BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002627
(899 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 558 bits (1438), Expect = e-158, Method: Compositional matrix adjust.
Identities = 362/900 (40%), Positives = 514/900 (57%), Gaps = 115/900 (12%)
Query: 8 GSSSSCQVSPLMLVQEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPG 67
G+SSS VSP Q+KG +NKRK ADP SPQN EF ++++
Sbjct: 20 GTSSS--VSP---PQDKGRKNKRKL-ADP----------SPQNAASLTEFP--RYELHSF 61
Query: 68 HGQTGACDLCGVNQDHSDGLKLDLGLSSAVGSSEVGPSRPREELEVEEFQDADWSDLTES 127
Q+ C ++ S+G +L+ EE W D
Sbjct: 62 KSQSPLC------ENDSNG-----------------------QLKAEESDSVGWDDPFAC 92
Query: 128 QLEELVLSNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFLR 187
LE L+ SNL +F+SA+ +I+ CGY E+V KA+ S G D VSNIV++TL+FL+
Sbjct: 93 HLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLVSNIVNDTLSFLK 152
Query: 188 SGQEINSSREHYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAM 247
SG+++ SR++ F+DL QL Y L E + ++REVRP ST +AMW LLICD+NV A +
Sbjct: 153 SGKKVAGSRDYVFEDLQQLVAYSLVEKISLVREVRPSLSTDEAMWRLLICDLNVLKAFEV 212
Query: 248 DGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLP------NPSKPVPSIPCSHSSQ 301
D D L + +E+ +E N P NP PV + + S Q
Sbjct: 213 DADGLEG-----------SSVSNASKSSESPVAECNPPKSSDADNPKAPVSN---TQSKQ 258
Query: 302 PEAPTVAGIPNITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFVGSR 361
E N+ SKN H K+ + + + + T S + TS S +EK V R
Sbjct: 259 SEPVKFGNFANVNNSKNPHASGATPGKEVFSVSTASGEGTKSASLTSVS---DEKLVSCR 315
Query: 362 KVHSGSSKREY-MLRQKSLHLEKHYRTYGSKGSSRAGKLSGLGGLILDKKLKSVSDTTSV 420
K G +K+E MLRQKS +EK RTY G + K GG +++K+ KS SD S
Sbjct: 316 K---GRTKKEMAMLRQKSC-VEK-IRTYSKGGGYKTAKF---GGFLVEKRGKSASDLLSA 367
Query: 421 NLKNASSKIS-KAIEVHQDNGSHNLSTSPGTSSPATFHSQGANAISALPKTSMPSTFPPG 479
+N+SSKI+ + +++ S LS S + SPA + ++ALP + P+
Sbjct: 368 QARNSSSKITTEVMKIPLAESSSTLSNSTKSDSPALDVKE---HVTALPANNAPA----- 419
Query: 480 GTPAVLPLANTLPVLSAADTELSLSLPTKSNSTQVPAGINSVAPNCGYAGILSDDTSLEH 539
P+A+ S ++ E S+ TK P Y + D +L
Sbjct: 420 ------PVASEKK--SGSEPEEKPSVSTK--------------PAPDYYAAIPYDATLGI 457
Query: 540 LVPQDKRDEIILKLIPRVRELHNQLHEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEV 599
+P++KRDE+ILKL+PR+++L +L +WT+WANQKV QA RL KD+ ELK LR+EKEE
Sbjct: 458 YIPRNKRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEA 517
Query: 600 ERLKKEKQILEENTMKKLSEMENALCKASGQVERANSAVRRLEVENTALRQEMEAAKLRA 659
E +KEKQ+LEENT+K+ SEME AL A+ Q+ER N+ +RRLE+E + L++E EAA +RA
Sbjct: 518 EEFRKEKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRA 577
Query: 660 AESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEKRKVVQLLQELDQAKALQEQLE 719
