Query 002619
Match_columns 900
No_of_seqs 506 out of 3462
Neff 5.3
Searched_HMMs 29240
Date Tue Mar 26 16:35:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002619.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1337-1341//hhsearch_pdb/002619hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v5w_A G-protein coupled recep 1.0 1 1 549.5 21.4 406 386-848 98-524 (689)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 516.9 25.2 280 491-798 28-310 (311)
3 3ubd_A Ribosomal protein S6 ki 1.0 1 1 504.6 19.9 277 492-799 21-304 (304)
4 3pfq_A PKC-B, PKC-beta, protei 1.0 1 1 497.4 27.8 331 489-876 335-670 (674)
5 4dc2_A Protein kinase C IOTA t 1.0 1 1 485.3 28.8 329 491-875 48-391 (396)
6 4aw2_A Serine/threonine-protei 1.0 1 1 482.8 25.3 335 491-879 70-414 (437)
7 3c4z_A Rhodopsin kinase; Ser/T 1.0 1 1 480.9 15.7 335 491-858 181-532 (543)
8 2vd5_A DMPK protein; serine/th 1.0 1 1 479.3 26.0 337 491-874 57-403 (412)
9 3txo_A PKC-L, NPKC-ETA, protei 1.0 1 1 478.3 28.2 328 489-872 17-350 (353)
10 4b9d_A Serine/threonine-protei 1.0 1 1 477.6 22.4 259 493-784 22-282 (350)
No 1
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=549.51 Aligned_cols=406 Identities=33% Similarity=0.520 Sum_probs=298.7
Q ss_pred CHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHH----HHH-HCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 768999987510652101073779973110378----861-013421121303578999975768888632026898741
Q 002619 386 MIELADIARCVADTDFSKEGSEFLLACMHDLQD----VLQ-HSKLKALVIDTFGSRIEKLLREKYILACELLDEKSPTSF 460 (900)
Q Consensus 386 ~~~~~~~~~~~~~~~l~k~~~~~l~~~~~~l~~----~~~-~~~~~~~~id~fg~ri~kl~r~~~~l~~~lL~~ksp~~~ 460 (900)
-......++.|++.+++++ ...+.+.+.. .+. ......+..+.|......... + +. ...|
T Consensus 98 ~~~r~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~--~------l~---~~~f 162 (689)
T 3v5w_A 98 EEERVARSREIFDSYIMKE----LLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQ--N------LR---GDVF 162 (689)
T ss_dssp HHHHHHHHHHHHTSHHHHH----HHSSSSCCCHHHHHHHHHHHHTTCCCTTTTHHHHHHHHH--H------HT---THHH
T ss_pred HHHHHHHHHHHHHHHCCHH----HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--H------HC---CCCC
T ss_conf 0467899999999751602----342157564678999997665506986889999999998--7------53---5863
Q ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 00022310021001367898878778865554589907997760269659999999789968999995323213635799
Q 002619 461 SKYKENSRLILDSVSQSSGVSTPLHSSHKERTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIE 540 (900)
Q Consensus 461 s~~~~~srlllds~~~~~~~~~p~~s~~~~~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e 540 (900)
.++...... ....+.... .....+++++|+++++||+|+||+||+|+++.+|+.||||++++..........
T Consensus 163 ~~~~~s~~~--~r~~q~k~~------e~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~ 234 (689)
T 3v5w_A 163 QKFIESDKF--TRFCQWKNV------ELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET 234 (689)
T ss_dssp HHHHHSHHH--HHHHHHHHH------HTTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH
T ss_pred CCCCCCHHH--HHHHHCCCC------CCCCCCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHH
T ss_conf 022467067--788735432------037999568928888983164839999999999989999997578825255689
Q ss_pred HHHHHHHHH---HHCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 999999999---93599955789223114770499996517988577888507899899999999999999998845906
Q 002619 541 RILAERNIL---ITVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIV 617 (900)
Q Consensus 541 ~il~Ei~IL---~~L~HPnIVkL~~~f~~~~~LyLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GII 617 (900)
.+.+|+.++ ..++|||||+++++|++.+.+|+||||++||+|+++|.+.+.+++..+++|++||+.||.|||++|||
T Consensus 235 ~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIi 314 (689)
T 3v5w_A 235 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314 (689)
T ss_dssp HHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999964899987179999998998899994689982999998669999999999999999999999978854
Q ss_pred ECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC-
Q ss_conf 2137999389657991999705775233335655699998889899999997422356677666557999887344317-
Q 002619 618 HRDLKPDNLLIAHDGHIKLTDFGLSKIGLINNTIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLG- 696 (900)
Q Consensus 618 HRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g- 696 (900)
||||||+||||+.+|++||+|||+|+... .....+.||||.|||||++.+
T Consensus 315 HRDLKPeNILld~~G~vKL~DFGlA~~~~-----------------------------~~~~~t~~GTp~YmAPEvl~~~ 365 (689)
T 3v5w_A 315 YRDLKPANILLDEHGHVRISDLGLACDFS-----------------------------KKKPHASVGTHGYMAPEVLQKG 365 (689)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECS-----------------------------SCCCCSCCSCGGGCCHHHHSTT
T ss_pred CCCCCHHHEEEECCCCEEECCCCEEEECC-----------------------------CCCCCCCCCCCCCCCHHHHHCC
T ss_conf 16886687598089988964565566637-----------------------------8987776578673188998479
Q ss_pred CCCCCCCEEECHHHHHHHHHHCCCCCCCC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH--H
Q ss_conf 99984210300258999999399999999---857999864118988999999999889999977535995888992--1
Q 002619 697 TEHGYAADWWSVGIILFEFITGIPPFTAE---SPEIIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGA--N 771 (900)
Q Consensus 697 ~~ys~ksDIWSLGVILyELLtGk~PF~~~---s~~ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa--~ 771 (900)
.+|+.++|||||||++|||++|++||.+. +..+++..+......+| ..+|+++++||.+||++||.+|++. .
