Query 002617
Match_columns 900
No_of_seqs 300 out of 685
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 03:39:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002617.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002617hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 4E-271 8E-276 2337.6 73.7 829 66-900 80-918 (918)
2 PLN02264 lipoxygenase 100.0 2E-268 4E-273 2315.4 69.8 828 66-900 83-919 (919)
3 PLN02337 lipoxygenase 100.0 4E-264 8E-269 2287.6 71.1 827 68-900 19-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 1E-205 2E-210 1792.1 31.4 662 214-884 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 5.8E-40 1.3E-44 319.0 14.3 132 68-205 1-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.2 1.6E-10 3.4E-15 107.5 10.0 83 103-193 20-105 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.7 3.7E-08 8E-13 91.9 8.0 65 139-203 45-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 7.3E-07 1.6E-11 84.3 11.0 63 140-202 49-115 (116)
9 cd02899 PLAT_SR Scavenger rece 98.0 2.4E-05 5.1E-10 74.6 9.0 77 103-192 20-98 (109)
10 cd01756 PLAT_repeat PLAT/LH2 d 97.5 0.0012 2.6E-08 63.5 11.8 93 103-203 20-118 (120)
11 cd01753 PLAT_LOX PLAT domain o 97.5 0.00066 1.4E-08 65.0 9.9 83 103-194 20-106 (113)
12 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.3 0.00091 2E-08 64.4 7.7 54 141-195 43-100 (114)
13 cd01752 PLAT_polycystin PLAT/L 97.1 0.0034 7.3E-08 60.5 10.3 86 103-195 20-109 (120)
14 cd01754 PLAT_plant_stress PLAT 96.5 0.0058 1.3E-07 60.1 6.9 55 139-195 58-119 (129)
15 PF07157 DNA_circ_N: DNA circu 34.6 12 0.00026 35.2 -0.2 72 648-729 11-89 (93)
16 KOG2675 Adenylate cyclase-asso 28.5 1.5E+02 0.0032 35.3 6.9 114 567-727 91-221 (480)
17 cd01755 PLAT_lipase PLAT/ LH2 23.2 3.2E+02 0.007 26.5 7.4 50 139-188 46-105 (120)
18 PF10474 DUF2451: Protein of u 23.2 50 0.0011 35.9 2.0 24 682-711 178-201 (234)
19 PF10281 Ish1: Putative stress 23.1 1.2E+02 0.0027 23.5 3.6 31 701-740 5-35 (38)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=3.8e-271 Score=2337.64 Aligned_cols=829 Identities=52% Similarity=0.956 Sum_probs=795.4
Q ss_pred eeeEEEEEEEEeecccCccccccccccccchhhccCCcEEEEEEecccCCCCCCcc---eeccccccccCCCCCCceEEE
Q 002617 66 KSIKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK---STIQDYARKIGADGDGNMQYE 142 (900)
Q Consensus 66 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~y~ 142 (900)
...+|||+||||+|++++++++. ++.+|+++|++||+|+|||||++++|+||+|| ++|++|+++ ....++++.|+
T Consensus 80 ~~~~i~~~v~~~~~~~~~~~~~~-~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~-~~~~~~~~~~~ 157 (918)
T PLN02305 80 GGIDVRAVITIRKKIKEKITEKF-EDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPK-PSNDPHIVEYA 157 (918)
T ss_pred cCCeEEEEEEEEeecccchhhcc-cchhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccC-CCCCCCceEEE
Confidence 35699999999999999999975 79999999999999999999999999999655 899999987 33325567999
Q ss_pred EEEeecCCCCceeEEEEEecCCCceeeeeEEEeccCCCcEEEeeccccccCCCCCcceEEeecccccCCCCChhhHHHHH
Q 002617 143 SEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRA 222 (900)
Q Consensus 143 ~~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~ylp~~tp~~l~~~R~ 222 (900)
++|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+||||||++++|+++||||+||+|||++||++|++|||
T Consensus 158 ~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re 237 (918)
T PLN02305 158 ADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRR 237 (918)
T ss_pred EEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccCeeeecccccCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCcccccC---CCccC
Q 002617 223 EELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFYVP 299 (900)
Q Consensus 223 ~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~~~~~rpvlgg~~~pyPrR~rtgr~~~~~dp~~e~~~~---~~yvP 299 (900)
+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+|+++||.+|||.. .+|||
T Consensus 238 ~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvP 317 (918)
T PLN02305 238 EDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVP 317 (918)
T ss_pred HHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCC
Confidence 999999999999999999999999999999999999999999999669999999999999999999999953 47999
Q ss_pred CCCccChhhhcchhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCcccccchhch-hH-HHHHHhhc
Q 002617 300 RDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LP-RLVKAIED 377 (900)
Q Consensus 300 rDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~g~~~~~~~~~~~~~~~-~~-~~~~~~~~ 377 (900)
|||+|+++|++||+++++|+++|.++|.|+++++.+..+|+||+||++||++|++||.... +..+.+ +| .+.+.+++
T Consensus 318 rDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~~-~~~~~~p~~~~~~~~i~~ 396 (918)
T PLN02305 318 RDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEP-KDIGLNPFLGNFMKQVLS 396 (918)
T ss_pred CCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchhh-hhhhcCCchHHHHHHhhh
Confidence 9999999999999999999999999999999998889999999999999999999998421 222223 43 55555688
Q ss_pred cCCccccccCccccccccccccccHHHHHHHhhCCCccchhccccCCCCCCCCCCcCCCCCCcccHHHHHHhhCCcccHH
Q 002617 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457 (900)
Q Consensus 378 ~~~~~l~~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~g~~tl~ 457 (900)
+++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||+|||+..|+| +||+
T Consensus 397 ~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~Tle 475 (918)
T PLN02305 397 VSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-MTVE 475 (918)
T ss_pred cccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-CcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEeeCCCCCCCCCCceeeeCCCCCCCchH
Q 002617 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWL 537 (900)
Q Consensus 458 eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~ 537 (900)
|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||+++++++|.