+ESA SC+E +R ++ QSWE QK L QEEL +++ KV L QE+ +AK Q Q+E
Sbjct: 578 SESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIE 637
Query: 720 ARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKSKAETNLMRYKDDIHRLEKEI 779
A W+QE+ A +L QA++++KER ++E K++E+ IK+KAE ++ Y ++I RL+ EI
Sbjct: 638 ATWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKAENDVKYYIENIKRLDTEI 697
Query: 780 SQLRLKTDSSKIAALRRGIDGSYAGRLTDIKSSSVHKESQTPLISEVMKDYHDFSGT-GG 838
S+L+LK+DS KIAAL++GIDG+ G KS H + K + + G
Sbjct: 698 SKLKLKSDSLKIAALKKGIDGNNDGN----KSGMNHTTNTKANSMASAKVWENNQGAESK 753
Query: 839 VKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPVRYAR 898
+KRERECVMCLSEEMSV+FLPCAHQV+C+ CN+LHEK+ M+DCPSCR+ IQRRI R+AR
Sbjct: 754 IKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQARFAR 813
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 356/900 (39%), Positives = 507/900 (56%), Gaps = 117/900 (13%)
Query: 15 VSPLMLVQEKGSRNKRKFRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGAC 74
VSP QEKG +NKRK ADP +PN S E P YE + + P
Sbjct: 25 VSP----QEKGRKNKRKL-ADP--SQPN---ASSLTEFPPYELPS----LKP-------- 62
Query: 75 DLCGVNQDHSDGLKLDLGLSSAVGSSEVGPSRPREELEVEEFQDADWSDLTESQLEELVL 134
Q+H G + +VG EV +L+VE + +W D LEEL+
Sbjct: 63 ------QNHLSG-------NGSVG--EVS-----NQLQVEVSESVEWDDPFACHLEELLS 102
Query: 135 SNLDAIFKSAIKKIVACGYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFLRSGQEINS 194
SNL +F +K+++ GY ++ KAV R L G + +SNIV+NTL+ L++G E
Sbjct: 103 SNLLTLFLDTMKQLIDLGYTDDEVLKAVSRCRLYCGGNNLLSNIVNNTLSALKTGDEGAG 162
Query: 195 SREHYFQDLPQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMDGDPLSS 254
S ++ F+DL QL Y L E++ +++EVRP ST +AMW LL+CD+NV A +GD L
Sbjct: 163 SGDYVFEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEGDGL-- 220
Query: 255 FSGDGASNGNSHITTQLQTKTEAKCSELNLP---NPSKPVPSIPCSHSSQPEAPTVAGIP 311
+++ + +E+ +E N P +P P P S++ E P
Sbjct: 221 ------------VSSSKLSDSESLGAESNPPKSSDPDNPKPPQSDPQSNRNEPLKFGNFP 268
Query: 312 NITKSKNSHVGSEISEKDGTNSISDNVDKTFSVAGTSQSPALEEKFVGSRKVHSGSSKRE 371
N SK + G S + + TS + +EK V RK G +K+E
Sbjct: 269 NTPNSKKTQSSGTTP---GKEVCSGSTVSCQGMRSTSFTLVSDEKLVSCRK---GRTKKE 322
Query: 372 Y-MLRQKSLHLEKHYRTYGSKGSSRAGKLSGLGGLILDKKLKSVSDTTSVNLKNASSKIS 430
MLRQKS +EK RTY +A K + +G +L+K++KS S+ +N+SSKI+
Sbjct: 323 IAMLRQKSC-VEK-IRTYSKGSGYKAAKFASVGSFLLEKRVKSSSEFVP---RNSSSKIT 377
Query: 431 KAIEVH----QDNGSHNLSTSPGTSSPATFHSQGANAISALPKTSMPS-TFPPGGTPAVL 485
I V +D+G S S ++G I+ALP S+ S + G+ +V
Sbjct: 378 AEIGVKVSLAEDSGCFVRKNSKLDSPVVVVDAKG--YITALPARSVKSASKKKTGSESV- 434
Query: 486 PLANTLPVLSAADTELSLSLPTKS-----NSTQVPAGINS-VAPNCGYAGILSDDTSLEH 539
TL + SA++ + S+P+ S + ++ A +++ +AP+ YAGI D +L
