BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002617
(900 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/765 (48%), Positives = 486/765 (63%), Gaps = 20/765 (2%)
Query: 145 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFF 203
FE + FG GA ++N E +L + L+ +PN G + CNSW+++ K+ R+FF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 204 TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARP 263
N YLPS TP L +YR EE +LRG+G G+RK +DRIYDYDVYNDLG+PD RP
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRP 228
Query: 264 VLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLH 322
+LGG PYP R RTGR R TD SEK G YVPRDE F +K F + S+ H
Sbjct: 229 ILGGCSIYPYPLRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSH 287
Query: 323 ALVPSLETAFVDPDLG---FPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIED 377
++P ++A + F F + +L+ G+ LP L Q + LP L +
Sbjct: 288 DVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRT 343
Query: 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 437
G+N+L F P K DEEF+R+ +AG+NP IR + E+P KSTLDP +YG
Sbjct: 344 DGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQ 403
Query: 438 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 497
S IT E +E +GG ++VEEA+ ++LFILDY D F+PY+ ++ L + Y +RTI F
Sbjct: 404 TSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILF 462
Query: 498 LTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 555
L GTL+P+AIEL++P +G + V LP+ + +W LAKAHV+ +D+GYHQL
Sbjct: 463 LKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQL 522
Query: 556 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 615
VSHWL TH EP+ IATNR LSV+HPIY+LL PH+R T+ INGLARQ+L+NADGIIE S
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKS 582
Query: 616 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGL 675
F PGKYS+E SS Y K W F H+ALP DL+ RGLA+EDPSAPHGL+L IEDYP+A DGL
Sbjct: 583 FLPGKYSIEMSSSVY-KNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGL 641
Query: 676 DLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDL 735
++WDAIK WV +YV+ YYP + V+ D ELQAWW E GHGD K +PWWP +T +DL
Sbjct: 642 EIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDL 701
Query: 736 IEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA 795
I+ + IVW S HAAVNFGQY YGG NRPT AR I E ++ ++ P+ A
Sbjct: 702 IQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKA 759
Query: 796 LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 855
L T + + ++++++LS H+ DE YLG+ P W D AF++F KL +E
Sbjct: 760 YLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIE 819
Query: 856 GIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
G I+ARN+DP LRNR G +PY LL SE G+T KG+P SISI
Sbjct: 820 GKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/768 (47%), Positives = 493/768 (64%), Gaps = 17/768 (2%)
Query: 141 YESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQK 199
Y+++F+ S FG GA ++N E YLK ++L+ +PN G ++ CNSW+++ K
Sbjct: 95 YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 200 RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE 259
R+FF N YLPS+TP L +YR EEL +RG+G GERK +DRIYDYDVYNDLGDPDK +
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 260 LARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYS 319
ARPVLGG PYPRR RTGR + D SEK Y+PRDEAF +K F A + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 320 VLHALVPSLETAFVDP--DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLVKAI 375
V ++P L AF L F F+ + L+ GV LP F + + +P + +
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLP----TNFLSNITPIPIIKELF 330
Query: 376 EDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYG 435
G+ L + P+ M DK W DEEF+R+T+AGLNP I++I E+PL S LD + YG
Sbjct: 331 RTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYG 390
Query: 436 PPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTI 495
IT E +E +GG+ +VE+AI+ KKLFILD+HD +PY+ K+ +T Y +RTI
Sbjct: 391 DHTCIITKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTI 448
Query: 496 FFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYH 553
FFL GTL P+AIEL++P G+ +V++PS E ++W LAKA+V+ +DA YH
Sbjct: 449 FFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYH 508
Query: 554 QLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIE 613
Q++SHWL TH EP+VIATNR LSV+HPIY+LL PH+R TM IN LAR++LVNADGIIE
Sbjct: 509 QIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIE 568
Query: 614 SSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFAND 673
+F G+YS+E S+V Y K W F +ALP DL+ RG+AV+DPSAPHG++L IEDYP+A+D
Sbjct: 569 KTFLWGRYSLEMSAVIY-KDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASD 627
Query: 674 GLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPK 733
GL++WDAIK WV +YV+ YY ++ D ELQAWW E+ VGHGD K +PWW ++T +
Sbjct: 628 GLEIWDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTRE 687
Query: 734 DLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPE 793
+L+E T++W+ S HAAVNFGQY YGG NRPT +R + + ++ + PE
Sbjct: 688 ELVEASATLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMP--EKGSPEYDALAKNPE 745
Query: 794 NALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLM 852
L T + + + I+++LS H+ DE YLG ++ W D AF++F L
Sbjct: 746 KEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLE 805
Query: 853 ELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
E+E + +N D LRNR G +PY LL P SE G+T +G+P SISI
Sbjct: 806 EIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/800 (45%), Positives = 495/800 (61%), Gaps = 20/800 (2%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVM 580
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSHWL TH EP++IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVV 540