T Consensus 476 eAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~ 555 (918)
T PLN02305 476 KAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555 (918)
T ss_pred HHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999988777778899999877778999
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhhcccchhHHHHHhhccCCccCchhhcccccccccccchHHHHhcccCCCcccccccC
Q 002617 538 WKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFS 617 (900)
Q Consensus 538 W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~~~ 617 (900)
|+||||||++||++|||+|+||++|||||||||||||||||++|||||||+||||+||+||++||++|||+||+||++|+
T Consensus 556 W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fs 635 (918)
T PLN02305 556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFS 635 (918)
T ss_pred HHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhccccccccc
Q 002617 618 PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 697 (900)
Q Consensus 618 ~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~ 697 (900)
+|+|+|+|++++|++.|+|++++||+||++|||+++|+++|||++|.|||||||+|||+||+||++||++||++||++|+
T Consensus 636 pg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~ 715 (918)
T PLN02305 636 PGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPN 715 (918)
T ss_pred cchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChh
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhheeeccccccccccccccccccccCCccccccCCCCC
Q 002617 698 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIAT 777 (900)
Q Consensus 698 ~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~ 777 (900)
+|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||||||+|||||||||||||+|+||+||+|++||++||+
T Consensus 716 ~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~ 795 (918)
T PLN02305 716 SITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795 (918)
T ss_pred hhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHhhcCCCCCCccccCcCCC--CCCCcHHHHHHHHHHHHHHHHHH
Q 002617 778 EDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEP--AWREDPVINAAFEKFRGKLMELE 855 (900)
Q Consensus 778 ~~kg~~e~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~~Ie 855 (900)
+ +++++++|+.+||++||++||++.||+.+|+++++||+|++||+|||++.++ .|+.|+++++||++|+++|++||
T Consensus 796 ~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE 873 (918)
T PLN02305 796 E--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIE 873 (918)
T ss_pred C--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHH
Confidence 7 6788999999999999999999999999999999999999999999999886 79999999999999999999999
Q ss_pred HHHhhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 002617 856 GIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900 (900)
Q Consensus 856 ~~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 900 (900)
++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 874 ~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 874 KTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 999999999999999999999999999999999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=1.7e-268 Score=2315.36 Aligned_cols=828 Identities=51% Similarity=0.942 Sum_probs=793.7
Q ss_pred eeeEEEEEEEEeecccCccccccccccccchhhccCCcEEEEEEecccCCCCCCcc----eeccccccccCCCCCCceEE
Q 002617 66 KSIKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQY 141 (900)
Q Consensus 66 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~y 141 (900)
.+++|||+||||++++++++++. ++.+|+++|++||+|+|||||+++||+||+|+ ++|++|+++ ....++++.|
T Consensus 83 ~~~~i~~~v~~~~~~~~~~~~~~-~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~~y 160 (919)
T PLN02264 83 VKFKVRAVVTVRNKNKEDLKETL-VKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAERVHY 160 (919)
T ss_pred eEEEEEEEEEEEeccccchhhcc-cchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccC-CCCCCCceEE
Confidence 46799999999999999999875 79999999999999999999999999998433 899999987 4435666799
Q ss_pred EEEEeecCCCCceeEEEEEecCCCceeeeeEEEeccCCCcEEEeeccccccCCCCCcceEEeecccccCCCCChhhHHHH
Q 002617 142 ESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYR 221 (900)
Q Consensus 142 ~~~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~g~~~F~c~sWv~~~~~~~~~riff~n~~ylp~~tp~~l~~~R 221 (900)
+++|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||++||++|++||
T Consensus 161 ~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~R 240 (919)
T PLN02264 161 TAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALR 240 (919)
T ss_pred EEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCccccccCeeeecccccCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCcccccC---CCcc
Q 002617 222 AEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFYV 298 (900)
Q Consensus 222 ~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~~~~~rpvlgg~~~pyPrR~rtgr~~~~~dp~~e~~~~---~~yv 298 (900)
|+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+|+++||.+|||.. .+||
T Consensus 241 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYv 320 (919)
T PLN02264 241 EKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYV 320 (919)
T ss_pred HHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeC
Confidence 9999999999999999999999999999999999999999999999779999999999999999999999954 4799
Q ss_pred CCCCccChhhhcchhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCcccccchhch-hHHHHHHhhc
Q 002617 299 PRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRLVKAIED 377 (900)
Q Consensus 299 PrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 377 (900)
||||+|+++|++||+++++|+++|.++|.|+++++.+ +|+||+||++||++|++||.....+..+.+ +|.+.+.+++
T Consensus 321 PrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~~p~~~~~~~~~~ 398 (919)
T PLN02264 321 PRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQE 398 (919)
T ss_pred CCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhHhhcCChHHHHHHhhh
Confidence 9999999999999999999999999999999998754 999999999999999999974222233333 5466666688
Q ss_pred cCCccccccCccccccccccccccHHHHHHHhhCCCccchhccccCCCCCCCCCCcCCCCCCcccHHHHHHhhCCcccHH
Q 002617 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457 (900)
Q Consensus 378 ~~~~~l~~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~g~~tl~ 457 (900)
+++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+++|+||++||+..|+| +||+
T Consensus 399 ~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G-~Tl~ 477 (919)
T PLN02264 399 SSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDG-LSVQ 477 (919)
T ss_pred cccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCC-CcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEeeCCCCCCCCCCceeeeCCCCCCCchH
Q 002617 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWL 537 (900)
Q Consensus 458 eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~ 537 (900)
|||++|||||+||||++|||++++|.++++++|||+||||++++|+|+||||||+++++.+++++++||||+++++++|.