Sbjct: 435 ----TL-IPSASEKKSDSSIPSTSEKKSGSESEEKASVSAKLAPDY-YAGI-PYDAALGI 487
Query: 540 LVPQDKRDEIILKLIPRVRELHNQLHEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEV 599
VP+DK+DE+ILKL+PRV +L N+L WT+WANQKV +A RL KD+ ELK LR+E+EE
Sbjct: 488 YVPRDKKDELILKLVPRVNDLQNELQVWTDWANQKVKEATGRLLKDQPELKALRKEREEA 547
Query: 600 ERLKKEKQILEENTMKKLSEMENALCKASGQVERANSAVRRLEVENTALRQEMEAAKLRA 659
E+ KKEKQ+LEENT K+LSEM+ AL A+ Q+E+A + RLE+E + L++EMEAAK++A
Sbjct: 548 EQYKKEKQLLEENTRKRLSEMDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKA 607
Query: 660 AESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEKRKVVQLLQELDQAKALQEQLE 719
ESA S +E +R +++ SWE QK + QEEL ++ KV L +E+ +AK Q Q+E
Sbjct: 608 VESAESFREAKERGERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIE 667
Query: 720 ARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKSKAETNLMRYKDDIHRLEKEI 779
A +QE AK +L QAS IRKE +++EA K +E+ IK KAET++ Y D+I RLE+EI
Sbjct: 668 AALKQERTAKGKLSAQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREI 727
Query: 780 SQLRLKTDSSKIAALRRGIDGSYAGRLTDIKSSSVHKESQTPLISEVMKDYHDFSGTGGV 839
S+L+LK+D S+I AL++G S A + + G V
Sbjct: 728 SELKLKSDYSRIIALKKGSSESKATKRESL-------------------------GMPKV 762
Query: 840 KRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPVRYARS 899
KRERECVMCLSEEMSV+FLPCAHQV+C CN+LHEK+GM DCPSCR I RRI R+ARS
Sbjct: 763 KRERECVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQARFARS 822
>sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1
SV=1
Length = 711
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 222/376 (59%), Gaps = 24/376 (6%)
Query: 531 LSDDTSLEHLVPQDKRDEIILKLIPRVRELHNQLHEWTEWANQKVMQAARRLSKDKAELK 590
L+ D +LE V D +D +I+ L+ +V++ ++ E EWA + MQAA+++S++ AELK
Sbjct: 353 LNLDDNLES-VGVDDKDCVIVDLLHQVKDFEKKVKERKEWAQKNAMQAAQKVSEELAELK 411
Query: 591 TLRQEKEEVERLKKEKQILEENTMKKLSEMENALCKASGQVERANSAVRRLEVENTALRQ 650
TL E+E ++ LKK KQ +EE+T K+ ++ E L KA Q +RAN VR+LE +N +R
Sbjct: 412 TLSSEREGIQLLKKGKQAVEESTAKRFTDKEIELRKACSQNDRANVIVRKLENQNAEIRA 471
Query: 651 EMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEKRKVVQLLQELDQ 710
E E +KL A+ES +C E SK+EKK K +WEKQ Q+E+ EK K+ L + L Q
Sbjct: 472 EREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKALYKTLAQ 531
Query: 711 AKALQEQLEARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKSKAETNLMRYKD 770
++++EA+WRQE+KAKEE + Q ++ +E E K K + ++ K E + R+KD
Sbjct: 532 ITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDFQRHKD 591
Query: 771 DIHRLEKEISQLRLKTDSSKIAALRRGIDGSYAGRLTDIKSSSVH-KESQTPLISEVMKD 829
D RLE+E+ +L+ S + I +++ K+SQ I++++++
Sbjct: 592 DHQRLEQELGRLK----------------ASSDSDSSHISNNAWKPKKSQGENIAKLLEE 635