T Consensus 366 ~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p---~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ 442 (689)
T 3v5w_A 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGR 442 (689)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCGGGCTTCSSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 9999599999999999999868799999986779999985057988887---6699999999999760898687999888
Q ss_pred CHHHHHCCCCCCCCCCCHHHHC--CCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 2999981999889993011001--6975588999998-----62100001158999999999987689888799987201
Q 002619 772 GAAEVKAHPFFKGVNWDSLALQ--KAVFVPQPESVDD-----TSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTE 844 (900)
Q Consensus 772 ~a~EIL~HPFFk~idw~~L~~~--~ppf~P~~~s~~D-----~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~ 844 (900)
++.+|++||||+++||+.+..+ .|||+|.+....+ +++|+..++.. ..+...+...+.+++. ..+..|+.+
T Consensus 443 ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD~~~fd~e~~~~-~~~~~~d~~~f~~Fs~-~~~~~~q~e 520 (689)
T 3v5w_A 443 GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKG-IKLLDSDQELYRNFPL-TISERWQQE 520 (689)
T ss_dssp THHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC---------CC-CCCCHHHHTTTTTCCE-ECHHHHHHH
T ss_pred CHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHCCCC-CCCCCHHHH
T ss_conf 99999669150478988997089995936999998868777776588554678-9989527788707876-575201123
Q ss_pred HHHC
Q ss_conf 2102
Q 002619 845 MDEC 848 (900)
Q Consensus 845 ~~e~ 848 (900)
|.++
T Consensus 521 ~~et 524 (689)
T 3v5w_A 521 VAET 524 (689)
T ss_dssp HHTT
T ss_pred HHHH
T ss_conf 3555
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=516.85 Aligned_cols=280 Identities=36% Similarity=0.722 Sum_probs=255.2
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
Q ss_conf 54589907997760269659999999789968999995323213635799999999999935999557892231147704
Q 002619 491 RTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNL 570 (900)
Q Consensus 491 ~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~~L 570 (900)
+...++|++++.||+|+||+||+|+++.+|+.||+|++.+.........+.+.+|+++|+.++|||||+++++|++.+.+
T Consensus 28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 107 (311)
T 4aw0_A 28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107 (311)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 88852368988983164849999999999989999998888877978999999999999867998989199999738989
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99996517988577888507899899999999999999998845906213799938965799199970577523333565
Q 002619 571 YLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLINNT 650 (900)
Q Consensus 571 yLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~s 650 (900)
|+||||++||+|.+++.+.+.+++..+++|++||+.||.|||++||+||||||+|||++.+|++||+|||+|+.....