T Consensus 478 eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~~~~w~ 557 (919)
T PLN02264 478 QALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWM 557 (919)
T ss_pred HHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999987766678899999777778999
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhhcccchhHHHHHhhccCCccCchhhcccccccccccchHHHHhcccCCCcccccccC
Q 002617 538 WKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFS 617 (900)
Q Consensus 538 W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~~~ 617 (900)
|+||||||++||++|||+|+||++||++||||||||+||||.+|||||||.||||+||+||++||++|||+||++|++|+
T Consensus 558 W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f~ 637 (919)
T PLN02264 558 WQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCFT 637 (919)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhccccccccc
Q 002617 618 PGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKS 697 (900)
Q Consensus 618 ~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~ 697 (900)
+|+|+|||++++|++.|+|++++||+||++|||+++|+++||||++.|||||||+|||+||+||++||++||++||++|+
T Consensus 638 pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY~~D~ 717 (919)
T PLN02264 638 AGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPS 717 (919)
T ss_pred cchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHhCCChh
Confidence 99999999999999779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhheeeccccccccccccccccccccCCccccccCCCCC
Q 002617 698 LVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIAT 777 (900)
Q Consensus 698 ~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~ 777 (900)
+|++|.|||+||+||++.||+|+++.+|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+
T Consensus 718 ~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~rrp~P~ 797 (919)
T PLN02264 718 LICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPD 797 (919)
T ss_pred hhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHhhcCCCCCCccccCcCCC-CCCCcHHHHHHHHHHHHHHHHHHH
Q 002617 778 EDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEP-AWREDPVINAAFEKFRGKLMELEG 856 (900)
Q Consensus 778 ~~kg~~e~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~~Ie~ 856 (900)
+ ++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+|||++..+ .|+.|+++++||++|+++|++||+
T Consensus 798 ~--~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~eIe~ 875 (919)
T PLN02264 798 E--SDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGRIEK 875 (919)
T ss_pred C--CChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 7 6689999999999999999999999999999999999999999999998765 799999999999999999999999
Q ss_pred HHhhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 002617 857 IIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 900 (900)
Q Consensus 857 ~I~~RN~~~~lknr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI 900 (900)
+|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 876 ~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 876 EIEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCCCcccC
Confidence 99999999999999999999999999999999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=3.8e-264 Score=2287.64 Aligned_cols=827 Identities=46% Similarity=0.825 Sum_probs=791.7
Q ss_pred eEEEEEEEEeecccCccccccccccccchhhccCCcEEEEEEecccCC-CCC-Ccc----eeccccccccCCCCCCceEE
Q 002617 68 IKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDP-KTG-LDK----STIQDYARKIGADGDGNMQY 141 (900)
Q Consensus 68 ~~~~~~v~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~-~~g-~~~----~~~~~~~~~~~~~~~~~~~y 141 (900)
.+|||+||||+|++++++++. ++.+|+++|++||+|+|||||++++| +|| +|| ++|++|+++.....+++++|
T Consensus 19 ~~~~~~v~l~~k~~ld~~~~~-~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~~y 97 (866)
T PLN02337 19 EKIKGTVVLMKKNVLDFNDFN-ASVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESAF 97 (866)
T ss_pred ceEEEEEEEEEecccchhhcc-cchhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCceEE
Confidence 389999999999999999976 89999999999999999999999998 777 443 89999998765545666899
Q ss_pred EEEEeecCCCCceeEEEEEecCCCceeeeeEEEeccCC-CcEEEeeccccccCCCCCcceEEeecccccCCCCChhhHHH
Q 002617 142 ESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRY 220 (900)
Q Consensus 142 ~~~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n~~ylp~~tp~~l~~~ 220 (900)
+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+||+|||++||++|++|
T Consensus 98 ~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~ 177 (866)
T PLN02337 98 KVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPY 177 (866)
T ss_pred EEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHHH
Confidence 99999999999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccCeeeecccccCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCCCcccccC----C
Q 002617 221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREG----N 295 (900)
Q Consensus 221 R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~~~~~rpvlgg-~~~pyPrR~rtgr~~~~~dp~~e~~~~----~ 295 (900)
||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||.+|||.. .
