---~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~--~~s~~~~~~~-~~i~~~~~~g~---v~ 740 (900)
. .... -++.- ....+..++.+|+...||++. .+++-........ .+.....+++ ..+++++.|.+ |.
T Consensus 158 ~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~--~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviq 235 (1049)
T KOG0307|consen 158 QAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK--KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQ 235 (1049)
T ss_pred CCCcccceEeccchhhhHHhhccCCCCCceeccccC--CCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeE
Confidence 1 0000 01111 113345567788999999886 3444444333221 2233333332 35666665543 33
Q ss_pred EEC-C-CCCEEeeec-CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceeccccccccccccccc
Q 002615 741 ALD-S-SGSIIWRCR-TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLES 817 (900)
Q Consensus 741 ~~d-~-~G~~~w~~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 817 (900)
.+| + .-..+-.++ ....+.+.... ..++..++.+..|+.++|||.+||+++-++...++.+....+
T Consensus 236 lWDlR~assP~k~~~~H~~GilslsWc-~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w---------- 304 (1049)
T KOG0307|consen 236 LWDLRFASSPLKILEGHQRGILSLSWC-PQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQW---------- 304 (1049)
T ss_pred eecccccCCchhhhcccccceeeeccC-CCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeee----------
Confidence 444 1 111111111 11122332211 112345677778999999999999999887765543332211
Q ss_pred ccCCCeEEEEEcCCCcEEEEEeecC
Q 002615 818 CLSIDRLVCICTSSGSIHILRVNLD 842 (900)
Q Consensus 818 ~~~~~~~l~~g~~~G~v~~~d~~~~ 842 (900)
+...-+.+.+++-+|.|-++...+.
T Consensus 305 ~pr~P~~~A~asfdgkI~I~sl~~~ 329 (1049)
T KOG0307|consen 305 CPRNPSVMAAASFDGKISIYSLQGT 329 (1049)
T ss_pred cCCCcchhhhheeccceeeeeeecC
Confidence 1112457777888999999988765
No 401
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.93 E-value=0.61 Score=47.93 Aligned_cols=282 Identities=16% Similarity=0.165 Sum_probs=132.1
Q ss_pred EEEEEeeC----CEEEEEECC--CCcEEEEEec--CCceeeeeeEeCCCCEEEEecC---CCeE--EEEECCCCeEEEe-
Q 002615 601 QVVVGCYK----GKIYFLDYL--TGDIYWTFQT--CGEVKCQPVVDAPRQLIWCGSH---DHNL--YALDFRNYRCVYK- 666 (900)
Q Consensus 601 ~i~vg~~d----g~l~~~d~~--tG~~~w~~~~--~~~~~~~~~~~~~~~~i~~gs~---dg~l--~~~d~~~g~~~w~- 666 (900)
.+|+|++. ..||.|+.. +|++ |..+. .....+...+.++.+.+|++-. +|++ |.+|..+|+....
T Consensus 4 ~~YiGtyT~~~s~gI~v~~ld~~~g~l-~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln 82 (346)
T COG2706 4 TVYIGTYTKRESQGIYVFNLDTKTGEL-SLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLN 82 (346)
T ss_pred EEEEeeecccCCCceEEEEEeCccccc-chhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEee
Confidence 58888875 468777655 4443 22111 1122233456666678888743 4555 5556666765433
Q ss_pred -eccCCccccCceeeccCCEEEEEeCC-CcEEEEEcCCCCceeeeEee-----cC-------CcceeeeeeeeCCCEEEE
Q 002615 667 -LPCGGSIFGSPAIDEVHDVLYVASTS-GRLTAISVKALPFHTLWLHE-----LE-------VPAFASLCITSANRHVIC 732 (900)
Q Consensus 667 -~~~~~~~~~~~~~~~~~~~l~v~t~~-g~l~~~~~~~~~g~~~w~~~-----~~-------~~~~~s~~~~~~~~~i~~ 732 (900)
....+......+++.++..|++++.. |.+..+-+++ .|.+.-... .. .+......+.+++.++++
T Consensus 83 ~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~-dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v 161 (346)
T COG2706 83 RQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQA-DGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVV 161 (346)
T ss_pred ccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEccc-CCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEE
Confidence 33344433455667766788888865 4455555543 243221111 11 011123345566667776
Q ss_pred Eee-cCcEEEEC-CCCCEEeeecCCCceecccc--ccccCCCeEEEEee-CCeEEEEeCCC--CceeeE--E-ecCCcee
Q 002615 733 CLV-DGHVVALD-SSGSIIWRCRTGGPIFAGPC--TSFALPSQVLICSR-NGSIYSFEQES--GNLLWE--Y-SVGDPIT 802 (900)
Q Consensus 733 ~~~-~g~v~~~d-~~G~~~w~~~~~~~~~~~~~--~~~~~~~~l~~g~~-dg~l~~~d~~t--G~~~w~--~-~~~~~~~ 802 (900)
..- ...++.|+ .+|++.-.....-+.-+.|- +........|+.+. +++|-+|..+. |++.-- . .++....
T Consensus 162 ~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~ 241 (346)
T COG2706 162 PDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFT 241 (346)
T ss_pred eecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccC
Confidence 542 34688888 77765322111111112221 11112345565543 66666655443 544311 1 1111110
Q ss_pred cccccccccccccccccCCCeEEEEEcCC-CcEEEEEeecCcccccccccccceeeeeeeccCCccccCcee--eCCEEE
Q 002615 803 ASAYIDEHLQLKLESCLSIDRLVCICTSS-GSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVM--IGGRVF 879 (900)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~-G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~--~~~~l~ 879 (900)
...... .-....+++++|++... ..|.+|..... .++ ..........+..-....+ .++.|+
T Consensus 242 g~~~~a------aIhis~dGrFLYasNRg~dsI~~f~V~~~-~g~--------L~~~~~~~teg~~PR~F~i~~~g~~Li 306 (346)
T COG2706 242 GTNWAA------AIHISPDGRFLYASNRGHDSIAVFSVDPD-GGK--------LELVGITPTEGQFPRDFNINPSGRFLI 306 (346)
T ss_pred CCCcee------EEEECCCCCEEEEecCCCCeEEEEEEcCC-CCE--------EEEEEEeccCCcCCccceeCCCCCEEE
Confidence 000000 01123447788887642 24666655422 110 1222222333321111122 456777
Q ss_pred EeeeCC---eEEEEEcccccccc
Q 002615 880 VGCRDD---YIYCIALETQHLEE 899 (900)
Q Consensus 880 vg~~dg---~l~~ld~~tg~~~~ 899 (900)
+...++ .+|..|.+||++..
T Consensus 307 aa~q~sd~i~vf~~d~~TG~L~~ 329 (346)
T COG2706 307 AANQKSDNITVFERDKETGRLTL 329 (346)
T ss_pred EEccCCCcEEEEEEcCCCceEEe
Confidence 765432 35666888888753
No 402
>PRK09184 acyl carrier protein; Provisional
Probab=96.92 E-value=0.0028 Score=52.05 Aligned_cols=67 Identities=15% Similarity=0.207 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHhcccCC-----cccccCCCccc--cCcchHHHHHHHHHh----CCCc-----hhhhcCCCHHHHHHHHH
Q 002615 359 SDLLQVIRKAFGHALMV-----EEVLHHDNFFT--MGGNSIAAAHVAHNL----GIDM-----RLIYNFPTPSKLEIALL 422 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~-----~~i~~~~~Ff~--lGgdSl~a~~l~~~l----~~~~-----~~~~~~~t~~~l~~~l~ 422 (900)
+++++.++++..+.|++ ++|..+..||. +|.|||.++.|...+ ++.+ ..+..++|++.|+.+|.
T Consensus 5 ~~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~I~ 84 (89)
T PRK09184 5 TALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAYVA 84 (89)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHHHH
Confidence 46788899999888874 46899999866 999999999987654 4544 33667899999999997
Q ss_pred hhc
Q 002615 423 EKK 425 (900)
Q Consensus 423 ~~~ 425 (900)
.+.
T Consensus 85 ~~~ 87 (89)
T PRK09184 85 AHR 87 (89)
T ss_pred Hhh
Confidence 643
No 403
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=96.89 E-value=0.03 Score=60.56 Aligned_cols=120 Identities=8% Similarity=0.052 Sum_probs=93.1
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCc--eeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGR--IECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~--~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
...+..|+..|.|..|+...|++.|++..+.. .........+-+.+|.++.|+.+..|+.+++...-.+......+++
T Consensus 70 t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~s 149 (541)
T KOG4547|consen 70 TSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSS 149 (541)
T ss_pred ceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccce
Confidence 34577799999999999999999999875432 2223333445567999999999999999999887666666667777
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCce
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPA 678 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~ 678 (900)
.++.++++.+.+++ +.|..||.++++++-+|..++...++..
T Consensus 150 l~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~ 191 (541)
T KOG4547|consen 150 LCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLS 191 (541)
T ss_pred EEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEE
Confidence 78888777777775 5799999999999999988776555443
No 404
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.87 E-value=0.52 Score=50.36 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=113.3
Q ss_pred eEEEEECCCCcEEEEEecCCce-eecee---Eec----CCCEEEEEee---------C-CEEEEEECCCC-----cE--E
Q 002615 568 KFICADAKRSSVLWEIKLEGRI-ECSAA---VLA----DFSQVVVGCY---------K-GKIYFLDYLTG-----DI--Y 622 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~-~~~~~---~~~----~~~~i~vg~~---------d-g~l~~~d~~tG-----~~--~ 622 (900)
.|..+|..+.+.+-.+.+...- ..+.+ +.. ...+++||+. . |.|+.|+..+. ++ +
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 4788888888887776665431 11111 222 1457888874 2 88999998874 22 3
Q ss_pred EEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe-EEEeeccCCcc-ccCceeeccCCEEEEEeCCCcEEEEEc
Q 002615 623 WTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR-CVYKLPCGGSI-FGSPAIDEVHDVLYVASTSGRLTAISV 700 (900)
Q Consensus 623 w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~-~~w~~~~~~~~-~~~~~~~~~~~~l~v~t~~g~l~~~~~ 700 (900)
......+.+.+...+ ++.++++. ++.|+.++....+ ..-........ ..+.... ++.+++|.....+..+..
T Consensus 83 ~~~~~~g~V~ai~~~---~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF---NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEEEESS-EEEEEEE---TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred EEEeecCcceEhhhh---CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 344556666554444 35666655 5678888877766 44443333322 2222233 489999998777776643
Q ss_pred CCCCceeeeEe-ecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C-C------CC--E--EeeecCCCceecc---ccc
Q 002615 701 KALPFHTLWLH-ELEVPAFASLCITSANRHVICCLVDGHVVALD-S-S------GS--I--IWRCRTGGPIFAG---PCT 764 (900)
Q Consensus 701 ~~~~g~~~w~~-~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~-~------G~--~--~w~~~~~~~~~~~---~~~ 764 (900)
+....+...-- +.......+..+..+++.++++..+|.++.+. . + +. . +-.+..+..+.+. ...
T Consensus 157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~ 236 (321)
T PF03178_consen 157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLI 236 (321)
T ss_dssp ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS
T ss_pred EccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEee
Confidence 32112222211 12222223334442445888888889988876 2 1 22 1 2333444443332 111
Q ss_pred cc-cCC-----CeEEEEeeCCeEEEEeC
Q 002615 765 SF-ALP-----SQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 765 ~~-~~~-----~~l~~g~~dg~l~~~d~ 786 (900)
.. ... ..++.+|.+|.++++-+
T Consensus 237 ~~~~~~~~~~~~~i~~~T~~G~Ig~l~p 264 (321)
T PF03178_consen 237 PRSGSSESPNRPQILYGTVDGSIGVLIP 264 (321)
T ss_dssp --SSSS-TTEEEEEEEEETTS-EEEEEE
T ss_pred ecCCCCcccccceEEEEecCCEEEEEEe
Confidence 11 111 24889999999997765
No 405
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.34 Score=52.98 Aligned_cols=195 Identities=16% Similarity=0.128 Sum_probs=126.1
Q ss_pred CCceEEEEecC-CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEee---CCEEEEEECCCCcEEEEEecCCc
Q 002615 555 DSDIYLFVGSH-SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCY---KGKIYFLDYLTGDIYWTFQTCGE 630 (900)
Q Consensus 555 ~~~~~v~igs~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~---dg~l~~~d~~tG~~~w~~~~~~~ 630 (900)
..+.++|+.+. ++.+..+|..+-++.-....+. ......++.+++.+|+... ++.+..+|..++++.-....+..
T Consensus 83 ~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~ 161 (381)
T COG3391 83 PAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNT 161 (381)
T ss_pred CCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCC
Confidence 34666887764 4779999988777665555443 2335678888889999876 68999999999988766555432
Q ss_pred eeeeeeEeCCCCEEEEec-CCCeEEEEECCCCeEE-EeeccC---CccccCceeeccCCEEEEEeCC---CcEEEEEcCC
Q 002615 631 VKCQPVVDAPRQLIWCGS-HDHNLYALDFRNYRCV-YKLPCG---GSIFGSPAIDEVHDVLYVASTS---GRLTAISVKA 702 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs-~dg~l~~~d~~~g~~~-w~~~~~---~~~~~~~~~~~~~~~l~v~t~~---g~l~~~~~~~ 702 (900)
. ...+++++++.+|+.. .++.+..+|.++-... +..... +..-....+..++..+|+.... +.+..+|..+
T Consensus 162 P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~ 240 (381)
T COG3391 162 P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT 240 (381)
T ss_pred c-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC
Confidence 2 4456677778788875 6788999996654444 221111 1112233455566778887655 4888888777
Q ss_pred CCceeeeEe-ecCCcceeeeeeeeCCCEEEEEeec-CcEEEEC-CCCCEEeeec
Q 002615 703 LPFHTLWLH-ELEVPAFASLCITSANRHVICCLVD-GHVVALD-SSGSIIWRCR 753 (900)
Q Consensus 703 ~~g~~~w~~-~~~~~~~~s~~~~~~~~~i~~~~~~-g~v~~~d-~~G~~~w~~~ 753 (900)
+...+.. .............+++..+|+.... +.+..+| .+..+.-...
T Consensus 241 --~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 241 --GNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred --ceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence 7776652 2222112234556677888887543 7888888 6666554443
No 406
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=96.86 E-value=0.013 Score=57.73 Aligned_cols=146 Identities=16% Similarity=0.136 Sum_probs=79.8
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEE--EEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECC-CCcEEEE-EecCCce
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLW--EIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYL-TGDIYWT-FQTCGEV 631 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w--~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~-tG~~~w~-~~~~~~~ 631 (900)
+..++++-..|.+...+-..+.+.- +.+.+.--...+.++. +.+.+|.|+.||.+.+||.+ .++.+|+ .+.+..-
T Consensus 133 ~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~G 212 (339)
T KOG0280|consen 133 GTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSG 212 (339)
T ss_pred CceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecc
Confidence 3346666666655544433332221 1112221111233332 33579999999999999988 6778887 3344333
Q ss_pred eeeeeEe-CCCCEEEEecCCCeEEEEECCC-CeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 632 KCQPVVD-APRQLIWCGSHDHNLYALDFRN-YRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 632 ~~~~~~~-~~~~~i~~gs~dg~l~~~d~~~-g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
+++.... +....|++|++|..+..||.++ |+++.....+|.++...-.....+.++++....+....+.+.
T Consensus 213 V~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~ 285 (339)
T KOG0280|consen 213 VVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSD 285 (339)
T ss_pred eEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEecc
Confidence 3332222 2345799999999999999884 566666666555543221111123444444333355555444
No 407
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=96.85 E-value=0.015 Score=59.17 Aligned_cols=150 Identities=16% Similarity=0.145 Sum_probs=94.8
Q ss_pred cccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCC------ceeeceeEecCC-CEEEEEeeCCEEEEEEC
Q 002615 544 CVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEG------RIECSAAVLADF-SQVVVGCYKGKIYFLDY 616 (900)
Q Consensus 544 ~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~------~~~~~~~~~~~~-~~i~vg~~dg~l~~~d~ 616 (900)
.++-||. ..+.+..|...+.|+.|-+.+|. |.+.-.. .++ -...++.. +.+..++-||.|..||.
T Consensus 216 ~LdWSp~-----~~g~LlsGDc~~~I~lw~~~~g~--W~vd~~Pf~gH~~SVE-DLqWSptE~~vfaScS~DgsIrIWDi 287 (440)
T KOG0302|consen 216 GLDWSPI-----KTGRLLSGDCVKGIHLWEPSTGS--WKVDQRPFTGHTKSVE-DLQWSPTEDGVFASCSCDGSIRIWDI 287 (440)
T ss_pred eeecccc-----cccccccCccccceEeeeeccCc--eeecCccccccccchh-hhccCCccCceEEeeecCceEEEEEe
Confidence 3566774 36777777777789999998876 8754221 121 23344433 34555667999999999
Q ss_pred CCCcE---EEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCC---CeEEEeeccCCccccCceeecc-CCEEEEE
Q 002615 617 LTGDI---YWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRN---YRCVYKLPCGGSIFGSPAIDEV-HDVLYVA 689 (900)
Q Consensus 617 ~tG~~---~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~---g~~~w~~~~~~~~~~~~~~~~~-~~~l~v~ 689 (900)
++|.. +.+...++.+. ..-+......|..|+.||++..||+++ ++++-.++.+...+++....+. ...+.++
T Consensus 288 Rs~~~~~~~~~kAh~sDVN-VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaas 366 (440)
T KOG0302|consen 288 RSGPKKAAVSTKAHNSDVN-VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAAS 366 (440)
T ss_pred cCCCccceeEeeccCCcee-eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEec
Confidence 99833 32222222221 122333334688899999999999865 5566666666655555555432 3456677
Q ss_pred eCCCcEEEEEcCC
Q 002615 690 STSGRLTAISVKA 702 (900)
Q Consensus 690 t~~g~l~~~~~~~ 702 (900)
+.+..+..||+..
T Consensus 367 g~D~QitiWDlsv 379 (440)
T KOG0302|consen 367 GEDNQITIWDLSV 379 (440)
T ss_pred cCCCcEEEEEeec
Confidence 7888899998663
No 408
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=96.83 E-value=0.0023 Score=41.58 Aligned_cols=28 Identities=36% Similarity=0.599 Sum_probs=25.6
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEE
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEI 583 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~ 583 (900)
.++.+|+++.+|.|+++|..+|+.+|++
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 4668999999999999999999999985
No 409
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=96.77 E-value=0.18 Score=52.89 Aligned_cols=143 Identities=14% Similarity=0.089 Sum_probs=84.5
Q ss_pred CEEEEEeeCCEEEEEECCCCcE-------EEEEecCCceeeeeeEeCCC-CEEEEecCCCeEEEEECCCC--eEEEeecc
Q 002615 600 SQVVVGCYKGKIYFLDYLTGDI-------YWTFQTCGEVKCQPVVDAPR-QLIWCGSHDHNLYALDFRNY--RCVYKLPC 669 (900)
Q Consensus 600 ~~i~vg~~dg~l~~~d~~tG~~-------~w~~~~~~~~~~~~~~~~~~-~~i~~gs~dg~l~~~d~~~g--~~~w~~~~ 669 (900)
+.+..++.|+.+..||...... .-.+..+..+.--..+.... ..+-..+.|+.|..||.+++ ++......
T Consensus 191 g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~a 270 (422)
T KOG0264|consen 191 GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKA 270 (422)
T ss_pred eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccc
Confidence 5788889999999999764322 12233333333222233222 33344577899999999852 33333333
Q ss_pred CCccccCceeecc-CCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEE-EEeecCcEEEEC
Q 002615 670 GGSIFGSPAIDEV-HDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVI-CCLVDGHVVALD 743 (900)
Q Consensus 670 ~~~~~~~~~~~~~-~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~-~~~~~g~v~~~d 743 (900)
+..-..+..+.+- +..|..|+.+++|..||+++.. +.+.....+.........++....++ +++.|+++.++|
T Consensus 271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~-~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWD 345 (422)
T KOG0264|consen 271 HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN-KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWD 345 (422)
T ss_pred cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc-cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEe
Confidence 3333333334332 3456667789999999998732 34555555555555555556655554 455789999999
No 410
>KOG2103 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.04 Score=62.00 Aligned_cols=119 Identities=9% Similarity=0.156 Sum_probs=75.1
Q ss_pred ccccccccccccceEEeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceee-ceeEecCCCEEEEEeeCCEEEEEE
Q 002615 537 WKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIEC-SAAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 537 W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~-~~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
|+...-+....+.+. ......++++.+..|.+..+|+.||++.|+...+..... ...+. -++......++.||
T Consensus 28 wr~~~vG~~k~~~~~-~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~~~~~~~~-----~~iS~dg~~lr~wn 101 (910)
T KOG2103|consen 28 WRQQLVGVKKVNFLV-YDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTSGLGVPLT-----NTISVDGRYLRSWN 101 (910)
T ss_pred hhhhcccceeEEEEe-ecCCCceEEEEeccchhheecccCCcEEEEEeccCCCcccCccee-----EEEccCCcEEEeec
Confidence 776654433333333 445678999999999999999999999999876643211 11111 13333334689999
Q ss_pred CCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 616 YLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 616 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
..+|...|........... .+....+..+.+. +..+.|+..|+...
T Consensus 102 ~~~g~l~~~i~l~~g~~~~-~~~v~~~i~v~~g-------~~~~~g~l~w~~~~ 147 (910)
T KOG2103|consen 102 TNNGILDWEIELADGFKGL-LLEVNKGIAVLNG-------HTRKFGELKWVESF 147 (910)
T ss_pred CCCceeeeeccccccccee-EEEEccceEEEcc-------eeccccceeehhhc
Confidence 9999999998876653222 2222233333322 45567888887654
No 411
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.71 E-value=0.012 Score=63.64 Aligned_cols=188 Identities=13% Similarity=0.054 Sum_probs=108.5
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEE-------EEecCCceeeceeEec-CCCEEEEEeeCCEEEEEECCCCcEEEEEec
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLW-------EIKLEGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYLTGDIYWTFQT 627 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w-------~~~~~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~ 627 (900)
+..++.+++.+|.|..|-...+-.-- .+..+..-.++.-+.+ ..+.+.+.+||-+|..||+.+++..-++..
T Consensus 639 D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g 718 (1012)
T KOG1445|consen 639 DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG 718 (1012)
T ss_pred ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc
Confidence 46688899999988888765542211 1112221112222222 123567789999999999999998877776
Q ss_pred CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE-EEeeccCCccc-cCceeeccCCEEEEEeC----CCcEEEEEcC
Q 002615 628 CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC-VYKLPCGGSIF-GSPAIDEVHDVLYVAST----SGRLTAISVK 701 (900)
Q Consensus 628 ~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~-~w~~~~~~~~~-~~~~~~~~~~~l~v~t~----~g~l~~~~~~ 701 (900)
+..-.-..++++++..+.+.+.||.|++|++.+++. ++.-+...... +-....-++..+++... ...+..||.+
T Consensus 719 HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq 798 (1012)
T KOG1445|consen 719 HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQ 798 (1012)
T ss_pred CcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhh
Confidence 665556667888888899999999999999988753 33222111111 11111112244444332 3456677777
Q ss_pred CCCceeeeEeecCC-cceeeeeeeeCCCEEEEEe-ecCcEEEEC
Q 002615 702 ALPFHTLWLHELEV-PAFASLCITSANRHVICCL-VDGHVVALD 743 (900)
Q Consensus 702 ~~~g~~~w~~~~~~-~~~~s~~~~~~~~~i~~~~-~~g~v~~~d 743 (900)
+..+..+....... +...-+....+.+.+++.+ .|..|++|.
T Consensus 799 ~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yE 842 (1012)
T KOG1445|consen 799 TLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYE 842 (1012)
T ss_pred hccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEE
Confidence 65556665544321 1112233344455555544 355677775
No 412
>PRK12449 acyl carrier protein; Provisional
Probab=96.70 E-value=0.0044 Score=50.38 Aligned_cols=66 Identities=9% Similarity=0.098 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHhcccCC--cccccCCCcc-ccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 359 SDLLQVIRKAFGHALMV--EEVLHHDNFF-TMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~--~~i~~~~~Ff-~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
+++.+.+++++++.++. ..+..+.+|. ++|-||+..+.|...+ .++...+.+.+|+..++.+|..+
T Consensus 4 ~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~~ 78 (80)
T PRK12449 4 EEIFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQR 78 (80)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 46778888999988876 4688899995 9999999999987654 36777899999999999999764
No 413
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=96.69 E-value=0.066 Score=59.35 Aligned_cols=109 Identities=16% Similarity=0.260 Sum_probs=70.7
Q ss_pred eEecCCCEEEEEeeCCEEEEEECCCCcEEEEEe-cCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC---eEEEeecc
Q 002615 594 AVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQ-TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY---RCVYKLPC 669 (900)
Q Consensus 594 ~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g---~~~w~~~~ 669 (900)
+++..++++.+|+..|.||.|+-..|+.+.... ....+.+...+.+...++.+|+..|.|..+-...+ .......+
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~ 119 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPC 119 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccc
Confidence 556666789999999999999977776543322 12334445555666667777888777766644432 22222222
Q ss_pred C---CccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 670 G---GSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 670 ~---~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
+ +...+....+.++-.+|.|...|.|.+..++.
