Query         002617
Match_columns 900
No_of_seqs    268 out of 685
Neff          5.3 
Searched_HMMs 29240
Date          Tue Mar 26 15:48:35 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002617.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1337-1341//hhsearch_pdb/002617hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2iuk_A SEED lipoxygenase; iron   1.0       1       1 2153.2  58.3  824   66-900     7-864 (864)
  2 1f8n_A Lipoxygenase-1; dioxyge   1.0       1       1 2120.1  55.7  823   66-900     4-839 (839)
  3 2iuj_A Lipoxygenase L-5; dioxy   1.0       1       1 2116.6  59.6  824   65-900     6-853 (853)
  4 1lox_A 15-lipoxygenase, 15LOX;   1.0       1       1 1408.3  40.3  633  102-900    19-662 (662)
  5 3dy5_A Allene oxide synthase-l   1.0       1       1 1337.4  44.7  613  139-900   424-1066(1066)
  6 3v98_A Arachidonate 5-lipoxyge   1.0       1       1 1334.4  50.1  639  103-900    41-691 (691)
  7 3fg1_A Allene oxide synthase-l   1.0       1       1 1325.5  45.6  642  102-900    25-696 (696)
  8 3vf1_A 11R-lipoxygenase; LOX,    1.0       1       1 1311.5  45.2  637  103-900    39-698 (698)
  9 3rde_A Arachidonate 12-lipoxyg   1.0       1       1 1261.8  29.9  553  199-900    15-573 (573)
 10 3d3l_A Arachidonate 12-lipoxyg   1.0       1       1 1158.0  21.2  494  305-900    13-509 (541)

No 1  
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=2153.15  Aligned_cols=824  Identities=46%  Similarity=0.830  Sum_probs=787.1

Q ss_pred             EEEEEEEEEEEEECCCCCCCCCC---------------------CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCC---
Q ss_conf             02589899999421457665554---------------------444431000025992899997510179988852---
Q 002617           66 KSIKVKAVVTVKPTVGGFLSNIS---------------------LDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK---  121 (900)
Q Consensus        66 ~~~~~~~~v~~~~~~~~~~~~~~---------------------~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~---  121 (900)
                      +..++||+||||+++++++++..                     +++.+|+++|++|++|+|||||+++||+||+||   
T Consensus         7 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~   86 (864)
T 2iuk_A            7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGK   86 (864)
T ss_dssp             -CCCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEE
T ss_pred             CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf             88778999999864635656633234455433333212334444442014477750680799999651379999876787


Q ss_pred             -EECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEEECCCCCCCCCCCCC
Q ss_conf             -0014441235889997358999996028999526999984689850110289930699-72899636564458989855
Q 002617          122 -STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQK  199 (900)
Q Consensus       122 -~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~-g~i~F~CnsWv~~~~~~~~~  199 (900)
                       ++|++|+.+.....+++++|+++|.||++||+||||+|+|+|++||||++|+|+++|+ |.+||+||||||++++|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~  166 (864)
T 2iuk_A           87 EVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKN  166 (864)
T ss_dssp             EEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf             56001435689868777279999998405679863599883798714898899813789986898537630678889988


Q ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf             18961331157899866689999999977259976644568143113446899999988666556899-88997764578
Q 002617          200 RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRT  278 (900)
Q Consensus       200 riff~n~~yLp~~tp~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg-~~~pyPRR~rt  278 (900)
                      ||||+||+|||++||++|+++||+||++|||||+||||+||||||||||||||+||++++  |||||| ++|||||||||
T Consensus       167 RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rt  244 (864)
T 2iuk_A          167 RIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRT  244 (864)
T ss_dssp             EEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECC
T ss_pred             CEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCCCCCCC
T ss_conf             466268874864476889999999999853789876650463010345403789666888--863689888889865557


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC--C-CCCCCCCHHHHHHHHCCCCCC
Q ss_conf             9999999997566568985598886671111120134699999855432211036--9-999999988889874068779
Q 002617          279 GRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFV--D-PDLGFPYFSAIDALFNEGVNL  355 (900)
Q Consensus       279 gr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~--~-~~~~f~~f~di~~ly~~~~~~  355 (900)
                      ||+|+++||.+|+|.. +||||||||+++|.++|.+++++++++.++|+++++++  . +..+|++|+||++||++|++|
T Consensus       245 gr~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~l  323 (864)
T 2iuk_A          245 GRERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKL  323 (864)
T ss_dssp             CCCBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEEC
T ss_pred             CCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             9898888987445466-778987565722388887888999998779999988412356767789999999998556667


Q ss_pred             CCCCCCCCHHCH--HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCC
Q ss_conf             986222200002--389898841148742234674133236446536299997774089941110134689899999776
Q 002617          356 PPLKQEGFWNTL--LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEI  433 (900)
Q Consensus       356 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~  433 (900)
                      |..    .+++.  ++.+++.++++++.+++||+|++|+.|+++|++|+|||||+|||+||++|+||++||++|+|||++
T Consensus       324 ~~~----~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~  399 (864)
T 2iuk_A          324 PTD----ILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTL  399 (864)
T ss_dssp             CHH----HHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCHHH
T ss_pred             CHH----HHCCCCCHHHHHHHHHCCCCCHHCCCCCCEECCCCHHHHCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHH
T ss_conf             134----4213474999999864033100027996420255011116499999986188955543001069734477544


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEC
Q ss_conf             79999866399999750895549999844948895166434720010026898411122018865789914468999407
Q 002617          434 YGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTR  513 (900)
Q Consensus       434 yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~  513 (900)
                      ||+++|+||++||+..++| +||++|+++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||++
T Consensus       400 yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqLs~  478 (864)
T 2iuk_A          400 YGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSK  478 (864)
T ss_dssp             HCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             CCCCCCCCCHHHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCCCCEEEEEEEEEC
T ss_conf             1785563679999611378-769999866987995450430641132156788620235578998689977679999527


Q ss_pred             CCCCCCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCC
Q ss_conf             9999999--97414518999988127999999997322235677775521012224799986146786575112034210
Q 002617          514 PPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHF  591 (900)
Q Consensus       514 ~~~~~~~--~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHf  591 (900)
                      |++++++  ++++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.|||
T Consensus       479 p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHf  558 (864)
T 2iuk_A          479 PHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHY  558 (864)
T ss_dssp             CCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGG
T ss_pred             CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf             98876666778885898887777418999999999888899999886620257889999997124886573677657888


Q ss_pred             CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             10012328887603478841123568864599999999701577886677447885699878999987543355578662
Q 002617          592 RYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFA  671 (900)
Q Consensus       592 r~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYr  671 (900)
                      |+||+||++||+.|||++|++|++|++|+++|||++++|++ |+|++++||+||++|||+++|+++|||++|+|||||||
T Consensus       559 r~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdYpYa  637 (864)
T 2iuk_A          559 RDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYA  637 (864)
T ss_dssp             TTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCCHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             87888789999734088871122126761079999999735-77740338488885698777766665411247788754


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCC
Q ss_conf             11389999999989874430256554535787899999999620688888999999879956799987230112443322
Q 002617          672 NDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHA  751 (900)
Q Consensus       672 dDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P~l~T~~eLv~~lT~iIf~aSaqHA  751 (900)
                      +|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+|||
T Consensus       638 dDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSaqHA  717 (864)
T 2iuk_A          638 VDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHA  717 (864)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHH
T ss_conf             02799999999999999998758812203789999999999725788777788887767799999986523230441245


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             22456630022269964334677899999906888741050889970399968999999999963178999754467679
Q 002617          752 AVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIE  831 (900)
Q Consensus       752 AVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~  831 (900)
                      |||||||+|+||+||+|++||+|||++  |+.++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|++
T Consensus       718 AVNFgQydy~gfvPN~P~~~r~p~P~~--G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~  795 (864)
T 2iuk_A          718 AVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERET  795 (864)
T ss_dssp             HHHTTHHHHHTSTTTSCCCCCSCCCCT--TSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCCSC
T ss_pred             HHCCCCCHHHCCCCCCCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             440263212144678975556789999--854476653170999988688999999999999998427888531466676


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             898885789999999999999999998652189421136898667820004799999876887743249
Q 002617          832 PAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       832 ~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      +.|++|+++++|+++|+++|++||+.|++||++++||||+||+++||+||+|+|++|||||||||||||
T Consensus       796 ~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI  864 (864)
T 2iuk_A          796 PNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI  864 (864)
T ss_dssp             TTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             222358789999999999999999999998668123204788787710048888788665787873569


No 2  
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...
Probab=1.00  E-value=1  Score=2120.10  Aligned_cols=823  Identities=45%  Similarity=0.810  Sum_probs=787.1

Q ss_pred             EEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCC----EECCCCCCCCCCCCCCCEEE
Q ss_conf             02589899999421457665554444431000025992899997510179988852----00144412358899973589
Q 002617           66 KSIKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQY  141 (900)
Q Consensus        66 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~y  141 (900)
                      +..+|||+||||++++++++ . .++.+|+++|++|++|+|||||+++||+||+||    ++|++|+.+.....+++++|
T Consensus         4 ~~~~~~~~v~~~~~~~l~~~-~-~~~~~d~~~~~~g~~~~l~lvs~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~   81 (839)
T 1f8n_A            4 AGHKIKGTVVLMPKNELEVN-P-DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAF   81 (839)
T ss_dssp             --CEEEEEEEEEECC--------------CGGGGTTTTEEEEEEEEEEECTTSSEEECCCEECCEEECCCSCCCTTCEEE
T ss_pred             CCCEEEEEEEEEECCCCCCC-C-CCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             78578999999962435646-6-663024466651681799999753489899876787550024356898677771699


Q ss_pred             EEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf             99996028999526999984689850110289930699-72899636564458989855189613311578998666899
Q 002617          142 ESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRY  220 (900)
Q Consensus       142 ~v~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~-g~i~F~CnsWv~~~~~~~~~riff~n~~yLp~~tp~~L~~~  220 (900)
                      +++|.||++||+||||+|+|+|++||||++|+|+++|+ |.+||+||||||++++|+.+||||+|++|||++||++|+++
T Consensus        82 ~~~f~~~~~fg~pga~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~riff~n~~ylp~~tp~~l~~~  161 (839)
T 1f8n_A           82 NIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSY  161 (839)
T ss_dssp             EEEEECCGGGCCEEEEEEEECSSSCEEEEEEEECC----CCEEEEEEEEECBGGGCSSCEEEECSCCCCGGGSCGGGHHH
T ss_pred             EEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHH
T ss_conf             99998414669850699883798714898999804788875898616641778789887275258620677896677766


Q ss_pred             HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999977259976644568143113446899999988666556899-88997764578999999999756656898559
Q 002617          221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVP  299 (900)
Q Consensus       221 R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg-~~~pyPRR~rtgr~~~~~dp~~e~~~~~~yvP  299 (900)
                      |++||++|||||+||||+||||||||+|||||+||++++++|||||| +++||||||||||+++++||.+|+|.+.+|||
T Consensus       162 r~~el~~lrG~g~G~rk~~driYdyd~ynDlg~pd~~~~~~rpvlggs~~~Pyprr~rtgr~~~~~d~~~e~~~~~~yvP  241 (839)
T 1f8n_A          162 REEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVP  241 (839)
T ss_dssp             HHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCCSSCCCC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             69999984068865113312010043431456877674435653589988888874556999878899866776577889