T Consensus 178 R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~~ 257 (866)
T PLN02337 178 REEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSLN 257 (866)
T ss_pred HHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999 679999999999999999999999943 4
Q ss_pred CccCCCCccChhhhcchhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCcccccchhch--hHHHHH
Q 002617 296 FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLVK 373 (900)
Q Consensus 296 ~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~g~~~~~~~~~~~~~~~--~~~~~~ 373 (900)
+||||||+|+++|++||+++++|+++|.++|.|+++++.+..+|++|+||++||++|++||..+..+.++.. ++.+++
T Consensus 258 ~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~~~~~~~~~p~~~~~~ 337 (866)
T PLN02337 258 IYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLKE 337 (866)
T ss_pred cccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchHHHHhhhcChHHHHHH
Confidence 799999999999999999999999999999999999988889999999999999999999986443334443 345777
Q ss_pred HhhccCCccccccCccccccccccccccHHHHHHHhhCCCccchhccccCCCCCCCCCCcCCCCCCcccHHHHHHhhCCc
Q 002617 374 AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGM 453 (900)
Q Consensus 374 ~~~~~~~~~l~~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~g~ 453 (900)
.++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++||+..|+|
T Consensus 338 ~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g- 416 (866)
T PLN02337 338 LLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEG- 416 (866)
T ss_pred HHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCC-
Confidence 7788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEeeCCCCCCC--CCCceeeeCCCC
Q 002617 454 ISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGK--PQWKQVFLPSWH 531 (900)
Q Consensus 454 ~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~--~~~~~VftP~d~ 531 (900)
+||+|||++|||||+||||.+|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ +++++||||+++
T Consensus 417 ~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~ 495 (866)
T PLN02337 417 LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAED 495 (866)
T ss_pred ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCCC
Confidence 9999999999999999999999999999986554 9999999999999999999999998875433 457999999987
Q ss_pred CCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhHHHHHhhccCCccCchhhcccccccccccchHHHHhcccCCCcc
Q 002617 532 STECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGI 611 (900)
Q Consensus 532 ~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGi 611 (900)
++++|.|+||||||++||+++||+|+||++||+++|||||||+||||++|||||||+||||+||+||++||++|||+||+
T Consensus 496 ~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGi 575 (866)
T PLN02337 496 GVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGI 575 (866)
T ss_pred CCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHheeCCCCe
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCchhHHHHHHHHHhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhccc
Q 002617 612 IESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNH 691 (900)
Q Consensus 612 ie~~~~~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~ 691 (900)
+|+++++|+|+|+|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||++
T Consensus 576 id~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~V~~yv~~ 654 (866)
T PLN02337 576 LESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWVKEYCAF 654 (866)
T ss_pred eeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhheeeccccccccccccccccccccCCccccc
Q 002617 692 YYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTA 771 (900)
Q Consensus 692 YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~ 771 (900)
||++|++|++|.|||+||+||+++||+++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++|
T Consensus 655 YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~ 734 (866)
T PLN02337 655 YYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNRPTVS 734 (866)
T ss_pred hCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHhhcCCCCCCccccCcCCCCCCCcHHHHHHHHHHHHHH
Q 002617 772 RCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKL 851 (900)
Q Consensus 772 r~p~P~~~kg~~e~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L 851 (900)
|++||++ |+.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|+.|+++++|+++|+++|
T Consensus 735 r~~~P~~--~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~a~~~F~~~L 812 (866)
T PLN02337 735 RRFMPEP--GTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFKRFGERL 812 (866)
T ss_pred cCCCCCC--CchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHHHHHHHHHHH
Confidence 9999976 88899999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHhhhcCCccccccCCCccCCceeecCCC-----CCCCCcCCCCccccC
Q 002617 852 MELEGIIDARNADPKLRNRNGAGMVPYELLKPFS-----EPGVTGKGVPYSISI 900 (900)
Q Consensus 852 ~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Pss-----~~g~t~~gIPnSIsI 900 (900)
++||++|++||+++.+|||+||+++||+||+|++ +||||||||||||||
T Consensus 813 ~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 813 VEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9999999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=1.1e-205 Score=1792.14 Aligned_cols=662 Identities=58% Similarity=1.002 Sum_probs=577.8
Q ss_pred ChhhHHHHHHHHHHHhcCCCccccccCeeeecccccCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCCCcccc
Q 002617 214 PDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKR 292 (900)
Q Consensus 214 p~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~pd~~~~~~rpvlgg-~~~pyPrR~rtgr~~~~~dp~~e~~ 292 (900)
|++|+++||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 789999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred cCCCccCCCCccChhhhcchhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCcccccchhch--hHH
Q 002617 293 EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPR 370 (900)
Q Consensus 293 ~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~g~~~~~~~~~~~~~~~--~~~ 370 (900)
...+||||||+|+++|+++|.++++|+++|.++|.|++++..+..+|+||+||++||++|++||... .+.. ++.
