Your job contains 1 sequence.
>002624
MRLSTAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE
VDAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYSSPFPLRLKRPWPVGLPAFHGIKDEDLGINSQLMWLRGDGDRGMQSLNFQGLGVT
PWMQPRMDASMLGLQNDMYQAMAAAALREMRAVDPSKPNAASLMQFQQPQNLPSRTSALV
QSQMLQQSHPQQTFLQGVQENQHQSQSQTHSQSHLLQPQLQHSHSFNNQQQQPLPQPQQQ
VDHQQIPSAVSAMSQFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLG
SYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQ
NSISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIP
FASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSGSFGRS
LDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSV
WCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATRQDSRNLSAGITSVGSLDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002624
(899 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 2103 0. 2
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 1818 2.2e-231 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 1431 5.5e-186 4
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 1223 1.8e-159 2
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 1009 3.6e-120 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 950 5.9e-118 2
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 960 4.2e-115 2
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 883 6.4e-108 3
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 885 1.2e-106 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 901 2.8e-105 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 731 1.3e-91 3
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 723 2.9e-90 3
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 741 1.9e-89 2
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 866 1.3e-86 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 727 1.3e-86 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 693 2.2e-84 2
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 526 1.6e-81 3
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 505 4.2e-77 3
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 499 2.1e-74 3
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 426 1.5e-51 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 440 1.2e-40 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 154 5.8e-08 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 133 3.7e-07 2
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 126 6.4e-07 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 137 1.1e-06 2
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 142 1.7e-06 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 135 1.8e-06 2
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 136 3.5e-06 2
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 140 3.7e-06 2
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 126 7.0e-06 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 122 1.0e-05 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 128 1.8e-05 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 131 1.9e-05 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 129 2.8e-05 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 125 0.00015 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 117 0.00016 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 124 0.00020 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 125 0.00027 2
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 116 0.00028 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 110 0.00043 1
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 2103 (745.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 399/485 (82%), Positives = 428/485 (88%)
Query: 1 MRLSTAGFSPQHQE--GEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTN 58
MRLS+AGF+PQ E GEKRVLNSELWHACAGPLVSLP VGSRVVYFPQGHSEQVAASTN
Sbjct: 1 MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60
Query: 59 KEVDAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGT 118
KEVDAHIPNYPSL PQLICQLHNVTMHAD+ETDEVYAQMTLQPL+ QEQK+ YLPAELG
Sbjct: 61 KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120
Query: 119 LSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWK 178
S+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHDNEWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180
Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSS 238
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRP TVMPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS 240
Query: 239 VLSSDSMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRF 298
VLSSDSMHLGLL TNSRFTIFYNPRASPSEFVIPLAKY+KAVYHTRVSVGMRF
Sbjct: 241 VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300
Query: 299 RMLFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
RMLFETEESSVRRYMGTITGI DLDP +W NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP 360
Query: 359 LTTFPMYSSPFPLRLKRPWPVGLPAFHGIKDEDLGIN--SQLMWLRGDGDRGMQSLNFQG 416
LTTFPMY SPFPLRLKRPWP GLP+FHG+K++D+G++ S LMW DRG+QSLNFQG
Sbjct: 361 LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW-----DRGLQSLNFQG 415
Query: 417 LGVTPWMQPRMDAS-MLGLQNDMYQXXXXXXXXXXXXVDPSKPNAASLMQFQQPQNLPSR 475
+GV PWMQPR+D S +LG+QND+YQ +DP+K AASL+QFQ +
Sbjct: 416 MGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDPAKA-AASLLQFQNSPGFSMQ 474
Query: 476 TSALV 480
+ +LV
Sbjct: 475 SPSLV 479
Score = 1137 (405.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 240/360 (66%), Positives = 276/360 (76%)
Query: 548 SAVSAMSQFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDES 607
+ VSAMSQF S SQ + P+Q+++SLC QQSFSD+NG NPI SPLH+LL +++QDES
Sbjct: 578 AVVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGG--NNPI-SPLHTLLSNFSQDES 634
Query: 608 SHLLNLPRSNPLIHSPTWPSKRAAVEPLFS-SGAPQCVLPSV-EQLGPPH-ANISQNSIS 664
S LL+L R+N + S WPSKR AV+ F SGA SV EQLG H +N+ N++S
Sbjct: 635 SQLLHLTRTNSAMTSSGWPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVS 694
Query: 665 LPPFPG-RECSIDQEGSA-DPQSHLLFGVNIEPSSLLMQNEMSSLGGVG-SNSDSTTIPF 721
LPPFPG RECSI+QEGSA DP SHLLFGVNI+ SSLLM N MS+L +G DSTT+PF
Sbjct: 695 LPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPF 754
Query: 722 ASSNYMSTAGADFSVNPEIA-PSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSGSFGRS 780
SSN+ + DFS N + PSSCIDESGFLQS EN+G NP + TFVKVYKSGSFGRS
Sbjct: 755 TSSNFNN----DFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRS 810
Query: 781 LDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSV 840
LDI+KFSSYHELRSELARMFGLEG LEDP+RSGWQLVFVDRENDVLLLGD PWPEFV+SV
Sbjct: 811 LDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 870
Query: 841 WCIKILSPPEVQQMGKRGNELLNSVP----IQRL-SNSSCDDYATRQDSRNLSAGITSVG 895
WCIKILSP EVQQMGKRG ELLNS P + +L SN +CDD+ R D RNL GI SVG
Sbjct: 871 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNCDDFGNRSDPRNLGNGIASVG 930
Score = 54 (24.1 bits), Expect = 5.2e-221, Sum P(2) = 5.2e-221
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 560 SQSQSPPMQAISSLCQQQSFSDSNGNPATNP--IVSPLHSLLGSYAQDESSHLLNLPRSN 617
SQ+QS Q+ + L QQQ N NP+ + +VS + S GS +Q +S L ++
Sbjct: 549 SQAQS---QSNNHLSQQQQQVVDNHNPSASSAAVVSAM-SQFGSASQPNTSPLQSM---T 601
Query: 618 PLIHSPTWPSKRAAVEPL 635
L H ++ P+
Sbjct: 602 SLCHQQSFSDTNGGNNPI 619
Score = 44 (20.5 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 95 AQMTLQPLSPQEQKEAYL 112
+Q Q LS Q+Q++AYL
Sbjct: 522 SQQQQQQLSQQQQQQAYL 539
Score = 37 (18.1 bits), Expect = 3.3e-219, Sum P(2) = 3.3e-219
Identities = 16/64 (25%), Positives = 23/64 (35%)
Query: 555 QFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLP 614
Q S Q Q Q L QQQ G P T+ S S ++ + +++
Sbjct: 511 QQLSQQQQQQLSQQQQQQLSQQQQQQAYLGVPETHQPQSQAQSQSNNHLSQQQQQVVD-- 568
Query: 615 RSNP 618
NP
Sbjct: 569 NHNP 572
Score = 37 (18.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 93 VYAQMTLQPLSPQEQKEAYLPAELGTLSKQ 122
V QM Q LS Q+Q+ + + LS+Q
Sbjct: 479 VQPQMLQQQLSQQQQQLSQQQQQQQQLSQQ 508