Q ss_pred             CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHH--HHHHHHH
Q ss_conf             8886671111120134699999855432211036--99999999888898740687799862222000023--8989884
Q 002617          300 RDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFV--DPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLL--PRLVKAI  375 (900)
Q Consensus       300 rDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~--~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~--~~~~~~~  375 (900)
                      |||+|++.|.++|.+++++++++.++|.++++++  .+..+|++|+||++||++|++||..    ..+...  +.+.+.+
T Consensus       242 rDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~di~~ly~~g~~l~~~----~~~~~~p~~~~~~i~  317 (839)
T 1f8n_A          242 RDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELY  317 (839)
T ss_dssp             GGGSCCCSSGGGCGGGHHHHHHHTHHHHHHHHHHTTCSCSSCCSHHHHHGGGTTCEECCHH----HHHHHTTSTTGGGSC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHH----HHHCCCCHHHHHHHH
T ss_conf             8645573206668888999999876888887741556666667899999776436767045----540237288999987


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             11487422346741332364465362999977740899411101346898999997767999986639999975089554
Q 002617          376 EDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMIS  455 (900)
Q Consensus       376 ~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~t  455 (900)
                      ++.++.++|||+|++|+.|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++|++  ++| +|
T Consensus       318 ~~~~~~~l~~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ldp~~yg~~~s~it~e~i~--l~g-~t  394 (839)
T 1f8n_A          318 RTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG-YT  394 (839)
T ss_dssp             EECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSCSCCEECCSSSCCCCSCHHHHCCCCCCCCGGGCC--CTT-CC
T ss_pred             HCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHHCCCCHHHEECCCCCCCCCCCHHHCCCCCCCCCHHHHH--CCC-CC
T ss_conf             415421003898511004512111679999998708996430053117973447765508855634288863--167-53


Q ss_pred             HHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCC--CCCEEEECCCCCC
Q ss_conf             99998449488951664347200100268984111220188657899144689994079999999--9741451899998
Q 002617          456 VEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHST  533 (900)
Q Consensus       456 l~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~~--~~~~VftP~d~~~  533 (900)
                      |++|+++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++  ++++||||+|+++
T Consensus       395 l~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~tLffl~~dg~L~PlAIqL~~~~~~~~~~~~~~~vftP~dd~~  474 (839)
T 1f8n_A          395 MDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGV  474 (839)
T ss_dssp             HHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCSCCCCCEEECCCSSHH
T ss_pred             HHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECCCCCCC
T ss_conf             99998659989941515425302321557895313355789987899776799996479987765677788589887777


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf             81279999999973222356777755210122247999861467865751120342101001232888760347884112
Q 002617          534 ECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIE  613 (900)
Q Consensus       534 ~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie  613 (900)
                      ++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|
T Consensus       475 ~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gGiie  554 (839)
T 1f8n_A          475 ESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIE  554 (839)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             76089999999998888999998866303577899999971138865846777779999998888999973318887122


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             35688645999999997015778866774478856998789999875433555786621138999999998987443025
Q 002617          614 SSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYY  693 (900)
Q Consensus       614 ~~f~~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY  693 (900)
                      ++|++|+++|||++++|++ |+|++++||+||++|||+++|+++|||++|+|||||||+|||+||+||++||++||++||
T Consensus       555 ~~fs~g~~~~el~s~~yk~-w~f~~~~lP~DL~~RG~~~~D~~~p~gl~l~ipdYpYadDgL~iW~AIk~~V~~yv~~YY  633 (839)
T 1f8n_A          555 TTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYY  633 (839)
T ss_dssp             HHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSTTCHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             EECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             3205761069999999725-777313384888866987777777654000267886420079999999999999999874


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             65545357878999999996206888889999998799567999872301124433222245663002226996433467
Q 002617          694 PDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARC  773 (900)
Q Consensus       694 ~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~  773 (900)
                      ++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+
T Consensus       634 ~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQydy~gfvPN~P~~~r~  713 (839)
T 1f8n_A          634 ARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRR  713 (839)
T ss_dssp             CSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTCCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCSCBCS
T ss_pred             CCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHCC
T ss_conf             98033137899999999997057877777888877667999999865221214411454403745100426788766567


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             78999999068887410508899703999689999999999631789997544676798988857899999999999999
Q 002617          774 NIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLME  853 (900)
Q Consensus       774 p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~  853 (900)
                      |||++  |+.++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|++|+++++|+++|+++|++
T Consensus       714 p~P~~--g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~yLG~~~~~~~~~d~~~~~a~~rF~~~L~~  791 (839)
T 1f8n_A          714 LLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKE  791 (839)
T ss_dssp             CCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             89999--8544766543669999887888999999999999985279875335665752333587899999999999999


Q ss_pred             HHHHHHHHCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             999986521894211-36898667820004799999876887743249
Q 002617          854 LEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       854 Ie~~I~~RN~~~~~k-nr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      ||+.|++||+++++| ||+|||++||+||+|++++|||||||||||||
T Consensus       792 Ie~~I~~RN~d~~lk~nr~g~~~~PY~~L~P~s~~g~t~~~IPNSIsI  839 (839)
T 1f8n_A          792 IEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI  839 (839)
T ss_dssp             HHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             999999986572022125788777710158888788665787883579


No 3  
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=2116.59  Aligned_cols=824  Identities=46%  Similarity=0.823  Sum_probs=786.9

Q ss_pred             CEEEEEEEEEEEEECCCCCCCCC------------CCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCC----EECCCCC
Q ss_conf             20258989999942145766555------------4444431000025992899997510179988852----0014441
Q 002617           65 EKSIKVKAVVTVKPTVGGFLSNI------------SLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYA  128 (900)
Q Consensus        65 ~~~~~~~~~v~~~~~~~~~~~~~------------~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~~----~~~~~~~  128 (900)
                      .+..+|||+||||++++++++++            ..++.+|+++ ++|++|+|||||+++| +||+||    ++|++|+
T Consensus         6 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~g~~v~lqlvs~~~~-~~~~~~~~~~~~~~~~~   83 (853)
T 2iuj_A            6 HKGQKIKGTMVVMQKNVLDINSITSVDGIVGTGLDFLGSALDTVT-FLASSISIQLISATKA-DGGKGKVGKATNLRGKI   83 (853)
T ss_dssp             --CCEEEEEEEEEEGGGSSSSCCCCC--------------CCCCC-CCSSSEEEEEEEEEEE-SSSSEEEEEEEECCCCC
T ss_pred             CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCEEEEEEEEEEEC-CCCCCCCCCCCCCCCCC
T ss_conf             788678999999862534656632233322333333443000002-4277279999996547-99996668766001445


Q ss_pred             CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCC-CCEEEEECCCCCCCCCCCCCEEEEECCC
Q ss_conf             235889997358999996028999526999984689850110289930699-7289963656445898985518961331
Q 002617          129 RKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKL  207 (900)
Q Consensus       129 ~~~~~~~~~~~~y~v~f~~~~~fG~pgAv~v~n~~~~e~fl~~i~l~~~p~-g~i~F~CnsWv~~~~~~~~~riff~n~~  207 (900)
                      ++ ....+++++|+|+|.||++||+||||+|+|+|++||||++|+|+++|+ |.+|||||||||++++|+.+||||+|++
T Consensus        84 ~~-~~~~~~~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~~g~~~F~c~sWv~~~~~~~~~riff~n~~  162 (853)
T 2iuj_A           84 TL-PTIGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNT  162 (853)
T ss_dssp             CC-SSCCTTEEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTTSCCEEEEEEEEECBTTSCSSCEEEECSCC
T ss_pred             CC-CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
T ss_conf             78-87877845899974244457972599998268850057689992058997389870553357878988759972786


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             15789986668999999997725997664456814311344689999998866655689988997764578999999999
Q 002617          208 YLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQ  287 (900)
Q Consensus       208 yLp~~tp~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp  287 (900)
                      |||++||++|++||++||++|||||+||||+||||||||+|||||+||++++++||||||+++||||||||||+++++||
T Consensus       163 ylp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlg~pd~~~~~~rpvlgGs~~Pyprr~rtgr~~~~~d~  242 (853)
T 2iuj_A          163 YLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSALPYPRRGRTGRGKTRKDP  242 (853)
T ss_dssp             CCGGGSCTTTHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCCGGGCTTSCCCCBSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             67566888899999999999527897654545605651110358887667543575458987988765557999766786


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             756656898559888667111112013469999985543221103--699999999888898740687799862222000
Q 002617          288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWN  365 (900)
Q Consensus       288 ~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~--~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~  365 (900)
                      .+|+|...+||||||||+++|.++|.++++++++|.++|.+++++  +.+..+|++|+||++||++|++||..    .++
T Consensus       243 ~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~di~~ly~~g~~l~~~----~~~  318 (853)
T 2iuj_A          243 NSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPTN----FLS  318 (853)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHTTHHHHHHHHHHTTSSCSSCCSHHHHHHHHHHCCCCCHH----HHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHH----HHC
T ss_conf             5446666788897655462127778787899999876999988850567767789999999987545667044----430


Q ss_pred             CH--HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             02--3898988411487422346741332364465362999977740899411101346898999997767999986639
Q 002617          366 TL--LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITT  443 (900)
Q Consensus       366 ~~--~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~  443 (900)
                      ++  ++.+.+.++++++++||||.|+++++|+++|++|+|||||+|||+||++|++|++||++|+|||++||+++|+||+
T Consensus       319 ~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ldp~~yg~~~s~it~  398 (853)
T 2iuj_A          319 NITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITK  398 (853)
T ss_dssp             HSCCCTTSSTTTTCCSSSCCCCCCCGGGTSCTTTTTSHHHHHHTTTSSSSTTCCEECCSSSCCCCSCTTTTCCCCCCCCT
T ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCHHHHHHHHHCCCCCHHEEECCCCCCCCCCCHHHCCCCCCCCCH
T ss_conf             34839999987522431001389974341461211162999999862889611124200686344775441875564679


Q ss_pred             HHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCC--C
Q ss_conf             99997508955499998449488951664347200100268984111220188657899144689994079999999--9
Q 002617          444 ELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--Q  521 (900)
Q Consensus       444 e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~yA~~~Lffl~~dG~L~PIAIqL~~~~~~~~~--~  521 (900)
                      +||+..++| +||++|+++|||||+||||++|||++++|. ++++.|||+||||++++|+|+||||||+++++++++  +
T Consensus       399 e~i~~~l~g-~tl~~al~~grLFi~Dy~d~~lp~~~~in~-~~~~~yAp~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~  476 (853)
T 2iuj_A          399 EHLEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYGP  476 (853)
T ss_dssp             TTTSCSSCC-SCHHHHHHTTCEEECCCSTTTGGGHHHHHT-SSCCCCBCCEEEEECTTSCEEEEEEEEEECCTTCGGGCC
T ss_pred             HHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCHHHCCCC-CCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCCCCC
T ss_conf             998610378-769999765998995144652620102588-886764456799987999675799996469987765667


Q ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHH
Q ss_conf             74145189999881279999999973222356777755210122247999861467865751120342101001232888
Q 002617          522 WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLA  601 (900)
Q Consensus       522 ~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lA  601 (900)
                      +++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++|
T Consensus       477 ~~~VftP~dd~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~A  556 (853)
T 2iuj_A          477 VSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLA  556 (853)
T ss_dssp             EEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHH
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             78758988877775089999999998888899998755102577899999972248866841655368888688888999