T Consensus 108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~-- 185 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-- 185 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCC--
T ss_conf 999964899899999987499999999999999999999999887826878789969858988899876875025778--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 56999988898999999974223566776665579998873443179998421030025899999939999999985799
Q 002619 651 IDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAESPEII 730 (900)
Q Consensus 651 ~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~s~~ei 730 (900)
.......+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..++
T Consensus 186 -----------------------~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 242 (311)
T 4aw0_A 186 -----------------------SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242 (311)
T ss_dssp -----------------------TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -----------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf -----------------------776543675568030799897689999689899899999999749899899799999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHC---HHHHHCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 986411898899999999988999997753599588899212---99998199988999301100169755
Q 002619 731 FDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGANG---AAEVKAHPFFKGVNWDSLALQKAVFV 798 (900)
Q Consensus 731 ~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa~~---a~EIL~HPFFk~idw~~L~~~~ppf~ 798 (900)
+.+|.+..+.+| ..+|+++++||.+||++||.+|+++.+ ...|++||||++++|+.+..+.||.+
T Consensus 243 ~~~i~~~~~~~p---~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 243 FAKIIKLEYDFP---EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHHTCCCCC---TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHHCCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999971999999---65699999999997628975780967975877987798758989899407999899
No 3
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=504.62 Aligned_cols=277 Identities=42% Similarity=0.785 Sum_probs=249.6
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
Q ss_conf 45899079977602696599999997---899689999953232136357999999999999359995578922311477
Q 002619 492 TSIDDFEIIKPISRGAFGRVFLARKR---TTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRD 568 (900)
Q Consensus 492 ~~~~dyeilk~LGkGsFG~Vyla~~k---~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~ 568 (900)
...++|++++.||+|+||+||+|++. .+++.||+|++++..... .....+.+|+.+|..++|||||+++++|.+.+
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCH-HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
T ss_conf 89556589889721888399999985588789799999981577684-78999999999998779979990999999899
Q ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 04999965179885778885078998999999999999999988459062137999389657991999705775233335
Q 002619 569 NLYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLIN 648 (900)
Q Consensus 569 ~LyLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~ 648 (900)
.+|+|||||+||+|.+++.+.+.+++..++.|++|++.||.|||++||+||||||+|||++.+|++||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~-- 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI-- 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECC--
T ss_conf 999999757998889999755999999999999999999999997799588887899578689988762366343326--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 65569999888989999999742235667766655799988734431799984210300258999999399999999857
Q 002619 649 NTIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAESPE 728 (900)
Q Consensus 649 ~s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~s~~ 728 (900)
.......+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..
T Consensus 178 -------------------------~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~ 232 (304)
T 3ubd_A 178 -------------------------DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232 (304)
T ss_dssp ----------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred -------------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
T ss_conf -------------------------8876304544181507999965688787776361199999998598998984999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH--HCHHHHHCCCCCCCCCCCHHHHC--CCCCCC
Q ss_conf 999864118988999999999889999977535995888992--12999981999889993011001--697558
Q 002619 729 IIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGA--NGAAEVKAHPFFKGVNWDSLALQ--KAVFVP 799 (900)
Q Consensus 729 ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa--~~a~EIL~HPFFk~idw~~L~~~--~ppf~P 799 (900)
+++.+|.+....+| ..+|+++++||.+||++||.+||++ ..+.++++||||+++||+.+..+ .|||+|
T Consensus 233 ~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 233 ETMTMILKAKLGMP---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp HHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred HHHHHHHCCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 99999971899998---7689999999999864698787999867899997690403789999984899949679
No 4
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=1.00 E-value=1 Score=497.40 Aligned_cols=331 Identities=33% Similarity=0.670 Sum_probs=289.4
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEECCC
Q ss_conf 5554589907997760269659999999789968999995323213635799999999999935-999557892231147
Q 002619 489 KERTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITV-RNPFVVRFFYSFTCR 567 (900)
Q Consensus 489 ~~~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L-~HPnIVkL~~~f~~~ 567 (900)
...+.+++|++++.||+|+||.||+|+++.+++.||+|++++.........+.+..|..++..+ .||+|++++++|++.
T Consensus 335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~ 414 (674)
T 3pfq_A 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM 414 (674)
T ss_dssp -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
T ss_conf 56543102279989805998899999999999389999986011245778999999999998556998488888899858
Q ss_pred CEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 70499996517988577888507899899999999999999998845906213799938965799199970577523333
Q 002619 568 DNLYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLI 647 (900)
Q Consensus 568 ~~LyLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~ 647 (900)
+.+|+||||++||+|.+++.+.+.+++..+++|++||+.||.|||++||+||||||+||||+.+|++||+|||+|+...
T Consensus 415 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~- 493 (674)
T 3pfq_A 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI- 493 (674)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC-
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEECCC-
T ss_conf 8789999376798499999753898889999999999999999986790754487655898378968996654011145-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCH
Q ss_conf 56556999988898999999974223566776665579998873443179998421030025899999939999999985
Q 002619 648 NNTIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAESP 727 (900)
Q Consensus 648 ~~s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~s~ 727 (900)
.........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+.
T Consensus 494 --------------------------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~ 547 (674)
T 3pfq_A 494 --------------------------WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547 (674)
T ss_dssp --------------------------CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred --------------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCH
T ss_conf --------------------------688642345688763597663678999501680618999999709999899898
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH--HCHHHHHCCCCCCCCCCCHHHHC--CCCCCCCCCC
Q ss_conf 7999864118988999999999889999977535995888992--12999981999889993011001--6975588999
Q 002619 728 EIIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGA--NGAAEVKAHPFFKGVNWDSLALQ--KAVFVPQPES 803 (900)
Q Consensus 728 ~ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa--~~a~EIL~HPFFk~idw~~L~~~--~ppf~P~~~s 803 (900)
.+++..|......+| ..++.++++||++||++||.+|+++ .++.+|++||||++++|+.+..+ .|||+|.+..