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 1818 (645.0 bits), Expect = 2.2e-231, Sum P(2) = 2.2e-231
Identities = 352/481 (73%), Positives = 391/481 (81%)
Query: 1 MRLSTAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60
M+LST+G Q EGEK LNSELWHACAGPLVSLP+ GSRVVYFPQGHSEQVAA+TNKE
Sbjct: 1 MKLSTSGLGQQGHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLS 120
VD HIPNYPSLPPQLICQLHNVTMHAD+ETDEVYAQMTLQPL+P+EQKE ++P ELG S
Sbjct: 60 VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119
Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180
KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHD EWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179
Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVL 240
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI N+KNQL LGIR A RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239
Query: 241 SSDSMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRM 300
SSDSMH+GLL TNS FT+F++PRAS SEFVI L+KYIKAV+HTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299
Query: 301 LFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
LFETEESSVRRYMGTITGISDLD V+WPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Query: 361 TFPMYSSPFPLRLKRPWPVGLPAFHGIKDEDLGINSQLMWLRGDG--DRGMQSLNFQGLG 418
TFPMY S FPLRLKRPW G + + DLG S L WLRG G +G+ LN+ +G
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPDGRG-DLG--SGLTWLRGGGGEQQGLLPLNYPSVG 416
Query: 419 VTPWMQPRMDASMLGLQNDM-YQXXXXXXXXXXXXVDPSKPNAASLMQFQQPQNLPSRTS 477
+ PWMQ R+D S +G N+ YQ DP + +Q Q+P + + S
Sbjct: 417 LFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQ---FVQLQEPHHQYLQQS 473
Query: 478 A 478
A
Sbjct: 474 A 474
Score = 437 (158.9 bits), Expect = 2.2e-231, Sum P(2) = 2.2e-231
Identities = 102/223 (45%), Positives = 138/223 (61%)
Query: 642 QCVLP---SVEQLGPPHANISQNSISLPP-FPGRECSIDQEGSADPQSHLLFGVNIEPSS 697
Q VLP + E P +N +SLP +PG+ +++ +PQ+ LFGV+ + S
Sbjct: 592 QSVLPEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEP---GNPQNPSLFGVDPD-SG 647
Query: 698 LLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPEN 757
L + + + S+ D+ P + ++ +G S+ SC+ ++ +
Sbjct: 648 LFLPSTVPRFAS--SSGDAEASPMS----LTDSGFQNSLY------SCMQDTTH-ELLHG 694
Query: 758 VGQVNPPNRT--FVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQ 815
GQ+N N+T FVKVYKSGS GRSLDI++FSSYHELR EL +MF +EG LEDPLRSGWQ
Sbjct: 695 AGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQ 754
Query: 816 LVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRG 858
LVFVD+END+LLLGD PW FVN+VW IKILSP +V QMG G
Sbjct: 755 LVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMGDHG 797
Score = 54 (24.1 bits), Expect = 7.2e-191, Sum P(2) = 7.2e-191
Identities = 31/123 (25%), Positives = 43/123 (34%)
Query: 616 SNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGRECSI 675
S PL +P K A+EP G PQ PS+ + P + + LP R S
Sbjct: 613 SEPLSLPQAYPGKSLALEP----GNPQN--PSLFGVDP------DSGLFLPSTVPRFASS 660
Query: 676 DQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGS-NSDSTTIPFASSNYMSTAGADF 734
+ A P S G S + L G G NS + T F + G
Sbjct: 661 SGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVGRSL 720
Query: 735 SVN 737
++
Sbjct: 721 DIS 723
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 1431 (508.8 bits), Expect = 5.5e-186, Sum P(4) = 5.5e-186
Identities = 286/482 (59%), Positives = 346/482 (71%)
Query: 1 MRLSTAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60
M+ + GF P EGEK+ +NS+LWHACAGPLVSLP VGS VVYFPQGHSEQVAAS K+
Sbjct: 1 MKAPSNGFLPSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60
Query: 61 VDAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGT-L 119
D IPNYP+LP +LIC LH+VT+HAD ETDEVYAQMTLQP++ + +EA L +++G L
Sbjct: 61 TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYD-REALLASDMGLKL 118
Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 179
++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQE++A+DLHD W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 178
Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSV 239
RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLF+ ++K+QL+LGIRRANR + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSV 238
Query: 240 LSSDSMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFR 299
+SSDSMH+G+L +S FTIF+NPRASPSEFV+PLAKY KA+Y +VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFR 297
Query: 300 MLFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
M+FETE+ VRRYMGT+TGISDLDPV+W S WR+++VGWDESTAG+R RVS+WEIEP+
Sbjct: 298 MMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV 357
Query: 360 TTFPMYSSPFPL-RLKRPWPVGLPAFHGIKDEDLGINSQLMWLRGD-GDRGMQSLNFQGL 417
T P Y P P R K P G+P D + + W+ D G + QS F GL
Sbjct: 358 IT-PFYICPPPFFRPKYPRQPGMPDDE--LDMENAFKRAMPWMGEDFGMKDAQSSMFPGL 414
Query: 418 GVTPWMQPRMDASMLGLQNDMYQXXXXXXXXXXXXV--DPSKPNAASLMQFQQPQNLPSR 475
+ WM + + + G DPSK L+ FQ P NL S
Sbjct: 415 SLVQWMSMQQNNPLSGSATPQLPSALSSFNLPNNFASNDPSK-----LLNFQSP-NLSSA 468
Query: 476 TS 477
S
Sbjct: 469 NS 470
Score = 336 (123.3 bits), Expect = 5.5e-186, Sum P(4) = 5.5e-186
Identities = 112/311 (36%), Positives = 156/311 (50%)
Query: 578 SFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFS 637
S SDS A+NP V L++ S S ++N+ + H + K A + +
Sbjct: 781 SASDSVFERASNP-VQELYTKTESRI---SQGMMNMKSAGE--H---FRFKSAVTDQIDV 831
Query: 638 SGAPQCVLPSVEQLGPPHANISQNSISLPPFP-GRECSIDQEGSADPQSHLLFGVNIEPS 696
S A P V +GP Q + LP F +C S P+++L F N+E
Sbjct: 832 STAGTTYCPDV--VGPVQ---QQQTFPLPSFGFDGDCQ-----SHHPRNNLAFPGNLEAV 881
Query: 697 S---LLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIA-PSSCIDESGFL 752
+ L Q + +L N+ SS +S+ F + P I C +E G +
Sbjct: 882 TSDPLYSQKDFQNLVPNYGNTPRDIETELSSAAISSQS--FGI-PSIPFKPGCSNEVGGI 938
Query: 753 QSPE--NVGQVNPPN----RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHL 806
N G + P RT+ KV K GS GRS+D+T++S Y ELR +LARMFG+EG L
Sbjct: 939 NDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQL 998
Query: 807 EDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVP 866
EDPL S W+LV+ D END+LL+GD PW EFVN V IKILS EVQQM G+ L ++P
Sbjct: 999 EDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGD--LAAIP 1056
Query: 867 IQRLSNSSCDD 877
+N +C +
Sbjct: 1057 T---TNQACSE 1064
Score = 67 (28.6 bits), Expect = 6.1e-154, Sum P(3) = 6.1e-154
Identities = 66/275 (24%), Positives = 96/275 (34%)
Query: 555 QFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLP 614
Q + S SQ +Q + L QQQ P + + P S L + LL+
Sbjct: 636 QSSKPSPSQQLQLQLLQKLQQQQQ---QQSIPPVSSSLQPQLSALQQTQSHQLQQLLSSQ 692
Query: 615 RSNPLIH-SPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNSISLPPFPGREC 673
PL H + ++P+ P Q S + L + S ++ P C
Sbjct: 693 NQQPLAHGNNSFPASTFMQPPQIQVSPQQQGQMSNKNLVAAGRSHSGHTDGEAP----SC 748
Query: 674 SIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDST--------------TI 719
S SA+ H N+ P++ L +N+ S SDS T
Sbjct: 749 STSP--SANNTGH----DNVSPTNFLSRNQQQGQAASVSASDSVFERASNPVQELYTKTE 802
Query: 720 PFASSNYMS--TAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSGSF 777
S M+ +AG F + + +G P+ VG V +TF SF
Sbjct: 803 SRISQGMMNMKSAGEHFRFKSAVTDQIDVSTAGTTYCPDVVGPVQQ-QQTF----PLPSF 857
Query: 778 GRSLDITKFSSYHELRSELARMFGLEGHLEDPLRS 812
G D S+H R+ LA LE DPL S
Sbjct: 858 GFDGDC---QSHHP-RNNLAFPGNLEAVTSDPLYS 888
Score = 47 (21.6 bits), Expect = 5.5e-186, Sum P(4) = 5.5e-186
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 551 SAMSQFASVSQSQSPPMQAISSLCQQQSFSDSNGN-PATNPIVSP 594
S Q +++ Q+QS +Q + S QQ + N + PA+ + P
Sbjct: 669 SLQPQLSALQQTQSHQLQQLLSSQNQQPLAHGNNSFPASTFMQPP 713
Score = 40 (19.1 bits), Expect = 5.5e-186, Sum P(4) = 5.5e-186
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 435 QNDMYQXXXXXXXXXXXXVDPSKPNAASLMQFQQPQNLPS 474
Q +Y P++P S Q QQ LP+
Sbjct: 527 QQGIYNNGTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPT 566
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 1223 (435.6 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 228/361 (63%), Positives = 282/361 (78%)