T Consensus 120 d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 120 DKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 2 33445555666677899999999998877664
No 414
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.68 E-value=0.37 Score=52.99 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=95.4
Q ss_pred ceeEecCCCEE-EEEeeC---CEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEE-EEecCCC--eEEEEECCCCeEE
Q 002615 592 SAAVLADFSQV-VVGCYK---GKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLI-WCGSHDH--NLYALDFRNYRCV 664 (900)
Q Consensus 592 ~~~~~~~~~~i-~vg~~d---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i-~~gs~dg--~l~~~d~~~g~~~ 664 (900)
.+..++++..+ |+.-+. ..+|.+|..+|+..-.....+ ....|.+.+++..| ++...|| .||.+|..++. +
T Consensus 197 ~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g-~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~ 274 (425)
T COG0823 197 TPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG-NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-L 274 (425)
T ss_pred ccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC-ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-c
Confidence 45566655443 232222 358999999887655444333 33445666665554 4445454 48999988776 5
Q ss_pred EeeccCCccccCceeeccCCEEEEEeCCC---cEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeec-Cc--
Q 002615 665 YKLPCGGSIFGSPAIDEVHDVLYVASTSG---RLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVD-GH-- 738 (900)
Q Consensus 665 w~~~~~~~~~~~~~~~~~~~~l~v~t~~g---~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~-g~-- 738 (900)
++......+...|.+.+++..|++.+..+ .|+.+|.+. +..-++.........+.+.++++.+...+.. |.
T Consensus 275 ~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g---~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~ 351 (425)
T COG0823 275 PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG---SQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWD 351 (425)
T ss_pred eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC---CceeEeeccCCCCcCccCCCCCCEEEEEeccCCcee
Confidence 56555556666888888888888777543 577777774 4334444443333466777788877776643 33
Q ss_pred EEEEC-CCCCEEeeecCC
Q 002615 739 VVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 739 v~~~d-~~G~~~w~~~~~ 755 (900)
+..+| .+|.. |+.-..
T Consensus 352 i~~~~~~~~~~-~~~lt~ 368 (425)
T COG0823 352 IDKNDLASGGK-IRILTS 368 (425)
T ss_pred eEEeccCCCCc-EEEccc
Confidence 66666 55543 554433
No 415
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.67 E-value=0.074 Score=61.59 Aligned_cols=205 Identities=14% Similarity=0.212 Sum_probs=107.7
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEeeccCCc---cccCceeecc--CCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 641 RQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS---IFGSPAIDEV--HDVLYVASTSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 641 ~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~---~~~~~~~~~~--~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
...++++.....+..||-+.++++-.|+.+.. ..+...+.+. ...+++++.||.|..|+. ....|. .
T Consensus 1076 ~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~----y~~~~~----~ 1147 (1387)
T KOG1517|consen 1076 EPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKD----YADKWK----K 1147 (1387)
T ss_pred CceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecc----cccccC----C
Confidence 34566666566788999888888877766532 2233333221 235788888998888762 223331 1
Q ss_pred cceeeeeeeeCCCEEEEEeecCcEEEECCCCCE-EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeE
Q 002615 716 PAFASLCITSANRHVICCLVDGHVVALDSSGSI-IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWE 794 (900)
Q Consensus 716 ~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~-~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~ 794 (900)
+...+ +...-.+.+.... .+|-+ -|+. ..|.+++++.-..|..||....++.-.
T Consensus 1148 ~eLVT-aw~~Ls~~~~~~r---------~~~~v~dWqQ---------------~~G~Ll~tGd~r~IRIWDa~~E~~~~d 1202 (1387)
T KOG1517|consen 1148 PELVT-AWSSLSDQLPGAR---------GTGLVVDWQQ---------------QSGHLLVTGDVRSIRIWDAHKEQVVAD 1202 (1387)
T ss_pred ceeEE-eeccccccCccCC---------CCCeeeehhh---------------hCCeEEecCCeeEEEEEecccceeEee
Confidence 10000 0000001111100 11211 1322 234566665556789999887666655
Q ss_pred EecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeeccCCccccCceee
Q 002615 795 YSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLELQGDIFSSPVMI 874 (900)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ss~~~~ 874 (900)
+..++....+... .....++.+++|..||.|++||.+.... +..+..+....-...++.--+-.
T Consensus 1203 iP~~s~t~vTaLS---------~~~~~gn~i~AGfaDGsvRvyD~R~a~~-------ds~v~~~R~h~~~~~Iv~~slq~ 1266 (1387)
T KOG1517|consen 1203 IPYGSSTLVTALS---------ADLVHGNIIAAGFADGSVRVYDRRMAPP-------DSLVCVYREHNDVEPIVHLSLQR 1266 (1387)
T ss_pred cccCCCccceeec---------ccccCCceEEEeecCCceEEeecccCCc-------cccceeecccCCcccceeEEeec
Confidence 5444322111111 1223378999999999999999875421 12222222221111111110111
Q ss_pred --CCEEEEeeeCCeEEEEEccc
Q 002615 875 --GGRVFVGCRDDYIYCIALET 894 (900)
Q Consensus 875 --~~~l~vg~~dg~l~~ld~~t 894 (900)
-++|+.||.+|-++.||+..
T Consensus 1267 ~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1267 QGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred CCCcceeeeccCCeEEEEeccc
Confidence 24799999999999999876
No 416
>TIGR00517 acyl_carrier acyl carrier protein. S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.
Probab=96.64 E-value=0.0054 Score=49.40 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHhcccCCc--ccccCCCcc-ccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 359 SDLLQVIRKAFGHALMVE--EVLHHDNFF-TMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~~--~i~~~~~Ff-~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
+++.+.+++++++.++.+ .+..+.+|+ ++|.|||..+.|...+ .++...+...+|+..++.++.++
T Consensus 2 ~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~~ 76 (77)
T TIGR00517 2 QEIFEKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEEN 76 (77)
T ss_pred hHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHhc
Confidence 356778888888888774 588888986 6999999999987654 36677889999999999998753
No 417
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.62 E-value=0.19 Score=52.05 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=52.8
Q ss_pred ceeEecC-CCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCC
Q 002615 592 SAAVLAD-FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRN 660 (900)
Q Consensus 592 ~~~~~~~-~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~ 660 (900)
...+++. .+.+.+++.+..|..+|.++-...-.+..+..+.++.---++...||.|..+|.|+.||...
T Consensus 198 dlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 198 DLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred hhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 4455554 34688888899999999999888877777766665543334567899999999999999865
No 418
>PRK05883 acyl carrier protein; Validated
Probab=96.60 E-value=0.0076 Score=49.94 Aligned_cols=70 Identities=19% Similarity=0.174 Sum_probs=58.1
Q ss_pred ccchHHHHHHHHHHhcccCC--cccccCCCcc-ccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 356 TKASDLLQVIRKAFGHALMV--EEVLHHDNFF-TMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 356 ~~~~~~~~~~~~~~~~~l~~--~~i~~~~~Ff-~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
...+++.+.+.+++++.|++ ..|..+++|+ ++|-|||..+.+...| +++...+...+|+..|..++..+.
T Consensus 10 ~~~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~~~ 88 (91)
T PRK05883 10 SSPSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAAKV 88 (91)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHc
Confidence 34567889999999999987 4688999995 7999999988876544 477788999999999999998754
No 419
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.59 E-value=0.77 Score=47.80 Aligned_cols=223 Identities=14% Similarity=0.136 Sum_probs=106.7
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEE----------
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTF---------- 625 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~---------- 625 (900)
.+..|++|+.+| |+.++.... ..|.......-.....+.++-+.+++-+ |+.|+.++..+-...-..
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~-~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDP-SKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCC-ccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence 578999999998 999998322 2232222211123445555555555554 688999987654332210
Q ss_pred ---ecC--Cceeeee--eEeCCCCEEEEecCCCeEEEEECCC--C---eEEEeeccCCccccCceeeccCCEEEEEeCCC
Q 002615 626 ---QTC--GEVKCQP--VVDAPRQLIWCGSHDHNLYALDFRN--Y---RCVYKLPCGGSIFGSPAIDEVHDVLYVASTSG 693 (900)
Q Consensus 626 ---~~~--~~~~~~~--~~~~~~~~i~~gs~dg~l~~~d~~~--g---~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g 693 (900)
... ..+.... ........+.++. ...+..|.... . +....+.....+.+. ... ++.+++|+.++
T Consensus 83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i-~~~--~~~i~v~~~~~ 158 (275)
T PF00780_consen 83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEISLPDPPSSI-AFL--GNKICVGTSKG 158 (275)
T ss_pred ccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEEcCCCcEEE-EEe--CCEEEEEeCCc
Confidence 111 1111111 0011122233333 33544443322 1 344445555433332 222 48899998665
Q ss_pred cEEEEEcCCCCceeeeEeecCCcc---------eeee-eeeeCCCEEEEEeecCcEEEECCCCC------EEeeecCCCc
Q 002615 694 RLTAISVKALPFHTLWLHELEVPA---------FASL-CITSANRHVICCLVDGHVVALDSSGS------IIWRCRTGGP 757 (900)
Q Consensus 694 ~l~~~~~~~~~g~~~w~~~~~~~~---------~~s~-~~~~~~~~i~~~~~~g~v~~~d~~G~------~~w~~~~~~~ 757 (900)
...+|+++ +....-....... ...+ .+...++.+.++. +..-..+|.+|+ +.|......-
T Consensus 159 -f~~idl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~-~~~g~fv~~~G~~~r~~~i~W~~~p~~~ 234 (275)
T PF00780_consen 159 -FYLIDLNT--GSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCY-DNIGVFVNKNGEPSRKSTIQWSSAPQSV 234 (275)
T ss_pred -eEEEecCC--CCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEe-cceEEEEcCCCCcCcccEEEcCCchhEE
Confidence 88889886 5443332221111 0011 1122223444443 333334454453 2343321111
Q ss_pred eeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecC
Q 002615 758 IFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVG 798 (900)
Q Consensus 758 ~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~ 798 (900)
.+ ....|++.. ++.+..++..+|+++-.+...
T Consensus 235 ~~--------~~pyli~~~-~~~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 235 AY--------SSPYLIAFS-SNSIEVRSLETGELVQTIPLP 266 (275)
T ss_pred EE--------ECCEEEEEC-CCEEEEEECcCCcEEEEEECC
Confidence 11 123455544 456999999999987766544
No 420
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=96.58 E-value=0.1 Score=58.84 Aligned_cols=142 Identities=18% Similarity=0.259 Sum_probs=80.9
Q ss_pred CCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCce---eeeeeEeCCCC
Q 002615 566 SHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV---KCQPVVDAPRQ 642 (900)
Q Consensus 566 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~~~~ 642 (900)
.+..+++|.+ |.++|...............++| .+++++. ..++.+| -.|+++|.+..+... .......++++
T Consensus 127 ~~~~~~iD~~-G~Vrw~~~~~~~~~~~~~~l~nG-~ll~~~~-~~~~e~D-~~G~v~~~~~l~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 127 SSYTYLIDNN-GDVRWYLPLDSGSDNSFKQLPNG-NLLIGSG-NRLYEID-LLGKVIWEYDLPGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp EEEEEEEETT-S-EEEEE-GGGT--SSEEE-TTS--EEEEEB-TEEEEE--TT--EEEEEE--TTEE-B-S-EEE-TTS-
T ss_pred CceEEEECCC-ccEEEEEccCccccceeeEcCCC-CEEEecC-CceEEEc-CCCCEEEeeecCCcccccccccEECCCCC
Confidence 5679999975 99999988765432223445554 5555554 7899999 579999998887643 22233344555
Q ss_pred EEEEecC-------------CCeEEEEECCCCeEEEeeccCCcc---------------------------ccCceeecc
Q 002615 643 LIWCGSH-------------DHNLYALDFRNYRCVYKLPCGGSI---------------------------FGSPAIDEV 682 (900)
Q Consensus 643 ~i~~gs~-------------dg~l~~~d~~~g~~~w~~~~~~~~---------------------------~~~~~~~~~ 682 (900)
.|+.+.. ...|..+| .+|+++|.+++.... ..+...++.
T Consensus 203 ~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~ 281 (477)
T PF05935_consen 203 LLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPS 281 (477)
T ss_dssp EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETT
T ss_pred EEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCC
Confidence 5555541 34689999 999999987652110 112234444
Q ss_pred CCEEEEEeCCC-cEEEEEcCCCCceeeeEeecC
Q 002615 683 HDVLYVASTSG-RLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 683 ~~~l~v~t~~g-~l~~~~~~~~~g~~~w~~~~~ 714 (900)
++.|++.+... .|..+|.++ +++.|....+
T Consensus 282 dd~iivSsR~~s~V~~Id~~t--~~i~Wilg~~ 312 (477)
T PF05935_consen 282 DDSIIVSSRHQSAVIKIDYRT--GKIKWILGPP 312 (477)
T ss_dssp TTEEEEEETTT-EEEEEE-TT--S-EEEEES-S
T ss_pred CCeEEEEcCcceEEEEEECCC--CcEEEEeCCC
Confidence 67788877644 789999777 9999988654
No 421
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=96.58 E-value=0.16 Score=51.97 Aligned_cols=150 Identities=7% Similarity=0.015 Sum_probs=89.2
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCC------cEEEEEec-CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEE
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTG------DIYWTFQT-CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCV 664 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG------~~~w~~~~-~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~ 664 (900)
...++.++.+++.|..|-.+..|+.+.- +++-.... +....-+..+...+..+|.|..++++..-|.++.+.+
T Consensus 61 AlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi 140 (609)
T KOG4227|consen 61 ALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSI 140 (609)
T ss_pred eeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceee
Confidence 3456677778888888888888875421 22211111 1122334556666778999999999999999999988
Q ss_pred EeeccCC---ccccCceeeccCCEEEEEeCCCcEEEEEcCCCC--ceeeeEeecCCcceeeeeeeeC-CCEEEEEeecCc
Q 002615 665 YKLPCGG---SIFGSPAIDEVHDVLYVASTSGRLTAISVKALP--FHTLWLHELEVPAFASLCITSA-NRHVICCLVDGH 738 (900)
Q Consensus 665 w~~~~~~---~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~--g~~~w~~~~~~~~~~s~~~~~~-~~~i~~~~~~g~ 738 (900)
..+.... .++.- ...+.++.+.+.|.+|.+..||..... ++++--.. ....|.+..+.+. ...+.+.+..++
T Consensus 141 ~V~~~~~~~~~VY~m-~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN-~~~~F~t~~F~P~~P~Li~~~~~~~G 218 (609)
T KOG4227|consen 141 YVANENNNRGDVYHM-DQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPAN-SGKNFYTAEFHPETPALILVNSETGG 218 (609)
T ss_pred eeecccCcccceeec-ccCCCCceEEEEecCceEEEEeccCCCCCCceeeecC-CCccceeeeecCCCceeEEeccccCC
Confidence 8775532 33321 122235788889999999999976421 22222111 1222333333332 234455555666
Q ss_pred EEEEC
Q 002615 739 VVALD 743 (900)
Q Consensus 739 v~~~d 743 (900)
+.+||
T Consensus 219 ~~~~D 223 (609)
T KOG4227|consen 219 PNVFD 223 (609)
T ss_pred CCcee
Confidence 77776
No 422
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=96.58 E-value=0.2 Score=56.49 Aligned_cols=145 Identities=16% Similarity=0.232 Sum_probs=80.4
Q ss_pred CCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc---eeeeeeee
Q 002615 649 HDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA---FASLCITS 725 (900)
Q Consensus 649 ~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~---~~s~~~~~ 725 (900)
.....+.+| .+|.++|............... .++.+++++. ..++.+|.. |+.+|.+...... .......+
T Consensus 126 ~~~~~~~iD-~~G~Vrw~~~~~~~~~~~~~~l-~nG~ll~~~~-~~~~e~D~~---G~v~~~~~l~~~~~~~HHD~~~l~ 199 (477)
T PF05935_consen 126 SSSYTYLID-NNGDVRWYLPLDSGSDNSFKQL-PNGNLLIGSG-NRLYEIDLL---GKVIWEYDLPGGYYDFHHDIDELP 199 (477)
T ss_dssp BEEEEEEEE-TTS-EEEEE-GGGT--SSEEE--TTS-EEEEEB-TEEEEE-TT-----EEEEEE--TTEE-B-S-EEE-T
T ss_pred CCceEEEEC-CCccEEEEEccCccccceeeEc-CCCCEEEecC-CceEEEcCC---CCEEEeeecCCcccccccccEECC
Confidence 356789999 6799999987654332221222 3577777775 679999976 8999998887643 34445555
Q ss_pred CCCEEEEEee-------------cCcEEEECCCCCEEeeecCCCce---ec--------------c--------cccc-c
Q 002615 726 ANRHVICCLV-------------DGHVVALDSSGSIIWRCRTGGPI---FA--------------G--------PCTS-F 766 (900)
Q Consensus 726 ~~~~i~~~~~-------------~g~v~~~d~~G~~~w~~~~~~~~---~~--------------~--------~~~~-~ 766 (900)
+++.++.+.. ...|.-+|.+|+++|........ .. . ..+. .
T Consensus 200 nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd 279 (477)
T PF05935_consen 200 NGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYD 279 (477)
T ss_dssp TS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEE
T ss_pred CCCEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEe
Confidence 5666666652 33577788899999875522111 00 0 0011 1
Q ss_pred cCCCeEEEEeeCC-eEEEEeCCCCceeeEEecCC
Q 002615 767 ALPSQVLICSRNG-SIYSFEQESGNLLWEYSVGD 799 (900)
Q Consensus 767 ~~~~~l~~g~~dg-~l~~~d~~tG~~~w~~~~~~ 799 (900)
..++.|++.++.. .|..+|..+|++.|.+..+.
T Consensus 280 ~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 280 PSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp TTTTEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred CCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 2367788887755 89999999999999886544
No 423
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=96.57 E-value=0.91 Score=45.77 Aligned_cols=171 Identities=15% Similarity=0.160 Sum_probs=106.8
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECC-CCcEEEEEecCCceeeeeeEeC--CCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYL-TGDIYWTFQTCGEVKCQPVVDA--PRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~--~~~~ 643 (900)
..|..||-...+++-++.....+. ++.+..+ .|++-- .+.||.|... +-+.+..+++....+....+.+ ....
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I~-~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~ 150 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEIK-AVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSL 150 (346)
T ss_pred ceEEEEecccCcEEEEEEecccee-eEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceE
Confidence 358889866677776666665553 3445444 555553 6679999876 4566666655332222222222 1223
Q ss_pred EEE-ecCCCeEEEEECCCCeEE--EeeccCCccccCceeeccCCEEEEEeCCCcEE-EEEcCCCCceeeeEeecCCcc--
Q 002615 644 IWC-GSHDHNLYALDFRNYRCV--YKLPCGGSIFGSPAIDEVHDVLYVASTSGRLT-AISVKALPFHTLWLHELEVPA-- 717 (900)
Q Consensus 644 i~~-gs~dg~l~~~d~~~g~~~--w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~-~~~~~~~~g~~~w~~~~~~~~-- 717 (900)
|.+ |-.-|.|...|+..-+.- -.+..+...++...+...+..|..++..|++. .||..+ |+.+.....+...
T Consensus 151 LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~--g~~l~E~RRG~d~A~ 228 (346)
T KOG2111|consen 151 LAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTED--GTLLQELRRGVDRAD 228 (346)
T ss_pred EEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCC--CcEeeeeecCCchhe
Confidence 333 555688888887654431 23444555666667766566777788888765 578776 8888877655432
Q ss_pred eeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 718 FASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 718 ~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
....++.++...+.+++..|+++.|.
T Consensus 229 iy~iaFSp~~s~LavsSdKgTlHiF~ 254 (346)
T KOG2111|consen 229 IYCIAFSPNSSWLAVSSDKGTLHIFS 254 (346)
T ss_pred EEEEEeCCCccEEEEEcCCCeEEEEE
Confidence 34566777777888888899999886
No 424
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.56 E-value=0.006 Score=45.87 Aligned_cols=50 Identities=24% Similarity=0.255 Sum_probs=42.6
Q ss_pred CcccccCCCccccCcchHHHHHHHHHh-----CCCchhhhcCCCHHHHHHHHHhh
Q 002615 375 VEEVLHHDNFFTMGGNSIAAAHVAHNL-----GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 375 ~~~i~~~~~Ff~lGgdSl~a~~l~~~l-----~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
.+++.+++|....|.|||.+|+|..++ .+++..++++||+..--..+...
T Consensus 15 ~~~l~dqeNLi~~GLDSiR~M~L~~~wR~~G~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 15 VEELDDQENLIDYGLDSIRMMALLERWRKRGADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred hhhcCchhhHHHhchhHHHHHHHHHHHHHcCCcccHHHHHhCccHHHHHHHHHhc
Confidence 356888899999999999999998876 48888999999999877776654
No 425
>PHA02713 hypothetical protein; Provisional
Probab=96.47 E-value=0.17 Score=58.23 Aligned_cols=210 Identities=9% Similarity=0.120 Sum_probs=100.2
Q ss_pred eEEEEECCCCcEEEEEec--CCceeeceeEecCCCEEEE-EeeC------CEEEEEECCCCcEEEEEecC--Cce-eeee
Q 002615 568 KFICADAKRSSVLWEIKL--EGRIECSAAVLADFSQVVV-GCYK------GKIYFLDYLTGDIYWTFQTC--GEV-KCQP 635 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~~~~~i~v-g~~d------g~l~~~d~~tG~~~w~~~~~--~~~-~~~~ 635 (900)
.+.+||+.+++ |..-. +.......+..-+ +.||+ |+.+ ..+++||+.+++ |..-.+ ... ....
T Consensus 273 ~v~~yd~~~~~--W~~l~~mp~~r~~~~~a~l~-~~IYviGG~~~~~~~~~~v~~Yd~~~n~--W~~~~~m~~~R~~~~~ 347 (557)
T PHA02713 273 CILVYNINTME--YSVISTIPNHIINYASAIVD-NEIIIAGGYNFNNPSLNKVYKINIENKI--HVELPPMIKNRCRFSL 347 (557)
T ss_pred CEEEEeCCCCe--EEECCCCCccccceEEEEEC-CEEEEEcCCCCCCCccceEEEEECCCCe--EeeCCCCcchhhceeE
Confidence 57899998876 76422 2211111222233 34554 4432 358899988763 753211 111 1112
Q ss_pred eEeCCCCEEEE-ecCCC-----eEEEEECCCCeEEEeecc--CCccccCceeeccCCEEEEE-eCC--------------
Q 002615 636 VVDAPRQLIWC-GSHDH-----NLYALDFRNYRCVYKLPC--GGSIFGSPAIDEVHDVLYVA-STS-------------- 692 (900)
Q Consensus 636 ~~~~~~~~i~~-gs~dg-----~l~~~d~~~g~~~w~~~~--~~~~~~~~~~~~~~~~l~v~-t~~-------------- 692 (900)
+.. ++.||+ |+.++ .+.+||+.+. .|..-. ........+..- ++.||+- +.+
T Consensus 348 ~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~~r~~~~~~~~-~g~IYviGG~~~~~~~~~~~~~~~~ 422 (557)
T PHA02713 348 AVI--DDTIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPIALSSYGMCVL-DQYIYIIGGRTEHIDYTSVHHMNSI 422 (557)
T ss_pred EEE--CCEEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCcccccccEEEE-CCEEEEEeCCCcccccccccccccc
Confidence 222 356665 55443 4889998875 476532 111111111121 3777763 322
Q ss_pred ---------CcEEEEEcCCCCceeeeEeecCCcc-eeeeeeeeCCCEEEEE-eec------CcEEEEC-CCCCEEeeecC
Q 002615 693 ---------GRLTAISVKALPFHTLWLHELEVPA-FASLCITSANRHVICC-LVD------GHVVALD-SSGSIIWRCRT 754 (900)
Q Consensus 693 ---------g~l~~~~~~~~~g~~~w~~~~~~~~-~~s~~~~~~~~~i~~~-~~~------g~v~~~d-~~G~~~w~~~~ 754 (900)
..+.+||+.+ -.|+.-..-+. ........-++.||+. +.+ ..+.+|| .+ .-.|+.-.