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~~~----~~~~~~~~~ 156 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPTDL----LKKLIPLEL 156 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--HHH----HCCHTTSTT
T ss_pred cccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchhhH----hhhcCcHHH
Confidence 8899999999999999999999999999999999999998778899999999999999999998321 2222 334
Q ss_pred HHHHhhccCCccccccCccccccccccccccHHHHHHHhhCCCccchhccccCCCCCCCCCCcCCCCCCcccHHHHHHhh
Q 002617 371 LVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEI 450 (900)
Q Consensus 371 ~~~~~~~~~~~~l~~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l 450 (900)
+.+.+.+++++++|||+|+|++.++++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++||+..|
T Consensus 157 ~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~~~l 236 (667)
T PF00305_consen 157 LKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIEPQL 236 (667)
T ss_dssp CCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHHHHC
T ss_pred HHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhhhcc
Confidence 66777788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEeeCCCCCCCCCCceeeeCCC
Q 002617 451 GGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSW 530 (900)
Q Consensus 451 ~g~~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d 530 (900)
+| +||++||++|||||+|||++++|++++||. ++++.|||+||||++++|+|+||||||++|+..+.++.++||||++
T Consensus 237 ~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP~~ 314 (667)
T PF00305_consen 237 EG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTPSD 314 (667)
T ss_dssp HC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-TTS
T ss_pred CC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeecCC
Confidence 99 999999999999999999999999999998 7899999999999999999999999998886555456789999996
Q ss_pred CCCCchHHHHHHHHHHhhhhhhhHHHHhhhhcccchhHHHHHhhccCCccCchhhcccccccccccchHHHHhcccCCCc
Q 002617 531 HSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG 610 (900)
Q Consensus 531 ~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gG 610 (900)
+++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||++||
T Consensus 315 d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG 394 (667)
T PF00305_consen 315 DGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLINAGG 394 (667)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSSTTS
T ss_pred CCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhccCc
Confidence 65678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCchhHHHHHHHHHhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhcc
Q 002617 611 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVN 690 (900)
Q Consensus 611 iie~~~~~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~ 690 (900)
+||++|++|+++|+|++++|++ |+|++++||+||++|||+++|++++||+++.|||||||+|||+||+||++||++||+
T Consensus 395 ~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~~v~ 473 (667)
T PF00305_consen 395 IIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSDYVN 473 (667)
T ss_dssp HHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhheeeccccccccccccccccccccCCcccc
Q 002617 691 HYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTT 770 (900)
Q Consensus 691 ~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~ 770 (900)
+||++|++|++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|++
T Consensus 474 ~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~P~~ 553 (667)
T PF00305_consen 474 LYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNRPTA 553 (667)
T ss_dssp HHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS-S-
T ss_pred hhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCCChh
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCchH--HHHhhcccHHHHHccCCChHHHHHHHHHHHhhcCCCCCCccccCcCCCCCCCcHHHHHHHHHHH
Q 002617 771 ARCNIATEDPSDEQ--WKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFR 848 (900)
Q Consensus 771 ~r~p~P~~~kg~~e--~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~ 848 (900)
||+++|.+ +..+ |++|+++||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|+++|+
T Consensus 554 ~r~~~P~~--~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~F~ 631 (667)
T PF00305_consen 554 LRRPMPPP--TTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFERFQ 631 (667)
T ss_dssp BSSSS--T--SSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHHHH
T ss_pred hcccCCCC--CcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHHHH
Confidence 99999987 5555 9999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHHHHHhhhcCCccccccCCCccCCceeecCC
Q 002617 849 GKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPF 884 (900)
Q Consensus 849 ~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps 884 (900)
++|++||++|++||+++.+|||+|||++||+||+||
T Consensus 632 ~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 632 EELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 999999999999999999999999999999999996
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=5.8e-40 Score=319.05 Aligned_cols=132 Identities=52% Similarity=0.869 Sum_probs=123.0
Q ss_pred eEEEEEEEEeecccCccccccccccccchhhccCCcEEEEEEecccCCCCCCcc----eeccccccccCCCCCCceEEEE
Q 002617 68 IKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQYES 143 (900)
Q Consensus 68 ~~~~~~v~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~y~~ 143 (900)
++|||+|+||++++++++++. +.+|+++|++||+|+|||||+++||+||+|| ++|++|.++. ++++.|++
T Consensus 1 ~~vka~V~v~~k~~~~~~~~~--~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e~~y~~ 74 (137)
T cd01751 1 VKVKATVTVMKKNKLDLNDDG--SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGESAYEA 74 (137)
T ss_pred CEEEEEEEEEEeecccccccc--chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC----CcceEEEE