Query: 13 QEGEKR-VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSL 71
Q G ++ V+NSELWHACAGPLV LP VGS V YF QGHSEQVA ST + +PNYP+L
Sbjct: 43 QSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNL 102
Query: 72 PPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTL--SKQPTNYFCK 129
P QL+CQ+HNVT+HAD ++DE+YAQM+LQP+ +++ + + G L SK PT +FCK
Sbjct: 103 PSQLMCQVHNVTLHADKDSDEIYAQMSLQPV--HSERDVFPVPDFGMLRGSKHPTEFFCK 160
Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKR 189
TLTASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N W FRHI+RGQPKR
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 220
Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGL 249
HLLTTGWS+FV +KRL AGDSVLFI ++K+QL++G+RRANR T +PSSVLS+DSMH+G+
Sbjct: 221 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 280
Query: 250 LXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSV 309
L + F IFYNPRA P+EFVIPLAKY KA+ +++SVGMRF M+FETE+S
Sbjct: 281 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 340
Query: 310 RRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIE-P--LTTFPMYS 366
RRYMGTI GISDLDP++WP S WR+++V WDE ++ RVS W+IE P L FP +
Sbjct: 341 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLT 400
Query: 367 S 367
S
Sbjct: 401 S 401
Score = 352 (129.0 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 102/294 (34%), Positives = 148/294 (50%)
Query: 592 VSPLHSLLGSYAQ-----DESSHLLNLPRS--NPLIHSPTWPSKRAAVEPLFSSGAPQCV 644
VS SL GSY Q + S + LP S +PL H W ++ ++ F +P
Sbjct: 618 VSSFQSLAGSYKQPFILSSQDSSAVVLPDSTNSPLFHD-VWDTQLNGLK--FDQFSPLMQ 674
Query: 645 LPSVEQLGPPHANISQNSISLPPFPGRE----CSIDQEGSADPQSHLLFGVNIEPSSLLM 700
+N + ++I PP C+I + S L G N + +
Sbjct: 675 QDLYASQNICMSNSTTSNILDPPLSNTVLDDFCAIKDTDFQNHPSGCLVGNNNTSFAQDV 734
Query: 701 QNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVNPEIAPSSC-IDESGFLQSPENVG 759
Q++++S S +DS F+ ++ +G + + + C + ++ S + +
Sbjct: 735 QSQITS----ASFADSQA--FSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIA 788
Query: 760 QVNPPNRTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFV 819
P RT+ KV K+GS GRS+D+T F Y EL+S + MFGLEG L P SGW+LV+V
Sbjct: 789 --TPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYV 846
Query: 820 DRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 873
D E+DVLL+GD PW EFV V CI+ILSP EVQQM + G +LLNS I L S
Sbjct: 847 DYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAGINDLKTS 900
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 1009 (360.2 bits), Expect = 3.6e-120, Sum P(2) = 3.6e-120
Identities = 195/374 (52%), Positives = 259/374 (69%)
Query: 4 STAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDA 63
ST + + + L ELWHACAGPLV++P RV YFPQGH EQV ASTN+ +
Sbjct: 42 STRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQ 101
Query: 64 HIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQP 123
+P Y LP +L+C++ NV + A+ +TDEVYAQ+TL P + Q++ A L +
Sbjct: 102 QMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQ 160
Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIF 183
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DLH NEW+FRHIF
Sbjct: 161 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIF 220
Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSD 243
RGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ + +L +G+RRA R +PSSV+SS
Sbjct: 221 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 280
Query: 244 SMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFE 303
SMHLG+L T + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M FE
Sbjct: 281 SMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFE 339
Query: 304 TEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
EE+ +R+ GTI GI + DP +WP S WRS+KV WDE+++ R RVS W++EP P
Sbjct: 340 GEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPP 399
Query: 364 MYSSPFPL-RLKRP 376
S P P+ R KRP
Sbjct: 400 ALS-PVPMPRPKRP 412
Score = 194 (73.4 bits), Expect = 3.6e-120, Sum P(2) = 3.6e-120
Identities = 41/101 (40%), Positives = 62/101 (61%)
Query: 755 PENVGQVNPPNRTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSG 813
P++ +R+ KV+K G + GRS+D++KF +Y EL +EL R+F G L P +
Sbjct: 722 PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKD 780
Query: 814 WQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 854
W +V+ D END++L+GD PW EF V I I + EV++M
Sbjct: 781 WLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
Score = 43 (20.2 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 693 IEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAG 731
+ P +L ++E ++ VG SD+ AS+ +S+AG
Sbjct: 821 MNPGTLSCRSEEEAV--VGEGSDAKDAKSASNPSLSSAG 857
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 950 (339.5 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 199/388 (51%), Positives = 250/388 (64%)
Query: 4 STAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDA 63
S+ S G + SELWHACAGPL LP G+ VVYFPQGH EQ A +
Sbjct: 46 SSGSSSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPL 104
Query: 64 HIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSP--------QEQKEAYLPAE 115
IP + L PQ++C++ NV + A+ +TDEVY Q+TL PL +E KE E
Sbjct: 105 EIPKF-DLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEE 163
Query: 116 L-GTLS-KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLH 173
G+ S K+ + FCKTLTASDTSTHGGFSVPRRAAE F PLD+ QQ P+QELIA+DLH
Sbjct: 164 RNGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLH 223
Query: 174 DNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPT 233
EWKFRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ ++ +L LGIRRA RP
Sbjct: 224 GVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRN 283
Query: 234 VMPSSVLSSDSMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVS 293
+P S++ +S +L T S F +FY+PRA+ +EFVIP KYI ++ + V
Sbjct: 284 GLPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVC 341
Query: 294 VGMRFRMLFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSL 353
+G RFRM FE ++S RR G +TG+ DLDP +WPNS WR + V WDES + Q RVS
Sbjct: 342 IGTRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSP 401
Query: 354 WEIEPLTTFPMYSSPFPLRLKRPWPVGL 381
WEI+P + P S R KRPW GL
Sbjct: 402 WEIDPSVSLPHLSIQSSPRPKRPW-AGL 428
Score = 232 (86.7 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 61/201 (30%), Positives = 101/201 (50%)
Query: 678 EGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGADFSVN 737
+ S P + FG E QNE GG+ +N + +PF G++ ++N
Sbjct: 586 QSSGPPSRAINFGE--ETRKFDAQNE----GGLPNNV-TADLPFKIDMMGKQKGSELNMN 638
Query: 738 PEIAPSSCIDESGF---LQSPENVGQVNPPNRTFVKVYKSGS-FGRSLDITKFSSYHELR 793
A S C GF +++P + Q + R KV+K GS GR++D+++ + Y +L
Sbjct: 639 ---ASSGC-KLFGFSLPVETPASKPQ-SSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLL 693
Query: 794 SELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQ 853
EL R+F +EG L DP GW++++ D END++++GD PW +F N VW I + + EV+
Sbjct: 694 MELERLFNMEGLLRDP-EKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVEN 752
Query: 854 MGKRGNELLNSVPIQRLSNSS 874
L + ++ S
Sbjct: 753 ANDDNKSCLEQAALMMEASKS 773
Score = 46 (21.3 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 560 SQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDESSHLLNLPRSNPL 619
+QS PP +AI+ + + F N N + + L + + + S L S
Sbjct: 585 NQSSGPPSRAINFGEETRKFDAQNEGGLPNNVTADLPFKIDMMGKQKGSELNMNASSGCK 644
Query: 620 IHSPTWPSKRAAVEPLFSS 638
+ + P + A +P SS
Sbjct: 645 LFGFSLPVETPASKPQSSS 663
Score = 37 (18.1 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 749 SGFLQSPENVGQVNP 763
S LQ EN+G +P
Sbjct: 454 SKVLQGQENIGSASP 468
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 960 (343.0 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 191/364 (52%), Positives = 254/364 (69%)
Query: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 82
ELWHACAGPLV+LP G RV YFP+GH EQ+ AS ++ ++ +P++ +LP +++C++ N+
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVINI 80