T Consensus 423 ~~~~~~~~~~~ve~YDP~t----d~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~-~~~W~~~~ 497 (557)
T PHA02713 423 DMEEDTHSSNKVIRYDTVN----NIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT-YNGWELIT 497 (557)
T ss_pred cccccccccceEEEECCCC----CeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC-CCCeeEcc
Confidence 2477888775 36765332211 1122233345666654 332 2357888 44 11376432
Q ss_pred CCceeccccccccCCCeEEEE-eeCC--eEEEEeCCCCceeeE
Q 002615 755 GGPIFAGPCTSFALPSQVLIC-SRNG--SIYSFEQESGNLLWE 794 (900)
Q Consensus 755 ~~~~~~~~~~~~~~~~~l~~g-~~dg--~l~~~d~~tG~~~w~ 794 (900)
.-+.--..+-....++.||+. +.+| .+.+||+.+. .|+
T Consensus 498 ~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~--~W~ 538 (557)
T PHA02713 498 TTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTY--EWN 538 (557)
T ss_pred ccCcccccceeEEECCEEEEEeeecceeehhhcCcccc--ccc
Confidence 211100111112235666654 4565 6788888765 465
No 426
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=96.46 E-value=0.0049 Score=40.02 Aligned_cols=28 Identities=29% Similarity=0.827 Sum_probs=25.5
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCceeeEE
Q 002615 768 LPSQVLICSRNGSIYSFEQESGNLLWEY 795 (900)
Q Consensus 768 ~~~~l~~g~~dg~l~~~d~~tG~~~w~~ 795 (900)
.++.+|+++.+|.++++|.++|+.+|++
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 3568999999999999999999999985
No 427
>PRK05828 acyl carrier protein; Validated
Probab=96.43 E-value=0.0098 Score=48.23 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhc-cc--CCcccccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 359 SDLLQVIRKAFGH-AL--MVEEVLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 359 ~~~~~~~~~~~~~-~l--~~~~i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
.++.+.++++.++ .+ ..+.+..+.+|.+||.|||..+.|...| +++-..+....|+..+..++....
T Consensus 4 ~eI~~~i~~ii~e~~~~~~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~~ 79 (84)
T PRK05828 4 MEILLKIKEIAKKKNFAVTLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKELK 79 (84)
T ss_pred HHHHHHHHHHHHHhccCCCcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 5677888888886 33 4577888899999999999999987654 356667889999999999987654
No 428
>PRK07081 acyl carrier protein; Provisional
Probab=96.40 E-value=0.0079 Score=48.96 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=47.8
Q ss_pred HHHHHHHhccc--CC--cccccCCCccccCcchHHHHHHHHHh----C--CCchhhhc--CCCHHHHHHHHHhhcC
Q 002615 363 QVIRKAFGHAL--MV--EEVLHHDNFFTMGGNSIAAAHVAHNL----G--IDMRLIYN--FPTPSKLEIALLEKKG 426 (900)
Q Consensus 363 ~~~~~~~~~~l--~~--~~i~~~~~Ff~lGgdSl~a~~l~~~l----~--~~~~~~~~--~~t~~~l~~~l~~~~~ 426 (900)
+.++++..+.+ +. +.+..+.+|+++|-|||.+++|...| + ++...+.. ++|+..|+.++.....
T Consensus 3 ~~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~~ 78 (83)
T PRK07081 3 NTIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQD 78 (83)
T ss_pred HHHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHHh
Confidence 45566666653 22 46889999999999999999998755 3 55555543 8999999999987653
No 429
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=96.35 E-value=0.019 Score=64.40 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=74.3
Q ss_pred eeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
+...+.+|+.|+.|-.+..|...|+.++-....+..-..-..+..++-.+.++++|..|.+|.+.+|.++-....+...+
T Consensus 198 fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgav 277 (1113)
T KOG0644|consen 198 FDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAV 277 (1113)
T ss_pred eccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccce
Confidence 34456789999999999999999998887766655434445565565567788889999999999998876555555444
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECC
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFR 659 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~ 659 (900)
++..+.+-. ..+.||++..||..
T Consensus 278 taiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 278 TAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred eeeccCccc----cCCCCCceEecccc
Confidence 555555421 45678889888865
No 430
>PRK07117 acyl carrier protein; Validated
Probab=96.32 E-value=0.012 Score=47.06 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHhccc-CC--cccccCCCccccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 359 SDLLQVIRKAFGHAL-MV--EEVLHHDNFFTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l-~~--~~i~~~~~Ff~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
+++.+.++++..+.+ ++ .+|..+.+|.+||.|||..+.+...+ +++-..+-+-.|+..+..++..+
T Consensus 4 ~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~~ 78 (79)
T PRK07117 4 QRIFDILVRHIREVLPDLDQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYAK 78 (79)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHHh
Confidence 467788999999998 46 46999999999999999999987643 46667788889999999988753
No 431
>PHA02713 hypothetical protein; Provisional
Probab=96.26 E-value=0.28 Score=56.57 Aligned_cols=131 Identities=14% Similarity=0.202 Sum_probs=63.3
Q ss_pred eEEEEECCCCeEEEeeccC--Ccc-ccCceeeccCCEEEE-EeCCC-----cEEEEEcCCCCceeeeEeecCCcce-eee
Q 002615 652 NLYALDFRNYRCVYKLPCG--GSI-FGSPAIDEVHDVLYV-ASTSG-----RLTAISVKALPFHTLWLHELEVPAF-ASL 721 (900)
Q Consensus 652 ~l~~~d~~~g~~~w~~~~~--~~~-~~~~~~~~~~~~l~v-~t~~g-----~l~~~~~~~~~g~~~w~~~~~~~~~-~s~ 721 (900)
.+++||+.+.+ |..-.. .+. ..+.+.. ++.||+ |+.++ .+.+||+.+ ..|+.-..-+.. ...
T Consensus 321 ~v~~Yd~~~n~--W~~~~~m~~~R~~~~~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~----~~W~~~~~mp~~r~~~ 392 (557)
T PHA02713 321 KVYKINIENKI--HVELPPMIKNRCRFSLAVI--DDTIYAIGGQNGTNVERTIECYTMGD----DKWKMLPDMPIALSSY 392 (557)
T ss_pred eEEEEECCCCe--EeeCCCCcchhhceeEEEE--CCEEEEECCcCCCCCCceEEEEECCC----CeEEECCCCCcccccc
Confidence 48899988764 643221 111 1112222 367766 43332 377888775 368763332211 111
Q ss_pred eeeeCCCEEEE-Eeec-----------------------CcEEEEC-CCCCEEeeecCCCcee-ccccccccCCCeEEEE
Q 002615 722 CITSANRHVIC-CLVD-----------------------GHVVALD-SSGSIIWRCRTGGPIF-AGPCTSFALPSQVLIC 775 (900)
Q Consensus 722 ~~~~~~~~i~~-~~~~-----------------------g~v~~~d-~~G~~~w~~~~~~~~~-~~~~~~~~~~~~l~~g 775 (900)
.....++.+|+ |+.+ ..+.+|| .+. .|+.-..-+.. ..++ ....++.||+.
T Consensus 393 ~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m~~~r~~~~-~~~~~~~IYv~ 469 (557)
T PHA02713 393 GMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNFWTGTIRPG-VVSHKDDIYVV 469 (557)
T ss_pred cEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCCCcccccCc-EEEECCEEEEE
Confidence 22233566665 4332 2477788 443 47643221111 1111 12335677775
Q ss_pred e-eC------CeEEEEeCCC-CceeeEE
Q 002615 776 S-RN------GSIYSFEQES-GNLLWEY 795 (900)
Q Consensus 776 ~-~d------g~l~~~d~~t-G~~~w~~ 795 (900)
+ .+ ..+.+||+++ . .|+.
T Consensus 470 GG~~~~~~~~~~ve~Ydp~~~~--~W~~ 495 (557)
T PHA02713 470 CDIKDEKNVKTCIFRYNTNTYN--GWEL 495 (557)
T ss_pred eCCCCCCccceeEEEecCCCCC--CeeE
Confidence 3 22 2468899886 4 4764
No 432
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=96.22 E-value=0.27 Score=51.34 Aligned_cols=145 Identities=17% Similarity=0.140 Sum_probs=81.8
Q ss_pred CCeEEEEECCCCcEEEEEecCCce---------------------------eeceeEecCCCEEEEEeeCCEEEEEECCC
Q 002615 566 SHKFICADAKRSSVLWEIKLEGRI---------------------------ECSAAVLADFSQVVVGCYKGKIYFLDYLT 618 (900)
Q Consensus 566 ~g~l~~~d~~tG~~~w~~~~~~~~---------------------------~~~~~~~~~~~~i~vg~~dg~l~~~d~~t 618 (900)
++.++.+|..||+++|+...-+-+ ..++....+|++++..-.-..||++|..|
T Consensus 95 d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~t 174 (299)
T PF14269_consen 95 DDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPST 174 (299)
T ss_pred cceeEEeccCCCCEEEEEEhhheecccccccccccccCCCcCCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCC
Confidence 456899999999999986532111 12333445566666666667899999999
Q ss_pred CcEEEEEecCCc---------eee--eeeEe---CCCCEEEEe-----------cCCCeEEEEECCCCeEEEeeccC---
Q 002615 619 GDIYWTFQTCGE---------VKC--QPVVD---APRQLIWCG-----------SHDHNLYALDFRNYRCVYKLPCG--- 670 (900)
Q Consensus 619 G~~~w~~~~~~~---------~~~--~~~~~---~~~~~i~~g-----------s~dg~l~~~d~~~g~~~w~~~~~--- 670 (900)
|+++|+...... ... -+-+. ++.+.|-+- ...+.++.+|..+.+..+.....
T Consensus 175 G~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN~~~~~~~~~~s~~~v~~ld~~~~~~~~~~~~~~~~ 254 (299)
T PF14269_consen 175 GKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDNANSDFNGTEPSRGLVLELDPETMTVTLVREYSDHP 254 (299)
T ss_pred CcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcCCCCCCCCCcCCCceEEEEECCCCEEEEEEEeecCC
Confidence 999998743300 000 01111 111222211 12356888888877655443321
Q ss_pred Ccc----ccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeec
Q 002615 671 GSI----FGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHEL 713 (900)
Q Consensus 671 ~~~----~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~ 713 (900)
..+ ..+.-..++++.++-=+..|.+.-++.+ |+++|.+..
T Consensus 255 ~~~~s~~~G~~Q~L~nGn~li~~g~~g~~~E~~~~---G~vv~~~~f 298 (299)
T PF14269_consen 255 DGFYSPSQGSAQRLPNGNVLIGWGNNGRISEFTPD---GEVVWEAQF 298 (299)
T ss_pred CcccccCCCcceECCCCCEEEecCCCceEEEECCC---CCEEEEEEC
Confidence 111 2222333334444444556777777655 888988653
No 433
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.22 E-value=0.09 Score=54.61 Aligned_cols=160 Identities=15% Similarity=0.138 Sum_probs=93.8
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEE-CCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEE-Eeecc
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLD-YLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCV-YKLPC 669 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d-~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~-w~~~~ 669 (900)
..++..++..+-+|..||.++.|+ +..-.++-....+.++... .+.+++..|..-+.| ...+|+..+|..+ |+...
T Consensus 149 ~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL-~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 149 VVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDL-DFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred EEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccc-eeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 456777888999999999999999 4444444444455566543 456666565555556 7899999998544 33222
Q ss_pred CC-ccccCceeec--cCCEEEEEeC---CCcEEEEEcCCCCce--eeeEeec-CCcceeeeeeeeCCCEEEEEeecCcEE
Q 002615 670 GG-SIFGSPAIDE--VHDVLYVAST---SGRLTAISVKALPFH--TLWLHEL-EVPAFASLCITSANRHVICCLVDGHVV 740 (900)
Q Consensus 670 ~~-~~~~~~~~~~--~~~~l~v~t~---~g~l~~~~~~~~~g~--~~w~~~~-~~~~~~s~~~~~~~~~i~~~~~~g~v~ 740 (900)
+. ..++.+-+.. .+..+++++. .+.+..+++...++. ..|+... .....++..+..++..+.+|+.+|.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 22 2333333322 1235555553 344554443321110 1111111 123457788888899999999999999
Q ss_pred EEC-CCCCEEeeec
Q 002615 741 ALD-SSGSIIWRCR 753 (900)
Q Consensus 741 ~~d-~~G~~~w~~~ 753 (900)
.++ .+-+.+...+
T Consensus 307 i~~~~~lq~~~~vk 320 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVK 320 (398)
T ss_pred EEEeceeeeeEeeh
Confidence 999 5555544433
No 434
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.16 E-value=1.6 Score=43.78 Aligned_cols=199 Identities=14% Similarity=0.193 Sum_probs=105.7
Q ss_pred eeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeec----c-CCcc----ccCceeeccCCEEEEEeCCCcEEEEEcC
Q 002615 631 VKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLP----C-GGSI----FGSPAIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 631 ~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~----~-~~~~----~~~~~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
......++..+..+.+++.|+++..||.++..-.|... + ++.+ ++.|-+ ++.+..++.|+++..|.-.
T Consensus 15 lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEf---GqvvA~cS~Drtv~iWEE~ 91 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEF---GQVVATCSYDRTVSIWEEQ 91 (361)
T ss_pred eeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccc---cceEEEEecCCceeeeeec
Confidence 33444566677889999999999999976655445432 2 2333 333433 4677888999999999752
Q ss_pred CCC---ceeeeEeecC----Ccceeeeeeee--CCCEEEEEeecCcEEEEC-CC-CCE-EeeecCCCc---------eec
Q 002615 702 ALP---FHTLWLHELE----VPAFASLCITS--ANRHVICCLVDGHVVALD-SS-GSI-IWRCRTGGP---------IFA 760 (900)
Q Consensus 702 ~~~---g~~~w~~~~~----~~~~~s~~~~~--~~~~i~~~~~~g~v~~~d-~~-G~~-~w~~~~~~~---------~~~ 760 (900)
..+ -...|..... ........+.+ -+=.+.+++.||.+..|+ .+ ..+ .|++...-. ...
T Consensus 92 ~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~ 171 (361)
T KOG2445|consen 92 EKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQP 171 (361)
T ss_pred ccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCc
Confidence 111 1235643221 11112222222 234567778899999998 32 222 376542211 111
Q ss_pred ccccc----ccCCCeEEEEeeC-----CeEEEEeCCCCceeeEE-----ecCCceecccccccccccccccccCCCeEEE
Q 002615 761 GPCTS----FALPSQVLICSRN-----GSIYSFEQESGNLLWEY-----SVGDPITASAYIDEHLQLKLESCLSIDRLVC 826 (900)
Q Consensus 761 ~~~~~----~~~~~~l~~g~~d-----g~l~~~d~~tG~~~w~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 826 (900)
..|+. -.....|.+|+.+ +.++.|....+.-+|.. ....++....+... ....-..++
T Consensus 172 ~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn--------~Gr~y~~lA 243 (361)
T KOG2445|consen 172 CFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPN--------IGRSYHLLA 243 (361)
T ss_pred ceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccc--------cCCceeeEE
Confidence 11222 1123456666654 24555544444444532 12223322222111 122256889
Q ss_pred EEcCCCcEEEEEeec
Q 002615 827 ICTSSGSIHILRVNL 841 (900)
Q Consensus 827 ~g~~~G~v~~~d~~~ 841 (900)
+++.|| |++|+...
T Consensus 244 vA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 244 VATKDG-VRIFKVKV 257 (361)
T ss_pred EeecCc-EEEEEEee
Confidence 999999 99999874
No 435
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=96.14 E-value=0.091 Score=51.98 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=66.1
Q ss_pred eEecCCCEEEEEeeCCEEEEEECCCCcEEE--EEecCC-ceeeeeeEeCCCCEEEEecCCCeEEEEECC-CCeEEEee-c
Q 002615 594 AVLADFSQVVVGCYKGKIYFLDYLTGDIYW--TFQTCG-EVKCQPVVDAPRQLIWCGSHDHNLYALDFR-NYRCVYKL-P 668 (900)
Q Consensus 594 ~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w--~~~~~~-~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~-~g~~~w~~-~ 668 (900)
-++..+..++++-.+|.+-..+...+.+.. ..+.++ +......-..+.+.+|.|+.|+.+.+||.+ .++.+|.- +
T Consensus 128 D~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~k 207 (339)
T KOG0280|consen 128 DISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSK 207 (339)
T ss_pred EeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecce
Confidence 344555678888888877766644443322 111222 222222222345789999999999999998 67888872 2
Q ss_pred cC-CccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 669 CG-GSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 669 ~~-~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
.+ ..+.+.-...+.+..|+.|+.+-.+..||.++
T Consensus 208 vH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 208 VHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred eeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 22 12222111122346899999999999999774
No 436
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.27 Score=46.39 Aligned_cols=152 Identities=13% Similarity=0.066 Sum_probs=93.7
Q ss_pred ceEEEEecC---CCeEEEEECCCCcEEEEEecC-CceeeceeEecCCCEEEEEee-CCEEEEEECCCCcEEEEEecCCce
Q 002615 557 DIYLFVGSH---SHKFICADAKRSSVLWEIKLE-GRIECSAAVLADFSQVVVGCY-KGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 557 ~~~v~igs~---~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~i~vg~~-dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
++.++.++. ...|+.+|+.+|++.|+.++. +.+. .--+..-++.+|.-++ +|.-+.+|+.|-+.+-++...++-
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~F-gEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVF-GEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCcccc-ccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc
Confidence 446666553 246999999999999998877 3332 2233344567888886 567789999998888777766654
Q ss_pred eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc--CC-ccccCceeeccCCEEEEEeC-CCcEEEEEcCCCCcee
Q 002615 632 KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC--GG-SIFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHT 707 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~--~~-~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~ 707 (900)
... .. ++..++.++....++.-|+++-...-+... .| ++..-.-+.-.++.+|..-+ ...+.++++++ |++
T Consensus 134 WgL--t~-d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~s--GrV 208 (262)
T COG3823 134 WGL--TS-DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDS--GRV 208 (262)
T ss_pred eee--ec-CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCC--CcE
Confidence 432 22 345688877777888889887544433322 12 11111111112355655433 34578888887 887
Q ss_pred eeEeecC
Q 002615 708 LWLHELE 714 (900)
Q Consensus 708 ~w~~~~~ 714 (900)
+--++..
T Consensus 209 ~~widlS 215 (262)
T COG3823 209 VAWIDLS 215 (262)
T ss_pred EEEEEcc
Confidence 6555544
No 437
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=96.10 E-value=0.13 Score=58.76 Aligned_cols=43 Identities=19% Similarity=0.446 Sum_probs=38.5
Q ss_pred EecCceEEEcc----CCcEEEEcccCCcEEECceeeChHHHHHHHhC
Q 002615 220 FRTGDFARRIQ----SGDLVFLGRKDRTIKINGQRMALEEIEHTLRG 262 (900)
Q Consensus 220 ~~TGDl~~~~~----~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~ 262 (900)
|+.||.+++.. .-.|.|+||.+.++.+.|+++.-.+++.++.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 89999999753 24699999999999999999999999998876
No 438
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.09 E-value=0.061 Score=58.44 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=72.6
Q ss_pred CCCEEEEEeeCCEEEEEECCCCcE-------EEEEecCCceeeeeeEeC-CCCEEEEecCCCeEEEEECCCCeEEEeecc
Q 002615 598 DFSQVVVGCYKGKIYFLDYLTGDI-------YWTFQTCGEVKCQPVVDA-PRQLIWCGSHDHNLYALDFRNYRCVYKLPC 669 (900)
Q Consensus 598 ~~~~i~vg~~dg~l~~~d~~tG~~-------~w~~~~~~~~~~~~~~~~-~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~ 669 (900)
|...+.|+|.||.|..|....+-. .-....+....++.-+.+ ..+.+.++++|-+|..||..+++..-++..
T Consensus 639 D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g 718 (1012)
T KOG1445|consen 639 DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG 718 (1012)
T ss_pred ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc
Confidence 345799999999998887665432 122333444444444443 235677889999999999999987777665
Q ss_pred CCccccCceeeccCCEEEEEeCCCcEEEEEcCC
Q 002615 670 GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKA 702 (900)
Q Consensus 670 ~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~ 702 (900)
+..-+-..+.++++..+.....||.+..|++..
T Consensus 719 HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs 751 (1012)
T KOG1445|consen 719 HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRS 751 (1012)
T ss_pred CcCceeEEEECCCCcceeeeecCceEEEeCCCC
Confidence 544444455555567777778899999999886
No 439
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=96.09 E-value=0.073 Score=53.74 Aligned_cols=146 Identities=14% Similarity=0.199 Sum_probs=92.1
Q ss_pred CCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCC-----eEEEeeccCCccccCceeecc
Q 002615 608 KGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY-----RCVYKLPCGGSIFGSPAIDEV 682 (900)
Q Consensus 608 dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g-----~~~w~~~~~~~~~~~~~~~~~ 682 (900)
+..+-..|.+||... .|...+.+.+. -+...++.++.|+.+|.|+.+|+..+ .+..++..+..+.+--.+.-.
T Consensus 233 sqqv~L~nvetg~~q-sf~sksDVfAl-Qf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s 310 (425)
T KOG2695|consen 233 SQQVLLTNVETGHQQ-SFQSKSDVFAL-QFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFS 310 (425)
T ss_pred cceeEEEEeeccccc-ccccchhHHHH-HhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccc
Confidence 444667788888654 24444444332 23334688999999999999999764 333344445555554444434
Q ss_pred CCEEEEEeCCCcEEEEEcCCC-CceeeeEeecCCccee--eeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC
Q 002615 683 HDVLYVASTSGRLTAISVKAL-PFHTLWLHELEVPAFA--SLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 683 ~~~l~v~t~~g~l~~~~~~~~-~g~~~w~~~~~~~~~~--s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~ 755 (900)
+..|.+...+|.|..||.... .++-+-++..+.+... -..+...++.|+.++.|-....|. .+|.++-+.+..
T Consensus 311 ~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 311 QQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred cceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCC
Confidence 678888889999999998741 1222556655544321 223445678888888887777777 777777655433
No 440
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=96.08 E-value=2.2 Score=44.61 Aligned_cols=117 Identities=14% Similarity=0.086 Sum_probs=74.1
Q ss_pred ccceEEeeCCceEEEEecCCCeEEEEECC--------C----CcEEEEEec----CCceeeceeEecCCCEEEEEeeCCE
Q 002615 547 ASPLVVLKDSDIYLFVGSHSHKFICADAK--------R----SSVLWEIKL----EGRIECSAAVLADFSQVVVGCYKGK 610 (900)
Q Consensus 547 ~sp~v~~~~~~~~v~igs~~g~l~~~d~~--------t----G~~~w~~~~----~~~~~~~~~~~~~~~~i~vg~~dg~ 610 (900)
+--++.+...++.+..|+.+|.+.+|-.. + .++.|...- +..-..-.+.++++..+.+|+.|..
T Consensus 67 aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns 146 (434)
T KOG1009|consen 67 AVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNS 146 (434)
T ss_pred eeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccce
Confidence 33344455566677888888888888654 2 134465321 1111123567788889999999999
Q ss_pred EEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeE
Q 002615 611 IYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRC 663 (900)
Q Consensus 611 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~ 663 (900)
++.||...|...-...-+.......++++-+..|..-+.|...+.+++...+.
T Consensus 147 ~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~ 199 (434)
T KOG1009|consen 147 VRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQV 199 (434)
T ss_pred EEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeee
Confidence 99999999998876665555544445555555555555565566555544333
No 441
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.05 E-value=1.1 Score=48.00 Aligned_cols=219 Identities=15% Similarity=0.172 Sum_probs=111.8
Q ss_pred EEEEEECCCCcEEEEEecCC--ceeeeeeE--eC----CCCEEEEecC---------C-CeEEEEECCCC-------eEE
Q 002615 610 KIYFLDYLTGDIYWTFQTCG--EVKCQPVV--DA----PRQLIWCGSH---------D-HNLYALDFRNY-------RCV 664 (900)
Q Consensus 610 ~l~~~d~~tG~~~w~~~~~~--~~~~~~~~--~~----~~~~i~~gs~---------d-g~l~~~d~~~g-------~~~ 664 (900)
.|..+|+.+.+.+-++.... .+.+...+ .. ....|++|+. . |.++.|+..+. +.+
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 46677777777766555432 22222122 11 1456777643 2 88999998874 233
Q ss_pred EeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCce-eeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 665 YKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFH-TLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 665 w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~-~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
......+++.+-..+ ++.++++. ++.++.|+.+. .+ ..-.-....+. ....+...++.+++|....++..+.
T Consensus 83 ~~~~~~g~V~ai~~~---~~~lv~~~-g~~l~v~~l~~--~~~l~~~~~~~~~~-~i~sl~~~~~~I~vgD~~~sv~~~~ 155 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF---NGRLVVAV-GNKLYVYDLDN--SKTLLKKAFYDSPF-YITSLSVFKNYILVGDAMKSVSLLR 155 (321)
T ss_dssp EEEEESS-EEEEEEE---TTEEEEEE-TTEEEEEEEET--TSSEEEEEEE-BSS-SEEEEEEETTEEEEEESSSSEEEEE
T ss_pred EEEeecCcceEhhhh---CCEEEEee-cCEEEEEEccC--cccchhhheecceE-EEEEEeccccEEEEEEcccCEEEEE
Confidence 445556666554444 36766555 67799999887 33 22222222222 2333444577999998877777664
Q ss_pred --CCCC-EEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCC-------C--cee--eEEecCCceecc---cc
Q 002615 744 --SSGS-IIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQES-------G--NLL--WEYSVGDPITAS---AY 806 (900)
Q Consensus 744 --~~G~-~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~t-------G--~~~--w~~~~~~~~~~~---~~ 806 (900)
..+. ...-.....+.....+.....++.++++..+|.++.+.... + ++. -.+.++..+... ..