Query: 581 HPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEA 640
HPIY+LL PH+R TM INGLAR +LVN G+IE +F G+YS+E S+V Y K W F +A
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQA 599
Query: 641 LPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVE 700
LP DLI RG+A+EDPS PHG++L IEDYP+ DGL++WDAIK WV +YV YY +
Sbjct: 600 LPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLR 659
Query: 701 SDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTY 760
D ELQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HAAVNFGQY Y
Sbjct: 660 EDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPY 719
Query: 761 GGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHS 820
GG NRPT +R + + +++ + P+ A L T + Q ++++++LS H+
Sbjct: 720 GGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHA 777
Query: 821 PDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYEL 880
DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY L
Sbjct: 778 SDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTL 837
Query: 881 LKPFSEPGVTGKGVPYSISI 900
L P S+ G+T +G+P SISI
Sbjct: 838 LLPSSKEGLTFRGIPNSISI 857
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GI+E++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GI+E++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFG+Y YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YH+L+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 480/775 (61%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GI E++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 481/775 (62%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAV+FGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 480/775 (61%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFG Y YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 480/775 (61%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YH L+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 480/775 (61%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAV FGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/800 (45%), Positives = 493/800 (61%), Gaps = 20/800 (2%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVM 580
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSH L TH EP++IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVV 540
Query: 581 HPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEA 640
HPIY+LL PH+R TM INGLAR + VN G+IE +F G+YS+E S+V Y K W F +A
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQA 599
Query: 641 LPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVE 700
LP DLI RG+A+EDPS PHG++L IEDYP+ DGL++WDAIK WV +YV YY +
Sbjct: 600 LPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWVHEYVFLYYKSDDTLR 659
Query: 701 SDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTY 760
D ELQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HAAVNFGQY Y
Sbjct: 660 EDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPY 719
Query: 761 GGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHS 820
GG NRPT +R + + +++ + P+ A L T + Q ++++++LS H+
Sbjct: 720 GGLILNRPTLSRRFMP--EKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHA 777
Query: 821 PDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYEL 880
DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY L
Sbjct: 778 SDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTL 837
Query: 881 LKPFSEPGVTGKGVPYSISI 900
L P S+ G+T +G+P SISI
Sbjct: 838 LLPSSKEGLTFRGIPNSISI 857
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/775 (46%), Positives = 480/775 (61%), Gaps = 19/775 (2%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIE 666
NA+GI E++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IE
Sbjct: 548 NANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIE 606
Query: 667 DYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWW 726
DYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWW
Sbjct: 607 DYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWW 666
Query: 727 PVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWK 786
P L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R + + +++
Sbjct: 667 PKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLP--EKGTPEYE 724
Query: 787 FFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEK 846
+ E A L T S++ ++++++LSTH+ DE YLG+ P W D AF+K
Sbjct: 725 EMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQK 784
Query: 847 FRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900
F KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P SISI
Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 637
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 638 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 697
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 698 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 757
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 758 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 817
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 818 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 877
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 878 YELLKP 883
Y L P
Sbjct: 677 YYYLSP 682
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 637
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 638 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 697
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 698 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 757
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 758 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 817