T Consensus 548 ~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~ 624 (674)
T 3pfq_A 548 DELFQSIMEHNVAYP---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG 624 (674)
T ss_dssp HHHHHHHHSSCCCCC---TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG
T ss_pred HHHHHHHHHCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC
T ss_conf 999999984877888---54799999999997447987878998775999862842138899999838899898784789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHC
Q ss_conf 9986210000115899999999998768988879998720121028864359999986435612656301111
Q 002619 804 VDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCPLDLSLINFSFKNLSQLAS 876 (900)
Q Consensus 804 ~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~~~~~F~g~t~k~~~~~~~ 876 (900)
.|++||+.+|+..++.+.+.+... + ....+..|.||||.+.+.+..
T Consensus 625 -~~~~~f~~~~~~~~~~~~~~~~~~----------------~----------~~~~~~~f~~f~~~~~~~~~~ 670 (674)
T 3pfq_A 625 -RNAENFDRFFTRHPPVLTPPDQEV----------------I----------RNIDQSEFEGFSFVNSEFLKP 670 (674)
T ss_dssp -GGHHHHTTTTTSSCSSCCCCCHHH----------------H----------TTCCGGGGTTCCEECSSCCCC
T ss_pred -CCHHHCCCHHCCCCCCCCCCCHHH----------------H----------HCCCCCCCCCCCCCCHHHHCH
T ss_conf -852346801204887668775011----------------2----------034545258985528256231
No 5
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=1.00 E-value=1 Score=485.25 Aligned_cols=329 Identities=35% Similarity=0.687 Sum_probs=285.4
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEECCCCE
Q ss_conf 54589907997760269659999999789968999995323213635799999999999935-99955789223114770
Q 002619 491 RTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITV-RNPFVVRFFYSFTCRDN 569 (900)
Q Consensus 491 ~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L-~HPnIVkL~~~f~~~~~ 569 (900)
.+.+++|+++++||+|+||+||+|+++.+++.||+|++++...........+.+|+.++..+ +||||++++++|++...
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCCHHHCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
T ss_conf 78755717988995379869999999899979999999756616788999999999999964799975716899997999
Q ss_pred EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf 49999651798857788850789989999999999999999884590621379993896579919997057752333356
Q 002619 570 LYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLINN 649 (900)
Q Consensus 570 LyLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~ 649 (900)
+|+||||++||+|..++.+.+.+++..+++|++||+.||.|||++||+||||||+|||++.+|++||+|||+|+...
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~--- 204 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--- 204 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC---
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEEECC---
T ss_conf 99999738999289999874999999999999999999999997897755678898898889998981223034225---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC----
Q ss_conf 5569999888989999999742235667766655799988734431799984210300258999999399999999----
Q 002619 650 TIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAE---- 725 (900)
Q Consensus 650 s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~---- 725 (900)
.........+||+.|+|||++.+..|+.++|||||||++|||++|++||...
T Consensus 205 ------------------------~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~ 260 (396)
T 4dc2_A 205 ------------------------RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260 (396)
T ss_dssp ------------------------CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--
T ss_pred ------------------------CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf ------------------------67774344457744478245417889817877878999999984989876666655
Q ss_pred -----CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH---HCHHHHHCCCCCCCCCCCHHHHC--CC
Q ss_conf -----857999864118988999999999889999977535995888992---12999981999889993011001--69
Q 002619 726 -----SPEIIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGA---NGAAEVKAHPFFKGVNWDSLALQ--KA 795 (900)
Q Consensus 726 -----s~~ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa---~~a~EIL~HPFFk~idw~~L~~~--~p 795 (900)
....++..+......+| ..++.++++||++||++||.+||++ .++.++++||||++++|+.+..+ .|
T Consensus 261 ~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~p 337 (396)
T 4dc2_A 261 NPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVP 337 (396)
T ss_dssp ----CCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCC---CCCCHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf 5201068999999861666788---7689999999998753898685899877899999649464688999997088999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHH
Q ss_conf 75588999998621000011589999999999876898887999872012102886435999998643561265630111
Q 002619 796 VFVPQPESVDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCPLDLSLINFSFKNLSQLA 875 (900)
Q Consensus 796 pf~P~~~s~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~~~~~F~g~t~k~~~~~~ 875 (900)
||+|.+.+..|+++|++.|+..+..+.+.+.... . ...+..|.||||.+...+.