T Consensus 156 ~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l 235 (321)
T PF03178_consen 156 YDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSL 235 (321)
T ss_dssp EETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--S
T ss_pred EEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEe
Confidence 4343 33222222232222222221224888888899888776431 2 232 345555554433 11
Q ss_pred cccccccccccccCCCeEEEEEcCCCcEEEEEe
Q 002615 807 IDEHLQLKLESCLSIDRLVCICTSSGSIHILRV 839 (900)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~ 839 (900)
... ...........++.++.+|.|.++-+
T Consensus 236 ~~~----~~~~~~~~~~~i~~~T~~G~Ig~l~p 264 (321)
T PF03178_consen 236 IPR----SGSSESPNRPQILYGTVDGSIGVLIP 264 (321)
T ss_dssp S------SSSS-TTEEEEEEEEETTS-EEEEEE
T ss_pred eec----CCCCcccccceEEEEecCCEEEEEEe
Confidence 100 00000111356888899999987655
No 442
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=96.04 E-value=0.26 Score=48.05 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=63.1
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCcee-eEEecCC-ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecC---
Q 002615 768 LPSQVLICSRNGSIYSFEQESGNLL-WEYSVGD-PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLD--- 842 (900)
Q Consensus 768 ~~~~l~~g~~dg~l~~~d~~tG~~~-w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~--- 842 (900)
..+.+.+|+.+|.+-.||..+..-. -.+..+. .+.-.-|.. .....++++++||.+|-||.++.
T Consensus 191 qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHp-----------k~p~~Lft~sedGslw~wdas~~~l~ 259 (319)
T KOG4714|consen 191 QQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHP-----------KNPEHLFTCSEDGSLWHWDASTTFLS 259 (319)
T ss_pred cccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccC-----------CCchheeEecCCCcEEEEcCCCceEE
Confidence 3567888999999999998765211 0111111 111111111 12678999999999999998742
Q ss_pred ----cccccccccccceee-eeeec-cCCc--cccCceeeCCEEEEeeeCCeEEEEE
Q 002615 843 ----VTGKENQSKDHMVQE-FAKLE-LQGD--IFSSPVMIGGRVFVGCRDDYIYCIA 891 (900)
Q Consensus 843 ----~~~~~~~~~~~~~~~-~~~~~-l~~~--~~ss~~~~~~~l~vg~~dg~l~~ld 891 (900)
.+...-|...+..+- +.... ++.. .+++.-+.+..|+-|+.-+.+|.++
T Consensus 260 i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 260 ISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred ecCccccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence 222233433333222 11111 1111 2334445678888898888888764
No 443
>PRK05350 acyl carrier protein; Provisional
Probab=96.00 E-value=0.02 Score=46.65 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHhcccCC--cccccCCCc-cccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 359 SDLLQVIRKAFGHALMV--EEVLHHDNF-FTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~--~~i~~~~~F-f~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
+++.+.++++.++.+++ ..+..+.+| -++|-|||..+.|...| .++...+...+|+..++.++..+.
T Consensus 5 ~~i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~~ 80 (82)
T PRK05350 5 EEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERLL 80 (82)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHHh
Confidence 46778888888888876 468888885 78999999999987654 367778999999999999998654
No 444
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.99 E-value=0.15 Score=53.07 Aligned_cols=148 Identities=10% Similarity=0.010 Sum_probs=86.4
Q ss_pred eeCCceEEEEecCCCeEEEEE-CCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEE-EEEecCC-
Q 002615 553 LKDSDIYLFVGSHSHKFICAD-AKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIY-WTFQTCG- 629 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d-~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~-w~~~~~~- 629 (900)
+..++..+-+|..||.++.|+ +..-.++-+...+..+. ...+++|+..+..-+.| ....|+..+|..+ |..+...
T Consensus 152 f~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~-DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~ 229 (398)
T KOG0771|consen 152 FNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVK-DLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKD 229 (398)
T ss_pred EcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccc-cceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccc
Confidence 344567888999999999999 65545544444455543 57889998777666666 6899999999443 2211111
Q ss_pred ceeeeeeEeC--CCCEEEEecC---CCeEEEEECCC--C--eEEEeecc-CCccccCceeeccCCEEEEEeCCCcEEEEE
Q 002615 630 EVKCQPVVDA--PRQLIWCGSH---DHNLYALDFRN--Y--RCVYKLPC-GGSIFGSPAIDEVHDVLYVASTSGRLTAIS 699 (900)
Q Consensus 630 ~~~~~~~~~~--~~~~i~~gs~---dg~l~~~d~~~--g--~~~w~~~~-~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~ 699 (900)
......-+.. ....+++.+. .+.+..+|... + -..|+... .....++..++.++..+.+||.+|.+..++
T Consensus 230 ~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~ 309 (398)
T KOG0771|consen 230 EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYD 309 (398)
T ss_pred hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEE
Confidence 1112222221 1123333321 23344433211 0 01111111 233567778888788899999999999999
Q ss_pred cCC
Q 002615 700 VKA 702 (900)
Q Consensus 700 ~~~ 702 (900)
..+
T Consensus 310 ~~~ 312 (398)
T KOG0771|consen 310 AKS 312 (398)
T ss_pred ece
Confidence 776
No 445
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.91 E-value=2.6 Score=43.79 Aligned_cols=146 Identities=19% Similarity=0.151 Sum_probs=70.5
Q ss_pred ecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEee--------
Q 002615 596 LADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKL-------- 667 (900)
Q Consensus 596 ~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~-------- 667 (900)
...++.+++|+.+| ||.++..+....-+......+... .+.+.-+.+++-+ |+.|++++..+-...-..
T Consensus 4 ~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql-~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 4 DSWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQL-SVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred ccCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEE-EEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 34567899998887 999997222221111111123333 3333445555544 588999987654332210
Q ss_pred -----ccC---C-ccccCceeeccCCEEEEEeCCCcEEEEEcCCC--Cc-eeeeEeecCCcceeeeeeeeCCCEEEEEee
Q 002615 668 -----PCG---G-SIFGSPAIDEVHDVLYVASTSGRLTAISVKAL--PF-HTLWLHELEVPAFASLCITSANRHVICCLV 735 (900)
Q Consensus 668 -----~~~---~-~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~--~g-~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~ 735 (900)
... + ..+...........+.++. ...+..|..... .. +.+-+....... .+..+. ++.+++|..
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~lp~~~-~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEISLPDPP-SSIAFL--GNKICVGTS 156 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEEcCCCc-EEEEEe--CCEEEEEeC
Confidence 111 1 1111000111122344444 345666655431 12 334444444322 222332 677888864
Q ss_pred cCcEEEEC-CCCCEE
Q 002615 736 DGHVVALD-SSGSII 749 (900)
Q Consensus 736 ~g~v~~~d-~~G~~~ 749 (900)
.....+| .++...
T Consensus 157 -~~f~~idl~~~~~~ 170 (275)
T PF00780_consen 157 -KGFYLIDLNTGSPS 170 (275)
T ss_pred -CceEEEecCCCCce
Confidence 4577888 666654
No 446
>KOG2103 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.90 E-value=0.17 Score=57.29 Aligned_cols=122 Identities=15% Similarity=0.174 Sum_probs=75.0
Q ss_pred CcEEEEEecCCce-eeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceee--eeeEeCCCCEEEEecCCCeE
Q 002615 577 SSVLWEIKLEGRI-ECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKC--QPVVDAPRQLIWCGSHDHNL 653 (900)
Q Consensus 577 G~~~w~~~~~~~~-~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~~~~~~i~~gs~dg~l 653 (900)
|++.|+..+-+.. .....+.....+++|.++.|-|-.+|..||++.|+.-.+..... .++. -++......+
T Consensus 24 gkfdwr~~~vG~~k~~~~~~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~~~~~~~~------~~iS~dg~~l 97 (910)
T KOG2103|consen 24 GKFDWRQQLVGVKKVNFLVYDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTSGLGVPLT------NTISVDGRYL 97 (910)
T ss_pred hhcchhhhcccceeEEEEeecCCCceEEEEeccchhheecccCCcEEEEEeccCCCcccCccee------EEEccCCcEE
Confidence 6677776554422 12334555567899999999999999999999998655432221 1111 1344444579
Q ss_pred EEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 654 YALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 654 ~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
+.||.++|...|+...... +....+....+..++ +| +..+. |+..|.....
T Consensus 98 r~wn~~~g~l~~~i~l~~g-~~~~~~~v~~~i~v~---~g----~~~~~--g~l~w~~~~~ 148 (910)
T KOG2103|consen 98 RSWNTNNGILDWEIELADG-FKGLLLEVNKGIAVL---NG----HTRKF--GELKWVESFS 148 (910)
T ss_pred EeecCCCceeeeecccccc-cceeEEEEccceEEE---cc----eeccc--cceeehhhcc
Confidence 9999999999999887655 333333322232222 22 33344 7888876544
No 447
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=95.87 E-value=0.62 Score=47.87 Aligned_cols=156 Identities=12% Similarity=0.090 Sum_probs=94.5
Q ss_pred ccccccceEEeeCCceEEEEecCCCeEEEEECCC------CcEEEEEecCC-ceeeceeEecCCCEEEEEeeCCEEEEEE
Q 002615 543 SCVDASPLVVLKDSDIYLFVGSHSHKFICADAKR------SSVLWEIKLEG-RIECSAAVLADFSQVVVGCYKGKIYFLD 615 (900)
Q Consensus 543 ~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~~t------G~~~w~~~~~~-~~~~~~~~~~~~~~i~vg~~dg~l~~~d 615 (900)
+||.| +-++..+..+..|..+-.+..|+... -+++-....+. ....+..+...+.++|.|..+|.+..-|
T Consensus 57 GCiNA---lqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 57 GCINA---LQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred cccce---eeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 45553 33445577888888888888887642 12221111111 1223556666667899999999999999
Q ss_pred CCCCcEEEEEecCC---ceeeeeeEeCCCCEEEEecCCCeEEEEECCCC----eEEEeeccCCccccCceeeccCCEEEE
Q 002615 616 YLTGDIYWTFQTCG---EVKCQPVVDAPRQLIWCGSHDHNLYALDFRNY----RCVYKLPCGGSIFGSPAIDEVHDVLYV 688 (900)
Q Consensus 616 ~~tG~~~w~~~~~~---~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g----~~~w~~~~~~~~~~~~~~~~~~~~l~v 688 (900)
.++.+.+..+.... .+.. .-..+.++.+.+.+.++.+..||.... .++.-...+....+...-......|.+
T Consensus 134 iEt~qsi~V~~~~~~~~~VY~-m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~ 212 (609)
T KOG4227|consen 134 IETKQSIYVANENNNRGDVYH-MDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILV 212 (609)
T ss_pred cccceeeeeecccCcccceee-cccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEe
Confidence 99998887765443 3332 223344677888888999999997653 233322323333332222222355677
Q ss_pred EeCCCcEEEEEcCC
Q 002615 689 ASTSGRLTAISVKA 702 (900)
Q Consensus 689 ~t~~g~l~~~~~~~ 702 (900)
++..+++-.||...
T Consensus 213 ~~~~~G~~~~D~R~ 226 (609)
T KOG4227|consen 213 NSETGGPNVFDRRM 226 (609)
T ss_pred ccccCCCCceeecc
Confidence 77777788888653
No 448
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.86 E-value=1.4 Score=44.14 Aligned_cols=120 Identities=11% Similarity=-0.014 Sum_probs=69.8
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec----CCceeeeeeE-eC-CCCEEEEecCCCeEEEEECC-----
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT----CGEVKCQPVV-DA-PRQLIWCGSHDHNLYALDFR----- 659 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~----~~~~~~~~~~-~~-~~~~i~~gs~dg~l~~~d~~----- 659 (900)
..+.+...|.++..++.|+.+..||..++.-.|.... ++......+. .+ -+..|.+.++|+++..|.-.
T Consensus 17 hdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~ 96 (361)
T KOG2445|consen 17 HDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEE 96 (361)
T ss_pred eeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccc
Confidence 3556667778899999999999999776666665432 2222222222 12 25667788999999999642
Q ss_pred CCeEEEeecc-----CCccccCceeecc--CCEEEEEeCCCcEEEEEcCCCCceeeeEe
Q 002615 660 NYRCVYKLPC-----GGSIFGSPAIDEV--HDVLYVASTSGRLTAISVKALPFHTLWLH 711 (900)
Q Consensus 660 ~g~~~w~~~~-----~~~~~~~~~~~~~--~~~l~v~t~~g~l~~~~~~~~~g~~~w~~ 711 (900)
.....|.... .+.+. ...+.+. +=.+..++.+|.|..|+.-+.-.-..|+.
T Consensus 97 ~~~~~Wv~~ttl~DsrssV~-DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~L 154 (361)
T KOG2445|consen 97 AHGRRWVRRTTLVDSRSSVT-DVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTL 154 (361)
T ss_pred cccceeEEEEEeecCCccee-EEEecchhcceEEEEeccCcEEEEEecCCccccccchh
Confidence 1223565332 11111 1111111 23466677899999998654222345654
No 449
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=95.79 E-value=5.6 Score=46.71 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=44.7
Q ss_pred eeeceeEecCCCEEEEEeeCCEEEEEECC-CCcEEEEEe-----cCCceeeeeeEeCCCCEEEEecCCC--eEEEEEC
Q 002615 589 IECSAAVLADFSQVVVGCYKGKIYFLDYL-TGDIYWTFQ-----TCGEVKCQPVVDAPRQLIWCGSHDH--NLYALDF 658 (900)
Q Consensus 589 ~~~~~~~~~~~~~i~vg~~dg~l~~~d~~-tG~~~w~~~-----~~~~~~~~~~~~~~~~~i~~gs~dg--~l~~~d~ 658 (900)
+.+.+.+..++....++..+|.||.+-.. +|+..|... .+.....+.+..-+++.+|+||..| .+..++.
T Consensus 259 ~~~~~~v~~~~~~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~lge~siassi~~L~ng~lFvGS~~gdSqLi~L~~ 336 (1096)
T KOG1897|consen 259 IVCYGRVDLQGSRYLLGDEDGMLFKLLLSHTGETVSGLDLKVEYLGETSIASSINYLDNGVLFVGSRFGDSQLIKLNT 336 (1096)
T ss_pred EEEcccccCCccEEEEecCCCcEEEEEeecccccccceEEEEEecCCcchhhhhhcccCceEEEeccCCceeeEEccc
Confidence 44555666777777789999999988776 888887632 1222222222233579999998755 4555543
No 450
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=95.79 E-value=1.4 Score=49.88 Aligned_cols=184 Identities=14% Similarity=0.107 Sum_probs=96.7
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEe--cC--CCEEEEEeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVL--AD--FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~--~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
.-.+.++...|.|..+|...+..+-.+..+.......+.. .+ ...+.+-.....|..||..||+..|++.....+.
T Consensus 79 ~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iL 158 (1062)
T KOG1912|consen 79 QLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEIL 158 (1062)
T ss_pred ceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcce
Confidence 4456777788999999988876653333322111122221 11 1345555566789999999999999998877776
Q ss_pred eeeeEeCC--CCEEEEecCCCeEEEEECC-------CCeEEEeecc-------------CCccccCc------------e
Q 002615 633 CQPVVDAP--RQLIWCGSHDHNLYALDFR-------NYRCVYKLPC-------------GGSIFGSP------------A 678 (900)
Q Consensus 633 ~~~~~~~~--~~~i~~gs~dg~l~~~d~~-------~g~~~w~~~~-------------~~~~~~~~------------~ 678 (900)
++-.+++- ...++.|+ .|.+...+.- .|+......- +....+.| +
T Consensus 159 s~f~~DPfd~rh~~~l~s-~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~fa 237 (1062)
T KOG1912|consen 159 SCFRVDPFDSRHFCVLGS-KGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFA 237 (1062)
T ss_pred eeeeeCCCCcceEEEEcc-CceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhh
Confidence 65455442 23333343 3444443321 1222221111 01111111 1
Q ss_pred eeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCC--cceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 679 IDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEV--PAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 679 ~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~--~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+.+.-..+.+.+....++.+|++- -..+-...... ..|....+....+.+|+.-.||.+..+-
T Consensus 238 f~p~~rn~lfi~~prellv~dle~--~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirv 302 (1062)
T KOG1912|consen 238 FSPHWRNILFITFPRELLVFDLEY--ECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRV 302 (1062)
T ss_pred cChhhhceEEEEeccceEEEcchh--hceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEE
Confidence 122223444556666799999774 33444433322 2234444455556677777777665543
No 451
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.73 E-value=2.9 Score=42.98 Aligned_cols=224 Identities=13% Similarity=0.066 Sum_probs=120.0
Q ss_pred ceEEEEecCCC-eEEEEECCCCcEEEEEecC-Cc-eeeceeEecCCCEEEEEee-----CCEEEEEECCC-CcEEEEEec
Q 002615 557 DIYLFVGSHSH-KFICADAKRSSVLWEIKLE-GR-IECSAAVLADFSQVVVGCY-----KGKIYFLDYLT-GDIYWTFQT 627 (900)
Q Consensus 557 ~~~v~igs~~g-~l~~~d~~tG~~~w~~~~~-~~-~~~~~~~~~~~~~i~vg~~-----dg~l~~~d~~t-G~~~w~~~~ 627 (900)
...|.++-.-| .++.||..+|+..-....+ ++ .+.-.++++||.++|+.-. .|.|-+||... -+.+-.+.+
T Consensus 17 ~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s 96 (305)
T PF07433_consen 17 PEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPS 96 (305)
T ss_pred CeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecC
Confidence 44566666544 5778999999987544433 33 3456789999999998643 47888999873 344444555
Q ss_pred CCceeeeeeEeCCCCEEEEe------------------cCCCeEEEEECCCCeEEEeeccC----CccccCceeeccCCE
Q 002615 628 CGEVKCQPVVDAPRQLIWCG------------------SHDHNLYALDFRNYRCVYKLPCG----GSIFGSPAIDEVHDV 685 (900)
Q Consensus 628 ~~~~~~~~~~~~~~~~i~~g------------------s~dg~l~~~d~~~g~~~w~~~~~----~~~~~~~~~~~~~~~ 685 (900)
++--.-...+.+++..|+++ +.+-.|..+|..+|+++-+..+. ....-...+.. .+.
T Consensus 97 ~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~-~G~ 175 (305)
T PF07433_consen 97 HGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDG-DGT 175 (305)
T ss_pred CCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecC-CCc
Confidence 44222223344444455554 23446788889999887665552 22223334444 355
Q ss_pred EEEEeC-CC-------cEEEEEcCCCCceeeeEeecCC-------cceeeeeeeeCCCEEEEEee-cCcEEEEC-CCCCE
Q 002615 686 LYVAST-SG-------RLTAISVKALPFHTLWLHELEV-------PAFASLCITSANRHVICCLV-DGHVVALD-SSGSI 748 (900)
Q Consensus 686 l~v~t~-~g-------~l~~~~~~~~~g~~~w~~~~~~-------~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~~G~~ 748 (900)
++++.. .| .+..++. |+.+-...... ....+.++..+++.+.+.+. .+.+..|| .+|+.
T Consensus 176 V~~a~Q~qg~~~~~~PLva~~~~----g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~ 251 (305)
T PF07433_consen 176 VAFAMQYQGDPGDAPPLVALHRR----GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL 251 (305)
T ss_pred EEEEEecCCCCCccCCeEEEEcC----CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE
Confidence 665542 11 1111111 11111111111 12255666666666666654 45677787 88887
Q ss_pred EeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCc
Q 002615 749 IWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGN 790 (900)
Q Consensus 749 ~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~ 790 (900)
+-.....+.. .+....++ .++.+..|.+...+....+
T Consensus 252 ~~~~~l~D~c----Gva~~~~~-f~~ssG~G~~~~~~~~~~~ 288 (305)
T PF07433_consen 252 LGSVPLPDAC----GVAPTDDG-FLVSSGQGQLIRLSPDGPQ 288 (305)
T ss_pred eeccccCcee----eeeecCCc-eEEeCCCccEEEccCcccc
Confidence 6544432211 01112223 5555556666666544433
No 452
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=95.70 E-value=0.52 Score=54.92 Aligned_cols=182 Identities=11% Similarity=0.027 Sum_probs=110.3
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCce--eeceeEecCCC--EEEEEeeCCEEEEEECCCCcEEEEEecCCce
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRI--ECSAAVLADFS--QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEV 631 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~--~~~~~~~~~~~--~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~ 631 (900)
++.++++++.+..+..+|.+.+.+.-+.....+. .++..+-.... +++.|+.-|.|+.|++.--+.--....+...
T Consensus 98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~ 177 (967)
T KOG0974|consen 98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGS 177 (967)
T ss_pred hcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCc
Confidence 5677888888888999999988877666555542 22223322223 4666777888999987621111123334444
Q ss_pred eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc--CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeee
Q 002615 632 KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC--GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLW 709 (900)
Q Consensus 632 ~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~--~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w 709 (900)
.-.+.+..++.++.+.|.|..+..|++++++..-..-. ...++. .++.+ ..++.++.+-.+..|+-+ ++++-
T Consensus 178 iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~-~~~~~--n~i~t~gedctcrvW~~~---~~~l~ 251 (967)
T KOG0974|consen 178 IFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA-CCFLP--NRIITVGEDCTCRVWGVN---GTQLE 251 (967)
T ss_pred eEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE-EEecc--ceeEEeccceEEEEEecc---cceeh
Confidence 45556666788999999999999999999876541111 122333 34444 488888889888888654 44333
Q ss_pred EeecCC-cceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 710 LHELEV-PAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 710 ~~~~~~-~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
.+..+. ...-........-.++.+..|+++..++
T Consensus 252 ~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~ 286 (967)
T KOG0974|consen 252 VYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD 286 (967)
T ss_pred hhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence 332221 1111222222333556667788777776
No 453
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.69 E-value=0.87 Score=43.10 Aligned_cols=150 Identities=12% Similarity=0.080 Sum_probs=87.1
Q ss_pred CEEEEecC---CCeEEEEECCCCeEEEeeccC-CccccCceeeccCCEEEEEeC-CCcEEEEEcCCCCceeeeEeecCCc
Q 002615 642 QLIWCGSH---DHNLYALDFRNYRCVYKLPCG-GSIFGSPAIDEVHDVLYVAST-SGRLTAISVKALPFHTLWLHELEVP 716 (900)
Q Consensus 642 ~~i~~gs~---dg~l~~~d~~~g~~~w~~~~~-~~~~~~~~~~~~~~~l~v~t~-~g~l~~~~~~~~~g~~~w~~~~~~~ 716 (900)
+.++.++. ...++.+|..+|+.+|..++. ..++.--... .++.+|.-|+ +|.-+.+|.++ .+.+-++...+.
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~-~gd~~y~LTw~egvaf~~d~~t--~~~lg~~~y~Ge 132 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITK-LGDYFYQLTWKEGVAFKYDADT--LEELGRFSYEGE 132 (262)
T ss_pred CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceee-ccceEEEEEeccceeEEEChHH--hhhhcccccCCc
Confidence 35555432 235999999999999998876 2344433222 3588999887 56667888776 666655544433
Q ss_pred ceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEee--ecC-CCceeccccccccCCCeEEEE-eeCCeEEEEeCCCCce
Q 002615 717 AFASLCITSANRHVICCLVDGHVVALD-SSGSIIWR--CRT-GGPIFAGPCTSFALPSQVLIC-SRNGSIYSFEQESGNL 791 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~--~~~-~~~~~~~~~~~~~~~~~l~~g-~~dg~l~~~d~~tG~~ 791 (900)
. -.+..++..++.+.....++..| ++-...-+ ... +.|+....- ....+|.+|.- .....|..+++++|++
T Consensus 133 G---WgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNE-LE~VdG~lyANVw~t~~I~rI~p~sGrV 208 (262)
T COG3823 133 G---WGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNE-LEWVDGELYANVWQTTRIARIDPDSGRV 208 (262)
T ss_pred c---eeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccc-eeeeccEEEEeeeeecceEEEcCCCCcE
Confidence 2 24555667777776555666666 43322222 111 222211110 01124555553 3455799999999998
Q ss_pred eeEEecC
Q 002615 792 LWEYSVG 798 (900)
Q Consensus 792 ~w~~~~~ 798 (900)
+-.+++.