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 818 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 877
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 878 YELLKP 883
Y L P
Sbjct: 677 YYYLAP 682
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 225/486 (46%), Gaps = 47/486 (9%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFD 637
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G K +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYA 464
Query: 638 HEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 697
P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY
Sbjct: 465 SLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQ 515
Query: 698 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQ 757
+VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQ
Sbjct: 516 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQ 575
Query: 758 YTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLS 817
Y + + PN P T R P + +E+ +++T P + ++ + + LS
Sbjct: 576 YDWASWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALS 626
Query: 818 THSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVP 877
+E +LG E + E PV A +FR L + +I RN + +L P
Sbjct: 627 QFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNENLQL---------P 676
Query: 878 YELLKP 883
Y L P
Sbjct: 677 YYYLDP 682
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 586 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 629
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 630 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 689
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 690 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 743
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 744 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 803
Query: 605 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 663
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 804 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 857
Query: 664 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 719
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 858 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 913
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 778
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 914 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 966
Query: 779 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 838
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 967 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 1022
Query: 839 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 891
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 1023 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 663
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 664 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 719
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 778
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 779 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 838
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 839 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 891
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 242/533 (45%), Gaps = 75/533 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 219 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 262
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 263 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 322
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 323 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 376
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HP+++LL PH + I+ + R+
Sbjct: 377 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKE 436
Query: 605 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 663
L+ + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 437 LIGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 490
Query: 664 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 719
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 491 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 546
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 778
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 547 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR-----H 599
Query: 779 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 838
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 600 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 655
Query: 839 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 891
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 656 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 698
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 241/533 (45%), Gaps = 75/533 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 663
L + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LAGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 664 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 719
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 778
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 779 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 838
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 839 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 891
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 241/533 (45%), Gaps = 75/533 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFS-PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKL 663
L + GI++ S S G + F + K+ LP L RG V+DPS G