T Consensus 338 p~~p~~~~~~d~~~fd~~~~~~~~~~~~~~~~~~----------------~----------~~~~~~f~~f~~~~~~~~~ 391 (396)
T 4dc2_A 338 PFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIV----------------R----------KIDQSEFEGFEYINPLLMS 391 (396)
T ss_dssp SCCCCCCSSTTGGGSCHHHHTSCCCCCCCCHHHH----------------T----------TSCGGGGTTCCEECC----
T ss_pred CCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCHHH----------------C----------CCCCCCCCCCEEECCCCCC
T ss_conf 9768878966111258222158876688861111----------------0----------1331430881767742156
No 6
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=1.00 E-value=1 Score=482.85 Aligned_cols=335 Identities=36% Similarity=0.653 Sum_probs=281.6
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
Q ss_conf 54589907997760269659999999789968999995323213635799999999999935999557892231147704
Q 002619 491 RTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNL 570 (900)
Q Consensus 491 ~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~~L 570 (900)
++..++|++.++||+|+||+||+|+++.+++.||+|++++...........+.+|+.++..++||||++++++|.+...+
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred CCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 67865669888997489879999999689949999998889966699999999999999727998777898898428999
Q ss_pred EEEEEECCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf 999965179885778885-0789989999999999999999884590621379993896579919997057752333356
Q 002619 571 YLVMEYLNGGDLYSLLRK-VGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLINN 649 (900)
Q Consensus 571 yLVmEyl~GGSL~dlL~k-~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~ 649 (900)
|+||||++||+|.+++.+ .+.+++..+++|+.|++.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~-- 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME-- 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT--
T ss_pred EEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCHHHHHHCCC--
T ss_conf 999866789908999987168999999999999999999999859967366488992376899789713565311245--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC-----CCCCCCCCEEECHHHHHHHHHHCCCCCCC
Q ss_conf 5569999888989999999742235667766655799988734431-----79998421030025899999939999999
Q 002619 650 TIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILL-----GTEHGYAADWWSVGIILFEFITGIPPFTA 724 (900)
Q Consensus 650 s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~-----g~~ys~ksDIWSLGVILyELLtGk~PF~~ 724 (900)
.........+||+.|+|||++. +..|+.++|||||||++|||++|++||.+
T Consensus 228 ------------------------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 228 ------------------------DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp ------------------------TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ------------------------CCCCCCCCCCCCCCEECHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCC
T ss_conf ------------------------88724356668848538478753146777899857537779999999859999888
Q ss_pred CCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCCHHCHHHHHCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 9857999864118--98899999999988999997753599588--8992129999819998899930110016975588
Q 002619 725 ESPEIIFDNILNR--KIPWPCVPSDMSFEAQDLINRFLIHDPNQ--RLGANGAAEVKAHPFFKGVNWDSLALQKAVFVPQ 800 (900)
Q Consensus 725 ~s~~ei~~kIl~~--~l~~P~ip~~iS~elkDLIkklL~~DP~k--Rpsa~~a~EIL~HPFFk~idw~~L~~~~ppf~P~ 800 (900)
.+..+++.+|... ...+|.....+++++++||++||+.+|.+ |++ +.++++||||++++|+.+....|||+|.
T Consensus 284 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~---~~eil~Hpff~~i~w~~l~~~~~p~~P~ 360 (437)
T 4aw2_A 284 ESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG---IEDFKKHPFFSGIDWDNIRNCEAPYIPE 360 (437)
T ss_dssp SSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTT---THHHHTSGGGTTCCTTTGGGSCCSCCCC
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC---HHHHHCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 8756777766505664368843455799999999998314410268789---9999688855888978982188998896
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCH
Q ss_conf 9999986210000115899999999998768988879998720121028864359999986435612656301111224
Q 002619 801 PESVDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCPLDLSLINFSFKNLSQLASINH 879 (900)
Q Consensus 801 ~~s~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~~~~~F~g~t~k~~~~~~~~~~ 879 (900)
+.++.|+++|+..+......... .... .......+++|.||||++++.+..-+-
T Consensus 361 ~~~~~d~~~fd~~~~~~~~~~~~----------------~~~~---------~~~~~~~~~~f~~~~~~~~~~~~~~~~ 414 (437)
T 4aw2_A 361 VSSPTDTSNFDVDDDCLKNSETM----------------PPPT---------HTAFSGHHLPFVGFTYTSSCVLSDRSC 414 (437)
T ss_dssp CSSTTCCTTSCCC-------------------------------------------CCTTGGGTTCCEESSCTTSTTSC
T ss_pred CCCCCCHHHCCCCCCCCCCCCCC----------------CCCC---------CCCCCCCCCCCCCCCCCCCHHHCCCCC
T ss_conf 89844043369732235666678----------------9876---------555555676046897678344246786
No 7
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=1.00 E-value=1 Score=480.95 Aligned_cols=335 Identities=29% Similarity=0.553 Sum_probs=285.3
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
Q ss_conf 54589907997760269659999999789968999995323213635799999999999935999557892231147704
Q 002619 491 RTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNL 570 (900)
Q Consensus 491 ~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~~L 570 (900)
.+..++|++.+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.++..++||||++++++|.+...+
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 67750568888985389969999999999959999998868742168999999999999866998870588999638878
Q ss_pred EEEEEECCCCCHHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 9999651798857788850----789989999999999999999884590621379993896579919997057752333
Q 002619 571 YLVMEYLNGGDLYSLLRKV----GCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGL 646 (900)
Q Consensus 571 yLVmEyl~GGSL~dlL~k~----g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~ 646 (900)
|+||||++||+|.+++.+. ..+++..+++|+.||+.||.|||++||+||||||+|||++.+|++||+|||+++...