T Consensus 209 ~~widlS 215 (262)
T COG3823 209 VAWIDLS 215 (262)
T ss_pred EEEEEcc
Confidence 7545443
No 454
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=95.69 E-value=0.069 Score=60.83 Aligned_cols=189 Identities=19% Similarity=0.177 Sum_probs=111.6
Q ss_pred CCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEe--eccCCccccC
Q 002615 599 FSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYK--LPCGGSIFGS 676 (900)
Q Consensus 599 ~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~--~~~~~~~~~~ 676 (900)
.+.+++.+-| .+.+.+.++|.+.|...-. .+...+..... -....+-.+|.+|.+-. +..+.+ +.....+..+
T Consensus 27 e~~~~~stid-~l~a~s~~~g~~~~~l~~~-pvv~~~~~~~~-~~fl~~p~dgsly~l~~--~~sL~Klpftipelv~~~ 101 (903)
T KOG1027|consen 27 ENLLLVSTID-SLHAPSSETGFIKWTLSDD-PVVASPDGVLQ-PAFLPDPRDGSLYTLGN--NLSLTKLPFTIPELVNAS 101 (903)
T ss_pred cccccccccc-cccCccccccceeeeeccC-ccccCCccccc-cccCCCccccceeeccC--CCccccCCccchhhhccC
Confidence 3567778888 7889999999999976432 22222111110 00111233556665432 222222 2223345566
Q ss_pred ceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCC
Q 002615 677 PAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTG 755 (900)
Q Consensus 677 ~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~ 755 (900)
|+-.. +|.+|.++.++..+.+|+++ |+..|.+....+. ...++.|-.+.++..+| .+-...|..+..
T Consensus 102 pcrss-dGi~ysg~k~d~~~lvD~~t--g~~~~tf~~~~~~---------~~~v~~grt~ytv~m~d~~~~~~~wn~t~~ 169 (903)
T KOG1027|consen 102 PCRSS-DGILYSGSKQDIWYLVDPKT--GEIDYTFNTAEPI---------KQLVYLGRTNYTVTMYDKNVRGKTWNTTFG 169 (903)
T ss_pred cccCC-CCeEEecccccceEEecCCc--cceeEEEecCCcc---------hhheecccceeEEecccCcccCceeecccc
Confidence 76654 79999999999999999998 9999988776532 34566666666777777 444445766544
Q ss_pred CceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecc
Q 002615 756 GPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITAS 804 (900)
Q Consensus 756 ~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 804 (900)
......+.......-.-+..+.+|.+.-+|.++|+.+|.-+..+++...
T Consensus 170 dy~a~~~~~~~~~~~~~~~~~~~g~i~t~D~~~g~~~~~q~~~spvv~~ 218 (903)
T KOG1027|consen 170 DYSAQYPSGVRGEKMSHFHSLGNGYIVTVDSESGEKLWLQDLLSPVVAL 218 (903)
T ss_pred chhccCCCccCCceeEEEeecCCccEEeccCcccceeeccccCCceEEE
Confidence 3322222100111111223334788888999999999987776665443
No 455
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=95.67 E-value=0.21 Score=51.78 Aligned_cols=155 Identities=14% Similarity=0.140 Sum_probs=92.1
Q ss_pred eeCCceEEEEecCCCeEEEEECCCC---cEEEEE-ecCCceeeceeEecCCCEEEEEeeCCEEEEEECCC---CcEEEEE
Q 002615 553 LKDSDIYLFVGSHSHKFICADAKRS---SVLWEI-KLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLT---GDIYWTF 625 (900)
Q Consensus 553 ~~~~~~~v~igs~~g~l~~~d~~tG---~~~w~~-~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~t---G~~~w~~ 625 (900)
.+++...|++++.+...+.++.... ...|.. ....+. .+..+..+...+.++..-|.+|.+|.-+ |...-..
T Consensus 70 ~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~-~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~l 148 (390)
T KOG3914|consen 70 TSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRP-TAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPIL 148 (390)
T ss_pred cCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCc-ceeeeeeccceEEEEeecCCceeeeeecccccCcchhh
Confidence 4556777888887776444443322 223332 222222 2334444555677777677777776443 3222111
Q ss_pred ecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc-CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCC
Q 002615 626 QTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC-GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALP 704 (900)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~-~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~ 704 (900)
.+-.+....++.+++..|.++..|..|++.....-..+-.+-+ +....+.+++.+ +..|+.++.|++|+.||..+
T Consensus 149 -GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~s-- 224 (390)
T KOG3914|consen 149 -GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDITS-- 224 (390)
T ss_pred -hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEeccc--
Confidence 1223344556677778888888888887766544333333433 234566666665 46689999999999999998
Q ss_pred ceeeeEee
Q 002615 705 FHTLWLHE 712 (900)
Q Consensus 705 g~~~w~~~ 712 (900)
|+.+-...
T Consensus 225 gk~L~t~d 232 (390)
T KOG3914|consen 225 GKLLDTCD 232 (390)
T ss_pred CCcccccc
Confidence 88875443
No 456
>PRK07639 acyl carrier protein; Provisional
Probab=95.62 E-value=0.044 Score=44.92 Aligned_cols=67 Identities=12% Similarity=0.041 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHhcccCC---cccccCCCccc-cCcchHHHHHHHHHh----C--CCchhh--hcCCCHHHHHHHHHhhc
Q 002615 359 SDLLQVIRKAFGHALMV---EEVLHHDNFFT-MGGNSIAAAHVAHNL----G--IDMRLI--YNFPTPSKLEIALLEKK 425 (900)
Q Consensus 359 ~~~~~~~~~~~~~~l~~---~~i~~~~~Ff~-lGgdSl~a~~l~~~l----~--~~~~~~--~~~~t~~~l~~~l~~~~ 425 (900)
+++.+.++++.++.++. +++..+.+|++ +|.||+.+++|...| + ++-..+ -...|+..++.++..+.
T Consensus 4 ~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~~~ 82 (86)
T PRK07639 4 EALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEELQ 82 (86)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHHhh
Confidence 45678889999888876 35788899977 999999999987654 3 444444 46889999999998765
No 457
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.58 E-value=0.52 Score=48.92 Aligned_cols=66 Identities=12% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 640 PRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 640 ~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
..|.+..++.+..|..+|.++..++-.+..+..+++...-.++.+.||.|-.+|.++.||....++
T Consensus 205 ~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 205 NEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred ccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCCCc
Confidence 356788899999999999999998888888877777665555567899999999999999876433
No 458
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=95.54 E-value=0.4 Score=54.39 Aligned_cols=43 Identities=21% Similarity=0.489 Sum_probs=37.5
Q ss_pred EecCceEEEc----cCCcEEEEcccCCcEEECceeeChHHHHHHHhC
Q 002615 220 FRTGDFARRI----QSGDLVFLGRKDRTIKINGQRMALEEIEHTLRG 262 (900)
Q Consensus 220 ~~TGDl~~~~----~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~ 262 (900)
||.||+++.. ..-.+.|++|.+-+..+.|++++-.++..++.+
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 8999999974 235799999999999999999999999887765
No 459
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=95.54 E-value=0.064 Score=52.13 Aligned_cols=141 Identities=12% Similarity=0.145 Sum_probs=81.9
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCce----------eeceeEecCCCEEEEEeeCCEEEEE--ECCCCcEEE--EE
Q 002615 560 LFVGSHSHKFICADAKRSSVLWEIKLEGRI----------ECSAAVLADFSQVVVGCYKGKIYFL--DYLTGDIYW--TF 625 (900)
Q Consensus 560 v~igs~~g~l~~~d~~tG~~~w~~~~~~~~----------~~~~~~~~~~~~i~vg~~dg~l~~~--d~~tG~~~w--~~ 625 (900)
+.+|-.+|.+..||..+|...-.++....+ ..+.-+...-+.-+.|+.+-.+..| +-.+|...- ..
T Consensus 168 llaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~ 247 (323)
T KOG0322|consen 168 LLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEI 247 (323)
T ss_pred EEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceE
Confidence 567778999999999998543222211111 0111121111122445444445444 434454322 12
Q ss_pred ecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEc
Q 002615 626 QTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISV 700 (900)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~ 700 (900)
.+...-.....+-+++..+.++++||.+..|+-+++.++-..+.+..-..+.++.++-+.+..++.|++|..|++
T Consensus 248 ~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 248 TLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 222222222234446677778899999999999999888776666555556666664567778888888877763
No 460
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=95.54 E-value=3.8 Score=42.91 Aligned_cols=115 Identities=12% Similarity=0.069 Sum_probs=72.1
Q ss_pred eEEEEecCCCeEEEEECCCC-------cEEEE--EecCCceeeceeEecCCCEEEEEeeCCEEEEEECCC-------C--
Q 002615 558 IYLFVGSHSHKFICADAKRS-------SVLWE--IKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLT-------G-- 619 (900)
Q Consensus 558 ~~v~igs~~g~l~~~d~~tG-------~~~w~--~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~t-------G-- 619 (900)
+++..|+.|..|..|-...+ ++... ...+.+-...+-++++|+.+..|..+|.+.+|-..+ .
T Consensus 27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~ 106 (434)
T KOG1009|consen 27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEA 106 (434)
T ss_pred cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchh
Confidence 36777777776666644332 22221 222344444566788888888899899999997541 2
Q ss_pred ---cEEEEEec----CCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCc
Q 002615 620 ---DIYWTFQT----CGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGS 672 (900)
Q Consensus 620 ---~~~w~~~~----~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~ 672 (900)
+..|.... +..-..-..+.+++..+.+|+-|..++.||...|+..-...-+..
T Consensus 107 ~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 107 DLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH 166 (434)
T ss_pred hhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc
Confidence 33454321 111122234556778888999999999999999988766554443
No 461
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.50 E-value=3 Score=43.42 Aligned_cols=256 Identities=13% Similarity=0.139 Sum_probs=109.0
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEec---CCc--e-eeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEE
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQT---CGE--V-KCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVY 665 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~---~~~--~-~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w 665 (900)
.+.+.++ +.-|+....|.|+ ...+|-.-|+... ... . .....+.. +..|+....+.|+. . .+|-..|
T Consensus 21 dV~F~d~-~~G~~VG~~g~il--~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~--~~g~ivG~~g~ll~-T-~DgG~tW 93 (302)
T PF14870_consen 21 DVAFVDP-NHGWAVGAYGTIL--KTTDGGKTWQPVSLDLDNPFDYHLNSISFDG--NEGWIVGEPGLLLH-T-TDGGKTW 93 (302)
T ss_dssp EEEESSS-S-EEEEETTTEEE--EESSTTSS-EE-----S-----EEEEEEEET--TEEEEEEETTEEEE-E-SSTTSS-
T ss_pred EEEEecC-CEEEEEecCCEEE--EECCCCccccccccCCCccceeeEEEEEecC--CceEEEcCCceEEE-e-cCCCCCc
Confidence 3444433 3444444456553 3456666676432 111 1 11222232 34455544554332 2 3344445
Q ss_pred ee-c----cCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcc--eeeeeeeeCCCEEEEEeecCc
Q 002615 666 KL-P----CGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPA--FASLCITSANRHVICCLVDGH 738 (900)
Q Consensus 666 ~~-~----~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~--~~s~~~~~~~~~i~~~~~~g~ 738 (900)
+. . ..+..+....+. ++.+++.+..|.+|.- .+ |-.-|+....... +..... ..++.+++.+..|.
T Consensus 94 ~~v~l~~~lpgs~~~i~~l~--~~~~~l~~~~G~iy~T--~D--gG~tW~~~~~~~~gs~~~~~r-~~dG~~vavs~~G~ 166 (302)
T PF14870_consen 94 ERVPLSSKLPGSPFGITALG--DGSAELAGDRGAIYRT--TD--GGKTWQAVVSETSGSINDITR-SSDGRYVAVSSRGN 166 (302)
T ss_dssp EE----TT-SS-EEEEEEEE--TTEEEEEETT--EEEE--SS--TTSSEEEEE-S----EEEEEE--TTS-EEEEETTSS
T ss_pred EEeecCCCCCCCeeEEEEcC--CCcEEEEcCCCcEEEe--CC--CCCCeeEcccCCcceeEeEEE-CCCCcEEEEECccc
Confidence 43 2 223333323333 3677777778877653 23 6678876543322 222222 34555555556677
Q ss_pred EEEECCCCCEEeeec---CCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEecCCc---e--ecccccccc
Q 002615 739 VVALDSSGSIIWRCR---TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYSVGDP---I--TASAYIDEH 810 (900)
Q Consensus 739 v~~~d~~G~~~w~~~---~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~---~--~~~~~~~~~ 810 (900)
++.--..|+-.|+.. ....+.+. ....++.+|+.+..|.|++=+.......|....... - +..+...
T Consensus 167 ~~~s~~~G~~~w~~~~r~~~~riq~~---gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~-- 241 (302)
T PF14870_consen 167 FYSSWDPGQTTWQPHNRNSSRRIQSM---GFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYR-- 241 (302)
T ss_dssp EEEEE-TT-SS-EEEE--SSS-EEEE---EE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEES--
T ss_pred EEEEecCCCccceEEccCccceehhc---eecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEec--
Confidence 765434455455532 22222222 234568999999888888776333444565432111 0 1111111
Q ss_pred cccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeec----cCCccccCceeeCCEEEEeeeCCe
Q 002615 811 LQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLE----LQGDIFSSPVMIGGRVFVGCRDDY 886 (900)
Q Consensus 811 ~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ss~~~~~~~l~vg~~dg~ 886 (900)
.++.+|+++.+|.|++= .+.| +.|.+.. .+++...-..+.+++-|+-..+|.
T Consensus 242 ----------~~~~~wa~gg~G~l~~S-~DgG-------------ktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G~ 297 (302)
T PF14870_consen 242 ----------PPNEIWAVGGSGTLLVS-TDGG-------------KTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDGV 297 (302)
T ss_dssp ----------SSS-EEEEESTT-EEEE-SSTT-------------SS-EE-GGGTTSSS---EEEEEETTEEEEE-STTE
T ss_pred ----------CCCCEEEEeCCccEEEe-CCCC-------------ccceECccccCCCCceEEEEEcCCCceEEECCCcE
Confidence 25778888888866542 2222 3343332 233332222235578888888888
Q ss_pred EEEE
Q 002615 887 IYCI 890 (900)
Q Consensus 887 l~~l 890 (900)
|..|
T Consensus 298 ll~~ 301 (302)
T PF14870_consen 298 LLRY 301 (302)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8766
No 462
>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.48 E-value=0.036 Score=44.92 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcccCCc--ccccCCCcc-ccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhh
Q 002615 360 DLLQVIRKAFGHALMVE--EVLHHDNFF-TMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEK 424 (900)
Q Consensus 360 ~~~~~~~~~~~~~l~~~--~i~~~~~Ff-~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~ 424 (900)
.+...++++..+.|+.+ .+..+++|. ++|.|||.++.|.-.| .++...+...+|+..++.++...
T Consensus 5 ~~~~~i~~ii~e~l~~~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~~ 78 (80)
T COG0236 5 AIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEEL 78 (80)
T ss_pred HHHHHHHHHHHHHhCCchhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHHh
Confidence 46778888888888774 477778887 5999999999997654 47788889999999999998764
No 463
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=95.45 E-value=0.24 Score=42.12 Aligned_cols=89 Identities=13% Similarity=0.211 Sum_probs=62.5
Q ss_pred CCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccc
Q 002615 769 PSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKEN 848 (900)
Q Consensus 769 ~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~ 848 (900)
.+.|++||.|..|+.|+. .++++++...+.+....... .+.+..+..+|+|-+|+..
T Consensus 15 ~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~L~~~~-------------~~~F~Y~l~NGTVGvY~~~-------- 71 (111)
T PF14783_consen 15 ENELLVGSDDFEIRVFKG--DEIVAEITETDKVTSLCSLG-------------GGRFAYALANGTVGVYDRS-------- 71 (111)
T ss_pred cceEEEecCCcEEEEEeC--CcEEEEEecccceEEEEEcC-------------CCEEEEEecCCEEEEEeCc--------
Confidence 367999999999999974 47888887777665543222 5678889999999999875
Q ss_pred cccccceeeeeeeccCCccccCceeeC-----CEEEEeeeCCeE
Q 002615 849 QSKDHMVQEFAKLELQGDIFSSPVMIG-----GRVFVGCRDDYI 887 (900)
Q Consensus 849 ~~~~~~~~~~~~~~l~~~~~ss~~~~~-----~~l~vg~~dg~l 887 (900)
+.+|+.+....+.+....+- ..|.+|-.+|.+
T Consensus 72 -------~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkv 108 (111)
T PF14783_consen 72 -------QRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKV 108 (111)
T ss_pred -------ceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeE
Confidence 44566665555444333321 268888888865
No 464
>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated
Probab=95.37 E-value=0.043 Score=43.82 Aligned_cols=63 Identities=13% Similarity=0.189 Sum_probs=47.3
Q ss_pred HHHHHHHHHhcccCCc--ccccCCCccccCc-chHHHHHHHHHh----C--CCchhhhc--CCCHHHHHHHHHh
Q 002615 361 LLQVIRKAFGHALMVE--EVLHHDNFFTMGG-NSIAAAHVAHNL----G--IDMRLIYN--FPTPSKLEIALLE 423 (900)
Q Consensus 361 ~~~~~~~~~~~~l~~~--~i~~~~~Ff~lGg-dSl~a~~l~~~l----~--~~~~~~~~--~~t~~~l~~~l~~ 423 (900)
+++.+++++.+..+.+ .+..++++|+.|+ |||.+++|...| + ++...+-. +.|+..++.++.+
T Consensus 3 i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~~~f~Tv~~i~~~v~~ 76 (78)
T PRK05087 3 FKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDRDDWNTPNKIIAKVEE 76 (78)
T ss_pred HHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCHHhhcCHHHHHHHHHH
Confidence 5567777777776554 4668899999996 999999998665 3 55555544 7899999988865
No 465
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.33 E-value=1.2 Score=51.42 Aligned_cols=170 Identities=15% Similarity=0.169 Sum_probs=83.8
Q ss_pred EEEEEECCCCcEEEEEecCCc-eeeeeeEeCCCCEEEE-ecCC------CeEEEEECCCCeEEEeeccC----CccccCc
Q 002615 610 KIYFLDYLTGDIYWTFQTCGE-VKCQPVVDAPRQLIWC-GSHD------HNLYALDFRNYRCVYKLPCG----GSIFGSP 677 (900)
Q Consensus 610 ~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~~~~~~i~~-gs~d------g~l~~~d~~~g~~~w~~~~~----~~~~~~~ 677 (900)
.+.+||+.+++-.+....... .....++. ++.||+ |+.+ ..+++||+.+.+ |..-.. ....+ .
T Consensus 302 ~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~--W~~~a~M~~~R~~~~-v 376 (571)
T KOG4441|consen 302 SVECYDPKTNEWSSLAPMPSPRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQ--WTPVAPMNTKRSDFG-V 376 (571)
T ss_pred eeEEecCCcCcEeecCCCCcccccccEEEE--CCEEEEEccccCCCcccceEEEecCCCCc--eeccCCccCccccce-e
Confidence 577889888733222222221 12222232 245554 6666 357889988776 865221 11111 1
Q ss_pred eeeccCCEEEE-EeCCC-----cEEEEEcCCCCceeeeEeecCCcc-eeeeeeeeCCCEEEEEe-ec------CcEEEEC
Q 002615 678 AIDEVHDVLYV-ASTSG-----RLTAISVKALPFHTLWLHELEVPA-FASLCITSANRHVICCL-VD------GHVVALD 743 (900)
Q Consensus 678 ~~~~~~~~l~v-~t~~g-----~l~~~~~~~~~g~~~w~~~~~~~~-~~s~~~~~~~~~i~~~~-~~------g~v~~~d 743 (900)
+.- ++.||+ |..+| .+-+||+.+ ..|....+-.. ........-++.+|+.+ .+ ..+.+||
T Consensus 377 ~~l--~g~iYavGG~dg~~~l~svE~YDp~~----~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YD 450 (571)
T KOG4441|consen 377 AVL--DGKLYAVGGFDGEKSLNSVECYDPVT----NKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYD 450 (571)
T ss_pred EEE--CCEEEEEeccccccccccEEEecCCC----CcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEc
Confidence 222 366665 44443 466777664 56776543322 23333444566776643 22 3467888
Q ss_pred -CCCCEEeeecCCCcee-ccccccccCCCeEEEE-eeCC-----eEEEEeCCCCceeeEE
Q 002615 744 -SSGSIIWRCRTGGPIF-AGPCTSFALPSQVLIC-SRNG-----SIYSFEQESGNLLWEY 795 (900)
Q Consensus 744 -~~G~~~w~~~~~~~~~-~~~~~~~~~~~~l~~g-~~dg-----~l~~~d~~tG~~~w~~ 795 (900)
.++ .|+....-+.- +... ....++.||+. +.+| .+.+||+++. .|+.
T Consensus 451 P~t~--~W~~~~~M~~~R~~~g-~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~--~W~~ 505 (571)
T KOG4441|consen 451 PETN--TWTLIAPMNTRRSGFG-VAVLNGKIYVVGGFDGTSALSSVERYDPETN--QWTM 505 (571)
T ss_pred CCCC--ceeecCCcccccccce-EEEECCEEEEECCccCCCccceEEEEcCCCC--ceeE
Confidence 544 36543221111 1111 12235566654 4444 3788888765 4554
No 466
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.32 E-value=1.4 Score=50.91 Aligned_cols=212 Identities=16% Similarity=0.227 Sum_probs=102.5
Q ss_pred CeEEEEECCCCcEEEEEe--cC-CceeeceeEecCCCEEE-EEeeC-C-----EEEEEECCCCcEEEEEecCCce--eee
Q 002615 567 HKFICADAKRSSVLWEIK--LE-GRIECSAAVLADFSQVV-VGCYK-G-----KIYFLDYLTGDIYWTFQTCGEV--KCQ 634 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~--~~-~~~~~~~~~~~~~~~i~-vg~~d-g-----~l~~~d~~tG~~~w~~~~~~~~--~~~ 634 (900)
..+.+||+.+++ |..- .. .+...++++..+ .|| +|.++ | .+++||+.+++ |.. ..... .+.
T Consensus 301 ~~ve~yd~~~~~--w~~~a~m~~~r~~~~~~~~~~--~lYv~GG~~~~~~~l~~ve~YD~~~~~--W~~-~a~M~~~R~~ 373 (571)
T KOG4441|consen 301 RSVECYDPKTNE--WSSLAPMPSPRCRVGVAVLNG--KLYVVGGYDSGSDRLSSVERYDPRTNQ--WTP-VAPMNTKRSD 373 (571)
T ss_pred ceeEEecCCcCc--EeecCCCCcccccccEEEECC--EEEEEccccCCCcccceEEEecCCCCc--eec-cCCccCcccc
Confidence 368899999885 6532 22 233334444433 455 56667 3 68899988887 864 22111 111
Q ss_pred eeEeCCCCEEEE-ecCCC-----eEEEEECCCCeEEEeeccCCc-cccCceeeccCCEEEEEeC-C------CcEEEEEc
Q 002615 635 PVVDAPRQLIWC-GSHDH-----NLYALDFRNYRCVYKLPCGGS-IFGSPAIDEVHDVLYVAST-S------GRLTAISV 700 (900)
Q Consensus 635 ~~~~~~~~~i~~-gs~dg-----~l~~~d~~~g~~~w~~~~~~~-~~~~~~~~~~~~~l~v~t~-~------g~l~~~~~ 700 (900)
..+..-++.||+ |+.|| .+-+||+.+. .|..-..-. ..+......-++.||+... + ..+.+||+
T Consensus 374 ~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~--~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP 451 (571)
T KOG4441|consen 374 FGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTN--KWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDP 451 (571)
T ss_pred ceeEEECCEEEEEeccccccccccEEEecCCCC--cccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcC
Confidence 111112355664 65554 4778887754 465433111 1111111112477776442 2 34678887
Q ss_pred CCCCceeeeEeecCCcce-eeeeeeeCCCEEEE-EeecC-----cEEEEC-CCCCEEeeecCCCce-eccccccccCCCe
Q 002615 701 KALPFHTLWLHELEVPAF-ASLCITSANRHVIC-CLVDG-----HVVALD-SSGSIIWRCRTGGPI-FAGPCTSFALPSQ 771 (900)
Q Consensus 701 ~~~~g~~~w~~~~~~~~~-~s~~~~~~~~~i~~-~~~~g-----~v~~~d-~~G~~~w~~~~~~~~-~~~~~~~~~~~~~ 771 (900)
.+ -.|+....-+.. ........++.||+ |+.++ .+.+|| .+. .|+.-..-.. .+...+ ...++.
T Consensus 452 ~t----~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~--~W~~v~~m~~~rs~~g~-~~~~~~ 524 (571)
T KOG4441|consen 452 ET----NTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETN--QWTMVAPMTSPRSAVGV-VVLGGK 524 (571)
T ss_pred CC----CceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCC--ceeEcccCccccccccE-EEECCE
Confidence 75 467664432211 11223333555555 44444 267788 432 3554321111 111111 222445
Q ss_pred EEE-EeeCC-----eEEEEeCCCCceeeEEe
Q 002615 772 VLI-CSRNG-----SIYSFEQESGNLLWEYS 796 (900)
Q Consensus 772 l~~-g~~dg-----~l~~~d~~tG~~~w~~~ 796 (900)
+|+ |..+| .+-+||+.+. .|+..