Sbjct: 434 LWGSGGIVDQSLSLGGGGHVTFMEKCF-KEVNLQDYHLPNALKKRG--VDDPSKLPG--- 487
Query: 664 TIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGD 719
+ + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G
Sbjct: 488 ----FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGH 543
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATE 778
+ H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R
Sbjct: 544 QDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILR-----H 596
Query: 779 DPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDP 838
P ++ + L+ ++L+T PS+ QA K +A + +L+ S DE YLG AW +
Sbjct: 597 PPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKD 652
Query: 839 VINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTG 891
++ A +F+ KL ++ K++ RN VPY L P P T
Sbjct: 653 ALD-AINRFQDKLEDIS---------KKIKQRNENLEVPYIYLLPERIPNGTA 695
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 222/498 (44%), Gaps = 61/498 (12%)
Query: 397 FWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 456
+W D F Q L G NP IR + P + E++EK + ++
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 457 EEAIKQKKLFILDYHDL-FLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPP 515
E+A+K+ +FI DY L +P ++ + T +F+L + PIAI+L + P
Sbjct: 298 EKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 516 MNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNR 575
W + TE W W +AK + D YHQ+++H LR H EP +++ R
Sbjct: 356 GENNSIWTPL-----KDTE-WDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWR 409
Query: 576 QLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWR 635
L +HP+++LL PH + M IN L R L+ G + S G + +
Sbjct: 410 NLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVT 469
Query: 636 FDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPD 695
FD L KDL RG+ GL+ + + +D L LW+ I Q+V D + YY D
Sbjct: 470 FDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQIYYND 517
Query: 696 KSLVESDEELQAWWTEIRTVGH-----GDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHH 750
V+ D E+Q W ++ G+ G K P + ++L+ +T +V+ S H
Sbjct: 518 DDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVP--KSFENREELVHFLTVVVFTCSCQH 575
Query: 751 AAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVM 810
AAVNF Q G+ PN PT R + P E+ K ++ + ++ QA ++
Sbjct: 576 AAVNFSQMATYGFHPNSPTLMR-----QPPPTEKGK----SNHKVIMASLANKHQAVTMV 626
Query: 811 AILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNR 870
++++ L+T P E++LG + + D +AA KF+ L + I RN
Sbjct: 627 SVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERN-------- 677
Query: 871 NGAGMV-PYELLKPFSEP 887
GMV PY L P P
Sbjct: 678 --QGMVSPYTWLIPGHVP 693
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 224/526 (42%), Gaps = 75/526 (14%)
Query: 364 WNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEW 423
WN+L D+ + I + +R + W D F Q L G NP +R E
Sbjct: 108 WNSL---------DSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVEL 158
Query: 424 PLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQ 483
P + + PP +EKE+ G LF D+ L ++
Sbjct: 159 PAR------LKFPPGMEELQAQLEKELQG----------GTLFEADFS--LLDGIKANVI 200
Query: 484 LKSTTLYGSRTIFF-LTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAK 542
L S + L P G L P+ I+L + P G P +FLP+ +W LAK
Sbjct: 201 LSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLPREGSP-LPPLFLPT---DPPMVWLLAK 255
Query: 543 AHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLAR 602
V + D H+L SH LR H E +AT R L +HPI++LL PHFRYTMEIN AR
Sbjct: 256 CWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRAR 315
Query: 603 QALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLK 662
LV+ GI + S G + P DL RGL
Sbjct: 316 NGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDLADRGL------------ 363
Query: 663 LTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW---WTEIRTVGHGD 719
L +E +A D L LW+ I ++V V+ +Y V+ D ELQAW +TEI +G D
Sbjct: 364 LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQD 423
Query: 720 KKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARC-NIAT 777
+ +PV L++ + L +T ++ +G H++ + GQ + + PN P T R T
Sbjct: 424 RG----FPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTT 479
Query: 778 EDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWRED 837
+D + E ++ T P+ QA+ M+I L P LG+ E +
Sbjct: 480 KDATLE-----------TVMATLPNFHQASLQMSITWQLGRCQPTMVALGQH-EEEYFSG 527
Query: 838 PVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKP 883
P A KFR +L L+ I+ RNA L PYE L+P
Sbjct: 528 PGPKAVLTKFREELAALDKDIEVRNAKLAL---------PYEYLRP 564
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 207/490 (42%), Gaps = 62/490 (12%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGI---IESSFSPGKYSMEFSSVAYDKQW 634
+HP+++L+ PH RYT+EIN AR LV+ GI I S+ G + + A+
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 635 RFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYP 694
F P DL RGL L +E +A D L LW+ I ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 695 DKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVN 754
V D ELQ+W EI +G + + + L++ +T ++ +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 755 FGQYTYGGYFPNRPTTARC-NIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAIL 813
GQ + + PN P T R T+D + E ++ T P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLKQSSLQMSIV 593
Query: 814 DVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGA 873
L P LG+ E + P A EKFR +L ++ I+ RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD------- 645
Query: 874 GMVPYELLKP 883
+PYE L+P
Sbjct: 646 --IPYEYLRP 653
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 207/504 (41%), Gaps = 53/504 (10%)