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEEEECCEEEECC
T ss_conf 99997046887899998732135553499999999999999999998698415787688799279977970043014505
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC-
Q ss_conf 3565569999888989999999742235667766655799988734431799984210300258999999399999999-
Q 002619 647 INNTIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAE- 725 (900)
Q Consensus 647 ~~~s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~- 725 (900)
. ........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.
T Consensus 341 ~---------------------------~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 A---------------------------GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp T---------------------------TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred C---------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 7---------------------------8864210147755428254427899918856864299999984899987776
Q ss_pred ---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH--CHHHHHCCCCCCCCCCCHHHHC--CCCCC
Q ss_conf ---8579998641189889999999998899999775359958889921--2999981999889993011001--69755
Q 002619 726 ---SPEIIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGAN--GAAEVKAHPFFKGVNWDSLALQ--KAVFV 798 (900)
Q Consensus 726 ---s~~ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa~--~a~EIL~HPFFk~idw~~L~~~--~ppf~ 798 (900)
...++...+......+| ..++.++++||.+||.+||.+||++. ++.++++||||++++|+.+..+ .|||+
T Consensus 394 ~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~ 470 (543)
T 3c4z_A 394 EKVENKELKQRVLEQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFV 470 (543)
T ss_dssp CCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred CCHHHHHHHHHHHHCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 42007899999860566787---436999999999866499767899865689999709211179989997078998977
Q ss_pred CCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 88999-----9986210000115899999999998768988879998720121028864359999
Q 002619 799 PQPES-----VDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCP 858 (900)
Q Consensus 799 P~~~s-----~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~ 858 (900)
|.+.. ..|+.+|+. ..+..++..+..++.+++++..+..|+.+|.++++|.+++...
T Consensus 471 P~~~~~~~~~~~d~~~f~~---~~~~~~~~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (543)
T 3c4z_A 471 PDSRTVYAKNIQDVGAFST---VKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWR 532 (543)
T ss_dssp CCSSSCCSCC----CCCC------CCCCCHHHHHHHHHHCCEECHHHHHHHHHHTTHHHHHTCSC
T ss_pred CCCCCCCCCCCHHHHHCCC---CCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHCCCC
T ss_conf 8843234578224565555---6787788204667635777887725777654215287744778
No 8
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=479.26 Aligned_cols=337 Identities=36% Similarity=0.673 Sum_probs=279.9
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
Q ss_conf 54589907997760269659999999789968999995323213635799999999999935999557892231147704
Q 002619 491 RTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNL 570 (900)
Q Consensus 491 ~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~~L 570 (900)
.+..++|++.+.||+|+||+||+|+++.+|+.||+|++++...........+.+|+.++..++||||++++++|++...+
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred CCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 67755079998983088959999999899989999997177854078999999999999736999762489999649989
Q ss_pred EEEEEECCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf 99996517988577888507-89989999999999999999884590621379993896579919997057752333356
Q 002619 571 YLVMEYLNGGDLYSLLRKVG-CLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLINN 649 (900)
Q Consensus 571 yLVmEyl~GGSL~dlL~k~g-~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~ 649 (900)
|+||||++||+|.+++.+.+ .+++..+++|+.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~-- 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA-- 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT--
T ss_pred EEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECHHHEECCC--
T ss_conf 999848889909999986589999999999999999999999978953065278994666789889953602122157--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC-------CCCCCCCCEEECHHHHHHHHHHCCCCC
Q ss_conf 5569999888989999999742235667766655799988734431-------799984210300258999999399999
Q 002619 650 TIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILL-------GTEHGYAADWWSVGIILFEFITGIPPF 722 (900)
Q Consensus 650 s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~-------g~~ys~ksDIWSLGVILyELLtGk~PF 722 (900)
.........+||+.|+|||++. +..|+.++|||||||++|||++|++||
T Consensus 215 ------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf 270 (412)
T 2vd5_A 215 ------------------------DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270 (412)
T ss_dssp ------------------------TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ------------------------CCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf ------------------------88510000336567579999963066767778775776567758999998589998
Q ss_pred CCCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCHHHHHCCCCCCCCCCCHHHHCCCCCCCC
Q ss_conf 999857999864118--988999999999889999977535995888992129999819998899930110016975588
Q 002619 723 TAESPEIIFDNILNR--KIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGANGAAEVKAHPFFKGVNWDSLALQKAVFVPQ 800 (900)
Q Consensus 723 ~~~s~~ei~~kIl~~--~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa~~a~EIL~HPFFk~idw~~L~~~~ppf~P~ 800 (900)
.+.+..+++.+|... ...+|..+..+|.++++||++||+ +|.+|++..++.++++||||++++|+.+....|||+|.