Query: 830 YHDFSGT--GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNE---LHEKQGMK-DCPS 883
G+ +REC++C+ +E+SVVFLPCAHQVVC +C++ G K CP
Sbjct: 636 IDKLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPC 695
Query: 884 CRSPIQRRIPVRYARS 899
CR +Q+RI + A S
Sbjct: 696 CRGLVQQRIRIFGATS 711
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 48/224 (21%)
Query: 32 FRADPPLGEPNKIIPSPQNECPTYEFTAEKFDITPGHGQTGACDLCGVNQDHSDGLKLDL 91
FR+DPPL KI S + E PG +G+ +L V ++
Sbjct: 21 FRSDPPLCWVEKIAMS--------QSIVENLVYHPGLTDSGSVNLNSVTEN--------- 63
Query: 92 GLSSAVGSSEVGPSRPREELEVEEFQDADWSDLTESQLEELVLSNLDAIFKSAIKKIVAC 151
P E W+ TE LEE++L +L+ ++ A+ K++
Sbjct: 64 ---------------PEENF---------WAYCTEEHLEEILLKHLEFLYNQAVSKLLEL 99
Query: 152 GYMEEVATKAVLRSGLCYGSKDTVSNIVDNTLAFLRSGQEINSSR-------EHYFQDLP 204
GY E VA KAVL +G CYG D ++NIV+N+L++L SG S E F DL
Sbjct: 100 GYEERVALKAVLSNGHCYGELDVLTNIVNNSLSYLNSGGGGGGSNGNGEDRTETGFTDLR 159
Query: 205 QLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVSHACAMD 248
LE+Y LA ++ +L++V+P S GDAMWCLL+ +++V A +D
Sbjct: 160 DLEEYSLAGMIYLLQQVKPNLSKGDAMWCLLMSELHVGRASTLD 203
>sp|A6H5Y1|MPP9_MOUSE M-phase phosphoprotein 9 OS=Mus musculus GN=Mphosph9 PE=2 SV=1
Length = 991
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 26/202 (12%)
Query: 586 KAELKTLRQEKEE-----VERLKKEKQILEENTMKKLSEMENALCKASGQVERANSAVRR 640
++E+ +L+Q+ E VE KK+ +IL + + ++++AL +A+ S VR
Sbjct: 421 ESEISSLKQKLEAKDISAVEEWKKKNEILAD----RCGQLDSALNEAT-------SRVRT 469
Query: 641 LEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEKRK 700
LE N L E+E + LR +AAS +E+ +M+ + EK + +T +
Sbjct: 470 LEKNNNLL--EIEVSDLRERFNAASSASKVLQERIEEMRTSNKEK------DNTITRLKC 521
Query: 701 VVQLLQE-LDQAKALQEQLEARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKS 759
+Q L+E + A L + EAR RQE K ++L+ + S+ KE +++ + + E+ +
Sbjct: 522 RLQDLEEAFENAYKLSDDKEARLRQENKMFQDLLGEYESLGKEHGRVKDTLNTTENKLLD 581
Query: 760 KAETNLMRYKDDIHRLEKEISQ 781
A T + K I +LE ++ Q
Sbjct: 582 -AHTQISDLKRTISKLEAQVKQ 602
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 839 VKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPV 894
+K + CV+C S ++V LPC H +C+ C + CP CRS I+ +I +
Sbjct: 891 LKDQNSCVICASNPPNIVLLPCRHSSLCSDC-----CSKLTKCPICRSHIENKISI 941
>sp|Q3UU96|MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha OS=Mus musculus
GN=Cdc42bpa PE=1 SV=2
Length = 1719
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 583 SKDKAELKTLRQEKEEVERLKKEKQILEENTMKKLSEMENA----LCKASGQVERANSAV 638
SKD E+K+L KEE+E+L+K Q+ E N +++ E N+ L A Q++ + +
Sbjct: 484 SKD-LEIKSL---KEEIEKLRK--QVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQI 537
Query: 639 RRLEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEK 698