Query: 83 TMHADIETDEVYAQMTLQPLSPQEQKEAYLP-AELGTLSKQPTNYFCKTLTASDTSTHGG 141
A+ ETDEVYAQ+TL P +Q E P A + K + FCKTLTASDTSTHGG
Sbjct: 81 QRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGG 138
Query: 142 FSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVS 201
FSV RR A+ PPLD SQQPP QEL+A DLH++EW FRHIFRGQP+RHLLTTGWSVFVS
Sbjct: 139 FSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVS 198
Query: 202 AKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXXXXXXXTNS 261
+K+LVAGD+ +F+ + +L +G+RR R T +PSSV+SS SMH+G+L T +
Sbjct: 199 SKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGT 258
Query: 262 RFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 321
F++FY PR S SEF++ + +Y++A ++SVGMRF+M FE EE+ +R+ GTI G+ +
Sbjct: 259 IFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVGVQE 317
Query: 322 LDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSS-PFP-LRLKRPWPV 379
W +S WRS+KV WDE ++ R RVS WE+EPL SS P P R KRP P
Sbjct: 318 NKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPP 377
Query: 380 GLPA 383
GLP+
Sbjct: 378 GLPS 381
Score = 195 (73.7 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 82/311 (26%), Positives = 140/311 (45%)
Query: 559 VSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLGSYAQDES-SHLLNLPRSN 617
VS + P+ A S+ Q N P + SP G D + P S
Sbjct: 347 VSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTPSSV 406
Query: 618 PLIHSPTWPSKRAAVEPLFSSGAPQCVLPSV-EQLGPPHANISQNSISLPPFPGRECSID 676
PL SP P+K A F G + S+ P +A+ + S + F E +
Sbjct: 407 PLF-SP--PAKAAT----FGHGGNKSFGVSIGSAFWPTNADSAAESFA-SAF-NNESTEK 457
Query: 677 QEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIPFASSNYMSTAGAD-FS 735
++ + + LFG + + + +E S V S + + P S+ + S ++ +
Sbjct: 458 KQTNGNVCR--LFGFELVEN--VNVDECFSAASV-SGAVAVDQPVPSNEFDSGQQSEPLN 512
Query: 736 VNPEIAPSSCID-ESGFLQSPENVGQVNPPNRTFVKVYKSGS-FGRSLDITKFSSYHELR 793
+N PS D E L+SP+ + R+ KV+ GS GR++D+T+ Y +L
Sbjct: 513 INQSDIPSGSGDPEKSSLRSPQE--SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLF 570
Query: 794 SELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQ 853
+L MF ++G L + + WQ+V+ D E+D++++GD PW EF V I I +P EV++
Sbjct: 571 KKLEEMFDIKGELLESTKK-WQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKK 629
Query: 854 MGKRGNELLNS 864
+ + +N+
Sbjct: 630 LSPKNKLAVNA 640
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 883 (315.9 bits), Expect = 6.4e-108, Sum P(3) = 6.4e-108
Identities = 182/371 (49%), Positives = 247/371 (66%)
Query: 1 MRLSTAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60
++L G++ + E L +ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+
Sbjct: 23 LKLIAVGWNLGSNDDE---LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQG 79
Query: 61 V-DAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTL 119
V D IP + +LPP+++C++ +VT+ A+ ETDEVYAQ+TLQP Q + + P L
Sbjct: 80 VVDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPP-LVEP 137
Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 179
+K + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ARDLH EW+F
Sbjct: 138 AKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRF 197
Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSV 239
+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + L +G+RR + + MP+SV
Sbjct: 198 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASV 257
Query: 240 LSSDSMHLGLLXXXXXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFR 299
+SS SM LG+L T + F +FY PR S +F+I + KY+ A+ + S+GMR+R
Sbjct: 258 ISSQSMRLGVLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNG-FSLGMRYR 314
Query: 300 MLFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
M FE EES R + GTI G DL +WP S WRS+++ WDE ++ +R +VS WEIEP
Sbjct: 315 MRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF 373
Query: 360 TTFPMYSSPFP 370
+ P +P P
Sbjct: 374 S--PSALTPTP 382
Score = 171 (65.3 bits), Expect = 6.4e-108, Sum P(3) = 6.4e-108
Identities = 49/131 (37%), Positives = 69/131 (52%)
Query: 735 SVNPEIAPSS--CIDESGFLQSPENVGQVNPPNRTFVKVYKSGS-FGRSLDITKFSSYHE 791
SV+ I+ S+ C D + SP+ Q R+ +KV G+ GR++D+T SY E
Sbjct: 480 SVDSNISDSTTKCQDPNSS-NSPKEQKQ-QTSTRSRIKVQMQGTAVGRAVDLTLLRSYDE 537
Query: 792 LRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEV 851
L EL +MF +EG L P + W +VF D E D +L+GD PW EF + I EV
Sbjct: 538 LIKELEKMFEIEGELS-P-KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595
Query: 852 QQMGKRGNELL 862
++M R LL
Sbjct: 596 KKM--RSKSLL 604
Score = 47 (21.6 bits), Expect = 6.4e-108, Sum P(3) = 6.4e-108
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 646 PSVEQLGPPHANISQNSISLPPFPGRECSIDQEGSADPQSHLLFGVNI--EPSSLLMQNE 703
PSV+ L A +NS G +C I + + S LFG ++ +P+S + ++
Sbjct: 419 PSVKLLFQDPAT-ERNSNKSVFSSGLQCKITE--APVTSSCRLFGFDLTSKPASATIPHD 475
Query: 704 MSSLGGVGSN-SDSTT 718
L V SN SDSTT
Sbjct: 476 -KQLISVDSNISDSTT 490
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 885 (316.6 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
Identities = 180/383 (46%), Positives = 244/383 (63%)
Query: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHI--PNYPSLPPQLIC 77
L ELW CAGPLV +P RV YFPQGH EQ+ AST ++VD + P + LPP+++C
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEAST-QQVDLNTMKPLFV-LPPKILC 66
Query: 78 QLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTASDTS 137
+ NV++ A+ +TDEVYAQ+TL P+ + + L + + F K LTASDTS
Sbjct: 67 NVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTS 126
Query: 138 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 197
THGGFSV R+ A + PPLD +QQ P QEL+A D+H +WKF+HIFRGQP+RHLLTTGWS
Sbjct: 127 THGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWS 186
Query: 198 VFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXXXXXX 257
FV++KRLVAGD+ +F+ + +L +G+RRAN + MPSSV+SS SMHLG+L
Sbjct: 187 TFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHAT 246
Query: 258 XTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
T + F ++Y PR S +F+I L KY++A+ + + SVGMRF+M FE E+S RRY GT+
Sbjct: 247 QTKTMFIVYYKPRTS--QFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPERRYSGTVI 303
Query: 318 GISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLKRPW 377
G+ D P W +S WR ++V WDE + R +VS WEIEP L+ KRP
Sbjct: 304 GVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 362
Query: 378 PVGLPAFHGIKDEDLGINSQLMW 400
V + D+GI + +W
Sbjct: 363 QVS-----EVSALDVGITASNLW 380
Score = 190 (71.9 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 754 SPENV-GQVNPPNRTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLR 811
SP+ V + + R+ KV G GR++D+ Y+EL ++ ++F ++G L R
Sbjct: 510 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--R 567
Query: 812 SGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM--GKRGNELLNSVPIQR 869
+ W++VF D E D++L+GD PWPEF N V I I S EV++M G + LL V
Sbjct: 568 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVETTL 627
Query: 870 LSNSSCDDYA 879
+ S D+++
Sbjct: 628 TTTSKTDNHS 637
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 901 (322.2 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 182/351 (51%), Positives = 240/351 (68%)
Query: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAH-IPNYPSLPPQLICQ 78
L +ELW CAGPLV +P RV YFPQGH EQ+ ASTN+ +++ IP + LPP+++C+
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80
Query: 79 LHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTASDTST 138
+ +VT+ A+ ETDEVYAQ+TLQP Q + + P +G +KQ + F K LTASDTST
Sbjct: 81 VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGP-TKQEFHSFVKILTASDTST 139
Query: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
HGGFSV R+ A + P LD +Q P QEL+ RDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 199 FVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXXXXXXX 258
FVS+KRLVAGD+ +F+ + L +G+RR R + MP+SV+SS SMHLG+L
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259
Query: 259 TNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