Q ss_pred             HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             76034788411235688645999999997015778866774478856998789999875433555786621138999999
Q 002617          602 RQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAI  681 (900)
Q Consensus       602 R~~LI~~gGiie~~f~~G~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI  681 (900)
                      |+.|||+||++|++|++|+++|||++++|++ |+|++++||+||++|||+++|+++|||+||+|||||||+|||+||+||
T Consensus       557 R~~LI~~gGiie~~~~~G~~~~el~s~~yk~-w~f~~~~LP~DL~~RGv~~~D~~~p~gl~l~i~dYpYadDgL~iW~AI  635 (853)
T 2iuj_A          557 RKSLVNADGIIEKTFLWGRYSLEMSAVIYKD-WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAI  635 (853)
T ss_dssp             HHHTSSTTCHHHHHSTTGGGHHHHHHHHHTT-CCSGGGSHHHHHHHHTSEEECTTSTTSEEESSTTCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             9743188875002025760069999999715-777424485888856987777777653001366787641279999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
Q ss_conf             99898744302565545357878999999996206888889999998799567999872301124433222245663002
Q 002617          682 KQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYG  761 (900)
Q Consensus       682 ~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~  761 (900)
                      ++||++||++||++|++|++|.|||+||+||+++||+|+++++|||+|+|+++||++||+|||+||+||||||||||+|+
T Consensus       636 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~iIf~aSaqHAAVNfgQydy~  715 (853)
T 2iuj_A          636 KSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQYPYG  715 (853)
T ss_dssp             HHHHHHHHHHHCSCHHHHTTCHHHHHHHHHHHHTTTGGGTTCTTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred             HHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCCCHH
T ss_conf             99999999986488110158889999999998157777666788877667999998864553424421454403744000


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCHHH
Q ss_conf             22699643346778999999068887410508899703999689999999999631789997544676798-98885789
Q 002617          762 GYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEP-AWREDPVI  840 (900)
Q Consensus       762 gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~-~~~~d~~~  840 (900)
                      ||+||+|++||+|||++  |+.++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++ .|++|+++
T Consensus       716 gfvPN~P~~~r~p~P~~--g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~yLG~~~~~~~~~~d~~~  793 (853)
T 2iuj_A          716 GLILNRPTISRRFMPEK--GSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGP  793 (853)
T ss_dssp             SSTTTSCCCBCSCCCCS--SCHHHHHHHHCHHHHHHTTBCCHHHHHHHHHHHHHTTCBCTTCCBTTTCSSCTTSCSCHHH
T ss_pred             CCCCCCCHHHCCCCCCC--CCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             44678875546799999--8433665531709999886887999999999999973799886515655763112368789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             999999999999999998652189421136898667820004799999876887743249
Q 002617          841 NAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       841 ~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      ++|+++|+++|++||+.|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus       794 ~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s~~g~t~~~IPNSIsI  853 (853)
T 2iuj_A          794 LEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI  853 (853)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             999999999999999999998568033224788888813568888788665787873569


No 4  
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*
Probab=1.00  E-value=1  Score=1408.27  Aligned_cols=633  Identities=26%  Similarity=0.402  Sum_probs=565.9

Q ss_pred             CCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCC---CCEEEEEEEEECCC
Q ss_conf             928999975101799888520014441235889997358999996028999526999984689---85011028993069
Q 002617          102 KSLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHH---KEMYLKDIVLDGLP  178 (900)
Q Consensus       102 ~~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgAv~v~n~~~---~e~fl~~i~l~~~p  178 (900)
                      ..|.++|+.+.-  .  .++..|+      .-..+...+|++  .++.+||+|++|+|+|.|.   .+|||++|+|++ |
T Consensus        19 a~V~i~L~G~~G--~--s~~~~L~------~FerG~~d~F~v--~~~~dlG~l~~I~I~~d~~g~~~~Wfl~~V~V~~-p   85 (662)
T 1lox_A           19 NKVELWLVGQHG--E--VELGSCL------RPTRNKEEEFKV--NVSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQA-L   85 (662)
T ss_dssp             SEEEEEEEESSC--E--EEEEEEE------CCCTTCEEEEEE--ECSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEE-S
T ss_pred             CCEEEEEEECCC--C--CCCEECC------CCCCCCCCEEEE--EECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC-C
T ss_conf             817999997999--7--0585677------737999218999--8237788652899995899999872884899943-8


Q ss_pred             C--C-CEEEEECCCCCCCCCCCCCEEEEEC-CCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf             9--7-2899636564458989855189613-3115789-98666899999999772599766445681431134468999
Q 002617          179 N--G-PVNVTCNSWLHSKHDNKQKRVFFTN-KLYLPSQ-TPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD  253 (900)
Q Consensus       179 ~--g-~i~F~CnsWv~~~~~~~~~riff~n-~~yLp~~-tp~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~  253 (900)
                      +  | .++|+|||||++     .+||||+| ++|||++ ||++|+++|++||+++|           |+|||++||| | 
T Consensus        86 ~~~g~~~~F~Cn~WL~~-----~~rvff~~G~~~Lp~~D~~~~l~~~R~~eL~~~~-----------~~Y~~~~y~d-G-  147 (662)
T 1lox_A           86 GAAEDKYWFPCYRWVVG-----DGVQSLPVGTGCTTVGDPQGLFQKHREQELEERR-----------KLYQWGSWKE-G-  147 (662)
T ss_dssp             SSCCCCEEEEEEEEECS-----SCCEEEECTTCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST-T-
T ss_pred             CCCCCEEEEEECEEECC-----CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHH-----------CEEEECCCCC-C-
T ss_conf             98995799982207557-----9879970674054025577066665399998630-----------5774067579-9-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99988666556899889977645789999999997566568985598886671111120134699999855432211036
Q 002617          254 PDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFV  333 (900)
Q Consensus       254 Pd~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~  333 (900)
                                                ||++. ||.+.     .||||||+|++.|..+|.+++++++++.+   ++++++
T Consensus       148 --------------------------~p~~~-d~~~~-----~~lP~de~f~~~k~~~f~~~~~~~~~~~~---~~~~~~  192 (662)
T 1lox_A          148 --------------------------LILNV-AGSKL-----TDLPVDERFLEDKKIDFEASLAWGLAELA---LKNSLN  192 (662)
T ss_dssp             --------------------------SCCEE-SCSSG-----GGSCGGGSCCHHHHHHHC--------------CHHHHG
T ss_pred             --------------------------CCCCC-CCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHC
T ss_conf             --------------------------96545-75544-----56994102374203345565688899999---999860


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             99999999888898740687799862222000023898988411487422346741332364465362999977740899
Q 002617          334 DPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLN  413 (900)
Q Consensus       334 ~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~N  413 (900)
                       ...+|++|+||++||..+.            +.   +.+.+                   .++|++|++||||+|||+|
T Consensus       193 -~~~~~~s~~d~~~lf~~~~------------~~---~~~~~-------------------~~~W~~D~~F~~q~L~G~N  237 (662)
T 1lox_A          193 -ILAPWKTLDDFNRIFWCGR------------SK---LARRV-------------------RDSWQEDSLFGYQFLNGAN  237 (662)
T ss_dssp             -GGSCCSSGGGGGGSC--CC------------CH---HHHHH-------------------HHHTTCHHHHHHHHHHSSC
T ss_pred             -CCCCCCCHHHHHHHHHCCC------------CC---CCHHH-------------------HHHHCCCHHHHHHHHCCCC
T ss_conf             -5788667999998742256------------65---30345-------------------5432060999999864899


Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCC--C
Q ss_conf             41110134689899999776799998663999997508955499998449488951664347200100268984111--2
Q 002617          414 PYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLY--G  491 (900)
Q Consensus       414 P~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~y--A  491 (900)
                      |++|+||+++|++            ++||++|++   +| +||++|+++|||||+|||+  |+.+ ++|.++++++|  |
T Consensus       238 P~~I~~~~~~p~~------------~~vt~~~v~---~g-~tl~~a~~~~~lfi~Dy~~--l~~~-~~~~~~~~~~y~~A  298 (662)
T 1lox_A          238 PMLLRRSVQLPAR------------LVFPPGMEE---LQ-AQLEKELKAGTLFEADFAL--LDNI-KANVILYCQQYLAA  298 (662)
T ss_dssp             TTSCEECSSCCTT------------CCCCTTCHH---HH-HHHHHHHHTTCEEEEECGG--GTTC-CCCEETTEECCCCC
T ss_pred             CHHEEECCCCCCC------------CCCCHHHHC---CC-CCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCCCCCCCC
T ss_conf             6200244668743------------679988956---78-7799998649889983243--3547-66655776331115


Q ss_pred             CCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             20188657899144689994079999999974145189999881279999999973222356777755210122247999
Q 002617          492 SRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVI  571 (900)
Q Consensus       492 ~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~I  571 (900)
                      |+||||++++|+|+||||||+.|..++++  ++||||+|   ++|.|+|||+||++||+++||+++||++||+++|||+|
T Consensus       299 p~~lf~l~~~g~L~PlAIql~~p~~~~~~--~~vftP~d---~~~~W~lAK~~v~~~D~~~Hqli~Hll~TH~~~E~~~i  373 (662)
T 1lox_A          299 PLVMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTD---PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTV  373 (662)
T ss_dssp             CEEEEEECTTSCEEEEEEECSCCCTTSCC--CCEECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHH
T ss_pred             CEEEEEECCCCCEEEEEEEEECCCCCCCC--CCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             46999988999786799997379887788--87687899---96389999999997788888888876456777889999


Q ss_pred             HHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHCCC
Q ss_conf             861467865751120342101001232888760347884112356886459-9999999701577886677447885699
Q 002617          572 ATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYS-MEFSSVAYDKQWRFDHEALPKDLISRGL  650 (900)
Q Consensus       572 At~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~-~elss~~Y~~~w~f~~~~lP~DL~~RG~  650 (900)
                      ||+||||.+|||||||.||||+||+||++||+.|||+||++|++|++|.++ ++|++++|++ |+|++++||+||++|||
T Consensus       374 At~R~Ls~~HPi~kLL~PH~r~tl~IN~~AR~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~  452 (662)
T 1lox_A          374 ATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAF-LTYRSFCPPDDLADRGL  452 (662)
T ss_dssp             HHHHHCCTTSHHHHHHGGGGTTHHHHHHHHTTTTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGSHHHHHHHTTC
T ss_pred             HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCC-CCCCCCCCCHHHHHCCC
T ss_conf             86225886574124334788768877799997542888711232058842289999999716-75431357654564676


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             87899998754335557866211389999999989874430256554535787899999999620688888999999879
Q 002617          651 AVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLK  730 (900)
Q Consensus       651 a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P~l~  730 (900)
                      .            .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+||++|+
T Consensus       453 ~------------~i~~YpY~~Dgl~iW~aI~~~V~~yv~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~p~~l~  520 (662)
T 1lox_A          453 L------------GVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQ  520 (662)
T ss_dssp             T------------TCTTCHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHTCHHHHHHHHHHHTTTTTSGGGGTCCSSCC
T ss_pred             C------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             6------------5667754424899999999999999986379800024778999999999855577775689997566