+ L+ E L +E+ A R + ++ + K +F ++ EL T+K
Sbjct: 538 KTLQQEREELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLT----ELHTQK 593
Query: 699 RKVVQLL----QELDQAKALQEQLEARWRQEEKAKEE-------LVMQASSIRKEREQIE 747
+K+ + + +E+D E L R+ E+AK+E L+ +AS +K REQ E
Sbjct: 594 QKLARHVRDKEEEVDLVMQKAESLRQELRRAERAKKELEVHTEALIAEASKDKKLREQSE 653
Query: 748 ASAKSKEDMIKSKAETNLMRYKDDIHRLEKEISQLRLKTDSSK 790
+K E+ ++ + + Y I +E + +LKTD K
Sbjct: 654 HYSKQLENELEGLKQKQI-SYSPGICSIEHQQEITKLKTDLEK 695
>sp|Q99550|MPP9_HUMAN M-phase phosphoprotein 9 OS=Homo sapiens GN=MPHOSPH9 PE=1 SV=3
Length = 1031
Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 24/202 (11%)
Query: 586 KAELKTLRQEKEE-----VERLKKEKQILEENTMKKLSEMENALCKASGQVERANSAVRR 640
++E+ +L+Q+ E VE K QIL + + ++++AL +A+ +V +
Sbjct: 463 ESEINSLKQKLEAKEISGVEDWKITNQIL----VDRCGQLDSALHEATSRVRTLENKNNL 518
Query: 641 LEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEKRK 700
LE+E LR+ SAAS +E+ +M+ S EK ++ K +
Sbjct: 519 LEIEVNDLRERF---------SAASSASKILQERIEEMRTSSKEKDNT-----IIRLKSR 564
Query: 701 VVQLLQELDQAKALQEQLEARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKSK 760
+ L + + A L + EA+ +QE K ++L+ + S+ KE +++ + + E+ +
Sbjct: 565 LQDLEEAFENAYKLSDDKEAQLKQENKMFQDLLGEYESLGKEHRRVKDALNTTENKLLD- 623
Query: 761 AETNLMRYKDDIHRLEKEISQL 782
A T + K I +LE ++ Q+
Sbjct: 624 AYTQISDLKRMISKLEAQVKQV 645
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 40.4 bits (93), Expect = 0.066, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 667 QEVSKREKKTQMKFQSWEKQKALFQEELVTEKRKVVQLLQELDQAKALQEQLEARWRQEE 726
QE + +K+ ++K Q E+ + QE+L E+ Q + L + +AL+ Q + R ++EE
Sbjct: 2742 QEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEE 2801
Query: 727 KAKEELVMQASSIRKEREQIEASAKSKEDMIKSKAETNLMRYKDDIHRLE--KEISQLRL 784
+ K + + ++E+ Q E K +E K E + ++ + + E K Q RL
Sbjct: 2802 ELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERL 2861
Query: 785 KTDSSKIAALRRGIDGSYAGRLTDIKSSSVHKESQTPLISEVMKDYHDF 833
+ ++A + I + I + KE + ++ +K H
Sbjct: 2862 ERKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKLRHSL 2910
Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 577 QAARRLSKDKAELKTLRQEKEEVERLKKEKQILEENTMKKLSEM---ENALCKASGQVER 633
Q RL K++ ELK RQE+E +ER K+E+ EE ++ E E AL + + +
Sbjct: 2742 QEQERLQKEE-ELK--RQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798
Query: 634 ANSAVRRLEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWE---KQKALF 690
++R E E R E E + E QE + +K+ +K Q E K++ L
Sbjct: 2799 KEEELKRQEQE----RLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELK 2854
Query: 691 QEELVTEKRKVVQLLQELDQAKALQEQLEARWRQEEKAKEE 731
++E +RK ++L + K+ E + ++E KE+