T + F +FY PR S +F++ + KY++A+ H S+G RFRM FE EES R + GTI G
Sbjct: 260 TTTIFVVFYKPRIS--QFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVG 316
Query: 319 ISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYSSP 368
DL +WP S WRS++V WDE T +R +VS WEIEP L T P+ S+P
Sbjct: 317 SGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPI-STP 365
Score = 161 (61.7 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 41/114 (35%), Positives = 62/114 (54%)
Query: 765 NRTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDREN 823
+R+ KV G + GR++D+T SY EL EL MF ++G L R W +VF D E
Sbjct: 488 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 545
Query: 824 DVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 877
D++L GD PW EF I I S EV++M + ++ +S+ + N S ++
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTK-LKISSSLENEEYGNESFEN 598
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 731 (262.4 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 148/362 (40%), Positives = 216/362 (59%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V AST +E++ P P
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE YA++TL P + + +P + + N F K LTA
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMP----DTTQVVIPTQNQNQFRPLVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS HGGFSVP++ A + PPLD SQ P QE++A DLH N+W+FRHI+RG +RHLLT
Sbjct: 133 SDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLT 192
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
GW+ F ++K+LV GD ++F+ + +L +GIRRA +PSS++S +SM G++
Sbjct: 193 IGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASA 252
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
F + Y PR+S +F++ K++ V + + +VG RF M FE ++ S RR
Sbjct: 253 KHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERRSF 309
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 373
GTI G+SD P W S WRS++V WDE + R +VS W+IE LT + S L+
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLKN 368
Query: 374 KR 375
KR
Sbjct: 369 KR 370
Score = 178 (67.7 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 40/112 (35%), Positives = 63/112 (56%)
Query: 748 ESGFLQSPENVGQVN-PPNRTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGH 805
+S L+SP + RT KV G + GR++D++ + Y +L EL ++F L+G
Sbjct: 491 QSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQ 550
Query: 806 LEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKR 857
L+ R+ W++ F + E D +L+G+ PWPEF N V I I S EV+ + R
Sbjct: 551 LQ--ARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSR 600
Score = 37 (18.1 bits), Expect = 1.3e-91, Sum P(3) = 1.3e-91
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 686 HLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIP 720
HL N+ SS L + +GS+S S +P
Sbjct: 353 HLTPWSNVSRSSFLKNKRSREVNEIGSSS-SHLLP 386
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 723 (259.6 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 151/364 (41%), Positives = 217/364 (59%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V ST +E++ P LP
Sbjct: 18 DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE YA++TL P + + +P + + N F K LTA
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS HGGF VP++ A + P LD SQ PAQEL+A DLH N+W+F H +RG P+RHLLT
Sbjct: 133 SDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLT 192
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
TGW+ F ++K+LVAGD ++F+ + +L +GIRRA +PSS++S D M G++
Sbjct: 193 TGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASA 252
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
FT+ Y PR+S +F++ K++ AV + + +VG RF M E ++ S RR
Sbjct: 253 KHAFDNQCMFTVVYKPRSS--KFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRCF 309
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSP--FPL 371
GTI G+SD P W S WRS++V WDE T+ +VS W+IE L P + P F L
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSFLL 366
Query: 372 RLKR 375
+ KR
Sbjct: 367 KNKR 370
Score = 163 (62.4 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 752 LQSPENVGQVN-PPNRTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDP 809
L+SP + +RT KV G + GR++D++ + Y +L EL ++F ++G L+
Sbjct: 496 LRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT- 554
Query: 810 LRSGWQLVFVDRENDVLLLGDGPWPEFVNSV 840
R+ W++ F D + D +L+GD PWPEF N V
Sbjct: 555 -RNQWEIAFTDSDEDKMLVGDDPWPEFCNMV 584
Score = 47 (21.6 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 686 HLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIP 720
HL+ +N+ S LL + + +GS+S S +P
Sbjct: 353 HLMPAINVPRSFLLKNKRLREVNEIGSSS-SHLLP 386
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 741 (265.9 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 151/361 (41%), Positives = 219/361 (60%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G V YFPQG+ E V AST +E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE+YA++TL P + + +P + + N F K LTA
Sbjct: 77 KLQCRVIAIHLKVENNSDEIYAEITLMP----DTTQVVIPTQSENRFRPLVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS +GGFSVP++ A + PPLD SQ PAQE++A DLHDN+W+FRH +RG P+RH LT
Sbjct: 133 SDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLT 192
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
TGW+ F+++K+LV GD ++F+ + +L +GIRRA +PSS++S D M G++
Sbjct: 193 TGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASA 252
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
F + Y PR+S +F++ K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 253 KHAFDNQCIFIVVYKPRSS--QFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYF 309
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 373
GTI G+SD P W S WRS++V WDE + R +VS WEIE L P + P L
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV--PALNVPRSSLL 366
Query: 374 K 374
K
Sbjct: 367 K 367
Score = 171 (65.3 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 72/265 (27%), Positives = 117/265 (44%)
Query: 606 ESSHL---LNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQNS 662
E HL LN+PRS+ L +KR F S + +LP + G I Q S
Sbjct: 350 EIEHLVPALNVPRSSLL------KNKRLREVNEFGSSSSH-LLPPILTQGQ---EIGQLS 399
Query: 663 ISLPPFPGRECSIDQEGSADPQSHLLFGVNIEPSSLL-MQNEM--------SSLGGVGSN 713
++ P E + +P S LL ++P L N+M ++ G
Sbjct: 400 VASPMNISLRYRDTTEAAMNP-SRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAGTNFR 458
Query: 714 SDSTTI--PFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVN-PPNRTFVK 770
T+ P + + G+D S ++ +S L+SP + +RT K
Sbjct: 459 LFGVTLDTPPMIKDPIKQIGSDIS---KLTERKKFGQSQTLRSPIEIQSKQFSSSRTCTK 515
Query: 771 VYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLG 829
V G + GR++D++ + Y +L EL ++F ++G L+ R+ W++ F D + +L+G
Sbjct: 516 VQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIAFTDSDGYEMLVG 573
Query: 830 DGPWPEFVNSVWCIKILSPPEVQQM 854
D PWPEF V I I S EV+ +
Sbjct: 574 DDPWPEFCKMVKKILIYSKEEVKNL 598
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 187/384 (48%), Positives = 246/384 (64%)
Query: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 82
ELWHACAGPL+SLP GS V+YFPQGH EQ + A I Y LPP + C++ +V
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-----DFSAAI--Y-GLPPHVFCRILDV 105
Query: 83 TMHADIETDEVYAQMTLQPLSPQ-EQK--EAYLPAELG-----TLSKQPTNY-FCKTLTA 133
+HA+ TDEVYAQ++L P S E+K E + + G L + T + FCKTLTA
Sbjct: 106 KLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTA 165
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTSTHGGFSVPRRAAE FPPLD+SQ P+QEL+ARDLH EW+FRHI+RGQP+RHLLT
Sbjct: 166 SDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLT 225
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
TGWS FV+ K+LV+GD+VLF+ D +L LG+RRA++ S + +M+
Sbjct: 226 TGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEV 285
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
T+S F+I YNP+AS S F+IP K++K V + +GMRF+ E+E++S RR
Sbjct: 286 AHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESEDASERRSP 344
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTFPMYSSPFP 370