T Consensus 525 ly~vGG~~~~~~l~~ve~ydp~~d--~W~~~ 553 (571)
T KOG4441|consen 525 LYAVGGFDGNNNLNTVECYDPETD--TWTEV 553 (571)
T ss_pred EEEEecccCccccceeEEcCCCCC--ceeeC
Confidence 554 34443 5777877765 36543
No 467
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=95.26 E-value=1.9 Score=42.01 Aligned_cols=124 Identities=10% Similarity=0.059 Sum_probs=73.7
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEec--CCceeeeeeEeCCCCEEEE--ecCCCeEEEEECCCCeEEEeeccCCccccC
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQT--CGEVKCQPVVDAPRQLIWC--GSHDHNLYALDFRNYRCVYKLPCGGSIFGS 676 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~~~~~i~~--gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~ 676 (900)
..+.|. ..||.++..+... -.... .+. .....+.+++..+.+ |..+..+..||.+ ++.+..+.. .....
T Consensus 33 ks~~~~--~~l~~~~~~~~~~-~~i~l~~~~~-I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~--~~~n~ 105 (194)
T PF08662_consen 33 KSYYGE--FELFYLNEKNIPV-ESIELKKEGP-IHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGT--QPRNT 105 (194)
T ss_pred ceEEee--EEEEEEecCCCcc-ceeeccCCCc-eEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecC--CCceE
Confidence 344443 4588887554433 23333 223 444566776666433 5556789999986 666666542 23334
Q ss_pred ceeeccCCEEEEEeC---CCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEee
Q 002615 677 PAIDEVHDVLYVAST---SGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLV 735 (900)
Q Consensus 677 ~~~~~~~~~l~v~t~---~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~ 735 (900)
...++.+..+.+++. .|.+..||.++ .+.+-+.+. ........++++.++.+++.
T Consensus 106 i~wsP~G~~l~~~g~~n~~G~l~~wd~~~--~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 106 ISWSPDGRFLVLAGFGNLNGDLEFWDVRK--KKKISTFEH--SDATDVEWSPDGRYLATATT 163 (194)
T ss_pred EEECCCCCEEEEEEccCCCcEEEEEECCC--CEEeecccc--CcEEEEEEcCCCCEEEEEEe
Confidence 556666777877753 46799999886 666654432 22345566777777776654
No 468
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=95.21 E-value=1.5 Score=49.61 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=85.5
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeece----------eEecC--CCEEEEEeeCCEEEEEECCCCcEEE
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSA----------AVLAD--FSQVVVGCYKGKIYFLDYLTGDIYW 623 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~----------~~~~~--~~~i~vg~~dg~l~~~d~~tG~~~w 623 (900)
..|.+..|+|+- |..+|..+-+.+-....+.....++ ..++. .-.|.++.-.|.|..+|...+..+-
T Consensus 25 ~~GLiAygshsl-V~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~ 103 (1062)
T KOG1912|consen 25 PSGLIAYGSHSL-VSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN 103 (1062)
T ss_pred ccceEEEecCce-EEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh
Confidence 356778888875 8889988777665555543211111 11111 1135556667999999998887653
Q ss_pred EEecCCceee----eeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeec-cCCEEEEEeCCCcEEEE
Q 002615 624 TFQTCGEVKC----QPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDE-VHDVLYVASTSGRLTAI 698 (900)
Q Consensus 624 ~~~~~~~~~~----~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~-~~~~l~v~t~~g~l~~~ 698 (900)
.++.+..... .+.-++....+.+-.....+..||..+|+..|+++....+.+...+++ +...+.+-+..|.+...
T Consensus 104 ~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~ 183 (1062)
T KOG1912|consen 104 WLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSC 183 (1062)
T ss_pred hhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEE
Confidence 3433322211 122233334555555567899999999999999988766655444433 12456666666766655
Q ss_pred E
Q 002615 699 S 699 (900)
Q Consensus 699 ~ 699 (900)
+
T Consensus 184 ~ 184 (1062)
T KOG1912|consen 184 K 184 (1062)
T ss_pred e
Confidence 4
No 469
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.11 E-value=7.5 Score=44.23 Aligned_cols=221 Identities=11% Similarity=0.063 Sum_probs=122.4
Q ss_pred CceEEEEecC-CCeEEEEECCCCcEEEEEecCC----------------ce----eeceeEecCCCEEEEE-eeCCEEEE
Q 002615 556 SDIYLFVGSH-SHKFICADAKRSSVLWEIKLEG----------------RI----ECSAAVLADFSQVVVG-CYKGKIYF 613 (900)
Q Consensus 556 ~~~~v~igs~-~g~l~~~d~~tG~~~w~~~~~~----------------~~----~~~~~~~~~~~~i~vg-~~dg~l~~ 613 (900)
++.++|+-.. +.++-.+++++-+..--...+. .+ +..+-+.+++..++.. -+.+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 4567888663 5677777776544332222211 01 1122234455444433 35677899
Q ss_pred EECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCC----CeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEE
Q 002615 614 LDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHD----HNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVA 689 (900)
Q Consensus 614 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~d----g~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~ 689 (900)
+|.++-++.|+...++... ...++.+++.+|+.+++ +++...+..+...+..+...+.. ....++...+++
T Consensus 220 ID~etmeV~~qV~Vdgnpd-~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~ie----a~vkdGK~~~V~ 294 (635)
T PRK02888 220 VDAETMEVAWQVMVDGNLD-NVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIE----EAVKAGKFKTIG 294 (635)
T ss_pred EECccceEEEEEEeCCCcc-cceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHH----HhhhCCCEEEEC
Confidence 9999999999998876432 23445577888888643 34555665544433334332211 112234666663
Q ss_pred eCCCcEEEEEcCCC--Cc-eeeeEeecCCcceeeeeeeeCCCEEEEEee-cCcEEEEC-CCCCE------------Eeee
Q 002615 690 STSGRLTAISVKAL--PF-HTLWLHELEVPAFASLCITSANRHVICCLV-DGHVVALD-SSGSI------------IWRC 752 (900)
Q Consensus 690 t~~g~l~~~~~~~~--~g-~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~-~g~v~~~d-~~G~~------------~w~~ 752 (900)
++.+..+|..+. .+ +.+-....+... ....+++++.++|+++. +..+.++| .+.+. .-+.
T Consensus 295 --gn~V~VID~~t~~~~~~~v~~yIPVGKsP-HGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev 371 (635)
T PRK02888 295 --GSKVPVVDGRKAANAGSALTRYVPVPKNP-HGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP 371 (635)
T ss_pred --CCEEEEEECCccccCCcceEEEEECCCCc-cceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee
Confidence 467888996641 01 233333333322 34567788888888765 67889998 55432 2222
Q ss_pred cCCCceeccc-cccccCCCeEEEE-eeCCeEEEEeCCC
Q 002615 753 RTGGPIFAGP-CTSFALPSQVLIC-SRNGSIYSFEQES 788 (900)
Q Consensus 753 ~~~~~~~~~~-~~~~~~~~~l~~g-~~dg~l~~~d~~t 788 (900)
..+. .| ...++.+++.|+. -.|..|..||.++
T Consensus 372 evGl----GPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 372 ELGL----GPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ccCC----CcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 2221 12 1124445666665 3467788888765
No 470
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.07 E-value=3.2 Score=42.77 Aligned_cols=133 Identities=11% Similarity=0.085 Sum_probs=72.0
Q ss_pred EEEecCCC-eEEEEECCCCeEEEeeccC--CccccCceeeccCCEEEEE-----eCCCcEEEEEcCCCCceeeeEeecCC
Q 002615 644 IWCGSHDH-NLYALDFRNYRCVYKLPCG--GSIFGSPAIDEVHDVLYVA-----STSGRLTAISVKALPFHTLWLHELEV 715 (900)
Q Consensus 644 i~~gs~dg-~l~~~d~~~g~~~w~~~~~--~~~~~~~~~~~~~~~l~v~-----t~~g~l~~~~~~~~~g~~~w~~~~~~ 715 (900)
++++-.-| .++.||..+|+........ -..+..-+++.++..||+. +..|.|-.||... ....+-++....
T Consensus 20 vafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~-~~~ri~E~~s~G 98 (305)
T PF07433_consen 20 VAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR-GYRRIGEFPSHG 98 (305)
T ss_pred EEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC-CcEEEeEecCCC
Confidence 44443333 4677888888776544332 2234445566655666653 2357888898772 244444443332
Q ss_pred cceeeeeeeeCCCEEEEEe------------------ecCcEEEEC-CCCCEEee--ecCCCceeccccccccCCCeEEE
Q 002615 716 PAFASLCITSANRHVICCL------------------VDGHVVALD-SSGSIIWR--CRTGGPIFAGPCTSFALPSQVLI 774 (900)
Q Consensus 716 ~~~~s~~~~~~~~~i~~~~------------------~~g~v~~~d-~~G~~~w~--~~~~~~~~~~~~~~~~~~~~l~~ 774 (900)
-.-....+.+++..++++. ++-.+..+| .+|+++-+ ++......|.--+....++.+++
T Consensus 99 IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~ 178 (305)
T PF07433_consen 99 IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAF 178 (305)
T ss_pred cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEE
Confidence 1112233444555666653 234577787 88888744 43233333433344555778888
Q ss_pred Eee
Q 002615 775 CSR 777 (900)
Q Consensus 775 g~~ 777 (900)
+..
T Consensus 179 a~Q 181 (305)
T PF07433_consen 179 AMQ 181 (305)
T ss_pred EEe
Confidence 764
No 471
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=95.05 E-value=0.4 Score=55.00 Aligned_cols=282 Identities=11% Similarity=0.069 Sum_probs=146.3
Q ss_pred ccccccccccccccccceEEeeCCceEEEEecCCCeEEEEEC--CCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCE
Q 002615 533 IQELWKVHMESCVDASPLVVLKDSDIYLFVGSHSHKFICADA--KRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGK 610 (900)
Q Consensus 533 ~~~~W~~~~~~~v~~sp~v~~~~~~~~v~igs~~g~l~~~d~--~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~ 610 (900)
..+.|.....+||.... .......+|+|++.|....+=+ .+|-..|....-+.+.. ...... .++.-+ +..
T Consensus 45 ~~L~~~~~~~G~vS~v~---fd~~eel~w~G~~gG~stS~~~s~~~~yssf~v~s~~~v~~-~~~~~~--~i~~ls-~~a 117 (1118)
T KOG1275|consen 45 AELISVGASYGTVSSVH---FDLHEELLWRGSSGGHSTSLLLSHRTGYSSFQVHSIDGVRR-IEPTES--GIFTLS-KTA 117 (1118)
T ss_pred cceeeeccccccccccc---cCchHHhheecccCCceeeeecccccceEEEEEeccchhhh-hhhhhh--hheeee-HHH
Confidence 34567777666654322 1225678999999887665543 33445555443322211 111111 122222 111
Q ss_pred EEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEe
Q 002615 611 IYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAS 690 (900)
Q Consensus 611 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t 690 (900)
+ ..-...|.+...+...+.-.......-+...+..|.....+..+|..+++.........+-.. ++-.++..+++|.
T Consensus 118 l-r~~~r~gl~~~~~~~~s~~~M~~~~~~~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~--imR~Nnr~lf~G~ 194 (1118)
T KOG1275|consen 118 L-RATTRQGLPVFDFTCPSMTKMASSLHMGPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVT--IMRYNNRNLFCGD 194 (1118)
T ss_pred h-hhhhccCceeecccCCCHHHHHHHhccCCcceeecchhhheeeeecccceeeeeeeccCCceE--EEEecCcEEEeec
Confidence 1 112234555555544332111111111334566666777899999999888776655432221 2223347788999
Q ss_pred CCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEeeecCCC---ce--eccccc
Q 002615 691 TSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIWRCRTGG---PI--FAGPCT 764 (900)
Q Consensus 691 ~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w~~~~~~---~~--~~~~~~ 764 (900)
..|.+...|+++ .+.+.+++.+....+. +...++.++.+++.++.+-+. .---.+|....-. |+ -..|.+
T Consensus 195 t~G~V~LrD~~s--~~~iht~~aHs~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~f 270 (1118)
T KOG1275|consen 195 TRGTVFLRDPNS--FETIHTFDAHSGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQF 270 (1118)
T ss_pred ccceEEeecCCc--Cceeeeeeccccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchh
Confidence 999999999998 8888888887765443 444677888887766553332 1111134332111 11 111110
Q ss_pred ---cccCCCeEEEEeeCCeEEEEeCCC-Cce-e--eEEecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEE
Q 002615 765 ---SFALPSQVLICSRNGSIYSFEQES-GNL-L--WEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHIL 837 (900)
Q Consensus 765 ---~~~~~~~l~~g~~dg~l~~~d~~t-G~~-~--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~ 837 (900)
.......+.+.+..|.....|..+ +.. . ......+....... ...+++.+.+|..+|.|..|
T Consensus 271 lrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fD-----------iSsn~~alafgd~~g~v~~w 339 (1118)
T KOG1275|consen 271 LRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFD-----------ISSNGDALAFGDHEGHVNLW 339 (1118)
T ss_pred hhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEE-----------ecCCCceEEEecccCcEeee
Confidence 011124577777778777776322 111 0 01111111111111 12348889999999999999
Q ss_pred Ee
Q 002615 838 RV 839 (900)
Q Consensus 838 d~ 839 (900)
..
T Consensus 340 a~ 341 (1118)
T KOG1275|consen 340 AD 341 (1118)
T ss_pred cC
Confidence 73
No 472
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=95.03 E-value=2.5 Score=43.22 Aligned_cols=225 Identities=12% Similarity=0.132 Sum_probs=117.2
Q ss_pred CceEEEEecCCCeEEEEE-CCCCcEEEEEe-cCCceee-ceeEecCCCEEEEEeeCCEEEEEECCCC----cEEEEEecC
Q 002615 556 SDIYLFVGSHSHKFICAD-AKRSSVLWEIK-LEGRIEC-SAAVLADFSQVVVGCYKGKIYFLDYLTG----DIYWTFQTC 628 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d-~~tG~~~w~~~-~~~~~~~-~~~~~~~~~~i~vg~~dg~l~~~d~~tG----~~~w~~~~~ 628 (900)
.+..||..+.|..+..|- .++|+ .|.-- ......+ ......+...+++|-.+|.++-+....- .....+..+
T Consensus 35 ~e~gv~~~s~drtvrv~lkrds~q-~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h 113 (404)
T KOG1409|consen 35 KEEGVISVSEDRTVRVWLKRDSGQ-YWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAH 113 (404)
T ss_pred CCCCeEEccccceeeeEEeccccc-cCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhh
Confidence 455677788887777764 34444 46421 1111111 2233445557999999999988764321 111112223
Q ss_pred CceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeecc--CCEEEEEeCCCcEEEEEcCCCCce
Q 002615 629 GEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEV--HDVLYVASTSGRLTAISVKALPFH 706 (900)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~--~~~l~v~t~~g~l~~~~~~~~~g~ 706 (900)
.......+++.....|++.+.|..+.---.+.|+-+ ++..+..++.... -...|+|...|.+.........-.
T Consensus 114 ~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~l-----g~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~ 188 (404)
T KOG1409|consen 114 QARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRL-----GGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQ 188 (404)
T ss_pred hcceeeEEecCCceeEEEeccccceEEEeeccCCcc-----cceEeeccCCCCceeeEEEEecccccceEEEEEeecCCc
Confidence 333344455544556666666654432222222211 2223322222110 125677777777766554432244
Q ss_pred eeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-C--CCCEEeeec-CCCceeccccccccCCCeEEEEeeCCeEE
Q 002615 707 TLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-S--SGSIIWRCR-TGGPIFAGPCTSFALPSQVLICSRNGSIY 782 (900)
Q Consensus 707 ~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~--~G~~~w~~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~ 782 (900)
++.+...+............++.++.|..+..+..+| . .|.. .... ..+.+..... ...-..++....||.|.
T Consensus 189 ~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~-~el~gh~~kV~~l~~--~~~t~~l~S~~edg~i~ 265 (404)
T KOG1409|consen 189 LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA-YELQGHNDKVQALSY--AQHTRQLISCGEDGGIV 265 (404)
T ss_pred eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCccee-eeeccchhhhhhhhh--hhhheeeeeccCCCeEE
Confidence 5555555544445556666778899999898999998 2 3322 2211 1111111111 11234688888899999
Q ss_pred EEeCCCC
Q 002615 783 SFEQESG 789 (900)
Q Consensus 783 ~~d~~tG 789 (900)
+||.+..
T Consensus 266 ~w~mn~~ 272 (404)
T KOG1409|consen 266 VWNMNVK 272 (404)
T ss_pred EEeccce
Confidence 9997653
No 473
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=94.83 E-value=0.73 Score=53.00 Aligned_cols=180 Identities=16% Similarity=0.180 Sum_probs=110.8
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQP 635 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~ 635 (900)
+..++..|.++..+..+|..++++.........- ..++-.++..+++|...|+|...|+.+-+.+.++..+....+.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~--v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD- 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASG--VTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD- 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCc--eEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceee-
Confidence 3445677777778999999999887666555421 1233345568999999999999999999999999887765543
Q ss_pred eEeCCCCEEEEecCCCe---------EEEEECCCCeEEEeeccC-Cc--cccCceeeccCCEEEEEeCCCcEEEEEcCCC
Q 002615 636 VVDAPRQLIWCGSHDHN---------LYALDFRNYRCVYKLPCG-GS--IFGSPAIDEVHDVLYVASTSGRLTAISVKAL 703 (900)
Q Consensus 636 ~~~~~~~~i~~gs~dg~---------l~~~d~~~g~~~w~~~~~-~~--~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~ 703 (900)
++-.++.+++.+..+. |.+||++..+.+--+... ++ +.-.|.+ ..++.|.+..|.....|..+.
T Consensus 223 -fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl---~t~~~V~S~sGq~q~vd~~~l 298 (1118)
T KOG1275|consen 223 -FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSL---TTRLAVTSQSGQFQFVDTATL 298 (1118)
T ss_pred -eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccc---cceEEEEecccceeecccccc
Confidence 4444566666554433 344555443332222111 11 1112222 256788888888877773321
Q ss_pred Ccee---eeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 704 PFHT---LWLHELEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 704 ~g~~---~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+.+ ........+......++..++.+.+|..+|.|..|.
T Consensus 299 -sNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 299 -SNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred -CCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 111 111222223345556667778888888888888887
No 474
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.82 E-value=1.2 Score=37.92 Aligned_cols=93 Identities=14% Similarity=0.199 Sum_probs=64.6
Q ss_pred CCceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeee
Q 002615 555 DSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQ 634 (900)
Q Consensus 555 ~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~ 634 (900)
|....|.+||.|..|+.|+- .+++++....+.+.. ......+++..+..+|+|-.|+. .+.+|+.+....+.+.
T Consensus 13 dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~--L~~~~~~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~~ 86 (111)
T PF14783_consen 13 DGENELLVGSDDFEIRVFKG--DEIVAEITETDKVTS--LCSLGGGRFAYALANGTVGVYDR--SQRLWRIKSKNQVTSM 86 (111)
T ss_pred CCcceEEEecCCcEEEEEeC--CcEEEEEecccceEE--EEEcCCCEEEEEecCCEEEEEeC--cceeeeeccCCCeEEE
Confidence 34578999999999999984 478888887777632 22233356777888999999983 5678999877776665
Q ss_pred eeEeCCC---CEEEEecCCCeE
Q 002615 635 PVVDAPR---QLIWCGSHDHNL 653 (900)
Q Consensus 635 ~~~~~~~---~~i~~gs~dg~l 653 (900)
..++.++ .-|++|-.+|.+
T Consensus 87 ~~~D~~gdG~~eLI~GwsnGkv 108 (111)
T PF14783_consen 87 AFYDINGDGVPELIVGWSNGKV 108 (111)
T ss_pred EEEcCCCCCceEEEEEecCCeE
Confidence 5554321 136666555543
No 475
>PTZ00171 acyl carrier protein; Provisional
Probab=94.75 E-value=0.068 Score=48.60 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHhcccCC--cccccCCCcc-ccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 358 ASDLLQVIRKAFGHALMV--EEVLHHDNFF-TMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 358 ~~~~~~~~~~~~~~~l~~--~~i~~~~~Ff-~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
.+++.+.+.+++++.+++ +.+.++.+|. ++|-|||..+.|...| .++..++-...|+..+..++.++.
T Consensus 68 ~~~v~~~l~eiiae~l~vd~~~I~~ds~~~~dLg~DSLd~veLv~~LEdeFgI~Ipded~~~i~TV~dlvd~V~~~~ 144 (148)
T PTZ00171 68 KEDVLTRVKKVVKNFEKVDASKITPESNFVKDLGADSLDVVELLIAIEQEFNLTIPDHDAEKIKTVQDAIDYIEQNN 144 (148)
T ss_pred HHHHHHHHHHHHHHHhCCCHhhCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHHCCCHHHHHHHHHHHH
Confidence 467888999999988876 4588899987 9999999999987655 467777889999999999997654
No 476
>PHA03098 kelch-like protein; Provisional
Probab=94.71 E-value=1.4 Score=50.99 Aligned_cols=169 Identities=9% Similarity=0.134 Sum_probs=77.5
Q ss_pred EEEEEECCCCcEEEEEec--CCce-eeeeeEeCCCCEEE-EecCC-----CeEEEEECCCCeEEEeeccC--Ccccc-Cc
Q 002615 610 KIYFLDYLTGDIYWTFQT--CGEV-KCQPVVDAPRQLIW-CGSHD-----HNLYALDFRNYRCVYKLPCG--GSIFG-SP 677 (900)
Q Consensus 610 ~l~~~d~~tG~~~w~~~~--~~~~-~~~~~~~~~~~~i~-~gs~d-----g~l~~~d~~~g~~~w~~~~~--~~~~~-~~ 677 (900)
.+++||+.+++ |..-. .... ....+.. ++.|| +|+.+ ..+++||+.++ .|..... .+... +.
T Consensus 312 ~v~~yd~~~~~--W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~lp~~r~~~~~ 385 (534)
T PHA03098 312 SVVSYDTKTKS--WNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGES--KWREEPPLIFPRYNPCV 385 (534)
T ss_pred cEEEEeCCCCe--eeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCcCcCCccceE
Confidence 58899987764 54221 1111 1122222 24454 45543 34788888765 4654221 11111 11
Q ss_pred eeeccCCEEEEEeC---C----CcEEEEEcCCCCceeeeEeecCCcce-eeeeeeeCCCEEEEEe-ec--------CcEE
Q 002615 678 AIDEVHDVLYVAST---S----GRLTAISVKALPFHTLWLHELEVPAF-ASLCITSANRHVICCL-VD--------GHVV 740 (900)
Q Consensus 678 ~~~~~~~~l~v~t~---~----g~l~~~~~~~~~g~~~w~~~~~~~~~-~s~~~~~~~~~i~~~~-~~--------g~v~ 740 (900)
+.. ++.+|+.+. + ..+..||+.+ ..|+.-...+.. ........++.+|+.+ .+ ..+.
T Consensus 386 ~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t----~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 459 (534)
T PHA03098 386 VNV--NNLIYVIGGISKNDELLKTVECFSLNT----NKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVE 459 (534)
T ss_pred EEE--CCEEEEECCcCCCCcccceEEEEeCCC----CeeeecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEE
Confidence 222 467776432 1 3578888775 357654332211 1111222355565543 21 1278
Q ss_pred EEC-CCCCEEeeecCCCce-eccccccccCCCeEEEEee------CCeEEEEeCCCCceeeEE
Q 002615 741 ALD-SSGSIIWRCRTGGPI-FAGPCTSFALPSQVLICSR------NGSIYSFEQESGNLLWEY 795 (900)
Q Consensus 741 ~~d-~~G~~~w~~~~~~~~-~~~~~~~~~~~~~l~~g~~------dg~l~~~d~~tG~~~w~~ 795 (900)
+|| .++ .|+.-..-+. ...... ...++.||+.+. ...+++||+++. .|+.
T Consensus 460 ~yd~~~~--~W~~~~~~~~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~ 517 (534)
T PHA03098 460 SYNPVTN--KWTELSSLNFPRINASL-CIFNNKIYVVGGDKYEYYINEIEVYDDKTN--TWTL 517 (534)
T ss_pred EecCCCC--ceeeCCCCCcccccceE-EEECCEEEEEcCCcCCcccceeEEEeCCCC--EEEe
Confidence 888 544 3654321111 011111 112556665432 236788887755 4653
No 477
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=94.68 E-value=5.5 Score=40.20 Aligned_cols=193 Identities=18% Similarity=0.177 Sum_probs=93.5
Q ss_pred eeceeEecCCCEEEEE-eeCCEEEEEECCCCcEEEEEecCCce-eeeeeEeCCCCEEEEec-CCCeEEEEECCC--Ce--
Q 002615 590 ECSAAVLADFSQVVVG-CYKGKIYFLDYLTGDIYWTFQTCGEV-KCQPVVDAPRQLIWCGS-HDHNLYALDFRN--YR-- 662 (900)
Q Consensus 590 ~~~~~~~~~~~~i~vg-~~dg~l~~~d~~tG~~~w~~~~~~~~-~~~~~~~~~~~~i~~gs-~dg~l~~~d~~~--g~-- 662 (900)
.+..++.++.+.+|+- ...+.|+.++. +|+++.++...+.- .-...+. .++.+++.+ .++.++.++... ..