Sbjct: 2855 RQEQERLERKKIELAEREQHIKSKLESDMVKIIKDELTKEK 2895
>sp|O54874|MRCKA_RAT Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus
GN=Cdc42bpa PE=1 SV=1
Length = 1732
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 583 SKDKAELKTLRQEKEEVERLKKEKQILEENTMKKLSEMENA----LCKASGQVERANSAV 638
SKD E+K+L KEE+E+L+K Q+ E N +++ E N+ L A Q++ +
Sbjct: 484 SKD-LEIKSL---KEEIEKLRK--QVAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQI 537
Query: 639 RRLEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEK 698
+ L+ E L +E+ A R + ++ + K +F ++ EL T+K
Sbjct: 538 KTLQQEREELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLT----ELHTQK 593
Query: 699 RKVVQLL----QELDQAKALQEQLEARWRQEEKAKEE-------LVMQASSIRKEREQIE 747
+K+ + + +E+D E L R+ E+AK+E L+ +AS RK REQ
Sbjct: 594 QKLARHVRDKEEEVDLVMQKAESLRQELRRAERAKKELEVHTEALIAEASKDRKLREQSR 653
Query: 748 ASAKSKEDMIKSKAETNLMRYKDDIHRLEKEISQLRLKTDSSK 790
+K E+ ++ + + Y I +E + +LKTD K
Sbjct: 654 HYSKQLENELEGLKQKQI-SYSPGICSIEHQQEITKLKTDLEK 695
>sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens
GN=CDC42BPA PE=1 SV=1
Length = 1732
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 583 SKDKAELKTLRQEKEEVERLKKEKQILEENTMKKLSEMENA----LCKASGQVERANSAV 638
SKD E+K L KEE+E+L+K Q+ E + +++ E NA L A Q++ +
Sbjct: 484 SKD-LEIKNL---KEEIEKLRK--QVTESSHLEQQLEEANAVRQELDDAFRQIKAYEKQI 537
Query: 639 RRLEVENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELVTEK 698
+ L+ E L +E+ A R + ++ + K +F ++ EL T+K
Sbjct: 538 KTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLT----ELHTQK 593
Query: 699 RKVVQLL----QELDQAKALQEQLEARWRQEEKAKEE-------LVMQASSIRKEREQIE 747
+K+ + + +E+D E L R+ E+AK+E L +AS RK REQ E
Sbjct: 594 QKLARHVRDKEEEVDLVMQKVESLRQELRRTERAKKELEVHTEALAAEASKDRKLREQSE 653
Query: 748 ASAKSKEDMIKSKAETNLMRYKDDIHRLEKEISQLRLKTDSSK 790
+K E+ ++ + + Y + +E + +LKTD K
Sbjct: 654 HYSKQLENELEGLKQKQI-SYSPGVCSIEHQQEITKLKTDLEK 695
>sp|Q6UWE0|LRSM1_HUMAN E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens GN=LRSAM1 PE=1
SV=1
Length = 723
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 844 ECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPVRYA 897
ECV+CL E ++FL C H C Q ++ CP CR I +R+ + ++
Sbjct: 674 ECVVCLEREAQMIFLNCGH-----VCCCQQCCQPLRTCPLCRQDIAQRLRIYHS 722
>sp|Q9FLH0|NMCP_ARATH Putative nuclear matrix constituent protein 1-like protein
OS=Arabidopsis thaliana GN=At5g65770 PE=2 SV=1
Length = 1042
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 690 FQEELVTEKRKVVQLLQELDQAKALQEQLEARWRQEEKAKEELVMQASSIRKEREQIEAS 749
+EEL + + +++L E D+ K + + EA W + +EEL +A I ++RE
Sbjct: 530 LKEELDDLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMY 589