Q ss_pred             CHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHH
Q ss_conf             95679998723011244332222456630022269964334677899999906888741050889970399968999999
Q 002617          731 TPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVM  810 (900)
Q Consensus       731 T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m  810 (900)
                      |+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ | .        .+++++|++||++.||+.+|
T Consensus       521 t~~~Li~~lT~iI~~aS~~HAAVNfgQ~~y~g~~PN~P~~~r~p~P~~-k-~--------~~~~~~l~~lP~~~~a~~~~  590 (662)
T 1lox_A          521 SVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTT-K-D--------ATLETVMATLPNLKQSSLQM  590 (662)
T ss_dssp             SHHHHHHHHHHHHHHTTHHHHHHHTTHHHHSSSGGGSCSCCSSCCCSS-S-C--------CCHHHHHHHSCCHHHHHHHH
T ss_pred             CHHHHHHHHHEEEECCCHHHHHHCCCCCHHCCCCCCCCHHHCCCCCCC-C-C--------CCHHHHHHHCCCHHHHHHHH
T ss_conf             599999875343011212466551473100045668853326799988-8-9--------89889988698788999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf             99996317899975446767989888578999999999999999999865218942113689866782000479999987
Q 002617          811 AILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVT  890 (900)
Q Consensus       811 ~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t  890 (900)
                      +++++||+|++||+|||+|++ .|+.|+++++|+++|+++|++||++|++||+++         .+||+||+|+      
T Consensus       591 ~~~~~LS~~~~de~~LG~~~~-~~~~d~~~~~a~~~F~~~L~~ie~~I~~rN~~~---------~~PY~~L~P~------  654 (662)
T 1lox_A          591 SIVWQLGRDQPIMVPLGQHQE-EYFSGPEPRAVLEKFREELAIMDKEIEVRNEKL---------DIPYEYLRPS------  654 (662)
T ss_dssp             HHHHHTT--CCCCCBTTCCCC-CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT------
T ss_pred             HHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CCCCEEECCC------
T ss_conf             999996258877643146773-112587899999999999999999999970799---------9882247988------


Q ss_pred             CCCCCCCCCC
Q ss_conf             6887743249
Q 002617          891 GKGVPYSISI  900 (900)
Q Consensus       891 ~~gIPnSIsI  900 (900)
                        +|||||||
T Consensus       655 --~ipnSisI  662 (662)
T 1lox_A          655 --IVENSVAI  662 (662)
T ss_dssp             --TSBSSCCC
T ss_pred             --CCCCCCCC
T ss_conf             --98763139


No 5  
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=1.00  E-value=1  Score=1337.44  Aligned_cols=613  Identities=25%  Similarity=0.457  Sum_probs=551.1

Q ss_pred             EEEEEEEEECCCCCCEEEEEEEECC------CCCEEEEEEEEECCCCC-CEEEEECCCCCCCCCCCCCEEEEEC-CCCCC
Q ss_conf             5899999602899952699998468------98501102899306997-2899636564458989855189613-31157
Q 002617          139 MQYESEFEVPSGFGEIGAILVENEH------HKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHDNKQKRVFFTN-KLYLP  210 (900)
Q Consensus       139 ~~y~v~f~~~~~fG~pgAv~v~n~~------~~e~fl~~i~l~~~p~g-~i~F~CnsWv~~~~~~~~~riff~n-~~yLp  210 (900)
                      ..|.++  + .++|.+-.|.|....      ...|||+.|+|.+.-.| ..+|+||+|+...       +.++. +|.||
T Consensus       424 d~F~v~--~-~~LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d-------~~lr~G~a~l~  493 (1066)
T 3dy5_A          424 EQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD-------MVLFPGEATLP  493 (1066)
T ss_dssp             EEEEEE--C-SCCSSEEEEEEECCCCC--CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSE-------EEECCSSCCCS
T ss_pred             CEEEEE--E-ECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHCCCC-------EEECCCCEEEC
T ss_conf             269999--7-1378733899997898877789973886899983899978997602405677-------17536721404


Q ss_pred             CCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             899-8666899999999772599766445681431134468999999886665568998899776457899999999975
Q 002617          211 SQT-PDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFS  289 (900)
Q Consensus       211 ~~t-p~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp~~  289 (900)
                      .+. .+.|+++|++||+.+|           +.|+|+.|.+ |.|.+       +.+.                     +
T Consensus       494 ~~d~~p~~~~~R~~EL~~rr-----------~~Y~w~~~~~-g~p~~-------~~~~---------------------~  533 (1066)
T 3dy5_A          494 FNEVPAIVSEQRQKELEQRK-----------LTYQWDYVSD-DMPGN-------IKAK---------------------T  533 (1066)
T ss_dssp             CSCCCHHHHHHHHHHHHHHH-----------HHSCEECSST-TSCCE-------ECCS---------------------S
T ss_pred             CCCCCHHHHHHHHHHHHHHH-----------HHEECCCCCC-CCCCC-------CCCC---------------------C
T ss_conf             56777689999999999877-----------5430676789-98641-------1445---------------------4


Q ss_pred             CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHH
Q ss_conf             66568985598886671111120134699999855432211036999999998888987406877998622220000238
Q 002617          290 EKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP  369 (900)
Q Consensus       290 e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~  369 (900)
                           ..+||+|+||+..|..||..+..++++...+   +++++. ..+|++|+|+++||....            +.  
T Consensus       534 -----~~~LP~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~d~~~~f~~~~------------~~--  590 (1066)
T 3dy5_A          534 -----HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLFTM-FENWDSYDDYHILYRNWI------------LG--  590 (1066)
T ss_dssp             -----TTTSCGGGSCCHHHHHHHHHHHHHHHTGGGT---SCC--------------------------------------
T ss_pred             -----HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCCC------------CC--
T ss_conf             -----2128800030022002467777788876434---334422-036467999999846788------------78--


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             98988411487422346741332364465362999977740899411101346898999997767999986639999975
Q 002617          370 RLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKE  449 (900)
Q Consensus       370 ~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~  449 (900)
                       +.+++                   ..+|++|+|||||+|||+||++||||+++|++            |+||++|++..
T Consensus       591 -~~~~v-------------------~~~W~~D~~F~~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~~~  638 (1066)
T 3dy5_A          591 -GTPNM-------------------ADRWHEDRWFGYQFLNGANPVILTRCDALPSN------------FPVTNEHVNAS  638 (1066)
T ss_dssp             ----------------------------CCSHHHHHHHHHTTSCCSSEEECSSCCTT------------CCCCTTTTTTT
T ss_pred             -CCHHH-------------------HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCC------------CCCCHHHHHHH
T ss_conf             -78778-------------------65503859999987648998137872346745------------67888999865


Q ss_pred             HCCCCCHHHHHHCCCEEEECCCCC--CC----CHHHHC------CCCCCCC--CC--CCCEEEEECCCCCEEEEEEEEEC
Q ss_conf             089554999984494889516643--47----200100------2689841--11--22018865789914468999407
Q 002617          450 IGGMISVEEAIKQKKLFILDYHDL--FL----PYVEKV------RQLKSTT--LY--GSRTIFFLTPAGTLRPIAIELTR  513 (900)
Q Consensus       450 l~g~~tl~~al~~grLFi~Dy~d~--~l----p~l~~i------n~~~g~~--~y--A~~~Lffl~~dG~L~PIAIqL~~  513 (900)
                      |++++||++||++|||||+|||++  ++    ||+++|      |.+++++  +|  ||+||||++++|+|+||||||+|
T Consensus       639 l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~p~~~~i~~~~~~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~~  718 (1066)
T 3dy5_A          639 LDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQ  718 (1066)
T ss_dssp             CCSSSCSHHHHTTSCEEEEECGGGTTCCCSSSCCCCTTC----------CCCCCBCCCCEEEEEECTTSCEEEEEEESSS
T ss_pred             CCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEEEEEC
T ss_conf             06898799998759999996455433243455201000222344545776554141375799998589986149999747


Q ss_pred             CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCC
Q ss_conf             99999999741451899998812799999999732223567777552101222479998614678657511203421010
Q 002617          514 PPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRY  593 (900)
Q Consensus       514 ~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~  593 (900)
                      +|+++    ++||||+|+  ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+
T Consensus       719 ~p~~~----~piftP~d~--~~~~W~lAK~~v~~~D~~~Hqlv~Hll~THlv~E~f~iAt~R~Ls~~HPi~kLL~PH~r~  792 (1066)
T 3dy5_A          719 EPGPE----NPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYG  792 (1066)
T ss_dssp             SCSSS----SCEECTTCS--SHHHHHHHHHHHHHHHHHHHHTCCCCCTTTHHHHHHHHHHHHHCCTTCHHHHHHHHHHTT
T ss_pred             CCCCC----CCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHH
T ss_conf             99998----975778999--865699999999755788888888873025778999999741399767445544066640


Q ss_pred             CCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             01232888760347884112356886-45999999997015778866774478856998789999875433555786621
Q 002617          594 TMEINGLARQALVNADGIIESSFSPG-KYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFAN  672 (900)
Q Consensus       594 Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrd  672 (900)
                      ||+||++||+.|||+||+||+++++| +++++|++++|++ |+|++++||+||++|||+++  +       .|||||||+
T Consensus       793 Tl~IN~~AR~~Li~~gG~id~~~~~g~~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~--~-------~l~~YpY~~  862 (1066)
T 3dy5_A          793 VLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKE-VNLQDYHLPNALKKRGVDDP--S-------KLPGFYYRD  862 (1066)
T ss_dssp             HHHHHHHTTTTTSSTTSSTTTSSSSTTTHHHHHHHHHHTT-CCGGGGCHHHHHHHTTCCCT--T-------TSCCCHHHH
T ss_pred             HHCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CEECCCCCCHHHHHCCCCCC--C-------CCCCCCHHH
T ss_conf             4113679895232899720244237752699999999833-72156778424665589773--3-------368982477


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHHHEEECCCC
Q ss_conf             138999999998987443025655453578789999999962068---8888999999-879956799987230112443
Q 002617          673 DGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGH---GDKKHEPWWP-VLKTPKDLIEIITTIVWVTSG  748 (900)
Q Consensus       673 DGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh---~d~k~~p~~P-~l~T~~eLv~~lT~iIf~aSa  748 (900)
                      |||+||+||++||++||++||++|++|++|.|||+||+||+++||   +|+++. ||| +|+|+++||++||+|||+||+
T Consensus       863 Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~-g~P~~l~t~~~Lv~~lT~iI~~aS~  941 (1066)
T 3dy5_A          863 DGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDH-GVPASFESREQLKEVLTSLVFTFSC  941 (1066)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTSCCCTTCCCC-CCCSSCCSHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCC
T ss_conf             699999999999999998638995020578999999999963466656777655-5665578899999887451201240


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             32222456630022269964334677899999906888741050889970399968999999999963178999754467
Q 002617          749 HHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGK  828 (900)
Q Consensus       749 qHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~  828 (900)
                      ||||||||||+|+||+||+|++||+|||++ ||..        +++++|++||++.||+.+|+++++||+|++||+|||+
T Consensus       942 qHAAVNfgQ~~~~~~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~~~~~~~~~~~LS~~~~de~~Lg~ 1012 (1066)
T 3dy5_A          942 QHAAVNFSQKDHYGFTPNAPAILRHPPPKK-KGEA--------TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGN 1012 (1066)
T ss_dssp             HHHHHHSTTC-------CCCSCBSSCCCSS-TTCC--------CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTC
T ss_pred             HHHHCCCCCCCCCCCCCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             233104575520114688854436899989-8888--------8777987689904408999999985578888623035


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             679898885789999999999999999998652189421136898667820004799999876887743249
Q 002617          829 EIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       829 ~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      |++++|+ |+++++|+++|+++|++||++|++||++.         ++||+||+|+        +|||||||
T Consensus      1013 y~~~~~~-d~~~~~a~~~F~~~L~~i~~~I~~RN~~~---------~~pY~~L~P~--------~IpnSIsI 1066 (1066)
T 3dy5_A         1013 YSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL---------EVPYIYLLPE--------RIPNGTAI 1066 (1066)
T ss_dssp             CTTSCCC-SHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------SSCCCTTSTT--------SCBSSCCC
T ss_pred             CCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCEEEC
T ss_conf             7841137-88999999999999999999999971799---------9884007988--------88763059