G I+GISDLDP++WP S WR + V WD+ A Q RVS WEIEP ++ + + P
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGP 404
Query: 371 LRLKRPWPVG---LPAFHGIKDED 391
R + + G +P GI+ D
Sbjct: 405 KRSRIGFSSGKPDIPVSEGIRATD 428
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 727 (261.0 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 149/361 (41%), Positives = 217/361 (60%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G ++ YFPQG+ E V AST +E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE YA++TL P + + +P + + N F K LTA
Sbjct: 77 KLQCRVIAIQLKVENNSDETYAEITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS GGF VP++ A + PPLD SQ P QEL+A DLH N+W+F H +RG P+RHLLT
Sbjct: 133 SDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLT 190
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
TGW+ F ++K+LVAGD ++F+ + +L +GIRRA +PSS++S +SM G++
Sbjct: 191 TGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASA 250
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
F + Y PR+S +F++ K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 251 KHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYF 307
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRL 373
GTI G+SD P W S WR+++V WDE + R +VS WEIE L P + P P L
Sbjct: 308 GTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNVPRPSLL 364
Query: 374 K 374
K
Sbjct: 365 K 365
Score = 158 (60.7 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 68/252 (26%), Positives = 111/252 (44%)
Query: 606 ESSHL---LNLPRSNPLIHSPTWPSKRAA-VEPLFSSGAPQCVLPSVEQLGPPHANISQN 661
E HL LN+PR + L +KR V + SS + +LP + G I Q
Sbjct: 348 EIEHLMPALNVPRPSLL------KNKRLREVNEIGSSSSH--LLPPILTQGQ---EIGQL 396
Query: 662 SISLPPFPGRECSIDQEGSADPQSHLLFGVNIEP-------SSLLMQNEMSSLGGVGSN- 713
S++ P E +P S LL ++P + ++ Q E + G+N
Sbjct: 397 SVASPMNISLTYRDTTEDVMNP-SRLLMSYPVQPMPKLNYNNQMVTQIEENITTKTGTNF 455
Query: 714 ---SDSTTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVN-PPNRTFV 769
S P + + G++ S ++ +S L+SP + RT
Sbjct: 456 RLFGVSLVTPSVIKDPIEEIGSEIS---KLTEGKKFGQSQTLRSPTEIQSKQFSSTRTCT 512
Query: 770 KVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLL 828
KV G + R++D++ + Y +L EL +F L+G L+ R+ W++ F D ++D +L+
Sbjct: 513 KVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQT--RNQWEIAFTDSDDDKMLV 570
Query: 829 GDGPWPEFVNSV 840
GD PWPEF N V
Sbjct: 571 GDDPWPEFCNMV 582
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 693 (249.0 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 140/346 (40%), Positives = 205/346 (59%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G V YFPQG+ E V AST +E++ P LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE YA++TL P + + +P + + N F K LTA
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMP----DTTQVVIPTQSENQFRPLVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS +GGF VP++ A + PPL PAQEL+A+DLH N+W+FRH +RG P+RH LT
Sbjct: 133 SDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLT 188
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
TGW+ F ++K+LV GD ++F+ + +L +GIRRA +PSS++S D M G++
Sbjct: 189 TGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASA 248
Query: 254 XXXXXTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
F + Y P S+F++ K++ A+ + + VG RF M FE ++ S RRY
Sbjct: 249 KHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRYF 307
Query: 314 GTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
GTI G++D P W S WRS++V WDE + R +VS WEIE L
Sbjct: 308 GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL 352
Score = 171 (65.3 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 716 STTIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVN-PPNRTFVKVYKS 774
S IP + + G+D S ++ +S L+SP + RT KV
Sbjct: 447 SLAIPLVIKDPIEEIGSDIS---KLTEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQ 503
Query: 775 G-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPW 833
G + GR++D++ + Y +L EL ++F L+G L+ R+ W++ F D + +L+GD PW
Sbjct: 504 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIAFTDSDGYEMLVGDDPW 561
Query: 834 PEFVNSVWCIKILSPPEVQQM 854
PEF V I I S EV+ +
Sbjct: 562 PEFCKMVKKILIYSKEEVKNL 582
Score = 43 (20.2 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 686 HLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTI--PFASS-NYMSTAGADFSVNP 738
HL+ +N+ SSLL + + G ++ P +S Y T + ++NP
Sbjct: 351 HLMSALNVPRSSLLKNKRLREVNEFGQEIGQLSVASPMNTSLRYRDTT--EDAMNP 404
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 526 (190.2 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 105/223 (47%), Positives = 148/223 (66%)
Query: 16 EKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQL 75
+++ L+ +LWHACAG +V +P++ S V YF QGH+E A D H P +PP +
Sbjct: 3 QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLI 55
Query: 76 ICQLHNVTMHADIETDEVYAQMTLQPLSPQE---QKEAYL----PAELGTLS-KQPTNYF 127
+C++ +V AD ETDEV+A++TL PL + + +A L P+ G + K+ F
Sbjct: 56 LCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASF 115
Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQP 187
KTLT SD + GGFSVPR AE +FP LD+S +PP Q +IA+D+H WKFRHI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTP 175
Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 230
+RHLLTTGWS FV+ K+L+AGDS++F+ ++ L +GIRRA R
Sbjct: 176 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 218
Score = 250 (93.1 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 55/130 (42%), Positives = 77/130 (59%)
Query: 263 FTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
F + Y PRAS EF + A +++ R GMRF+M FETE+SS + +MGT++ +
Sbjct: 287 FEVVYYPRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQV 345
Query: 322 LDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYSSPFPLRLK-R-PWP 378
DP++WPNS WR ++V WDE + RVS W +E ++ P ++ SPF R K R P P
Sbjct: 346 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQP 405
Query: 379 VGLPAFHGIK 388
P FHG K
Sbjct: 406 FEFP-FHGTK 414
Score = 88 (36.0 bits), Expect = 1.6e-81, Sum P(3) = 1.6e-81
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 770 KVY-KSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLL 828
KV+ +S GR+LD++ SY EL +LA MF H+E+ +V+ D + +
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMF----HIEERSDLLTHVVYRDANGVIKRI 639
Query: 829 GDGPWPEFVNS 839
GD P+ +F+ +
Sbjct: 640 GDEPFSDFMKA 650
Score = 49 (22.3 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 208 GDSVLFIWNDKNQLLLGIRRANRPPTVM--PSSVLSSDSMHLGLLXXXXXXXXTNSRFTI 265
G+S+ ++ ND N GI+ A + + PS L SD ++L + F
Sbjct: 428 GESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSD-LNLSSYTGNNKLHSP-AMFLS 485
Query: 266 FYNPR 270
+NPR
Sbjct: 486 SFNPR 490
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 505 (182.8 bits), Expect = 4.2e-77, Sum P(3) = 4.2e-77
Identities = 102/220 (46%), Positives = 143/220 (65%)
Query: 15 GEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74
G ++ L+ +LWHACAG +V +P + S+V YFPQGH+E VD N P +PP
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDC----VD--FGNLP-IPPM 63
Query: 75 LICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKE-AYLPAELGT---LSKQPTNYFCKT 130
++C++ + AD E+DEV+A++ L PL E + Y E + + T F KT
Sbjct: 64 VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKT 123
Query: 131 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 190
LT SD + GGFSVPR AE +FP LD++ +PP Q ++A+D+H + WKFRHI+RG P+RH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH 183
Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 230
LLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA R
Sbjct: 184 LLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKR 223
Score = 207 (77.9 bits), Expect = 4.2e-77, Sum P(3) = 4.2e-77
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 263 FTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
F + Y PRAS SEF + A +A GMRF+M FETE+SS + +MGT++ ++
Sbjct: 289 FEVVYYPRASTSEFCVK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNV 347