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~-g~~~~vl~~Er~~~L~~~~~~~~~~~~~ 101 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYL-GNGRYVLSEERDQRLYIFTIDDDTTSLD 101 (248)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE--STTEEEEEETTTTEEEEEEE----TT--
T ss_pred ccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEE-CCCEEEEEEcCCCcEEEEEEeccccccc
Confidence 4566777777777654 45678999994 69999888775421 1112222 334555544 367888887632 11
Q ss_pred --EEEeeccC-----CccccCceeeccCCEEEEEeCCC--cEEEEEcCCCCceeee--Eeec-----CCcceeeeeeeeC
Q 002615 663 --CVYKLPCG-----GSIFGSPAIDEVHDVLYVASTSG--RLTAISVKALPFHTLW--LHEL-----EVPAFASLCITSA 726 (900)
Q Consensus 663 --~~w~~~~~-----~~~~~~~~~~~~~~~l~v~t~~g--~l~~~~~~~~~g~~~w--~~~~-----~~~~~~s~~~~~~ 726 (900)
...++.++ +.-+=..+.+..+++++++-... .++.++.......... .... .....++..+.+.
T Consensus 102 ~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~ 181 (248)
T PF06977_consen 102 RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPR 181 (248)
T ss_dssp EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETT
T ss_pred hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCC
Confidence 11223322 11133456677678888887553 4566654110011111 1111 1112355566666
Q ss_pred CCEEEEEee-cCcEEEECCCCCEEeeecCCCce------eccc-cccccCCCeEEEEeeCCeEEEE
Q 002615 727 NRHVICCLV-DGHVVALDSSGSIIWRCRTGGPI------FAGP-CTSFALPSQVLICSRNGSIYSF 784 (900)
Q Consensus 727 ~~~i~~~~~-~g~v~~~d~~G~~~w~~~~~~~~------~~~~-~~~~~~~~~l~~g~~dg~l~~~ 784 (900)
.+.+|+-+. +..|..+|.+|+++-........ +..| .+..+.+|+||+.+.-+..|+|
T Consensus 182 t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 182 TGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp TTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred CCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 677766554 56677788888876444433211 1111 2345567888888877766765
No 478
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=94.57 E-value=1.5 Score=48.25 Aligned_cols=133 Identities=16% Similarity=0.195 Sum_probs=85.1
Q ss_pred CeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEE-eeCC--EEEEEECCCCcEEEEEecCCceeeeeeEeCCCCE
Q 002615 567 HKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVG-CYKG--KIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQL 643 (900)
Q Consensus 567 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg-~~dg--~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~ 643 (900)
..++.+|.++|+..-.....+ ....+.+++|+.+|+.. +.|| .||.+|..++. +++......+-..|.+.+++..
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~g-~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ 295 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFNG-NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSK 295 (425)
T ss_pred ceEEEEeccCCccceeeccCC-ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCE
Confidence 458889999887654443332 23467888988876554 4444 58999976665 5665555566668888888888
Q ss_pred EEEecCCC---eEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCC-Cc--EEEEEcCC
Q 002615 644 IWCGSHDH---NLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTS-GR--LTAISVKA 702 (900)
Q Consensus 644 i~~gs~dg---~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~-g~--l~~~~~~~ 702 (900)
|+..++.+ .||.+|.+.+... +....+.-.+.|...+++..+.+.+.. |. +..+++.+
T Consensus 296 ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 296 IVFTSDRGGRPQIYLYDLEGSQVT-RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred EEEEeCCCCCcceEEECCCCCcee-EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 77766543 4888898877653 333333334477777777777666643 33 44455544
No 479
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.56 E-value=10 Score=43.23 Aligned_cols=129 Identities=7% Similarity=0.008 Sum_probs=73.9
Q ss_pred CCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeec----CcEEEEC-CCCCEEeeecCCCceeccccccc
Q 002615 692 SGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVD----GHVVALD-SSGSIIWRCRTGGPIFAGPCTSF 766 (900)
Q Consensus 692 ~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~----g~v~~~d-~~G~~~w~~~~~~~~~~~~~~~~ 766 (900)
.+.+.++|.++ .+..|+....... ....+..+++.+|+.+++ ..+..++ .+...+..+....-. . ..
T Consensus 214 ~~~vSvID~et--meV~~qV~Vdgnp-d~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~ie---a--~v 285 (635)
T PRK02888 214 RSLFTAVDAET--MEVAWQVMVDGNL-DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIE---E--AV 285 (635)
T ss_pred eEEEEEEECcc--ceEEEEEEeCCCc-ccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHH---H--hh
Confidence 45677888776 8899998876643 233455578888888643 2334444 222222222211100 0 01
Q ss_pred cCCCeEEEEeeCCeEEEEeCCC----C-ceeeEEecCCceecccccccccccccccccCCCeEEEEEcC-CCcEEEEEee
Q 002615 767 ALPSQVLICSRNGSIYSFEQES----G-NLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTS-SGSIHILRVN 840 (900)
Q Consensus 767 ~~~~~l~~g~~dg~l~~~d~~t----G-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~G~v~~~d~~ 840 (900)
..+...+++ ++.|-.+|..+ + +++..+.++.......+ .+++.+++++.. ++.+-++|..
T Consensus 286 kdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~v------------SPDGkylyVanklS~tVSVIDv~ 351 (635)
T PRK02888 286 KAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNT------------SPDGKYFIANGKLSPTVTVIDVR 351 (635)
T ss_pred hCCCEEEEC--CCEEEEEECCccccCCcceEEEEECCCCccceEE------------CCCCCEEEEeCCCCCcEEEEECh
Confidence 123355553 56799999888 3 56666666554433222 223677776654 7889999987
Q ss_pred cC
Q 002615 841 LD 842 (900)
Q Consensus 841 ~~ 842 (900)
+.
T Consensus 352 k~ 353 (635)
T PRK02888 352 KL 353 (635)
T ss_pred hh
Confidence 54
No 480
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=94.54 E-value=1.9 Score=42.00 Aligned_cols=128 Identities=15% Similarity=0.132 Sum_probs=78.8
Q ss_pred CceEEEEecCCCeEEEEECCCCcEEEEEecCCc-eeeceeEecCCCEEEE--EeeCCEEEEEECCCCcEEEEEecCCcee
Q 002615 556 SDIYLFVGSHSHKFICADAKRSSVLWEIKLEGR-IECSAAVLADFSQVVV--GCYKGKIYFLDYLTGDIYWTFQTCGEVK 632 (900)
Q Consensus 556 ~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~~~~~~i~v--g~~dg~l~~~d~~tG~~~w~~~~~~~~~ 632 (900)
..+..|.|. ..|+.++..+... -...+... .......++++..+++ |..+..+..||.+ ++.+..+.. ...
T Consensus 30 ~~~ks~~~~--~~l~~~~~~~~~~-~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~--~~~ 103 (194)
T PF08662_consen 30 KSGKSYYGE--FELFYLNEKNIPV-ESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGT--QPR 103 (194)
T ss_pred cCcceEEee--EEEEEEecCCCcc-ceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecC--CCc
Confidence 444555543 3477777665433 23333221 2346778888887544 4456789999975 777766643 222
Q ss_pred eeeeEeCCCCEEEEecC---CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeC
Q 002615 633 CQPVVDAPRQLIWCGSH---DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVAST 691 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~---dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~ 691 (900)
-...+++.+..+++++. .|.|..||.++.+.+-+..... ......++++..+..++.
T Consensus 104 n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~--~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 104 NTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD--ATDVEWSPDGRYLATATT 163 (194)
T ss_pred eEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc--EEEEEEcCCCCEEEEEEe
Confidence 34567777788887653 4679999999888886655433 344455665666666654
No 481
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.52 E-value=9.4 Score=42.17 Aligned_cols=185 Identities=12% Similarity=0.158 Sum_probs=93.5
Q ss_pred ccceEEeeCCceEEEEecCCC-eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEE
Q 002615 547 ASPLVVLKDSDIYLFVGSHSH-KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTF 625 (900)
Q Consensus 547 ~sp~v~~~~~~~~v~igs~~g-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~ 625 (900)
+.|+.+..+....+-.++... .|..|+.. |+.+++............++.+. .+++-..||.++.+|.. |+. ++
T Consensus 40 gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~-G~~--~f 114 (410)
T PF04841_consen 40 GGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF-GEF--QF 114 (410)
T ss_pred CceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCC-Cce--ee
Confidence 345655555444443344433 48888764 88888876654333456676654 56666789999999965 666 55
Q ss_pred ecCCceeeeee--------EeCCCCEEEEecCCCeEEEEECCCCeEEEee--ccCCcc---------ccCceeeccCCEE
Q 002615 626 QTCGEVKCQPV--------VDAPRQLIWCGSHDHNLYALDFRNYRCVYKL--PCGGSI---------FGSPAIDEVHDVL 686 (900)
Q Consensus 626 ~~~~~~~~~~~--------~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~--~~~~~~---------~~~~~~~~~~~~l 686 (900)
..+..+....+ .....|. ++-+.++.+|.++-......++. ...+.. ...+.+.......
T Consensus 115 sl~~~i~~~~v~e~~i~~~~~~~~Gi-vvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~ 193 (410)
T PF04841_consen 115 SLGEEIEEEKVLECRIFAIWFYKNGI-VVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVE 193 (410)
T ss_pred chhhhccccCcccccccccccCCCCE-EEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceE
Confidence 55443322211 1122443 33455677888765443323221 111110 0011122222333
Q ss_pred EEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC
Q 002615 687 YVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD 743 (900)
Q Consensus 687 ~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d 743 (900)
+....++.++.++... .+. ... ...+...+++++++.+.+-+.+|.+.+.+
T Consensus 194 i~~~~g~~i~~i~~~~--~~~---i~~-~~~i~~iavSpng~~iAl~t~~g~l~v~s 244 (410)
T PF04841_consen 194 ILLANGETIYIIDENS--FKQ---IDS-DGPIIKIAVSPNGKFIALFTDSGNLWVVS 244 (410)
T ss_pred EEEecCCEEEEEEccc--ccc---ccC-CCCeEEEEECCCCCEEEEEECCCCEEEEE
Confidence 3334445555555332 111 111 11234555666666676666677776666
No 482
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=94.43 E-value=0.49 Score=50.28 Aligned_cols=278 Identities=13% Similarity=0.079 Sum_probs=139.6
Q ss_pred EeeCCceEEEEecCCCeEEEEECCCCcEEEEEecCCce-eeceeEe--cCCCEEEEEeeCCEEEEEE-CCCCcEEEEE--
Q 002615 552 VLKDSDIYLFVGSHSHKFICADAKRSSVLWEIKLEGRI-ECSAAVL--ADFSQVVVGCYKGKIYFLD-YLTGDIYWTF-- 625 (900)
Q Consensus 552 ~~~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~-~~~~~~~--~~~~~i~vg~~dg~l~~~d-~~tG~~~w~~-- 625 (900)
.+...+..+..||.+-.+..||-.+++..-.+..+... +...-+. .+...|+..+.||.+..=. ..+|.+..+.
T Consensus 149 ~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl 228 (559)
T KOG1334|consen 149 HFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRL 228 (559)
T ss_pred eecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceec
Confidence 34556778888999999999999888877666544321 1111121 2223455556666553221 1445443221
Q ss_pred -ecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC---Cc---cccCceeecc-CCEEEEEeCCCcEEE
Q 002615 626 -QTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG---GS---IFGSPAIDEV-HDVLYVASTSGRLTA 697 (900)
Q Consensus 626 -~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~---~~---~~~~~~~~~~-~~~l~v~t~~g~l~~ 697 (900)
+..+.+....+...+...++..+.|+.+.-+|+..+.+.-++.+. .. -..+.++++. .+.+.++..+..+..
T Consensus 229 ~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~Rv 308 (559)
T KOG1334|consen 229 APHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARV 308 (559)
T ss_pred ccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhh
Confidence 222333333333334456788888999999998876554333331 11 1122222221 234555555666666
Q ss_pred EEcCCCCce----eeeEeec-----CCcce-eeeeeeeCCCEEEEEeecCcEEEEC---CCCCEE----------ee-ec
Q 002615 698 ISVKALPFH----TLWLHEL-----EVPAF-ASLCITSANRHVICCLVDGHVVALD---SSGSII----------WR-CR 753 (900)
Q Consensus 698 ~~~~~~~g~----~~w~~~~-----~~~~~-~s~~~~~~~~~i~~~~~~g~v~~~d---~~G~~~----------w~-~~ 753 (900)
||......+ .+-++-. ..+.. ...+...+++.+.+.-.+-.+|.|+ ..|... -+ ++
T Consensus 309 YD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYK 388 (559)
T KOG1334|consen 309 YDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYK 388 (559)
T ss_pred hcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhc
Confidence 664321111 0111100 01111 1222333455566665667788887 244111 01 11
Q ss_pred CCCceecccccccc--CCCeEEEEeeCCeEEEEeCCCCceeeEEecCCceecccccccccccccccccCCCeEEEEEcCC
Q 002615 754 TGGPIFAGPCTSFA--LPSQVLICSRNGSIYSFEQESGNLLWEYSVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSS 831 (900)
Q Consensus 754 ~~~~~~~~~~~~~~--~~~~l~~g~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 831 (900)
...+--....+.+. ....+..|+.=|+|+.|+.++|+++-.+.....++...- +.+....++..+-+
T Consensus 389 GHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLE-----------pHP~~PvLAsSGid 457 (559)
T KOG1334|consen 389 GHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLE-----------PHPHLPVLASSGID 457 (559)
T ss_pred ccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccC-----------CCCCCchhhccCCc
Confidence 00000001111111 245788888889999999999998765544433322211 11224456666667
Q ss_pred CcEEEEEee
Q 002615 832 GSIHILRVN 840 (900)
Q Consensus 832 G~v~~~d~~ 840 (900)
-.|.+|-+.
T Consensus 458 ~DVKIWTP~ 466 (559)
T KOG1334|consen 458 HDVKIWTPL 466 (559)
T ss_pred cceeeecCC
Confidence 778888664
No 483
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=94.39 E-value=0.65 Score=54.41 Aligned_cols=131 Identities=18% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCeEEEEECCCCcEEEEEecCCce-eeceeEec-----CCCEEEEEeeCCEEEEEECCC-C-cEEEE----EecCCcee
Q 002615 565 HSHKFICADAKRSSVLWEIKLEGRI-ECSAAVLA-----DFSQVVVGCYKGKIYFLDYLT-G-DIYWT----FQTCGEVK 632 (900)
Q Consensus 565 ~~g~l~~~d~~tG~~~w~~~~~~~~-~~~~~~~~-----~~~~i~vg~~dg~l~~~d~~t-G-~~~w~----~~~~~~~~ 632 (900)
+...||.+|+.+|+++-+...+..+ ....+... .....++|-.+..|++||++- | +++|. +.......
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFS 581 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCce
Confidence 5678999999999997665555433 11111110 124688999899999999875 3 35552 22222222
Q ss_pred eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeecc---CCccccCceeeccCCEEEEEeCCCcEEEEEcC
Q 002615 633 CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPC---GGSIFGSPAIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~---~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
.+....+|.|.+|+.+|.|..||. .|+. -+..+ +.++.. ..+.. +|.-+++|..-.|..++..
T Consensus 582 --~~aTt~~G~iavgs~~G~IRLyd~-~g~~-AKT~lp~lG~pI~~-iDvt~-DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 582 --CFATTEDGYIAVGSNKGDIRLYDR-LGKR-AKTALPGLGDPIIG-IDVTA-DGKWILATCKTYLLLIDTL 647 (794)
T ss_pred --EEEecCCceEEEEeCCCcEEeecc-cchh-hhhcCCCCCCCeeE-EEecC-CCcEEEEeecceEEEEEEe
Confidence 233445799999999999999994 3422 22222 223333 33333 3666677777778888753
No 484
>PRK08172 putative acyl carrier protein IacP; Validated
Probab=94.37 E-value=0.12 Score=41.89 Aligned_cols=66 Identities=9% Similarity=0.141 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcccCC--cccccCCCc-cccCcchHHHHHHHHHh------CCCchhhhcCCCHHHHHHHHHhhc
Q 002615 360 DLLQVIRKAFGHALMV--EEVLHHDNF-FTMGGNSIAAAHVAHNL------GIDMRLIYNFPTPSKLEIALLEKK 425 (900)
Q Consensus 360 ~~~~~~~~~~~~~l~~--~~i~~~~~F-f~lGgdSl~a~~l~~~l------~~~~~~~~~~~t~~~l~~~l~~~~ 425 (900)
++.+.+++++++.|++ ..+..+.+| =++|-|||..+.|...| .++...+.+..|+..+..++..+.
T Consensus 4 ~i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~~ 78 (82)
T PRK08172 4 DIEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSL 78 (82)
T ss_pred cHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHH
Confidence 5677889999999877 468999999 56999999999987655 467778899999999999998754
No 485
>PHA03098 kelch-like protein; Provisional
Probab=94.28 E-value=1.9 Score=49.84 Aligned_cols=130 Identities=15% Similarity=0.188 Sum_probs=63.7
Q ss_pred eEEEEECCCCcEEEEEecC---CceeeceeEecCCCEEE-EEeeC-----CEEEEEECCCCcEEEEEecC--Cce-eeee
Q 002615 568 KFICADAKRSSVLWEIKLE---GRIECSAAVLADFSQVV-VGCYK-----GKIYFLDYLTGDIYWTFQTC--GEV-KCQP 635 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~~~~~~i~-vg~~d-----g~l~~~d~~tG~~~w~~~~~--~~~-~~~~ 635 (900)
.+++||..+++ |..... .+...+.+ ..+ +.|| +|+.+ ..+++||+.++ .|+.... ... ..+.
T Consensus 312 ~v~~yd~~~~~--W~~~~~~~~~R~~~~~~-~~~-~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~lp~~r~~~~~ 385 (534)
T PHA03098 312 SVVSYDTKTKS--WNKVPELIYPRKNPGVT-VFN-NRIYVIGGIYNSISLNTVESWKPGES--KWREEPPLIFPRYNPCV 385 (534)
T ss_pred cEEEEeCCCCe--eeECCCCCcccccceEE-EEC-CEEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCcCcCCccceE
Confidence 58899998766 753221 12222222 233 3455 45443 35888998765 4764221 111 1111
Q ss_pred eEeCCCCEEEE-ecC--C----CeEEEEECCCCeEEEeeccC--CccccCceeeccCCEEEEEe-CC--------CcEEE
Q 002615 636 VVDAPRQLIWC-GSH--D----HNLYALDFRNYRCVYKLPCG--GSIFGSPAIDEVHDVLYVAS-TS--------GRLTA 697 (900)
Q Consensus 636 ~~~~~~~~i~~-gs~--d----g~l~~~d~~~g~~~w~~~~~--~~~~~~~~~~~~~~~l~v~t-~~--------g~l~~ 697 (900)
+.. ++.||+ |+. + ..+++||+.+++ |..... .......+... ++.||+.+ .+ ..+++
T Consensus 386 ~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~ 460 (534)
T PHA03098 386 VNV--NNLIYVIGGISKNDELLKTVECFSLNTNK--WSKGSPLPISHYGGCAIYH-DGKIYVIGGISYIDNIKVYNIVES 460 (534)
T ss_pred EEE--CCEEEEECCcCCCCcccceEEEEeCCCCe--eeecCCCCccccCceEEEE-CCEEEEECCccCCCCCcccceEEE
Confidence 222 355665 432 1 358899988754 654221 11111122222 36666643 21 13788
Q ss_pred EEcCCCCceeeeEee
Q 002615 698 ISVKALPFHTLWLHE 712 (900)
Q Consensus 698 ~~~~~~~g~~~w~~~ 712 (900)
||+.+ ..|+.-
T Consensus 461 yd~~~----~~W~~~ 471 (534)
T PHA03098 461 YNPVT----NKWTEL 471 (534)
T ss_pred ecCCC----CceeeC
Confidence 88775 357653
No 486
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.18 E-value=4.1 Score=46.94 Aligned_cols=196 Identities=13% Similarity=0.076 Sum_probs=93.8
Q ss_pred eCCceEEEEecCCCeEEEEECCCCcEEEEEec-CCceeeceeEecCCCEEEEEeeC-C----EEEEEECCCC---c-E--
Q 002615 554 KDSDIYLFVGSHSHKFICADAKRSSVLWEIKL-EGRIECSAAVLADFSQVVVGCYK-G----KIYFLDYLTG---D-I-- 621 (900)
Q Consensus 554 ~~~~~~v~igs~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~i~vg~~d-g----~l~~~d~~tG---~-~-- 621 (900)
....+.|++|+.+|.|..+|.. =+....+.. ...+....-..++...++.-..| + .|..||++.- . +
T Consensus 32 ~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c 110 (933)
T KOG2114|consen 32 SSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQC 110 (933)
T ss_pred cCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcce
Confidence 3457889999999999998843 222222222 12222222222332344433333 2 4566664321 1 1
Q ss_pred E---EEEe----cCCceeeeeeEeCCCCEEEEecCCCeEEEEECC----CCe-EEEeeccCCccccCceeeccCCE-EEE
Q 002615 622 Y---WTFQ----TCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFR----NYR-CVYKLPCGGSIFGSPAIDEVHDV-LYV 688 (900)
Q Consensus 622 ~---w~~~----~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~----~g~-~~w~~~~~~~~~~~~~~~~~~~~-l~v 688 (900)
. -.+. +.....++.++..+-..|++|-.+|.|+++.-+ .|. ........+++. ...+..++.. +++
T Consensus 111 ~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pIT-gL~~~~d~~s~lFv 189 (933)
T KOG2114|consen 111 LYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPIT-GLALRSDGKSVLFV 189 (933)
T ss_pred eeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCce-eeEEecCCceeEEE
Confidence 1 1111 123344556666667789999999999998421 121 111122223333 3333332333 677
Q ss_pred EeCCCcEEEEEcCCCCceeeeE-eecCCcceeeeeeeeCCCEEEEEeecCcEEEECCCC-CEEeeecCC
Q 002615 689 ASTSGRLTAISVKALPFHTLWL-HELEVPAFASLCITSANRHVICCLVDGHVVALDSSG-SIIWRCRTG 755 (900)
Q Consensus 689 ~t~~g~l~~~~~~~~~g~~~w~-~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G-~~~w~~~~~ 755 (900)
+|... +..|.+... + +.-. .+..+-............. ++++.+..++.|+.+| .+-|.+..+
T Consensus 190 ~Tt~~-V~~y~l~gr-~-p~~~~ld~~G~~lnCss~~~~t~q-fIca~~e~l~fY~sd~~~~cfaf~~g 254 (933)
T KOG2114|consen 190 ATTEQ-VMLYSLSGR-T-PSLKVLDNNGISLNCSSFSDGTYQ-FICAGSEFLYFYDSDGRGPCFAFEVG 254 (933)
T ss_pred Eecce-eEEEEecCC-C-cceeeeccCCccceeeecCCCCcc-EEEecCceEEEEcCCCcceeeeecCC
Confidence 77654 777776631 1 2222 2222221112222211222 3344456788888444 344666543
No 487
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=94.02 E-value=13 Score=41.90 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=37.1
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCe
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYR 662 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~ 662 (900)
.+++|..||.|..|..+.......+..++..+....+.+....+.+.+.|+.++.||.+.-+
T Consensus 71 ~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e 132 (764)
T KOG1063|consen 71 EMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDE 132 (764)
T ss_pred eEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCc
Confidence 68999999988888877444444444444222222233222222233578999999986555
No 488
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=93.89 E-value=0.84 Score=47.47 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=52.5
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEEe
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSIIW 750 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~w 750 (900)
.+....++.+++..|+.+..+..|.+..... --.+-.+-.+...|.+.....++..++.++.|++++.|| .+|+.+.
T Consensus 152 Sml~dVavS~D~~~IitaDRDEkIRvs~ypa--~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~ 229 (390)
T KOG3914|consen 152 SMLLDVAVSPDDQFIITADRDEKIRVSRYPA--TFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLLD 229 (390)
T ss_pred hhhheeeecCCCCEEEEecCCceEEEEecCc--ccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCccc
Confidence 4455566677677888888888888766543 122333334333343333334556689999999999999 9999885
Q ss_pred eec
Q 002615 751 RCR 753 (900)
Q Consensus 751 ~~~ 753 (900)
.+.