No 6  
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B
Probab=1.00  E-value=1  Score=1334.36  Aligned_cols=639  Identities=28%  Similarity=0.465  Sum_probs=565.1

Q ss_pred             CEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCC-CEEEEEEEEECCCCCCEEEEEEEECC---CCCEEEEEEEEECCC
Q ss_conf             28999975101799888520014441235889997-35899999602899952699998468---985011028993069
Q 002617          103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDG-NMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLP  178 (900)
Q Consensus       103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~y~v~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p  178 (900)
                      .|.+.|+.+.-+  +  +...|+.     .....| ...|.++  ++.++|.+-.|.|....   ...|||+.|+|.+ +
T Consensus        41 ~V~I~L~G~~G~--S--~~~~L~~-----~~FeRG~~D~F~v~--~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~-~  108 (691)
T 3v98_A           41 YIYLSLVGSAGC--S--EKHLLDK-----GSFERGAVDSYDVT--VDEELGEIQLVRIEKRKYGSNDDWYLKYITLKT-P  108 (691)
T ss_dssp             EEEEEEEESSCB--C--CCEECCS-----SCBCTTCEEEEEEC--CSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEC-T
T ss_pred             EEEEEEEECCCC--E--EEEEECC-----CCCCCCCEEEEEEE--ECCCCCCCEEEEEEECCCCCCCCEEEEEEEEEC-C
T ss_conf             207999978996--6--4388168-----76357976599998--036778855999997898799985870799987-9


Q ss_pred             CC-CEEEEECCCCCCCCCCCCCEEEEEC-CCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             97-2899636564458989855189613-3115789-9866689999999977259976644568143113446899999
Q 002617          179 NG-PVNVTCNSWLHSKHDNKQKRVFFTN-KLYLPSQ-TPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPD  255 (900)
Q Consensus       179 ~g-~i~F~CnsWv~~~~~~~~~riff~n-~~yLp~~-tp~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd  255 (900)
                      .| ..+||||+|+...+     .+.++. +|+||.+ +.+.|+++|++||+.+|           +.|+|+.|.+ |.|.
T Consensus       109 ~g~~~~Fpc~rWL~~d~-----~l~l~~g~a~~~~~d~~~~~~~~R~~El~~r~-----------~~y~W~~~~~-G~p~  171 (691)
T 3v98_A          109 HGDYIEFPCYRWITGDV-----EVVLRDGRAKLARDDQIHILKQHRRKELETRQ-----------KQYRWMEWNP-GFPL  171 (691)
T ss_dssp             TSCEEEEEEEEEECSSS-----CEEEECSSCCCGGGCCSHHHHHHHHHHHHHHH-----------HHSCEECSST-TSCC
T ss_pred             CCCEEEEEHHHHCCCCC-----EEEECCCCEEECCCCCCHHHHHHHHHHHHHHH-----------HHCCCCCCCC-CCCC
T ss_conf             99589976478318997-----79971772250145778799999999999988-----------6503788889-9965


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             98866655689988997764578999999999756656898559888667111112013469999985543221103699
Q 002617          256 KKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP  335 (900)
Q Consensus       256 ~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~  335 (900)
                      +       +.+.                     +     ...||+|+||+..|..||..+..+++++.   +++++++..
T Consensus       172 ~-------i~~~---------------------~-----~~~Lp~~~~f~~~k~~~f~~~~~~~~~~~---~l~~~~~~~  215 (691)
T 3v98_A          172 S-------IDAK---------------------C-----HKDLPRDIQFDSEKGVDFVLNYSKAMENL---FINRFMHMF  215 (691)
T ss_dssp             E-------ESCS---------------------S-----GGGSCGGGSCSSSSSSCHHHHHHHHHHHT---TCGGGTTCT
T ss_pred             C-------CCCC---------------------C-----CCCCCCCCCCCHHCCCHHHHHHHHHHHHH---HHCCHHHHC
T ss_conf             1-------1557---------------------6-----00188000311010202566667777763---010035431


Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             99999988889874068779986222200002389898841148742234674133236446536299997774089941
Q 002617          336 DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPY  415 (900)
Q Consensus       336 ~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~  415 (900)
                      ..+|++|+|++++|...            ++   .+++++                   .++|++|+|||||+|||+||+
T Consensus       216 ~~~w~~l~D~~~if~~~------------~~---~~~~~v-------------------~~~W~~D~~F~~Q~LaG~NP~  261 (691)
T 3v98_A          216 QSSWNDFADFEKIFVKI------------SN---TISERV-------------------MNHWQEDLMFGYQFLNGANPV  261 (691)
T ss_dssp             TCCCSSHHHHHHHHTTT------------CC---HHHHHH-------------------HHHTTSHHHHHHHHHHSSCTT
T ss_pred             CCCCCCHHHHHHHHCCC------------CC---CCCHHH-------------------HHHHCCHHHHHHHHHCCCCCC
T ss_conf             47868899999981788------------88---875767-------------------665027699999886489980


Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCC-C--CCC
Q ss_conf             1101346898999997767999986639999975089554999984494889516643472001002689841-1--122
Q 002617          416 SIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT-L--YGS  492 (900)
Q Consensus       416 ~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~-~--yA~  492 (900)
                      +||||+++|++            |+||++|++..|++++||++|+++|||||+|||  +|+++ ++|.+++++ +  |||
T Consensus       262 ~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~~y~~Ap  326 (691)
T 3v98_A          262 LIRRCTELPEK------------LPVTTEMVECSLERQLSLEQEVQQGNIFIVDFE--LLDGI-DANKTDPCTLQFLAAP  326 (691)
T ss_dssp             SCEECSSCCTT------------CCCCHHHHTTTCCSSCCHHHHHHTTCEEEEECG--GGTTC-CCCCSCTTSCCCCCCC
T ss_pred             EEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECH--HHCCC-CCCCCCCCCCCEECCC
T ss_conf             16872568856------------899999998642689869999875999999424--53366-6665688634200275


Q ss_pred             CEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             01886578991446899940799999999741451899998812799999999732223567777552101222479998
Q 002617          493 RTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIA  572 (900)
Q Consensus       493 ~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IA  572 (900)
                      +||||++++|+|+||||||+|+|+++    ++||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+||
T Consensus       327 ~~Lf~l~~~g~L~PlAIqL~~~p~~~----~piftP~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~THlv~E~f~vA  399 (691)
T 3v98_A          327 ICLLYKNLANKIVPIAIQLNQIPGDE----NPIFLPSD---AKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIA  399 (691)
T ss_dssp             EEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             79999868997624899961699898----97573799---952799999999746899999998861136778999999


Q ss_pred             HHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
Q ss_conf             61467865751120342101001232888760347884112356886-45999999997015778866774478856998
Q 002617          573 TNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG-KYSMEFSSVAYDKQWRFDHEALPKDLISRGLA  651 (900)
Q Consensus       573 t~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a  651 (900)
                      |+||||.+|||||||.||||+||+||++||+.|||+||+||+++++| +++++|++++|++ |+|++++||+||++|||+
T Consensus       400 t~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~  478 (691)
T 3v98_A          400 MYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKD-LTYASLCFPEAIKARGME  478 (691)
T ss_dssp             HHHHCCTTSHHHHHHGGGSTTHHHHHHHHHHHTSSTTCTHHHHCTTTTTHHHHHHHHHHTT-CCSGGGSHHHHHHHTTCC
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCC
T ss_conf             7413887674677635777646421189996230899713455136720499999999844-630656683779866896


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCC
Q ss_conf             7899998754335557866211389999999989874430256554535787899999999620688888999999-879
Q 002617          652 VEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP-VLK  730 (900)
Q Consensus       652 ~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P-~l~  730 (900)
                      ++|         .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++. ||| +|+
T Consensus       479 ~~~---------~l~~YpY~dDgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~  548 (691)
T 3v98_A          479 SKE---------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSS-GFPKSVK  548 (691)
T ss_dssp             CTT---------TCTTCHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHTCHHHHHHHHHHHHTTTTTCGGG-CCCSCCC
T ss_pred             CCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCC
T ss_conf             401---------388983477799999999999999998747983674277999999999973446777555-6765678


Q ss_pred             CHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHH
Q ss_conf             95679998723011244332222456630022269964334677899999906888741050889970399968999999
Q 002617          731 TPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVM  810 (900)
Q Consensus       731 T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m  810 (900)
                      |+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ ||..        +++++|++||++.||+.+|
T Consensus       549 T~~~Lv~~lT~iIf~aSaqHAAVNfgQ~~y~g~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~a~~~~  619 (691)
T 3v98_A          549 SREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTA-KGVV--------TIEQIVDTLPDRGRSCWHL  619 (691)
T ss_dssp             SHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCCS-SSCC--------CHHHHHHHSCCHHHHHHHH
T ss_pred             CHHHHHHHHHEEHHHCCCHHHHCCCCCCCEEEECCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHH
T ss_conf             899999887351201240333104575530203588855546899999-8887--------7778987788878889999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf             99996317899975446767989888578999999999999999999865218942113689866782000479999987
Q 002617          811 AILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVT  890 (900)
Q Consensus       811 ~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t  890 (900)
                      +++++||+|++||+|||+|+++ |+.|+++++|+++|+++|++||++|++||+++         ++||+||+|+      
T Consensus       620 ~~~~~LS~~~~de~~LG~y~~~-~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~------  683 (691)
T 3v98_A          620 GAVWALSQFQENELFLGMYPEE-HFIEKPVKEAMARFRKNLEAIVSVIAERNENL---------QLPYYYLDPD------  683 (691)
T ss_dssp             HHHHHHTCCCTTCCBTTCCCSC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------SSCCCTTCGG------
T ss_pred             HHHHHHCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC------
T ss_conf             9999845788887440358841-12787999999999999999999999972899---------9884007988------


Q ss_pred             CCCCCCCCCC
Q ss_conf             6887743249
Q 002617          891 GKGVPYSISI  900 (900)
Q Consensus       891 ~~gIPnSIsI  900 (900)
                        +|||||||
T Consensus       684 --~IpnSIsI  691 (691)
T 3v98_A          684 --RIPNSVAI  691 (691)
T ss_dssp             --GCBSSCCC
T ss_pred             --CCCCEEEC
T ss_conf             --98764159


No 7  
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A
Probab=1.00  E-value=1  Score=1325.48  Aligned_cols=642  Identities=25%  Similarity=0.442  Sum_probs=562.7

Q ss_pred             CCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECC------CCCEEEEEEEEE
Q ss_conf             92899997510179988852001444123588999735899999602899952699998468------985011028993
Q 002617          102 KSLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH------HKEMYLKDIVLD  175 (900)
Q Consensus       102 ~~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgAv~v~n~~------~~e~fl~~i~l~  175 (900)
                      ..|.+.|+.+.-.  +  +...|+.    ..-..+....|.++  + .++|.+-.|.|....      ...|||+.|+|.
T Consensus        25 a~V~I~L~G~~G~--S--~~~~L~~----~~FeRGs~d~F~v~--~-~dLG~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~   93 (696)
T 3fg1_A           25 ATITIRITGAKGR--T--DYLKLDK----GSFEAGSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIII   93 (696)
T ss_dssp             SCEEEEEEETTEE--C--CCEEECS----SCBCTTCEEEEEEE--E-ECCSSEEEEEEEECCCCTTCSCCCEEEEEEEEE
T ss_pred             CEEEEEEEECCCC--E--EEEEECC----CCCCCCCCCEEEEE--E-CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEE
T ss_conf             5448999978986--6--4388178----77578970379999--7-148884588999789677777888476279999