Confidence 379999999999999998875 8899999999999999999999999999655 8999998654 44579999
Q ss_pred EEeecCCCCceeEEEEEecCCCceeeeeEEEeccCC-CcEEEeeccccccCCCCCcceEEeec
Q 002617 144 EFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTN 205 (900)
Q Consensus 144 ~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~-g~~~F~c~sWv~~~~~~~~~riff~n 205 (900)
+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 75 ~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 75 EFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 999999999999999999999999999999999995 99999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.16 E-value=1.6e-10 Score=107.45 Aligned_cols=83 Identities=39% Similarity=0.626 Sum_probs=64.6
Q ss_pred cEEEEEEecccCCCCCCc-ceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC-CCceeeeeEEEeccCCC
Q 002617 103 SLLLELVSAELDPKTGLD-KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLPNG 180 (900)
Q Consensus 103 ~v~lqLvS~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~~-~~e~fl~~i~l~~~p~g 180 (900)
+|.|+|++++.+ +|.. ...++.|. ...+ ..|++.|+++.++|++++|.|.|.+ +.+|||++|+|++.+.|
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~-----f~~g-~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~ 91 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI-----FARG-STYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTG 91 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc-----ccCC-ceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCC
Confidence 599999998765 3321 13444442 2333 4788888899999999999999999 89999999999876654
Q ss_pred -cEEEeeccccccC
Q 002617 181 -PVNVTCNSWLHSK 193 (900)
Q Consensus 181 -~~~F~c~sWv~~~ 193 (900)
.++|+||+||+++
T Consensus 92 ~~~~F~c~~Wl~~~ 105 (105)
T smart00308 92 GKYHFPCNSWVYPD 105 (105)
T ss_pred CEEEEEcCceeCCC
Confidence 8999999999763
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.71 E-value=3.7e-08 Score=91.94 Aligned_cols=65 Identities=31% Similarity=0.565 Sum_probs=58.0
Q ss_pred eEEEEEEeecCCCCceeEEEEEec---CCCceeeeeEEEeccCCC-cEEEeeccccccCCCCCcceEEe
Q 002617 139 MQYESEFEVPSGFGEIGAILVENE---HHKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHDNKQKRVFF 203 (900)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~---~~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~riff 203 (900)
...++.|+++.++|.+.+|.|.+. +...|||++|+|...+.| .+.|+||+||....+++.+||||
T Consensus 45 ~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 45 STDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred ceEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 456667778889999999999998 788999999999876655 89999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.52 E-value=7.3e-07 Score=84.31 Aligned_cols=63 Identities=13% Similarity=0.243 Sum_probs=55.3
Q ss_pred EEEEEEeecCCCCceeEEEEEecCCC---ceeeeeEEEeccCCC-cEEEeeccccccCCCCCcceEE
Q 002617 140 QYESEFEVPSGFGEIGAILVENEHHK---EMYLKDIVLDGLPNG-PVNVTCNSWLHSKHDNKQKRVF 202 (900)
Q Consensus 140 ~y~~~f~~~~~fG~pgAv~v~n~~~~---e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~~~~~rif 202 (900)
.++..|+++.++|.+.+|.|.+.+.. +|||++|+|.+...| .++|+||+||.....++.+|+|
T Consensus 49 ~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~ 115 (116)
T cd00113 49 TDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSL 115 (116)
T ss_pred ceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeec
Confidence 56667778889999999999998865 999999999876655 8999999999999988888886
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.02 E-value=2.4e-05 Score=74.58 Aligned_cols=77 Identities=14% Similarity=0.314 Sum_probs=53.9
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC-CCceeeeeEEEeccCCC-
Q 002617 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLPNG- 180 (900)
Q Consensus 103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~~-~~e~fl~~i~l~~~p~g- 180 (900)
+|.|+||-++- +++ +..|.+ .-.......|.|+ ++++|.+-.|.|.|.. ...|||+.|+|.+ |.|
T Consensus 20 ~V~i~L~G~~g--~S~--~~~L~~-----~F~~G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g~ 86 (109)
T cd02899 20 TIEITLLGSSG--RSN--PKTLSQ-----GFYPGSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS-EDGK 86 (109)
T ss_pred eEEEEEEECCC--CcC--CEEccC-----ccCCCceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC-CCCC
Confidence 48999996632 222 223332 1111222356554 8999999999998877 5679999999986 866
Q ss_pred cEEEeecccccc
Q 002617 181 PVNVTCNSWLHS 192 (900)
Q Consensus 181 ~~~F~c~sWv~~ 192 (900)
..+||||+|+..
T Consensus 87 ~~~Fpc~rWla~ 98 (109)
T cd02899 87 VFAFNVKRWIGY 98 (109)
T ss_pred EEEEEcceeeCC
Confidence 788999999954
No 10
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.50 E-value=0.0012 Score=63.54 Aligned_cols=93 Identities=15% Similarity=0.357 Sum_probs=59.9
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCC-ceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEeccC
Q 002617 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDG-NMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLP 178 (900)
Q Consensus 103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~y~~~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p 178 (900)
+|.++|+-+.- . .++-.|..+. .......+ ...|.++ . .++|.+-.|.|.... ...|||+.|+|.+..
T Consensus 20 ~V~i~L~G~~g--~--s~~~~L~~~~-~~~~FerGs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~ 91 (120)
T cd01756 20 NVFITLYGENG--D--TGKRKLKKSN-NKNKFERGQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPG 91 (120)
T ss_pred EEEEEEEeCCC--c--cccEEccCCC-cCCcccCCCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECC
Confidence 48888885421 1 2234455431 11122223 2355554 5 899999999998866 368999999998644
Q ss_pred CC-cEEEeeccccccCCCC-CcceEEe
Q 002617 179 NG-PVNVTCNSWLHSKHDN-KQKRVFF 203 (900)
Q Consensus 179 ~g-~~~F~c~sWv~~~~~~-~~~riff 203 (900)
.| ..+|+||+|+...+.. .-.|++.