T Consensus 271 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~~~~~p~~p~ 349 (412)
T 2vd5_A 271 YADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPD 349 (412)
T ss_dssp CCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTSTTSCCSCCCC
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC-CHHHCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 88987899999982566767886556799999999998757-91330799899998569774898988994569998886
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHH
Q ss_conf 99999862100001158999999999987689888799987201210288643599999864356126563011
Q 002619 801 PESVDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCPLDLSLINFSFKNLSQL 874 (900)
Q Consensus 801 ~~s~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~~~~~F~g~t~k~~~~~ 874 (900)
..+..|++||+........... .... + . .+.. .......+.+|.||||++....
T Consensus 350 ~~~~~d~~~f~~~~~~~~~~~~-~~~~------~---~----~~~~------~~~~~~~~~~f~g~~~~~~~~~ 403 (412)
T 2vd5_A 350 FEGATDTCNFDLVEDGLTAMVS-GGGE------T---L----SDIR------EGAPLGVHLPFVGYSYSCMALR 403 (412)
T ss_dssp -----CCSSCC--CCCCCTTSS-SSSC------C---T----TTC-----------CCTTGGGTTCCBSCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCC------C---C----CCCC------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7994423345864200000024-5677------7---5----5455------7776555777799722076422
No 9
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=1.00 E-value=1 Score=478.35 Aligned_cols=328 Identities=38% Similarity=0.718 Sum_probs=286.8
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEECCC
Q ss_conf 5554589907997760269659999999789968999995323213635799999999999935-999557892231147
Q 002619 489 KERTSIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITV-RNPFVVRFFYSFTCR 567 (900)
Q Consensus 489 ~~~~~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L-~HPnIVkL~~~f~~~ 567 (900)
...+.+++|++.+.||+|+||.||+|+++.+++.||+|++++...........+.+|..++..+ +||||+++++++++.
T Consensus 17 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~ 96 (353)
T 3txo_A 17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP 96 (353)
T ss_dssp ------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred CCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEC
T ss_conf 68886416389999961798899999992899899999998788302247999999999998646999162699999709
Q ss_pred CEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 70499996517988577888507899899999999999999998845906213799938965799199970577523333
Q 002619 568 DNLYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLI 647 (900)
Q Consensus 568 ~~LyLVmEyl~GGSL~dlL~k~g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~ 647 (900)
..+|+||||++||+|.+++.+.+.+++..+++|+.||+.||.|||++||+||||||+|||++.+|++||+|||+|+...
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~- 175 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI- 175 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC-
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCEEECC-
T ss_conf 9899997178999179999874899999999999999999999997887525887899898789988976535502045-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCH
Q ss_conf 56556999988898999999974223566776665579998873443179998421030025899999939999999985
Q 002619 648 NNTIDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAESP 727 (900)
Q Consensus 648 ~~s~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~s~ 727 (900)
.........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+.
T Consensus 176 --------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 229 (353)
T 3txo_A 176 --------------------------CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229 (353)
T ss_dssp --------------------------C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred --------------------------CCCCCCCCCCCCCCEECHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCH
T ss_conf --------------------------588631455798586884014799969864787252899999709999989998
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH---HCHHHHHCCCCCCCCCCCHHHHC--CCCCCCCCC
Q ss_conf 7999864118988999999999889999977535995888992---12999981999889993011001--697558899
Q 002619 728 EIIFDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGA---NGAAEVKAHPFFKGVNWDSLALQ--KAVFVPQPE 802 (900)
Q Consensus 728 ~ei~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa---~~a~EIL~HPFFk~idw~~L~~~--~ppf~P~~~ 802 (900)
.+++.+|......+| ..++.++.+||++||.+||.+||++ .++.++++||||++++|+.+..+ .|||+|...