Q ss_pred             CCCCC-CEEEEECCCCCCCCCCCCCEEEEEC-CCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             06997-2899636564458989855189613-311578998-66689999999977259976644568143113446899
Q 002617          176 GLPNG-PVNVTCNSWLHSKHDNKQKRVFFTN-KLYLPSQTP-DGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLG  252 (900)
Q Consensus       176 ~~p~g-~i~F~CnsWv~~~~~~~~~riff~n-~~yLp~~tp-~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG  252 (900)
                      +.-.| ..+|+||+|+...       +.++. +|+||.+.+ +.|+++|++||+++|           +.|+|+.|.+ |
T Consensus        94 ~~~tg~~~~Fpc~rWL~~d-------l~lreG~a~l~~~d~~~~~~~~R~~el~~r~-----------~~y~w~~~~~-G  154 (696)
T 3fg1_A           94 SSTQDRVYSFPCFRWVIKD-------MVLFPGEATLPFNEVPAIVSEQRQKELEQRK-----------LTYQWDYVSD-D  154 (696)
T ss_dssp             ETTCSSCEEEEEEEEESSE-------EEECCSSCCCTTSCCCHHHHHHHHHHHHHHH-----------HHSCEECSST-T
T ss_pred             ECCCCCEEEEEHHHHCCCC-------EEECCCCEECCCCCCCHHHHHHHHHHHHHHH-----------HEECCCCCCC-C
T ss_conf             4899958996744614687-------0754763243555663899999999999746-----------4040788889-9


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99998866655689988997764578999999999756656898559888667111112013469999985543221103
Q 002617          253 DPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF  332 (900)
Q Consensus       253 ~Pd~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~  332 (900)
                      .|.+       +.+.                     +     ...||+|+||+..|..+|..+..+++.+..+   ++++
T Consensus       155 ~p~~-------i~~~---------------------~-----~~~Lp~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~  198 (696)
T 3fg1_A          155 MPGN-------IKAK---------------------T-----HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLF  198 (696)
T ss_dssp             SCCE-------ECCS---------------------S-----GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHH
T ss_pred             CCCE-------ECCC---------------------C-----CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHH
T ss_conf             8640-------0446---------------------5-----0018820121321332156667778876544---4343


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             69999999988889874068779986222200002389898841148742234674133236446536299997774089
Q 002617          333 VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGL  412 (900)
Q Consensus       333 ~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~  412 (900)
                      +. ..+|++|+|++++|....            +.   +.               |.+    ..+|++|+|||||+|||+
T Consensus       199 ~~-~~~w~~l~d~~~~f~~~~------------~~---~~---------------~~v----~~~W~~D~~F~~Q~L~G~  243 (696)
T 3fg1_A          199 TM-FENWDSYDDYHILYRNWI------------LG---GT---------------PNM----ADRWHEDRWFGYQFLNGA  243 (696)
T ss_dssp             TT-TCCCCSGGGGGGGGTTSC------------CS---SS---------------CTT----TTTTTSHHHHHHHHHHSS
T ss_pred             HH-CCCCCCHHHHHHHHCCCC------------CC---CC---------------HHH----HHHCCCHHHHHHHHHCCC
T ss_conf             21-468788999999847888------------88---66---------------667----655058599999886489


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCC--CCC----HHHHC-----
Q ss_conf             9411101346898999997767999986639999975089554999984494889516643--472----00100-----
Q 002617          413 NPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDL--FLP----YVEKV-----  481 (900)
Q Consensus       413 NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~--~lp----~l~~i-----  481 (900)
                      ||++||||+++|++            |+||++|++..|++++||++|+++|||||+|||++  +++    |++++     
T Consensus       244 NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~~~~~~i~~~~~  311 (696)
T 3fg1_A          244 NPVILTRCDALPSN------------FPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVP  311 (696)
T ss_dssp             CTTSCEECSSCCTT------------SCCCHHHHGGGCCSSCCHHHHHHHTCEEEEECGGGTTCBCTTSCBCBTTBCC--
T ss_pred             CCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCC
T ss_conf             98126874657865------------678789998650699869999876999999655543446545320000022344


Q ss_pred             -CCCCCCC--CC--CCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -2689841--11--220188657899144689994079999999974145189999881279999999973222356777
Q 002617          482 -RQLKSTT--LY--GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLV  556 (900)
Q Consensus       482 -n~~~g~~--~y--A~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hqlv  556 (900)
                       |.+++++  +|  ||+||||++++|+|+||||||+|+|++.    ++||||+|+  ++|+|+|||+||++||+++||++
T Consensus       312 ~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p~~~----~piftP~d~--~~~~W~lAK~~v~~~D~~~Hql~  385 (696)
T 3fg1_A          312 DHLKHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPE----NPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLN  385 (696)
T ss_dssp             ------CCCCCBCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTCS--SHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             564577655512116679999868997403899974699898----974788999--85479999999986688998888


Q ss_pred             HHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCC
Q ss_conf             755210122247999861467865751120342101001232888760347884112356886-4599999999701577
Q 002617          557 SHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG-KYSMEFSSVAYDKQWR  635 (900)
Q Consensus       557 sHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~  635 (900)
                      +||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||+||+++++| +++++|++++|++ |+
T Consensus       386 ~Hll~THlv~E~f~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~-~~  464 (696)
T 3fg1_A          386 THLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKE-VN  464 (696)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHHHHHTTHHHHHHHHHHHTTSTTSHHHHHCTTTTTHHHHHHHHHHTT-CC
T ss_pred             HHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CE
T ss_conf             87603156789999998512887674566503676525301579895202888710245046730599999999834-64


Q ss_pred             CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             88667744788569987899998754335557866211389999999989874430256554535787899999999620
Q 002617          636 FDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTV  715 (900)
Q Consensus       636 f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~  715 (900)
                      |++++||+||++|||+.  ++       .|||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++
T Consensus       465 f~~~~lP~dL~~RG~~~--~~-------~lp~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~  535 (696)
T 3fg1_A          465 LQDYHLPNALKKRGVDD--PS-------KLPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKN  535 (696)
T ss_dssp             GGGGCHHHHHHHTTCCC--TT-------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHH
T ss_pred             ECCCCCCCHHHHCCCCC--CC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             05677841366559987--22-------3789815887999999999999998886379972104769999999999726


Q ss_pred             CC---CCCCCCCCCC-CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             68---8888999999-8799567999872301124433222245663002226996433467789999990688874105
Q 002617          716 GH---GDKKHEPWWP-VLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEK  791 (900)
Q Consensus       716 Gh---~d~k~~p~~P-~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~  791 (900)
                      ||   +|.++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ ||..        
T Consensus       536 G~~~~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~-kg~~--------  605 (696)
T 3fg1_A          536 GWRVNPGHQDH-GVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKK-KGEA--------  605 (696)
T ss_dssp             TSCCCTTCCCC-CCCSSCCCHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCBCSCCCSS-SSCC--------
T ss_pred             CCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCHHHHHCCCCCCCCEEECCCCCHHHCCCCCCC-CCCC--------
T ss_conf             77645677654-5765578899999887540301140233104575530203578845436899999-8988--------


Q ss_pred             CHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             08899703999689999999999631789997544676798988857899999999999999999986521894211368
Q 002617          792 PENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRN  871 (900)
Q Consensus       792 pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~  871 (900)
                      +++++|++||++.||+.+|+++++||+|++||+|||+|++++|+ |+++++|+++|+++|++||++|++||+++      
T Consensus       606 ~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~------  678 (696)
T 3fg1_A          606 TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL------  678 (696)
T ss_dssp             CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred             CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC------
T ss_conf             87789876898367589999999854788886330357850337-88999999999999999999999982899------


Q ss_pred             CCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             98667820004799999876887743249
Q 002617          872 GAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       872 g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                         ++||+||+|+        +|||||||
T Consensus       679 ---~~PY~~L~P~--------~IpnSIsI  696 (696)
T 3fg1_A          679 ---EVPYIYLLPE--------RIPNGTAI  696 (696)
T ss_dssp             ---SSCCCTTCGG--------GSBSSCCC
T ss_pred             ---CCCCCCCCCC--------CCCCEEEC
T ss_conf             ---9884017988--------88762059


No 8  
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}
Probab=1.00  E-value=1  Score=1311.52  Aligned_cols=637  Identities=26%  Similarity=0.457  Sum_probs=556.1

Q ss_pred             CEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECC---CCCEEEEEEEEECCCC
Q ss_conf             2899997510179988852001444123588999735899999602899952699998468---9850110289930699
Q 002617          103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN  179 (900)
Q Consensus       103 ~v~lqLvS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgAv~v~n~~---~~e~fl~~i~l~~~p~  179 (900)
                      .|.+.|+.+.- ..+  +...|..+... .-..+....|.++  + .++|.+-.+.|....   ...|||+.|+|.+.-.
T Consensus        39 ~V~I~L~G~~G-~~S--~~~~L~~~~~~-~FeRGs~D~F~v~--~-~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~~~t  111 (698)
T 3vf1_A           39 SVSIKLTGKDG-AET--SAFSLDKYFHN-DFESGGTDTYDQS--G-VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDE  111 (698)
T ss_dssp             CEEEEEEETTS-CBC--CCEEECCBCSS-SSCCCCEEEEEEE--E-CCCSSEEEEEEEECCCSSBCCCEEEEEEEEEECT
T ss_pred             EEEEEEEECCC-CEE--CCEEECCCCCC-CCCCCCEEEEEEE--E-CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCC
T ss_conf             42899997899-701--36681788877-5245872079998--2-2567844799998998799975986999973887


Q ss_pred             ----C-CEEEEECCCCCCCCCCCCCEEEEEC-CCCCCCC-CC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC---CC
Q ss_conf             ----7-2899636564458989855189613-3115789-98-66689999999977259976644568143113---44
Q 002617          180 ----G-PVNVTCNSWLHSKHDNKQKRVFFTN-KLYLPSQ-TP-DGLKRYRAEELTILRGNGQGERKTYDRIYDYD---VY  248 (900)
Q Consensus       180 ----g-~i~F~CnsWv~~~~~~~~~riff~n-~~yLp~~-tp-~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~---~y  248 (900)
                          | ..+||||+|+...       +.++. +|.||.+ +. +.|+++|++||+.+|           +.|+|+   .|
T Consensus       112 ~~~~g~~~~Fpc~rWL~~d-------~~l~~G~a~l~~~d~~~~~~~~~R~~El~~r~-----------~~y~w~~~~~~  173 (698)
T 3vf1_A          112 ATGFSNKYIFPCYRWVIKQ-------LVVYEGKAILPNSKDNVKTIAEQRTKEVSENK-----------KLYKWGTDPRY  173 (698)
T ss_dssp             TTCCEEEEEEEEEEECSSE-------EEEECSSCCCTTSSSCCHHHHHHHHHHHHHHH-----------HHSCBCCCGGG
T ss_pred             CCCCCCEEEEEHHHCCCCC-------CEECCCCEECCCCCCCCHHHHHHHHHHHHHHH-----------HHCCCCCCCCC
T ss_conf             7778957997720304688-------18667740335135566689999999999877-----------62037998865