T Consensus 92 ~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 92 TGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred CceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 45 7889999999887642 2346654
No 11
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.50 E-value=0.00066 Score=64.97 Aligned_cols=83 Identities=19% Similarity=0.368 Sum_probs=56.1
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEeccCC
Q 002617 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN 179 (900)
Q Consensus 103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p~ 179 (900)
+|.|+|+-++-+ ++ .-.|..... . ...+ ...+..+.++.++|.+-.|.|.... ...|||+.|+|++ +.
T Consensus 20 ~V~i~l~G~~g~--S~--~~~L~~~~~--~-FerG-~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~-~~ 90 (113)
T cd01753 20 YIYLTLVGTAGE--SE--KQLLDRPGY--D-FERG-AVDEYKVKVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG-PG 90 (113)
T ss_pred EEEEEEEECCCc--cc--CEEcCCCCC--c-cCCC-CeeEEEEecccCCCCcEEEEEEECCCCCCCCeeecEEEEEc-CC
Confidence 488998865432 22 223332211 1 2223 2344455578899999999998876 5789999999986 44
Q ss_pred C-cEEEeeccccccCC
Q 002617 180 G-PVNVTCNSWLHSKH 194 (900)
Q Consensus 180 g-~~~F~c~sWv~~~~ 194 (900)
| ..+||||+|+....
T Consensus 91 ~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 91 GDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCEEEEEhHHeECCCC
Confidence 6 78899999997765
No 12
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.26 E-value=0.00091 Score=64.36 Aligned_cols=54 Identities=15% Similarity=0.434 Sum_probs=43.8
Q ss_pred EEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEeccCCC-cEEEeeccccccCCC
Q 002617 141 YESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHD 195 (900)
Q Consensus 141 y~~~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p~g-~~~F~c~sWv~~~~~ 195 (900)
|+++++. .++|..-.|.|...+ ...|||+.|.|++.+.| ..+||||+|+.-.+.
T Consensus 43 f~~~v~~-~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 43 LEMTFDC-QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred eEEEEec-CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 4444433 999999999998765 57899999999987766 799999999977664
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.13 E-value=0.0034 Score=60.53 Aligned_cols=86 Identities=20% Similarity=0.352 Sum_probs=57.3
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEeccCC
Q 002617 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN 179 (900)
Q Consensus 103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p~ 179 (900)
+|.|+|+.+.-+ + ++-.|.+... .....+ ..++..+..+.++|.+-.|.|.... ...|||++|+|.+.-.
T Consensus 20 ~V~i~L~G~~g~--s--~~~~L~~~~~--~~F~rG-~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~t 92 (120)
T cd01752 20 KVTITLYGAEGE--S--EPHHLRDPEK--PIFERG-SVDSFLLTTPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQT 92 (120)
T ss_pred EEEEEEEeCCCC--c--ccEEcCCCCc--cceeCC-CeeEEEecCccCCCCccEEEEEECCCCCCCCeEEEEEEEEECCC
Confidence 488888865421 2 2233332211 122333 3555666677899999999996654 5689999999986444
Q ss_pred C-cEEEeeccccccCCC
Q 002617 180 G-PVNVTCNSWLHSKHD 195 (900)
Q Consensus 180 g-~~~F~c~sWv~~~~~ 195 (900)
| ...||||+|+...+.
T Consensus 93 ~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 93 GKKWFFLCNDWLSVEEG 109 (120)
T ss_pred CcEEEEEeCcEECCcCC
Confidence 5 789999999987654
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=96.55 E-value=0.0058 Score=60.11 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=43.8
Q ss_pred eEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEeccCC---C-cEEEeeccccccCCC
Q 002617 139 MQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN---G-PVNVTCNSWLHSKHD 195 (900)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p~---g-~~~F~c~sWv~~~~~ 195 (900)
..|.++ .+.++|.+-.|.|.... ...|||..|+|.+... + ..+||||+|+...+.
T Consensus 58 d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 58 DRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 366665 67889999999998755 6789999999987542 2 689999999977664
No 15
>PF07157 DNA_circ_N: DNA circularisation protein N-terminus; InterPro: IPR009826 This entry represents the N terminus (approximately 100 residues) of a number of phage DNA circulation proteins.