Query: 322 LDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYSSPF-PLRLKRPWP 378
DP++WPNS WR ++V WDE + RV+ W +E ++ P+ + F P R K P
Sbjct: 348 SDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLP 406
Score = 113 (44.8 bits), Expect = 4.2e-77, Sum P(3) = 4.2e-77
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 684 QSHL-LFGVNIEPSSLLMQNEMSSLGGVGS-NSDSTTIPFASSNYMSTAGADFSVNPEIA 741
+SH+ LFG I P + ++S G + N + T I SN AG +FS + E +
Sbjct: 516 KSHIVLFGKLILP-----EEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEGS 570
Query: 742 PSS--CIDESGFLQSPENVGQVNPPNRTFVKVYKSGSFGRSLDITKFSSYHELRSELARM 799
P S D SG G + F++ S GR+LD++ SY EL +L+ M
Sbjct: 571 PCSKKVHDASGL-----ETGHC----KVFME---SDDVGRTLDLSVLGSYEELSRKLSDM 618
Query: 800 FGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILS 847
FG++ + L S +++ D + G+ P+ EF+ + + IL+
Sbjct: 619 FGIKK--SEMLSS---VLYRDASGAIKYAGNEPFSEFLKTARRLTILT 661
Score = 56 (24.8 bits), Expect = 2.9e-51, Sum P(2) = 2.9e-51
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 805 HLEDPLR---SGWQLVFVD-RENDVL--LLGDGPW-PEFVNSVWCIKI--LSPPEVQQMG 855
++ DP+R S W+L+ V E D+L + PW E V++V I + SPP +
Sbjct: 346 NVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRL 405
Query: 856 KRG---NELLNSVPI 867
+ N L+NS+P+
Sbjct: 406 PQHPDYNNLINSIPV 420
Score = 45 (20.9 bits), Expect = 3.9e-60, Sum P(3) = 3.9e-60
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 603 AQDESSHLLNLPRSNPLIHSPTWPSKRAA-VEPL-FSSGAPQCVLPSVEQLGPPHANISQ 660
A DE L N+ R NP W + + V P+ +S +P P + P H + +
Sbjct: 364 AWDEPDLLQNVKRVNP------WLVELVSNVHPIPLTSFSP----PRKKMRLPQHPDYNN 413
Query: 661 --NSISLPPFP 669
NSI +P FP
Sbjct: 414 LINSIPVPSFP 424
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 499 (180.7 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 105/257 (40%), Positives = 147/257 (57%)
Query: 17 KRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 76
K + +LW+ CAGPL LP G +V YFPQGH E + ST E+D HI LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77
Query: 77 CQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYF-CKTLTASD 135
C++ + D TDEVYAQ++L P + + + T ++P YF K LTASD
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTEVMTHN---TTMDT--RRPIVYFFSKILTASD 132
Query: 136 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 195
S GG +P++ A + FPPLD SQ Q L+A+DL+ EW F+H+FRG P+RH+ T+G
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 196 --WSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVLSSDSMHLGLLXXX 253
WSVF + KRL+ GD + + + +L GIRRA +PSSV+S++ M G++
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 254 XXXXXTNSRFTIFYNPR 270
T F + Y PR
Sbjct: 253 VNAFKTKCMFNVVYKPR 269
Score = 153 (58.9 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 299 RMLFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
RM FE ++ S +RY GTI G++D+ P W +S WRS+KV WDE + R +VS W+IE
Sbjct: 269 RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH 327
Query: 359 LTTFPMYSSPFPLRLKRPW 377
L S L+ K+ W
Sbjct: 328 LIPSSDISQS-SLKKKKHW 345
Score = 148 (57.2 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 770 KVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLL 828
KV+ G + R++D+T Y++L +L +F L+ L R+ W++VF + E +L+
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEMLV 494
Query: 829 GDGPWPEFVNSVWCIKILSPPEVQQM 854
GD PWPEF N I I S E+++M
Sbjct: 495 GDDPWPEFCNMAKRIFICSKEEIKKM 520
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 426 (155.0 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 90/216 (41%), Positives = 129/216 (59%)
Query: 18 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLIC 77
R ++ +W ACAG V +P + SRV YFPQGH E + +P+ S P C
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLST-----LPSSTSPVP---C 65
Query: 78 QLHNVTMHADIETDEVYAQMTLQPLSPQE------QKEAYLPAELGTLSKQPTNYFCKTL 131
+ ++ + AD TDEV+A + LQP++ Q+ + ++ +K T F K L
Sbjct: 66 IITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT--FAKIL 123
Query: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
T SD + GGFSVPR A+ VFP L+F PP Q+L D+H W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183
Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRR 227
LTTGWS FV++K+L+AGDSV+F+ +++ +G+RR
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRR 219
Score = 142 (55.0 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 263 FTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGI-S 320
F + + P A SEFV+ A+ +++ + G R +M ETE+SS + + G ++
Sbjct: 284 FEVVFYPAAGWSEFVVR-AEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQ 342
Query: 321 DLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFP--LRLKRPWP 378
+ P W S W+ +++ WDE + RV+ W++E +PFP RLK P P
Sbjct: 343 ETGP--WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQP 400
Query: 379 VG 380
G
Sbjct: 401 GG 402
Score = 44 (20.5 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 823 NDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATRQ 882
N +G P F N+ LSP + +GK E++N + D+ +
Sbjct: 453 NPTGFIGGNPPQLFTNN-----FLSP--LPDLGKVSTEMMN------FGSPPSDNLSPNS 499
Query: 883 DSRNLSAGITSVGS 896
++ NLS+G VG+
Sbjct: 500 NTTNLSSGNDLVGN 513
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 91/213 (42%), Positives = 129/213 (60%)
Query: 14 EGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPP 73
+G K + +LW CAGPL +P +G +V YFPQGH E V AST +E++ PN LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPS 76
Query: 74 QLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLSKQPTNYFCKTLTA 133
+L C++ + + + +DE Y ++TL P + + +P E + N F K LTA
Sbjct: 77 KLQCRVIAIHLKVENNSDETYVEITLMP----DTTQVVIPTENENQFRPIVNSFTKVLTA 132
Query: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
SDTS G FSVP + A + PPLD SQ PAQELIA DLH N+W+F+H +R P+ T
Sbjct: 133 SDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--T 189
Query: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIR 226
TGW+ F ++K+LV GD ++F + +L +GIR
Sbjct: 190 TGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 105 QEQKEAYLPAELGTLSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPA 164
QE KE P E + S + + F K +T SD +P++ AE+ FP LD S +
Sbjct: 3 QEDKEK--PIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDS 59
Query: 165 QELIARDLHD---NEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--DKN 219
+ + + D N W+FR+ + + +++T GWS FV K+L AGD V F + +K+
Sbjct: 60 NKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKD 119
Query: 220 QLLLGIRRANRPP 232
+L + RR + P
Sbjct: 120 KLYIDWRRRPKIP 132
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 133 (51.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 36/107 (33%), Positives = 51/107 (47%)
Query: 768 FVKVYKSG-SFGRSLDITKFSSYHELRSELARMF--------GLEGHLEDPLR-----SG 813
F+KV G + GR +D+ SSY L L MF GL PLR S
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 814 WQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNE 860
+ L + D+E D +L+GD PW F+NSV ++++ E + R E
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237
Score = 53 (23.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 133 ASDTSTHGGFSVPRRAAEKV-FPPL 156
A+D+++H G S PR +++ V +PP+
Sbjct: 59 AADSASHAGSSPPRSSSQVVGWPPI 83
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 126 (49.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 768 FVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVL 826
FVKVY G GR LD+ FS Y L L+ MF + R L + D++ D +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 827 LLGDGPWPEFVNSVWCIKILSP 848
++GD PW F+ +V +KI P
Sbjct: 134 MVGDIPWDMFLETVRRLKITRP 155
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 186
F K +T SD +P++ AE+ FP LD S L +D + W+FR+ +
Sbjct: 56 FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYWNS 114
Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNDKNQLLLGIRRANRP 231
+ +++T GWS FV K+L AGD V F I ++ + L I +RP
Sbjct: 115 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRP 162