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHH-HHHHHHHH
Q ss_conf             68999999886665568998899776457899999999975665689855988866711111201346999-99855432
Q 002617          249 NDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYS-VLHALVPS  327 (900)
Q Consensus       249 ndlG~Pd~~~~~~rpvlgg~~~pyPRR~rtgr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~-~~~~~~p~  327 (900)
                      .+ |.|-+       +.+.                     +     ...||+|+||+..|..+| ....++ +.+.   +
T Consensus       174 ~~-G~p~~-------~~~~---------------------~-----~~~Lp~~~~f~~~k~~~~-~~~~~~~~~~~---~  215 (698)
T 3vf1_A          174 VQ-DLPGF-------VDAE---------------------E-----PKSLPKDVQFTDEATSSL-FRVGLADFANL---G  215 (698)
T ss_dssp             SS-SSCCC-------BCCS---------------------S-----GGGSCGGGSCSSGGGGGS-SCCSHHHHHHT---T
T ss_pred             CC-CCCCE-------ECCC---------------------C-----CCCCCHHHCCCCCCCCHH-HHHHHHHHHHH---H
T ss_conf             89-98762-------0567---------------------7-----001883232012233326-55435787764---4


Q ss_pred             HHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             21103699999999888898740687799862222000023898988411487422346741332364465362999977
Q 002617          328 LETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQ  407 (900)
Q Consensus       328 ~~~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ  407 (900)
                      ++++++. ..+|++|+|++++|.....            .   +.++               +    ..+|++|+|||||
T Consensus       216 ~~~~~~~-~~~w~~l~d~~~~f~~~~~------------~---~~~~---------------v----~~~W~~D~~F~~Q  260 (698)
T 3vf1_A          216 LSHLFGI-WDDWDCLEDFRQLITPAIK------------S---GLPH---------------A----AEYWRDDVWFGSQ  260 (698)
T ss_dssp             CGGGTTC-CCCCSSGGGGGGGCCTTST------------T---CSCT---------------H----HHHTTCHHHHHHH
T ss_pred             HHHHHHH-CCCCCCHHHHHHHHCCCCC------------C---CCHH---------------H----HHHCCCHHHHHHH
T ss_conf             2103320-5686789999998457888------------7---6544---------------5----5525587999999


Q ss_pred             HHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCC
Q ss_conf             74089941110134689899999776799998663999997508955499998449488951664347200100268984
Q 002617          408 TLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKST  487 (900)
Q Consensus       408 ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~  487 (900)
                      +|||+||++||||+++|++            |+||++|++..|++++||++|+++|||||+|||+  |+++ ++|.++++
T Consensus       261 ~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~--l~~~-~~~~~~~~  325 (698)
T 3vf1_A          261 FLNGSNPEVIRRCDKLPEN------------FPVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKI--LEGI-PTMDTPED  325 (698)
T ss_dssp             HHHSSCCSSCEECSSCCTT------------CCCCHHHHGGGSCTTCCHHHHHHTTCEEEEECGG--GTTC-CCCEETTE
T ss_pred             HHCCCCCCEEEECCCCCCC------------CCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCC
T ss_conf             8648998427885668865------------5676899986506898799998759989996345--3477-56544887


Q ss_pred             CCC--CCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             111--22018865789914468999407999999997414518-999988127999999997322235677775521012
Q 002617          488 TLY--GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLP-SWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHC  564 (900)
Q Consensus       488 ~~y--A~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP-~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHl  564 (900)
                      ++|  ||+||||++++|+|+||||||+|+|++.    ++|||| +|   ++|+|+|||+||++||+++||+++||++||+
T Consensus       326 ~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p~~~----~~iftP~~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~TH~  398 (698)
T 3vf1_A          326 KRYITTPLGLFYLKNNDDIIPIAIQLYQQPGEN----NSIWTPLKD---TEWDWIMAKLWLRCADTQYHQMITHLLRCHL  398 (698)
T ss_dssp             ECBCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BCEECTTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHH
T ss_pred             CCEECCCEEEEEECCCCCEEEEEEEEECCCCCC----CCEECCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             325116458999878997403899974699888----973647989---8567999999997568888888888741367


Q ss_pred             CHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             2247999861467865751120342101001232888760347884112356886-459999999970157788667744
Q 002617          565 CTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG-KYSMEFSSVAYDKQWRFDHEALPK  643 (900)
Q Consensus       565 v~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~f~~~~lP~  643 (900)
                      ++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||+||+++++| +++++|++++|++ |+|++++||+
T Consensus       399 v~E~~~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~ar~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~  477 (698)
T 3vf1_A          399 MMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRS-VTFDSYDLVK  477 (698)
T ss_dssp             HHHHHHHHHHHHCCTTSHHHHHHHHHHTTHHHHHHHHHHHTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGCHHH
T ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CCCCCCCCHH
T ss_conf             789999998424997674566411566403201489896210888701454036720599999999843-5425677868


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCC
Q ss_conf             78856998789999875433555786621138999999998987443025655453578789999999962068---888
Q 002617          644 DLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGH---GDK  720 (900)
Q Consensus       644 DL~~RG~a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh---~d~  720 (900)
                      ||++|||+.            |||||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||   +|+
T Consensus       478 dL~~RG~~~------------l~~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~  545 (698)
T 3vf1_A          478 DLRQRGVDG------------LRKFYYKDDALLLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDG  545 (698)
T ss_dssp             HHHHTTCTT------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHHHHHTTSCCCTTC
T ss_pred             HHHHCCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             898769976------------78983077699999999999999887538993010365999999999974467655677


Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCC
Q ss_conf             8999999-879956799987230112443322224566300222699643346778999999068887410508899703
Q 002617          721 KHEPWWP-VLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNT  799 (900)
Q Consensus       721 k~~p~~P-~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~t  799 (900)
                      ++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ ||..        +++++|++
T Consensus       546 ~~~-g~P~~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~  615 (698)
T 3vf1_A          546 TDK-KVPKSFENREELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTE-KGKS--------NHKVIMAS  615 (698)
T ss_dssp             CCC-CCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSSGGGSCSCBSSCCCSS-TTCC--------CHHHHHHH
T ss_pred             CCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCCEEECCCCCHHHCCCCCCC-CCCC--------CHHHHHHH
T ss_conf             654-5765578899999887540301140233104575530203578845436899999-8988--------87789776


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             99968999999999963178999754467679898885789999999999999999998652189421136898667820
Q 002617          800 FPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYE  879 (900)
Q Consensus       800 lP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~  879 (900)
                      ||++.||+.+|+++++||+|++||+|||+|++++|+ |+++++|+++|+++|++||++|++||+++         ++||+
T Consensus       616 LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~  685 (698)
T 3vf1_A          616 LANKHQAVTMVSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERNQGM---------VSPYT  685 (698)
T ss_dssp             SCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHTTTC---------SSCCC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCC
T ss_conf             878899999999999854788887430357840237-88999999999999999999999972899---------98840


Q ss_pred             EECCCCCCCCCCCCCCCCCCC
Q ss_conf             004799999876887743249
Q 002617          880 LLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       880 ~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      ||+|+        +|||||||
T Consensus       686 ~L~P~--------~IpnSIsI  698 (698)
T 3vf1_A          686 WLIPG--------HVPNSIAI  698 (698)
T ss_dssp             TTCGG--------GSBSSCCC
T ss_pred             CCCCC--------CCCCEEEC
T ss_conf             27988--------89773059


No 9  
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa}
Probab=1.00  E-value=1  Score=1261.84  Aligned_cols=553  Identities=30%  Similarity=0.439  Sum_probs=503.0

Q ss_pred             CEEEEEC-CCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             5189613-31157899-866689999999977259976644568143113446899999988666556899889977645
Q 002617          199 KRVFFTN-KLYLPSQT-PDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRC  276 (900)
Q Consensus       199 ~riff~n-~~yLp~~t-p~~L~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlG~Pd~~~~~~rpvlgg~~~pyPRR~  276 (900)
                      .-+.+++ +|+|+.+. .+.|+++|++||+++|           +.|+|+.|.+ |.|-+       +.+.         
T Consensus        15 ~~~~l~~g~a~~~~~d~~~~~~~~R~~El~~r~-----------~~y~w~~~~~-G~p~~-------i~~~---------   66 (573)
T 3rde_A           15 VPRGSHMGTARTVVDDPQGLFKKHREEELAERR-----------KLYRWGNWKD-GLILN-------IAST---------   66 (573)
T ss_dssp             -------CCCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST-TSCCE-------ECCS---------
T ss_pred             EEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH-----------HEECCCCCCC-CCCCC-------CCCC---------
T ss_conf             499966862574066777899999999999855-----------1242899899-99740-------0678---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             78999999999756656898559888667111112013469999985543221103699999999888898740687799
Q 002617          277 RTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP  356 (900)
Q Consensus       277 rtgr~~~~~dp~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~~f~di~~ly~~~~~~~  356 (900)
                                  +     ..+||+||||++.|..+|..+..+++++..+   +++++. ..+|++|+||+++|..+.   
T Consensus        67 ------------~-----~~~LP~d~~f~~~K~~~f~~~~~~~~~~~~l---~~~~~~-~~~w~sl~D~~~lf~~~~---  122 (573)
T 3rde_A           67 ------------G-----IHDLPVDERFLEDKRIDFEASLAKGLADLAV---KDSLNV-LMSWNSLDSFNRIFWSGQ---  122 (573)
T ss_dssp             ------------S-----GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHHT-TSCCCSGGGGGGGCCSCC---
T ss_pred             ------------C-----CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCCC---
T ss_conf             ------------7-----0008831201542332177777888887423---456651-479898999999845799---


Q ss_pred             CCCCCCCHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCC
Q ss_conf             86222200002389898841148742234674133236446536299997774089941110134689899999776799
Q 002617          357 PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGP  436 (900)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~  436 (900)
                               +   .+++++                   .++|++|++||||+|||+||++||||+++|++          
T Consensus       123 ---------~---~~~e~v-------------------~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~P~~----------  161 (573)
T 3rde_A          123 ---------S---KLAERV-------------------RDSWKEDALFGYQFLNGTNPMLLRHSVELPAR----------  161 (573)
T ss_dssp             ---------C---HHHHHH-------------------HHHTTCHHHHHHHHHHSSCTTSCEECSSCCTT----------
T ss_pred             ---------C---CCCCCH-------------------HHHCCCHHHHHHHHHCCCCCHHEEECCCCCCC----------
T ss_conf             ---------8---865012-------------------33232749999998648997223666768744----------


Q ss_pred             CCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCC--CCCEEEEECCCCCEEEEEEEEECC
Q ss_conf             998663999997508955499998449488951664347200100268984111--220188657899144689994079
Q 002617          437 PESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLY--GSRTIFFLTPAGTLRPIAIELTRP  514 (900)
Q Consensus       437 ~~s~It~e~i~~~l~g~~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~g~~~y--A~~~Lffl~~dG~L~PIAIqL~~~  514 (900)
                        |+||++|++.   | +||++|+++|||||+|||  +|+++ ++|.++++++|  ||+||||++++|+|+||||||++|
T Consensus       162 --~~vt~~~v~~---g-~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~~p  232 (573)
T 3rde_A          162 --LKFPPGMEEL---Q-AQLEKELQGGTLFEADFS--LLDGI-KANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQLP  232 (573)
T ss_dssp             --CCCCTTCHHH---H-HHHHHHHHHTCEEEEECG--GGTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEEEECSCC
T ss_pred             --CCCCHHHHHC---C-CCHHHHHHCCCEEEEEHH--HHCCC-CCCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECC
T ss_conf             --5685999861---6-609999972998998425--53446-5565688731521556899987899762589997458