T Consensus 230 t~d 232 (390)
T KOG3914|consen 230 TCD 232 (390)
T ss_pred ccc
Confidence 554
No 489
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=93.87 E-value=0.29 Score=56.04 Aligned_cols=186 Identities=15% Similarity=0.233 Sum_probs=102.9
Q ss_pred ceEEEEecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcEEE--EEecCCceeee
Q 002615 557 DIYLFVGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYW--TFQTCGEVKCQ 634 (900)
Q Consensus 557 ~~~v~igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w--~~~~~~~~~~~ 634 (900)
...+++.+-| .+.+.+..+|.+.|...-..-+. ++.-... --..-+-.+|.+|.+-- +.-+. .+.....+..+
T Consensus 27 e~~~~~stid-~l~a~s~~~g~~~~~l~~~pvv~-~~~~~~~-~~fl~~p~dgsly~l~~--~~sL~Klpftipelv~~~ 101 (903)
T KOG1027|consen 27 ENLLLVSTID-SLHAPSSETGFIKWTLSDDPVVA-SPDGVLQ-PAFLPDPRDGSLYTLGN--NLSLTKLPFTIPELVNAS 101 (903)
T ss_pred cccccccccc-cccCccccccceeeeeccCcccc-CCccccc-cccCCCccccceeeccC--CCccccCCccchhhhccC
Confidence 3556666667 68888889999999865332111 1110000 00111234566665432 22222 23333344445
Q ss_pred eeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecC
Q 002615 635 PVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELE 714 (900)
Q Consensus 635 ~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~ 714 (900)
|+-. .+|.+|+|+.++..|.+|+++|+..|.++...++ ...+|.+-.+.++..+|.++ -...|.....
T Consensus 102 pcrs-sdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~~~---------~~~v~~grt~ytv~m~d~~~--~~~~wn~t~~ 169 (903)
T KOG1027|consen 102 PCRS-SDGILYSGSKQDIWYLVDPKTGEIDYTFNTAEPI---------KQLVYLGRTNYTVTMYDKNV--RGKTWNTTFG 169 (903)
T ss_pred cccC-CCCeEEecccccceEEecCCccceeEEEecCCcc---------hhheecccceeEEecccCcc--cCceeecccc
Confidence 5444 5799999999999999999999999998876632 24556665555566666444 3344544333
Q ss_pred CcceeeeeeeeCCCE-EEEEeecCcEEEEC-CCCCEEeeecCCCcee
Q 002615 715 VPAFASLCITSANRH-VICCLVDGHVVALD-SSGSIIWRCRTGGPIF 759 (900)
Q Consensus 715 ~~~~~s~~~~~~~~~-i~~~~~~g~v~~~d-~~G~~~w~~~~~~~~~ 759 (900)
......+.......+ -+..+.+|.+..+| ..|+.+|.-+...+++
T Consensus 170 dy~a~~~~~~~~~~~~~~~~~~~g~i~t~D~~~g~~~~~q~~~spvv 216 (903)
T KOG1027|consen 170 DYSAQYPSGVRGEKMSHFHSLGNGYIVTVDSESGEKLWLQDLLSPVV 216 (903)
T ss_pred chhccCCCccCCceeEEEeecCCccEEeccCcccceeeccccCCceE
Confidence 211111111111111 12222367788889 8899999877655544
No 490
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=93.77 E-value=0.95 Score=53.10 Aligned_cols=142 Identities=13% Similarity=0.170 Sum_probs=84.9
Q ss_pred CCEEEEe-cCCCeEEEEECCCCeEEEeeccCCcc--cc-Ccee---eccCCEEEEEeCCCcEEEEEcCCCCceeeeEee-
Q 002615 641 RQLIWCG-SHDHNLYALDFRNYRCVYKLPCGGSI--FG-SPAI---DEVHDVLYVASTSGRLTAISVKALPFHTLWLHE- 712 (900)
Q Consensus 641 ~~~i~~g-s~dg~l~~~d~~~g~~~w~~~~~~~~--~~-~~~~---~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~- 712 (900)
...|+.. .....||.+|++.|+++-.++.+..+ .. .|.. .-.+...++|-.+..|+.+|++-...+++|...
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 3444443 35678999999999998555554322 11 1110 001356788888889999999864334555321
Q ss_pred --cCCcceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEe-eec-CCCceeccccccccCCCeEEEEeeCCeEEEEeC
Q 002615 713 --LEVPAFASLCITSANRHVICCLVDGHVVALDSSGSIIW-RCR-TGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQ 786 (900)
Q Consensus 713 --~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w-~~~-~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~ 786 (900)
.....|++ .....+|.|.+|+.+|.|..||..|+..- .++ .+.||.... ...+|.-+++|-+-.|..++.
T Consensus 573 ~Y~~~~~Fs~-~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iD---vt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 573 QYSSKNNFSC-FATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGID---VTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred ccccCCCceE-EEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEE---ecCCCcEEEEeecceEEEEEE
Confidence 12333443 34456899999999999999996564311 111 233444332 334666666666677777764
No 491
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.75 E-value=7.1 Score=37.92 Aligned_cols=41 Identities=17% Similarity=0.373 Sum_probs=32.5
Q ss_pred ccCCCeEEEEeeC-CeEEEEeCCCCceeeEEecCCceecccc
Q 002615 766 FALPSQVLICSRN-GSIYSFEQESGNLLWEYSVGDPITASAY 806 (900)
Q Consensus 766 ~~~~~~l~~g~~d-g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 806 (900)
.+.+|+||+++.+ |.|+.+|+.||+++-++.++.+-+++.+
T Consensus 219 ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitscc 260 (310)
T KOG4499|consen 219 IDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCC 260 (310)
T ss_pred EccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEE
Confidence 4568899999875 5799999999999999888866544433
No 492
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=93.67 E-value=0.72 Score=46.91 Aligned_cols=147 Identities=13% Similarity=0.225 Sum_probs=90.0
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCCEEEEEECCCCcE--EE---EEecCCceeeeee
Q 002615 562 VGSHSHKFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKGKIYFLDYLTGDI--YW---TFQTCGEVKCQPV 636 (900)
Q Consensus 562 igs~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~--~w---~~~~~~~~~~~~~ 636 (900)
+|... .+...|..||-... +.....+ .+.-+...++.++.||.+|.|+.+|+..+.. .| .+-.+..+.+.-+
T Consensus 230 ~G~sq-qv~L~nvetg~~qs-f~sksDV-fAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~ 306 (425)
T KOG2695|consen 230 VGLSQ-QVLLTNVETGHQQS-FQSKSDV-FALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQI 306 (425)
T ss_pred ccccc-eeEEEEeecccccc-cccchhH-HHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhh
Confidence 34434 47778888876442 3333222 1334445457899999999999999887522 23 3333445544444
Q ss_pred EeCCCCEEEEecCCCeEEEEECCCCeE---EEeeccCCcc--ccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEe
Q 002615 637 VDAPRQLIWCGSHDHNLYALDFRNYRC---VYKLPCGGSI--FGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLH 711 (900)
Q Consensus 637 ~~~~~~~i~~gs~dg~l~~~d~~~g~~---~w~~~~~~~~--~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~ 711 (900)
+.-++..+.+.+.+|.|..||..--++ +..+..+.+. ....-+.+.++.|+.+..|-....|.++. |..+-+.
T Consensus 307 Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~--ghLl~ti 384 (425)
T KOG2695|consen 307 LQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDS--GHLLCTI 384 (425)
T ss_pred hccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEeccc--Cceeecc
Confidence 443567788888899999999865444 4444332211 11223445567788877788777888776 7666554
Q ss_pred ec
Q 002615 712 EL 713 (900)
Q Consensus 712 ~~ 713 (900)
..
T Consensus 385 pf 386 (425)
T KOG2695|consen 385 PF 386 (425)
T ss_pred CC
Confidence 33
No 493
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=93.64 E-value=0.23 Score=56.17 Aligned_cols=106 Identities=11% Similarity=0.017 Sum_probs=69.8
Q ss_pred ceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCC
Q 002615 592 SAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGG 671 (900)
Q Consensus 592 ~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~ 671 (900)
++++...+.+|+.|+.|-.+..|..+|+..+-....+..-+....+...+-.+..+|.|..|.+|-+.+|.++-....+.
T Consensus 195 ca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrght 274 (1113)
T KOG0644|consen 195 CAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHT 274 (1113)
T ss_pred eeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccc
Confidence 56777778899999999989999999988876665554444444444434446668889889999988887765544332
Q ss_pred ccccCceeeccCCEEEEEeCCCcEEEEEcC
Q 002615 672 SIFGSPAIDEVHDVLYVASTSGRLTAISVK 701 (900)
Q Consensus 672 ~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~ 701 (900)
.-..+..+.+ .. ..+.+|.+..||..
T Consensus 275 gavtaiafsP--~~--sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 275 GAVTAIAFSP--RA--SSSDDGTCRIWDAR 300 (1113)
T ss_pred cceeeeccCc--cc--cCCCCCceEecccc
Confidence 2222233332 11 34567878777754
No 494
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=93.60 E-value=0.52 Score=53.66 Aligned_cols=44 Identities=16% Similarity=0.367 Sum_probs=38.4
Q ss_pred EecCceEEEc----cCCcEEEEcccCCcEEECceeeChHHHHHHHhCC
Q 002615 220 FRTGDFARRI----QSGDLVFLGRKDRTIKINGQRMALEEIEHTLRGH 263 (900)
Q Consensus 220 ~~TGDl~~~~----~~G~l~~~GR~dd~ik~~G~rv~~~~iE~~l~~~ 263 (900)
||.||+++.. ..-.+.|++|.+.+..+.|++++-.++..++.+.
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 8999999974 3357999999999999999999999998888763
No 495
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=93.41 E-value=0.62 Score=57.65 Aligned_cols=175 Identities=13% Similarity=0.167 Sum_probs=102.0
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCCcee-eeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccCCccccCcee
Q 002615 601 QVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVK-CQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCGGSIFGSPAI 679 (900)
Q Consensus 601 ~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~-~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~ 679 (900)
+-+.|+.||.+..|.-..|+.+-.+.+.+..+ +...+...++..-++..||.|-.|... -++.-..+++..-.
T Consensus 2222 ~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~----- 2295 (2439)
T KOG1064|consen 2222 YYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKAL----- 2295 (2439)
T ss_pred eEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccc-----
Confidence 44567889988888877777665555544332 233344455666666777877777654 23333333332211
Q ss_pred eccCCEEEEE---------eCCCcEEEEEcCCCCceeeeEeecCCcceeeeeeeeCCCEEEEEeecCcEEEEC-CCCCEE
Q 002615 680 DEVHDVLYVA---------STSGRLTAISVKALPFHTLWLHELEVPAFASLCITSANRHVICCLVDGHVVALD-SSGSII 749 (900)
Q Consensus 680 ~~~~~~l~v~---------t~~g~l~~~~~~~~~g~~~w~~~~~~~~~~s~~~~~~~~~i~~~~~~g~v~~~d-~~G~~~ 749 (900)
.+..+++ +.++.+..||..-..+.-+-. .++..........+....++.|+.+|.++.|| ..-+++
T Consensus 2296 ---~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~ 2371 (2439)
T KOG1064|consen 2296 ---SDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLR 2371 (2439)
T ss_pred ---cceeeeehhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHH
Confidence 1233333 245677777755322221211 33333334445566677889999999999999 665665
Q ss_pred eeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEEe
Q 002615 750 WRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEYS 796 (900)
Q Consensus 750 w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~~ 796 (900)
.+++. .+....+..|+..|.+..|+...-.++.+++
T Consensus 2372 h~~~~-----------~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2372 HTFQA-----------LDTREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred HHhhh-----------hhhhheeeccCcccceEEEEccccchhhcCc
Confidence 44432 1134567777888888888877655555443
No 496
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=93.26 E-value=16 Score=40.55 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=105.9
Q ss_pred eEEEEECCCCcEEEEEecCCceeeceeEecCCCEEEEEeeCC-----------EEEEEECCCCc----EEEEEecCCcee
Q 002615 568 KFICADAKRSSVLWEIKLEGRIECSAAVLADFSQVVVGCYKG-----------KIYFLDYLTGD----IYWTFQTCGEVK 632 (900)
Q Consensus 568 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~vg~~dg-----------~l~~~d~~tG~----~~w~~~~~~~~~ 632 (900)
.|+.+|..+|+.+-.. .......++...+++..+|....+. .||++...++. +++.-..+....
T Consensus 151 ~l~v~Dl~tg~~l~d~-i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~ 229 (414)
T PF02897_consen 151 TLRVFDLETGKFLPDG-IENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWF 229 (414)
T ss_dssp EEEEEETTTTEEEEEE-EEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSE
T ss_pred EEEEEECCCCcCcCCc-ccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEE
Confidence 5999999999876432 1111111267778766665554332 37888877663 333322222213
Q ss_pred eeeeEeCCCCEEEEecC---C-CeEEEEECCCC---eEEEee--ccCCccccCceeeccCCEEEEEeC----CCcEEEEE
Q 002615 633 CQPVVDAPRQLIWCGSH---D-HNLYALDFRNY---RCVYKL--PCGGSIFGSPAIDEVHDVLYVAST----SGRLTAIS 699 (900)
Q Consensus 633 ~~~~~~~~~~~i~~gs~---d-g~l~~~d~~~g---~~~w~~--~~~~~~~~~~~~~~~~~~l~v~t~----~g~l~~~~ 699 (900)
.....+.++..+++.+. + ..+|.+|..++ ...|+. .-....... +...++.+|+-|. ++.|+.++
T Consensus 230 ~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~--v~~~~~~~yi~Tn~~a~~~~l~~~~ 307 (414)
T PF02897_consen 230 VSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYY--VDHHGDRLYILTNDDAPNGRLVAVD 307 (414)
T ss_dssp EEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEE--EEEETTEEEEEE-TT-TT-EEEEEE
T ss_pred EEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEE--EEccCCEEEEeeCCCCCCcEEEEec
Confidence 33445556677666422 2 45888888775 222221 111111111 2222577888764 46888888
Q ss_pred cCCCCceeeeEee-cC-CcceeeeeeeeCCCEEEEEeecC---cEEEECCC-CCEEeeecCCCceeccccccccCCCeEE
Q 002615 700 VKALPFHTLWLHE-LE-VPAFASLCITSANRHVICCLVDG---HVVALDSS-GSIIWRCRTGGPIFAGPCTSFALPSQVL 773 (900)
Q Consensus 700 ~~~~~g~~~w~~~-~~-~~~~~s~~~~~~~~~i~~~~~~g---~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~~~~~~l~ 773 (900)
+++..- .-|... .. .....-..+...++.+++....+ .|.+++.. +.......................+.++
T Consensus 308 l~~~~~-~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~ 386 (414)
T PF02897_consen 308 LADPSP-AEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELR 386 (414)
T ss_dssp TTSTSG-GGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEE
T ss_pred cccccc-ccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEE
Confidence 876221 124321 11 11111112222355555554333 45666744 5555554433221101101122344555
Q ss_pred EEee----CCeEEEEeCCCCcee
Q 002615 774 ICSR----NGSIYSFEQESGNLL 792 (900)
Q Consensus 774 ~g~~----dg~l~~~d~~tG~~~ 792 (900)
+.-. -+.+|.+|.++|+..
T Consensus 387 ~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 387 FSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp EEEEETTEEEEEEEEETTTTCEE
T ss_pred EEEeCCCCCCEEEEEECCCCCEE
Confidence 5432 357999999999863
No 497
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=93.20 E-value=15 Score=40.08 Aligned_cols=134 Identities=12% Similarity=0.150 Sum_probs=66.6
Q ss_pred CEEEEEeecCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCce----eeEE-ecCC---
Q 002615 728 RHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNL----LWEY-SVGD--- 799 (900)
Q Consensus 728 ~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~----~w~~-~~~~--- 799 (900)
+.+++.+..|.++.-...|...|+............+....++.+|+.+.+|.++.-+ ..|+. .|.. ....
T Consensus 250 G~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~-d~G~~~~~~~f~~~~~~~~~~ 328 (398)
T PLN00033 250 GDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYVSK-GTGLTEEDFDFEEADIKSRGF 328 (398)
T ss_pred CCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEEec-CCCCcccccceeecccCCCCc
Confidence 4444444455555544556655653221111111112234567889888888877654 44531 2221 1111
Q ss_pred ceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeec----cCCccccCce-ee
Q 002615 800 PITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLE----LQGDIFSSPV-MI 874 (900)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ss~~-~~ 874 (900)
.++...+. +++.+|+++.+|.++... ..| +.|.... .+.+.. ... ..
T Consensus 329 ~l~~v~~~-------------~d~~~~a~G~~G~v~~s~-D~G-------------~tW~~~~~~~~~~~~ly-~v~f~~ 380 (398)
T PLN00033 329 GILDVGYR-------------SKKEAWAAGGSGILLRST-DGG-------------KSWKRDKGADNIAANLY-SVKFFD 380 (398)
T ss_pred ceEEEEEc-------------CCCcEEEEECCCcEEEeC-CCC-------------cceeEccccCCCCccee-EEEEcC
Confidence 11111111 266778888888666553 222 3333322 222222 222 34
Q ss_pred CCEEEEeeeCCeEEEE
Q 002615 875 GGRVFVGCRDDYIYCI 890 (900)
Q Consensus 875 ~~~l~vg~~dg~l~~l 890 (900)
+++.|+...+|.|..+
T Consensus 381 ~~~g~~~G~~G~il~~ 396 (398)
T PLN00033 381 DKKGFVLGNDGVLLRY 396 (398)
T ss_pred CCceEEEeCCcEEEEe
Confidence 5899999999988766
No 498
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=93.17 E-value=0.65 Score=50.06 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=66.0
Q ss_pred eceeEecCCCEEEEEeeCCEEEEEECCCCcEEEEEecCCceeeeeeEeCCCCEEEEecCCCeEEEEECCCCeEEEeeccC
Q 002615 591 CSAAVLADFSQVVVGCYKGKIYFLDYLTGDIYWTFQTCGEVKCQPVVDAPRQLIWCGSHDHNLYALDFRNYRCVYKLPCG 670 (900)
Q Consensus 591 ~~~~~~~~~~~i~vg~~dg~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~i~~gs~dg~l~~~d~~~g~~~w~~~~~ 670 (900)
...++++|+.++.+-+.||.|..||..+-+++-.++.--.-..+..+.+++.+|++|..|.-|.+|....++++-+-+.+
T Consensus 294 n~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGH 373 (636)
T KOG2394|consen 294 NEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGH 373 (636)
T ss_pred cceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEecccc
Confidence 35678899999999999999999998876664322211111234567889999999999999999999988888665555
Q ss_pred CccccCceee
Q 002615 671 GSIFGSPAID 680 (900)
Q Consensus 671 ~~~~~~~~~~ 680 (900)
....+..+++
T Consensus 374 kSWVs~VaFD 383 (636)
T KOG2394|consen 374 KSWVSVVAFD 383 (636)
T ss_pred ccceeeEeec
Confidence 5555555554
No 499
>PRK13684 Ycf48-like protein; Provisional
Probab=93.14 E-value=14 Score=39.53 Aligned_cols=217 Identities=12% Similarity=0.114 Sum_probs=96.7
Q ss_pred EEEecCCCeEEEEECCCCeEEEeecc-----CCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCceeeeEeecCCc--
Q 002615 644 IWCGSHDHNLYALDFRNYRCVYKLPC-----GGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPFHTLWLHELEVP-- 716 (900)
Q Consensus 644 i~~gs~dg~l~~~d~~~g~~~w~~~~-----~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g~~~w~~~~~~~-- 716 (900)
.|+....+.|+. ..++-.-|+... .+..+....+. .+.+++.+..|.++.-+ + +-..|+......
T Consensus 102 ~~~~G~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~--~~~~~~~g~~G~i~~S~--D--gG~tW~~~~~~~~g 173 (334)
T PRK13684 102 GWIVGQPSLLLH--TTDGGKNWTRIPLSEKLPGSPYLITALG--PGTAEMATNVGAIYRTT--D--GGKNWEALVEDAAG 173 (334)
T ss_pred EEEeCCCceEEE--ECCCCCCCeEccCCcCCCCCceEEEEEC--CCcceeeeccceEEEEC--C--CCCCceeCcCCCcc
Confidence 455545555554 344555565432 12222211122 34566666677665432 2 556777533211
Q ss_pred ceeeeeeeeCCCEEEEEeecCcEEEECCCCCEEeeecCCCceeccccccccCCCeEEEEeeCCeEEEEeCCCCceeeEE-
Q 002615 717 AFASLCITSANRHVICCLVDGHVVALDSSGSIIWRCRTGGPIFAGPCTSFALPSQVLICSRNGSIYSFEQESGNLLWEY- 795 (900)
Q Consensus 717 ~~~s~~~~~~~~~i~~~~~~g~v~~~d~~G~~~w~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~l~~~d~~tG~~~w~~- 795 (900)
.+....... ++.+++.+..|.++.-..+|...|+............+....++.+|+....|.++ +...++-..|+.
T Consensus 174 ~~~~i~~~~-~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~-~~s~d~G~sW~~~ 251 (334)
T PRK13684 174 VVRNLRRSP-DGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIR-FNDPDDLESWSKP 251 (334)
T ss_pred eEEEEEECC-CCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEE-EccCCCCCccccc
Confidence 122233333 34455555566666543344445654322111111111233456777777777554 422334456763
Q ss_pred ecCCceecccccccccccccccccCCCeEEEEEcCCCcEEEEEeecCcccccccccccceeeeeeec----cCCccccCc
Q 002615 796 SVGDPITASAYIDEHLQLKLESCLSIDRLVCICTSSGSIHILRVNLDVTGKENQSKDHMVQEFAKLE----LQGDIFSSP 871 (900)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~G~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ss~ 871 (900)
..+.......+.. .... .++.+|++..+|.++.- .+.| +.|.... ++.......
T Consensus 252 ~~~~~~~~~~l~~-------v~~~-~~~~~~~~G~~G~v~~S-~d~G-------------~tW~~~~~~~~~~~~~~~~~ 309 (334)
T PRK13684 252 IIPEITNGYGYLD-------LAYR-TPGEIWAGGGNGTLLVS-KDGG-------------KTWEKDPVGEEVPSNFYKIV 309 (334)
T ss_pred cCCccccccceee-------EEEc-CCCCEEEEcCCCeEEEe-CCCC-------------CCCeECCcCCCCCcceEEEE
Confidence 2211100000000 0001 14457777778866532 2222 2222221 111122222
Q ss_pred eeeCCEEEEeeeCCeEEEEEc
Q 002615 872 VMIGGRVFVGCRDDYIYCIAL 892 (900)
Q Consensus 872 ~~~~~~l~vg~~dg~l~~ld~ 892 (900)
...++..|+....|.|..++.
T Consensus 310 ~~~~~~~~~~G~~G~il~~~~ 330 (334)
T PRK13684 310 FLDPEKGFVLGQRGVLLRYVG 330 (334)
T ss_pred EeCCCceEEECCCceEEEecC
Confidence 235788888888898888764
No 500
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=93.13 E-value=5 Score=41.42 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=90.8
Q ss_pred EecCCCeEEEEECCCCcEEEEEec-CCceeeceeEec-CCCEEEEEeeCCEEEEEECC-CCcEEE-----------EEec
Q 002615 562 VGSHSHKFICADAKRSSVLWEIKL-EGRIECSAAVLA-DFSQVVVGCYKGKIYFLDYL-TGDIYW-----------TFQT 627 (900)
Q Consensus 562 igs~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~-~~~~i~vg~~dg~l~~~d~~-tG~~~w-----------~~~~ 627 (900)
+++.|..|..||.++ +.--..+. ..+...+...-+ .+..+.|||..| |..|... ++..-- .++.
T Consensus 115 va~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~ 192 (445)
T KOG2139|consen 115 VATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQD 192 (445)
T ss_pred hhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeC
Confidence 445566677777665 22212211 112223334433 334688888766 5556422 221110 0111
Q ss_pred CC-ceeeeeeEeCCCCEEEEecC-CCeEEEEECCCCeEEEeeccCCccccCceeeccCCEEEEEeCCCcEEEEEcCCCCc
Q 002615 628 CG-EVKCQPVVDAPRQLIWCGSH-DHNLYALDFRNYRCVYKLPCGGSIFGSPAIDEVHDVLYVASTSGRLTAISVKALPF 705 (900)
Q Consensus 628 ~~-~~~~~~~~~~~~~~i~~gs~-dg~l~~~d~~~g~~~w~~~~~~~~~~~~~~~~~~~~l~v~t~~g~l~~~~~~~~~g 705 (900)
++ ..+.+....+++..+..++. +..+..||+.+|..+--...+..-++-...+++++.++.++-++....|+.+..--
T Consensus 193 pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt 272 (445)
T KOG2139|consen 193 PGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWT 272 (445)
T ss_pred CCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccce
Confidence 11 22344445555555555554 46799999999876543333333344445566788999999999888885443111
Q ss_pred eeeeEeecCCcceeeeeeeeCCCEEEE-EeecCcEEEEC
Q 002615 706 HTLWLHELEVPAFASLCITSANRHVIC-CLVDGHVVALD 743 (900)
Q Consensus 706 ~~~w~~~~~~~~~~s~~~~~~~~~i~~-~~~~g~v~~~d 743 (900)
+..|... .....+.+..+.+..+.. ++..-.+|.+.
T Consensus 273 ~erw~lg--sgrvqtacWspcGsfLLf~~sgsp~lysl~ 309 (445)
T KOG2139|consen 273 KERWILG--SGRVQTACWSPCGSFLLFACSGSPRLYSLT 309 (445)
T ss_pred ecceecc--CCceeeeeecCCCCEEEEEEcCCceEEEEe
Confidence 2333322 223344455555555433 33444555544
Done!