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 652 GPP--HANI--SQNSI--SLPPFPGRECSIDQEGSADPQSHL-----LFGVNIEPSSLLM 700
G P H NI S+ + S+P PGR + P S LFGVN+E +
Sbjct: 239 GSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTAGKRLRLFGVNMECGNDYN 298
Query: 701 QNEMSSL---GGVGSNSDSTT 718
Q E S L G +G++S S++
Sbjct: 299 QQEESWLVPRGEIGASSSSSS 319
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 764 PNRTFVKVYKSGSFGRSLDITKFSSY 789
P+ + V+ ++ G+FG + + S Y
Sbjct: 162 PDMSLVQAHQFGNFGFNFNFPTTSQY 187
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDFSQQPPAQELIA-RDLHDNEWKFRHIFR 184
F KT+T SD +P+ AEK FP PL + L+ D++ W+FR+ +
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW-NDKNQ 220
+ ++LT GWS FV KRL AGD + F ND++Q
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQ 279
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 135 (52.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 41/114 (35%), Positives = 56/114 (49%)
Query: 760 QVNPPNRT--FVKVYKSG-SFGRSLDITKFSSYHELRSELARMF-GLEG----HLEDPLR 811
+VNP + FVKV G GR +D+ SSY L L MF G+ G PLR
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLR 175
Query: 812 -----SGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNE 860
S + L + D+E D +L+GD PW F+NSV ++I+ E + R E
Sbjct: 176 LLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQE 229
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 133 ASDTSTHGGFSVPRRAAEKVFPPL 156
++++S+H G S PR + +PP+
Sbjct: 53 SAESSSHQGASPPRSSQVVGWPPI 76
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 136 (52.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 179
S++ + F K LT SD +P++ AE FP L+ +Q + +D + W+F
Sbjct: 29 SERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQNGTVLDF--QDKNGKMWRF 85
Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
R+ + + +++T GWS FV K+L AGD+V F
Sbjct: 86 RYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 606 ESSHLLNLPRSNPLIHS--PTWPSKRAAVEPLFSSGAPQ 642
+ H NL RS PL++ P +P+ R V P S PQ
Sbjct: 221 DQHHQWNLGRSEPLVYDSVPVFPAGR--VPP---SAPPQ 254
Score = 46 (21.3 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 664 SLPPFP-GRECSIDQEGSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTI 719
S+P FP GR + + LFGV++E SS + +G G +S S +
Sbjct: 238 SVPVFPAGRVPPSAPPQPSTTKKLRLFGVDVEESSS-SGDTRGEMGVAGYSSSSPVV 293
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 606 ESSHLLNLPRSNPLIHSPTWPSKRA-AVEPLFS 637
E + + N+ N + SPT+P+ R V P +S
Sbjct: 147 EINFVHNINNHNFVFGSPTYPTARFYPVTPEYS 179
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 140 (54.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 37/111 (33%), Positives = 55/111 (49%)
Query: 105 QEQKEAY-LPAELGTLSKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQP 162
++++EA L E G + F K +T SD +P++ AE+ FP LD S
Sbjct: 11 EDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNE 69
Query: 163 PAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
L DL W+FR+ + + +++T GWS FV K+L AGD V F
Sbjct: 70 KGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSF 120
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 869 RLSNSSCDDYATRQDSRNLS 888
RL +SS DD+ T++ +LS
Sbjct: 286 RLGSSSEDDHFTKKGKSSLS 305
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 126 (49.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 768 FVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHL-EDPLRS-------GWQLVF 818
+VKV K G + GR +D+ SSY EL + LARMF H E + + G + +
Sbjct: 94 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTY 153
Query: 819 VDRENDVLLLGDGPWPEFVNSVWCIKIL 846
D + D +L+GD PW +F SV +KIL
Sbjct: 154 EDGDGDWMLVGDVPWDDFARSVKRLKIL 181
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/132 (29%), Positives = 59/132 (44%)
Query: 719 IPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSG-SF 777
+ F SS+ G D N E +E ++ E + N +VKV G
Sbjct: 39 LSFGSSSGQYYNGGD---NHEYDGVGAAEEMMIMEEEEQ-NECNSVGSFYVKVNMEGVPI 94
Query: 778 GRSLDITKFSSYHELRSELARMFG---LEGHLEDPL-RSGWQLVFVDRENDVLLLGDGPW 833
GR +D+ + YH+L + L MF L ED L + D+E D +++GD PW
Sbjct: 95 GRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKEGDWMMVGDVPW 154
Query: 834 PEFVNSVWCIKI 845
F++SV +KI
Sbjct: 155 EMFLSSVRRLKI 166
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 128 (50.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA--RDLHDNEWKFRHIFR 184
F K LT SD +P++ AE+ FP + + L+ D W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--DKNQLLLGIRR 227
+ ++LT GWS +V K L AGD VLF + D + +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 660 QNSISLPPFP--GRECSIDQEGSADPQSHLLFGVNIE 694
Q++ SL +P G + Q G++ ++ LFGVN+E
Sbjct: 157 QSNASLQYYPHAGAQAVESQRGNS--KTLRLFGVNME 191
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDFSQQPPAQELIARDLHDNEW 177
F K+LT SD +P++ AEK FP D S L D W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--DKNQLLLGIRRANRPPTVM 235
+FR+ + + ++LT GWS FV K+L GD V F + D +L +G RR + +
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSS-- 163
Query: 236 PSSVLSSDS 244
SSV +++S
Sbjct: 164 -SSVAATNS 171
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR-------DLHD 174
Q + F K+LT SD +P++ AEK FP + + + + +A D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 175 NE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--DKNQLLLGIRRAN 229
WKFR+ + + ++LT GWS +V K L AGD V F + D ++L +G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRG 143
Query: 230 RPPTVMPSSVLSSDSM 245
+ SV+S +++
Sbjct: 144 EASSSPAVSVVSQEAL 159
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA-RDLHDNEWKFRHIFRG 185
F K +T SD +P++ AEK FP S LI D++ W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
+ ++LT GWS FV K L AGD V F
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 756 ENVGQVNPPNRTFVKVYKSGS-FGRSLDITKFSSYHELRSELARMFGLE-G-HLEDPLRS 812
E+ GQ N +VKV G+ + R +D+T + Y EL L MF G + E
Sbjct: 83 ESEGQGN-----YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYK 137
Query: 813 GWQLV--FVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRG 858
G V + D++ D +L+GD PW FV+S ++I+ EV+ +G G
Sbjct: 138 GSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGG 185
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 34/94 (36%), Positives = 46/94 (48%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP-P-----LDFSQQPPAQELI-ARDLHDNEWKF 179
F KT+T SD +P++ AEK FP P + + P LI D W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
R+ + + ++LT GWS FV K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 186
F K +T SD +P+ AEK FP + L D++ W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWND--KNQLLLG 224
+ ++LT GWS FV K L AGD V F ++ QL +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 688 LFGVNIEPSS 697
LFGVNI P S
Sbjct: 304 LFGVNISPES 313
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 759 GQVNPPNRTFVKVYKSGS-FGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLV 817
G+ N +VKV G+ + R +D+ + Y ELR L +FG + + +
Sbjct: 101 GRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVA 160
Query: 818 FVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQ 852
+ D++ D++L GD PW F++S ++I+ E +
Sbjct: 161 YEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEAR 195
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 110 (43.8 bits), Expect = 0.00043, P = 0.00043
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 767 TFVKVYKSGS-FGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQL-VFVDREND 824
++VKV G+ F R +D+ + Y +L S L +FG + +D L+ + ++ D++ D
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 825 VLLLGDGPWPEFVNSVWCIKIL 846
+L GD PW F+ S ++I+
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIM 156
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 899 821 0.00078 122 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 629 (67 KB)
Total size of DFA: 424 KB (2202 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.89u 0.11s 72.00t Elapsed: 00:00:03
Total cpu time: 71.90u 0.11s 72.01t Elapsed: 00:00:03
Start: Tue May 21 21:56:41 2013 End: Tue May 21 21:56:44 2013