Q ss_pred             CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
Q ss_conf             99999997414518999988127999999997322235677775521012224799986146786575112034210100
Q 002617          515 PMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYT  594 (900)
Q Consensus       515 ~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~T  594 (900)
                      +.++  ..++||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+|
T Consensus       233 ~~~~--~~~~iftP~d---~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~E~f~iAt~R~Ls~~HPI~kLL~PH~r~T  307 (573)
T 3rde_A          233 REGS--PLPPLFLPTD---PPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYT  307 (573)
T ss_dssp             CTTS--CCCCEECTTS---CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCTTSHHHHHHGGGGTTH
T ss_pred             CCCC--CCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH
T ss_conf             9988--8898477899---9517999999986118999999998732578889999998423998675255320566505


Q ss_pred             CCCHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             1232888760347884112356886-459999999970157788667744788569987899998754335557866211
Q 002617          595 MEINGLARQALVNADGIIESSFSPG-KYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFAND  673 (900)
Q Consensus       595 l~IN~lAR~~LI~~gGiie~~f~~G-~~~~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrdD  673 (900)
                      |+||++||+.|||+||++|+++++| +++++|++++|++ |+|++++||+||++|||+.            |||||||+|
T Consensus       308 l~IN~~AR~~Li~~gGiid~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~~------------lp~YpY~dD  374 (573)
T 3rde_A          308 MEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAAL-LTYSSFCPPDDLADRGLLG------------VESSFYAQD  374 (573)
T ss_dssp             HHHHHHCCCCCSSTTSHHHHHCTTTTTHHHHHHHHHHHH-CCSGGGSHHHHHHHTTCTT------------CTTCHHHHH
T ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHC-CCCCCCCCCHHHHHCCCCC------------CCCCCHHHH
T ss_conf             442399997342898712455326702399999998702-5115246708788669876------------889825776


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHHHHHHHEEECCCCCCCC
Q ss_conf             389999999989874430256554535787899999999620688888999999-8799567999872301124433222
Q 002617          674 GLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWP-VLKTPKDLIEIITTIVWVTSGHHAA  752 (900)
Q Consensus       674 GL~IW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~k~~p~~P-~l~T~~eLv~~lT~iIf~aSaqHAA  752 (900)
                      ||+||+||++||++||++||++|++|++|.|||+||+||+++||+|+++. ||| +|+|+++||++||+|||+||+||||
T Consensus       375 gL~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaqHAA  453 (573)
T 3rde_A          375 ALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR-GFPVSLQSKEQLCHFVTMCIFTCTGQHSS  453 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHCCCCCCTTSCGGG-TCCSCCCSHHHHHHHHHHHHHCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCHHHHH
T ss_conf             99999999999999999857990341387889999999973446777555-67766788999998885215221303443


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             24566300222699643346778999999068887410508899703999689999999999631789997544676798
Q 002617          753 VNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEP  832 (900)
Q Consensus       753 VNfgQy~y~gf~PN~P~~~r~p~P~~~kg~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~  832 (900)
                      ||||||+|+||+||+|++||+|||++ | .        .+++++|++||++.||+.+|+++|+||+|++||+|||+|++ 
T Consensus       454 VNfgQ~~y~g~vPN~P~~~r~p~P~~-k-~--------~~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~-  522 (573)
T 3rde_A          454 NHLGQLDWYTWVPNAPCTMRLPPPTT-K-D--------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALGQHEE-  522 (573)
T ss_dssp             HHTTHHHHSSSGGGSCSCCSSCCCSS-S-C--------CCHHHHHHHSCCHHHHHHHHHHHHHHHSCCTTCCBTTCCCC-
T ss_pred             HCCCCCCEEEECCCCHHHHCCCCCCC-C-C--------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-
T ss_conf             13475530405678727646999999-9-9--------87999998788868899999999995478888752035873-


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             98885789999999999999999998652189421136898667820004799999876887743249
Q 002617          833 AWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       833 ~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~knr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      .|+.|+++++|+++|+++|++||++|++||+++         ++||+||+|+        +|||||||
T Consensus       523 ~~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  573 (573)
T 3rde_A          523 EYFSGPGPKAVLTKFREELAALDKDIEVRNAKL---------ALPYEYLRPS--------RVENSVAI  573 (573)
T ss_dssp             CCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT--------TSBSSCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCCCCC
T ss_conf             202788999999999999999999999981899---------9885007988--------98770249


No 10 
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}
Probab=1.00  E-value=1  Score=1158.02  Aligned_cols=494  Identities=30%  Similarity=0.452  Sum_probs=450.5

Q ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCC
Q ss_conf             71111120134699999855432211036999999998888987406877998622220000238989884114874223
Q 002617          305 SEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILL  384 (900)
Q Consensus       305 ~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~~f~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  384 (900)
                      +..|..+|..+..+++....+   +++++. .++|++|+|++++|....            +.   +.+++         
T Consensus        13 ~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~D~~~~f~~~~------------~~---~~~~v---------   64 (541)
T 3d3l_A           13 LGTENLDFEWTLKAGALEMAL---KRVYTL-LSSWNCLEDFDQIFWGQK------------SA---LAEKV---------   64 (541)
T ss_dssp             ---------CCSSTTHHHHHH---HHHHHH-HHTTSSSTTHHHHHTSCC------------CH---HHHHH---------
T ss_pred             CCCCCCEEEECHHHHHHHHHH---HHHHHC-CCCCCCHHHHHHHHCCCC------------CC---CCHHH---------
T ss_conf             555640234004677788789---988641-588666999999843677------------77---74345---------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCC
Q ss_conf             46741332364465362999977740899411101346898999997767999986639999975089554999984494
Q 002617          385 FETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKK  464 (900)
Q Consensus       385 fp~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~It~e~i~~~l~g~~tl~~al~~gr  464 (900)
                                .++|++|++||||+|||+||++|+||+++|++            ++||++|++   ++ +||++|+++||
T Consensus        65 ----------~~~W~~De~Fa~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~---~~-~tl~~al~~gr  118 (541)
T 3d3l_A           65 ----------RQCWQDDELFSYQFLNGANPMLLRRSTSLPSR------------LVLPSGMEE---LR-AQLEKELQNGS  118 (541)
T ss_dssp             ----------HHHTTSHHHHHHHHHHSSCCSSCEECSSCCTT------------CCCCSSCHH---HH-HHHHHHHHTTC
T ss_pred             ----------HHHHCCCHHHHHHHHCCCCCCCCEECCCCCCC------------CCCCHHHHC---CC-CCHHHHHHCCC
T ss_conf             ----------54311719999998648997412346778622------------579988966---86-66999976499


Q ss_pred             EEEECCCCCCCCHHHHCCCCCCCCCC--CCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf             88951664347200100268984111--2201886578991446899940799999999741451899998812799999
Q 002617          465 LFILDYHDLFLPYVEKVRQLKSTTLY--GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAK  542 (900)
Q Consensus       465 LFi~Dy~d~~lp~l~~in~~~g~~~y--A~~~Lffl~~dG~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK  542 (900)
                      |||+|||+  |+++ ++|.++++++|  ||+||||++++|+|+||||||+.| +++++ +++||||+|   ++|.|+|||
T Consensus       119 Lfi~Dy~~--l~~~-~~n~~~~~~~Y~~Ap~~lf~l~~~g~L~PlAIqL~~p-~~~~p-~~~VftP~D---~~~~W~lAK  190 (541)
T 3d3l_A          119 LFEADFIL--LDGI-PANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPP-NPSSP-TPTLFLPSD---PPLAWLLAK  190 (541)
T ss_dssp             EEEEECGG--GTTC-CC-----CCCCCCCCEEEEEECTTSCEEEEEEESSCC-BTTBS-SCCCBCTTS---CHHHHHHHH
T ss_pred             EEEECCHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECC-CCCCC-CCEEECCCC---CCHHHHHHH
T ss_conf             78835255--4668-6665587754122556999998999886799996079-99898-750784899---940899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf             99973222356777755210122247999861467865751120342101001232888760347884112356886459
Q 002617          543 AHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYS  622 (900)
Q Consensus       543 ~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~  622 (900)
                      +||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|++|++|.++
T Consensus       191 ~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~~Giid~~~~~g~~~  270 (541)
T 3d3l_A          191 SWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGG  270 (541)
T ss_dssp             HHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHGGGCCC---------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCC
T ss_conf             99998888999999877566788889999864248865840455478998799888999975218887122320588422


Q ss_pred             -HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             -9999999701577886677447885699878999987543355578662113899999999898744302565545357
Q 002617          623 -MEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVES  701 (900)
Q Consensus       623 -~elss~~Y~~~w~f~~~~lP~DL~~RG~a~~D~~~~~gl~l~l~dYpYrdDGL~IW~AI~~~V~~yv~~YY~~D~~V~~  701 (900)
                       ++|++++|++ |+|++++||+||++|||.            .|||||||+|||+||+||++||++||++||++|++|++
T Consensus       271 ~~el~~~~y~~-~~f~~~~lP~dL~~RG~e------------~ip~YpY~dDgL~iW~aI~~~V~~yv~~yY~~D~~V~~  337 (541)
T 3d3l_A          271 HVQLLRRAAAQ-LTYCSLCPPDDLADRGLL------------GLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKG  337 (541)
T ss_dssp             SHHHHHHHHHT-CCTTTTCHHHHHHHTTCS------------SCTTCHHHHHHHHHHHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred             HHHHHHHHHCC-CCCCCCCCCHHHHHCCCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             89999999727-621424575666645755------------46688520008999999999999999873688432236


Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             87899999999620688888999999879956799987230112443322224566300222699643346778999999
Q 002617          702 DEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPS  781 (900)
Q Consensus       702 D~ELQaW~~Ei~~~Gh~d~k~~p~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~~kg  781 (900)
                      |.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ ||
T Consensus       338 D~ELQaW~~Ei~~~G~~~~~~~g~p~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQy~y~g~vPN~P~~~r~p~P~~-kg  416 (541)
T 3d3l_A          338 DPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTT-KE  416 (541)
T ss_dssp             CHHHHHHHHHHHTTTTTSGGGTTCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCSS-SS
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC-CC
T ss_conf             78999999999845677875679997667599999997756764002445332586631022667756656999977-78


Q ss_pred             CHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             06888741050889970399968999999999963178999754467679898885789999999999999999998652
Q 002617          782 DEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAR  861 (900)
Q Consensus       782 ~~e~~~l~~~pe~~~L~tlP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~R  861 (900)
                      +.+        ++++|++||++.||+.+|+++++||+|++||+|||+|++ .|+.|+++++|+++|+++|++||++|++|
T Consensus       417 ~~~--------~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~R  487 (541)
T 3d3l_A          417 DVT--------MATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITAR  487 (541)
T ss_dssp             SCC--------HHHHHHHSCCHHHHHHHHHHHHHHC----CCCBTTCCCC-CSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--------HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             837--------999998787889999999999996368888761256774-11268489999999999999999999997


Q ss_pred             CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             189421136898667820004799999876887743249
Q 002617          862 NADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  900 (900)
Q Consensus       862 N~~~~~knr~g~~~~PY~~L~Pss~~g~t~~gIPnSIsI  900 (900)
                      |+++         .+||+||+|+        +|||||||
T Consensus       488 N~~~---------~~PY~~L~P~--------~IpnSIsI  509 (541)
T 3d3l_A          488 NEQL---------DWPYEYLKPS--------CIENSVTS  509 (541)
T ss_dssp             HHTC---------SSCCCSCCGG--------GSBSSCC-
T ss_pred             CCCC---------CCCCCEECCC--------CCCCEEEE
T ss_conf             0899---------9997117988--------97757878


Done!