Query: 380 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPES 439
D I + ++ + W DE FS Q L G NP +R T P + L P
Sbjct: 50 DQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGM 103
Query: 440 AITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLT 499
+EKE+ + LF D+ L +R K L + +
Sbjct: 104 EELRAQLEKEL----------QNGSLFEADFILLDGIPANVIRGEKQY-LAAPLVMLKME 152
Query: 500 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHW 559
P G L+P+ I++ P + +FLPS W LAK+ V D H++ H
Sbjct: 153 PNGKLQPMVIQIQPPNPSSPT--PTLFLPSDPPLA---WLLAKSWVRNSDFQLHEIQYHL 207
Query: 560 LRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
L TH E +AT R L +HPI++ L PH RYTMEIN AR L++ GI + + S G
Sbjct: 208 LNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG 267
Query: 620 KYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWD 679
Q + P DL RGL L + +A+D L LW+
Sbjct: 268 GGGHVQLLRRAAAQLTYCSLCPPDDLADRGL------------LGLPGALYAHDALRLWE 315
Query: 680 AIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEII 739
I ++V V+ +Y +V+ D ELQAW EI VG + + ++ L +
Sbjct: 316 IIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFL 375
Query: 740 TTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNT 799
T V+ + HAA+N GQ + + PN P T R P+ ++ + ++ +
Sbjct: 376 TMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMR----MPPPTTKE-----DVTMATVMGS 426
Query: 800 FPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIID 859
P QA MAI LS PD LG E + P A +FR L +LE I
Sbjct: 427 LPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEIT 485
Query: 860 ARNADPKLRNRNGAGMVPYELLKP 883
ARN PYE LKP
Sbjct: 486 ARNEQLDW---------PYEYLKP 500
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 207/490 (42%), Gaps = 62/490 (12%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGI---IESSFSPGKYSMEFSSVAYDKQW 634
+HP+++L+ PH RYT+EIN AR LV+ GI I S+ G + + A+
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYR 439
Query: 635 RFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYP 694
F P DL RGL L +E +A D L LW+ I ++V + YY
Sbjct: 440 SF---CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYK 484
Query: 695 DKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVN 754
V D ELQ+W EI +G + + + L++ +T ++ +G H++++
Sbjct: 485 TDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIH 544
Query: 755 FGQYTYGGYFPNRPTTARC-NIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAIL 813
GQ + + PN P T R T+D + E ++ T P+ Q++ M+I+
Sbjct: 545 LGQLDWFTWVPNAPCTMRLPPPTTKDATLE-----------TVMATLPNLHQSSLQMSIV 593
Query: 814 DVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGA 873
L P LG+ E + P A EKFR +L ++ I+ RN
Sbjct: 594 WQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLD------- 645
Query: 874 GMVPYELLKP 883
+PYE L+P
Sbjct: 646 --IPYEYLRP 653
>pdb|3DS0|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a) In Complex
With An Inhibitor Of Particle Assembly (Cai)
pdb|3DS5|A Chain A, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|B Chain B, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|C Chain C, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
pdb|3DS5|D Chain D, Hiv-1 Capsid C-Terminal Domain Mutant (N183a)
Length = 86
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 675 LDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKD 734
LD+ K+ DYV+ +Y ++ +E++AW TE V + + + L
Sbjct: 6 LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKAWMTETLLVQNANPDCKTILKALGPGAT 65
Query: 735 LIEIITTIVWVTS-GHHAAV 753
L E++T V GH A V
Sbjct: 66 LEEMMTACQGVGGPGHKARV 85
>pdb|3C5I|A Chain A, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|B Chain B, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|C Chain C, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|D Chain D, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
Length = 369
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 167 MYLKDIVLDGLPNGPVNVTCNSWLHSKHDN---KQKRVFFTNKLY---LPSQTPDGLKRY 220
+Y+K I L+ +P W H DN KQ TN+L+ L +T +
Sbjct: 15 LYIKKICLEKVP---------EWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSI 65
Query: 221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK 268
R + R G+ + Y+ I +++VY + P+L GG+
Sbjct: 66 RTR--VLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGR 111
>pdb|3EA6|A Chain A, Atomic Resolution Of Crystal Structure Of Sek
Length = 219
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
>pdb|2NTS|A Chain A, Crystal Structure Of Sek-Hvb5.1
pdb|2NTT|A Chain A, Crystal Structure Of Sek
pdb|2NTT|B Chain B, Crystal Structure Of Sek
Length = 217
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
>pdb|2G9H|D Chain D, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In
Complex With A Human Mhc Class Ii Molecule
Length = 218
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 179 NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNGQGERK 237
N + N W++ KH TNK + +Q D L+RY EE I N G+ K
Sbjct: 90 NSARKIPINLWVNGKHKTISTDKISTNKKLVTAQEIDVKLRRYLQEEYNIYGHNSTGKGK 149
Query: 238 TY 239
Y
Sbjct: 150 EY 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,866,507
Number of Sequences: 62578
Number of extensions: 1376010
Number of successful extensions: 3037
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2835
Number of HSP's gapped (non-prelim): 41
length of query: 900
length of database: 14,973,337
effective HSP length: 108
effective length of query: 792
effective length of database: 8,214,913
effective search space: 6506211096
effective search space used: 6506211096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)