T Consensus 230 ~~~~~~i~~~~~~~p---~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~ 306 (353)
T 3txo_A 230 DDLFEAILNDEVVYP---TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIK 306 (353)
T ss_dssp HHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred HHHHHHHHCCCCCCC---CCCCHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCC
T ss_conf 999999972998799---88997899999997050998706986558999974087656779889960868999668778
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 9998621000011589999999999876898887999872012102886435999998643561265630
Q 002619 803 SVDDTSYFLSRFSQISSGLPDDQNGSYSDADTCDSSSNSRTEMDECGDLAEFGSCPLDLSLINFSFKNLS 872 (900)
Q Consensus 803 s~~D~s~fds~fs~~~~~l~~~d~~~~s~~~t~~~s~~~~~~~~e~~~f~~~~~~~~~~~F~g~t~k~~~ 872 (900)
+..|+++|+..|+...+.+.+.+.... . . .....|.||||.+.+
T Consensus 307 ~~~~~~~f~~~~~~~~~~~~~~~~~~~----------------~------~----~~~~~f~~f~~~~~~ 350 (353)
T 3txo_A 307 SREDVSNFDPDFIKEEPVLTPIDEGHL----------------P------M----INQDEFRNFEYVSPE 350 (353)
T ss_dssp STTCCTTSCHHHHTSCCCCCCCCTTSG----------------G------G----SCGGGGTTCCEECC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC----------------C------C----CCCCCCCCCEEECCC
T ss_conf 810102368200247876787653435----------------7------5----443424996440755
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=477.59 Aligned_cols=259 Identities=27% Similarity=0.515 Sum_probs=235.0
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEE
Q ss_conf 58990799776026965999999978996899999532321363579999999999993599955789223114770499
Q 002619 493 SIDDFEIIKPISRGAFGRVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNLYL 572 (900)
Q Consensus 493 ~~~dyeilk~LGkGsFG~Vyla~~k~tg~~VAIKvLkk~~~~~~~~~e~il~Ei~IL~~L~HPnIVkL~~~f~~~~~LyL 572 (900)
.+++|++++.||+|+||+||+|+++.+|+.||+|++++... .....+.+.+|+.+|+.++|||||+++++|.+.+.+|+
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 51255884797027793999999889998999999865878-97999999999999987799898919999998999999
Q ss_pred EEEECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99651798857788850--7899899999999999999998845906213799938965799199970577523333565
Q 002619 573 VMEYLNGGDLYSLLRKV--GCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNLLIAHDGHIKLTDFGLSKIGLINNT 650 (900)
Q Consensus 573 VmEyl~GGSL~dlL~k~--g~Lse~~ar~ii~QIl~AL~yLHs~GIIHRDIKPeNILLd~~G~VKLsDFGLAk~~~~~~s 650 (900)
|||||+||+|.+++... ..+++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||+|+...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~---- 176 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---- 176 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC----
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEEC----
T ss_conf 9948899839999997389999789999999999999999998991513597899798789998976465214406----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 56999988898999999974223566776665579998873443179998421030025899999939999999985799
Q 002619 651 IDLSGPETDGIMPSDAHYPEYQQTDNRNRHSAVGTPDYLAPEILLGTEHGYAADWWSVGIILFEFITGIPPFTAESPEII 730 (900)
Q Consensus 651 ~dls~~~~~~~~~s~~~~~~~~~~~~~~~~s~vGTp~YmAPEvL~g~~ys~ksDIWSLGVILyELLtGk~PF~~~s~~ei 730 (900)
.......+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..++
T Consensus 177 -----------------------~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~ 233 (350)
T 4b9d_A 177 -----------------------STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233 (350)
T ss_dssp -----------------------HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -----------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf -----------------------885410145788360399998799989599999999999999978799899699999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCHHHHHCCCCCCC
Q ss_conf 986411898899999999988999997753599588899212999981999889
Q 002619 731 FDNILNRKIPWPCVPSDMSFEAQDLINRFLIHDPNQRLGANGAAEVKAHPFFKG 784 (900)
Q Consensus 731 ~~kIl~~~l~~P~ip~~iS~elkDLIkklL~~DP~kRpsa~~a~EIL~HPFFk~ 784 (900)
+.+|..+.. |.++..+|+++++||.+||++||.+||+ +.++|+||||+.
T Consensus 234 ~~~i~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~s---~~e~l~hp~~~~ 282 (350)
T 4b9d_A 234 VLKIISGSF--PPVSLHYSYDLRSLVSQLFKRNPRDRPS---VNSILEKGFIAK 282 (350)
T ss_dssp HHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCC---HHHHHTSHHHHT
T ss_pred HHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCC---HHHHHCCHHHHC
T ss_conf 999980899--9997557999999999985589667908---999963997616
Done!