Query: 750 AKSKEDMIKSKAETNLMRYKDDIHRLEKE 778
K + D IK + + ++K+D+ L +E
Sbjct: 590 LKDERDNIKEERDALRNQHKNDVESLNRE 618
>sp|Q9VJE5|CL190_DROME Restin homolog OS=Drosophila melanogaster GN=CLIP-190 PE=1 SV=1
Length = 1690
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 561 HNQLHEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVERLKKEKQILEEN-------- 612
HN++ + E A QK SK +L L+Q EE+++ ++KQ+L E
Sbjct: 1415 HNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANEELQKSLQQKQLLLEKGNEFDTQL 1474
Query: 613 --TMKKLSEMENALCKASGQVERANSAVRRLEVENTALRQEMEAAK 656
K + EM++A S +E+ + V LE TALRQ +A K
Sbjct: 1475 AEYQKVIDEMDDAASVKSALLEQLQNRVAELE---TALRQANDAQK 1517
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 163/395 (41%), Gaps = 82/395 (20%)
Query: 433 IEVHQDNGSHNLSTSPGTSSPATF-----HS----QGANAISALPKTSMPSTFPPGGTPA 483
I+V +D +TSP T A HS +G+ A PK + P TP
Sbjct: 95 IQVFEDGAD---TTSPETPESAALKVPKRHSRXAAKGSKLRGAKPKKTTARRPKPTRTPT 151
Query: 484 VLPLANTLP---VLSAADTELSLSLPTKSNSTQV-------PAGINSVAPNCG------- 526
P + T SA+ E+S S P+ T + P+ + VAP
Sbjct: 152 SAPSSGTAGPSGSASASGGEMSSSEPSTPAQTPLVAPVIPSPSLTSPVAPMVPSPTKEEE 211
Query: 527 --YAGILSDDTSLEHLVPQDKRDEIILKLIPRVRELHNQLHEWTEWANQKVMQAARRLSK 584
+ + + LE L + D+ LK + + + Q+ EW ++ RRL +
Sbjct: 212 NLRSQVRDLEEKLETLKIKRNEDKAKLKELEKYKIQLEQVQEWKSKMQEQQADLQRRLKE 271
Query: 585 DKAELKTLRQEKEE-VERLKKEKQILEENTMKKLSEMENALCKASGQ-VERANSAVRRLE 642
K E K + KE +E + +E T+ K EM ++ Q V+ V L
Sbjct: 272 AKKEAKDALEAKERYMEEMADTADAIEMATLDK--EMAEERAESLQQEVDSLKEKVEYLT 329
Query: 643 VENTALRQEMEAAKLRAAESAASCQEVSKREKKTQMKFQSWEKQKALFQEELV------- 695
++ L+ E+E + ++ AAS +V + E+Q A +E LV
Sbjct: 330 MDLEILKHEIEE---KGSDGAASSYQVKQ-----------LEEQNARLKEALVRMRDLSA 375
Query: 696 TEKRKVVQLLQ-------ELDQAKALQEQLEARWRQEEKAKEELVMQASSIRKEREQIEA 748
+EK++ V+L + EL+ + +E+L+ +Q EK +EL +EQ++A
Sbjct: 376 SEKQEHVKLQKQMEKKNTELESLRQQREKLQEEVKQAEKTVDEL----------KEQVDA 425
Query: 749 SAKSKEDMIKSKAETNLMRYKDDIHRLEKEISQLR 783
A E+M+++ E NL LE+++ +LR
Sbjct: 426 -ALGAEEMVETLTERNL--------DLEEKVRELR 451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 320,600,416
Number of Sequences: 539616
Number of extensions: 13814297
Number of successful extensions: 75968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 3121
Number of HSP's that attempted gapping in prelim test: 55547
Number of HSP's gapped (non-prelim): 13127
length of query: 899
length of database: 191,569,459
effective HSP length: 127
effective length of query: 772
effective length of database: 123,038,227
effective search space: 94985511244
effective search space used: 94985511244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)