Probab=34.59 E-value=12 Score=35.19 Aligned_cols=72 Identities=24% Similarity=0.566 Sum_probs=45.6
Q ss_pred cCCC--CCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhcc--ccccccccccC---CHHHHHHHHHHhhccCCCC
Q 002617 648 RGLA--VEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVN--HYYPDKSLVES---DEELQAWWTEIRTVGHGDK 720 (900)
Q Consensus 648 RG~a--~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~--~YY~sD~~V~~---D~ELQaW~~Ei~~~G~~d~ 720 (900)
||+. +.+.+...|=++....|||||.+ ||+|.=. --|+=.+-+.. +..++++++-+.+.|-|.+
T Consensus 11 RGVpF~v~~~~~~~gRr~~~heyP~rd~~---------~vEDlG~~~r~~~~~a~~~G~dy~~~~~~L~~al~~~G~G~L 81 (93)
T PF07157_consen 11 RGVPFDVESTDDSGGRRLAVHEYPYRDGP---------WVEDLGRKARRIRVTAFFVGDDYEAQRDALIAALEAPGPGEL 81 (93)
T ss_pred CCeeEEEEEcccCCCcEEEEEecCCCCCc---------CeeecCCCCcEEEEEEEEECCcHHHHHHHHHHHHcCCCCeEE
Confidence 6665 44445566778889999999987 6666411 11221222222 2567788888888888876
Q ss_pred CCCCCCCCC
Q 002617 721 KHEPWWPVL 729 (900)
Q Consensus 721 kd~p~~P~i 729 (900)
-. |||..+
T Consensus 82 vH-P~~G~~ 89 (93)
T PF07157_consen 82 VH-PWFGSM 89 (93)
T ss_pred ec-CCCceE
Confidence 65 777654
No 16
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=28.47 E-value=1.5e+02 Score=35.27 Aligned_cols=114 Identities=26% Similarity=0.318 Sum_probs=77.4
Q ss_pred hHHHHHhhccCCccCchhhcccccccccccchHHH--------------HhcccCCCcccccccCCchhHHHH--HHHHH
Q 002617 567 EPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLA--------------RQALVNADGIIESSFSPGKYSMEF--SSVAY 630 (900)
Q Consensus 567 EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lA--------------R~~LI~~gGiie~~~~~G~~~~el--ss~~Y 630 (900)
+-+.+|..+|=|..-=+..+|.|--..++.||..= -..=|++=|++.-.-+|+.|.-|| ++.-|
T Consensus 91 ~~L~~A~q~qKPds~elad~LkPI~e~i~eI~~fkE~nRkS~~FNhLsav~e~i~algWVav~~tP~p~vke~~daa~FY 170 (480)
T KOG2675|consen 91 AFLWVASQKQKPDSNELADLLKPINEEIGEINNFKEKNRKSPFFNHLSAVSESIPALGWVAVKPTPAPYVKEFKDAAQFY 170 (480)
T ss_pred HHHHHHHhccCCChHHHHHHhhhHHHhhhHHhhhhhcccCchHHHHHHHHHhhcccceeEecCCCCchHHHHHHHHHHHH
Confidence 34677888888888889999999999999988743 233345567776666688886554 33344
Q ss_pred hccCCCCccCCchHHHh-cCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhccccccccccccCCHHHHHHH
Q 002617 631 DKQWRFDHEALPKDLIS-RGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWW 709 (900)
Q Consensus 631 ~~~w~f~~~~lP~DL~~-RG~a~~D~~~~hgl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~ 709 (900)
-+ .-|+. ||- |+ .- -+||+.|+++| .|||+++
T Consensus 171 ~N----------rvLkEyk~~---D~-------------------~h-----veWvKa~l~l~----------~eL~~YV 203 (480)
T KOG2675|consen 171 TN----------RVLKEYKEK---DP-------------------RH-----VEWVKAYLALF----------LELQAYV 203 (480)
T ss_pred HH----------HHHHHhccC---Ch-------------------hH-----HHHHHHHHHHH----------HHHHHHH
Confidence 43 11211 332 11 11 16999999999 6899999
Q ss_pred HHHhhccCCCCCCCCCCC
Q 002617 710 TEIRTVGHGDKKHEPWWP 727 (900)
Q Consensus 710 ~Ei~~~G~~d~kd~p~~P 727 (900)
+|-.+-|....++-+-.|
T Consensus 204 k~hhtTGl~W~~~g~~~~ 221 (480)
T KOG2675|consen 204 KEHHTTGLVWNKDGGAAP 221 (480)
T ss_pred HHhccccceecCCCCccc
Confidence 999998887766643334
No 17
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=23.22 E-value=3.2e+02 Score=26.48 Aligned_cols=50 Identities=10% Similarity=0.128 Sum_probs=39.1
Q ss_pred eEEEEEEeecCCCCceeEEEEEecC----------CCceeeeeEEEeccCCCcEEEeecc
Q 002617 139 MQYESEFEVPSGFGEIGAILVENEH----------HKEMYLKDIVLDGLPNGPVNVTCNS 188 (900)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~~----------~~e~fl~~i~l~~~p~g~~~F~c~s 188 (900)
..|+.-+..+.++|..-.|.+.=+. ...||++.|+|++...+.-...|.+
T Consensus 46 ~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 46 KTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 4788888889999999888874322 3489999999987777766777877
No 18
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=23.18 E-value=50 Score=35.89 Aligned_cols=24 Identities=33% Similarity=0.913 Sum_probs=20.1
Q ss_pred HHHHHHhccccccccccccCCHHHHHHHHH
Q 002617 682 KQWVTDYVNHYYPDKSLVESDEELQAWWTE 711 (900)
Q Consensus 682 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~E 711 (900)
.+||..||..|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 479999999999 334689999986
No 19
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=23.09 E-value=1.2e+02 Score=23.54 Aligned_cols=31 Identities=29% Similarity=0.548 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHh
Q 002617 701 SDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIIT 740 (900)
Q Consensus 701 ~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT 740 (900)
.|.+|+.|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46899999987 332222 12269999998763
Done!