BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002629
         (898 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6H6V4|ARFF_ORYSJ Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6
           PE=1 SV=1
          Length = 908

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/902 (66%), Positives = 695/902 (77%), Gaps = 35/902 (3%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 75
           E+KCLNSELWHACAGPLVSLP VGSRVVYFPQGHSEQVAASTNKE+++ IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTAS 135
           ICQLHN+TMHAD ETDEVYAQMTLQPLSPQE KD +L PAELG  +KQPTNYFCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFL-PAELGTASKQPTNYFCKTLTAS 141

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSVPRRAAEKVFPPLD++Q PPAQEL+A+DLH NEWKFRHIFRGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RPQTVMPSSVLSSDSMHIGLLAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HAA+TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFPLRLK
Sbjct: 322 TITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 381

Query: 376 RPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPG 435
           RPWP+GLPS +G K+ D++  S LMWL+    + G QSLNF G G++PWMQPRLD+S+ G
Sbjct: 382 RPWPTGLPSLYGGKEDDLA--SSLMWLRDS-QNTGFQSLNFGGLGMSPWMQPRLDSSLLG 438

Query: 436 LQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQMLQQSQAQNA 495
           LQPD+YQ +AAAA  +    +++K  S ++LQFQQ QN+  G +S++  Q+LQQ+Q Q  
Sbjct: 439 LQPDMYQTIAAAAALQ----NTTKQVSPAMLQFQQPQNIV-GRSSLLSSQILQQAQPQFQ 493

Query: 496 LL--QSFQEN--QASAQAQLLQQQLQRQHSYNE-------------QRQQQQQVQQSQQL 538
            +  Q+   N  Q  +Q + LQQ LQ   S+NE               QQQ Q QQ QQ 
Sbjct: 494 QMYHQNINGNSIQGHSQPEYLQQPLQHCQSFNEQKPQLQPQQQQQESHQQQPQHQQMQQQ 553

Query: 539 HQLSVQPQISNVISTLPHLASSSQSQPPTLQTVASQCQQSNFSDSLGNPIASSDVSSMHT 598
             LS    + N +S    L+S+ QS P TLQTV+   QQ NF D+  + ++ S+VSSMH 
Sbjct: 554 KHLSNFQTVPNALSVFSQLSSTPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVSSMHD 613

Query: 599 ILGSLSQAGASHLLNSNASNPIISSSAMLTKQVTVDNHVPSAVSHCILPQVEQLGAQQSN 658
            L S     AS L       P+  S    +K+V V++ + S   H I  Q+E      S+
Sbjct: 614 TLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITSR-PHDISSQIENFDLTPSS 672

Query: 659 VSELASLLPPFPGRE-YSSYHGSGDPQNNLLFGVSIDS-SLMGQNGLPNLKNISSENESL 716
           + +  S L P PGRE      GS DPQN+ LFGV+IDS SL+ Q+G+P+L N   EN S 
Sbjct: 673 IPQ-NSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHN---ENSSS 728

Query: 717 SLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGSF 776
           ++PY+ SNF +    D+PL+  +TT  C+DESG++  S+N DQV  P  TFVKV+KSG+ 
Sbjct: 729 TIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKSGTV 788

Query: 777 GRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFV 836
           GR LDI++FSSY ELRSE+ R+FGLEGQLEDP RSGWQLVFVDRE+DVLL+GDDPWQEFV
Sbjct: 789 GRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFV 848

Query: 837 NNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELRSSSNGVASMGSI 896
           N+V  IKILSP EVQQMGK    + S   +RL   N+ D+Y+SRQE RS S G+AS+GS+
Sbjct: 849 NSVSCIKILSPQEVQQMGKPGIELFSTSARRL--GNSCDNYMSRQESRSLSTGIASVGSV 906

Query: 897 NY 898
            +
Sbjct: 907 EF 908


>sp|A2X1A1|ARFF_ORYSI Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2
           SV=1
          Length = 908

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/902 (66%), Positives = 695/902 (77%), Gaps = 35/902 (3%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 75
           E+KCLNSELWHACAGPLVSLP VGSRVVYFPQGHSEQVAASTNKE+++ IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTAS 135
           ICQLHN+TMHAD ETDEVYAQMTLQPLSPQE KD +L PAELG  +KQPTNYFCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFL-PAELGTASKQPTNYFCKTLTAS 141

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSVPRRAAEKVFPPLD++Q PPAQEL+A+DLH NEWKFRHIFRGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RPQTVMPSSVLSSDSMHIGLLAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HAA+TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFPLRLK
Sbjct: 322 TITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 381

Query: 376 RPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPG 435
           RPWP+GLPS +G K+ D++  S LMWL+    + G QSLNF G G++PWMQPRLD+S+ G
Sbjct: 382 RPWPTGLPSLYGGKEDDLA--SSLMWLRDS-QNTGFQSLNFGGLGMSPWMQPRLDSSLLG 438

Query: 436 LQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQMLQQSQAQNA 495
           LQPD+YQ +AAAA  +    +++K  S ++LQFQQ QN+  G +S++  Q+LQQ+Q Q  
Sbjct: 439 LQPDMYQTIAAAAALQ----NTTKQVSPAMLQFQQPQNIV-GRSSLLSSQILQQAQPQFQ 493

Query: 496 LL--QSFQEN--QASAQAQLLQQQLQRQHSYNE-------------QRQQQQQVQQSQQL 538
            +  Q+   N  Q  +Q + LQQ LQ   S+NE               QQQ Q QQ QQ 
Sbjct: 494 QMYHQNINGNSIQGHSQPEYLQQPLQHCQSFNEQKPQLQPQQQQQESHQQQPQHQQMQQQ 553

Query: 539 HQLSVQPQISNVISTLPHLASSSQSQPPTLQTVASQCQQSNFSDSLGNPIASSDVSSMHT 598
             LS    + N +S    L+S+ QS P TLQTV+   QQ NF D+  + ++ S+VSSMH 
Sbjct: 554 KHLSNFQTVPNALSVFSQLSSTPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVSSMHD 613

Query: 599 ILGSLSQAGASHLLNSNASNPIISSSAMLTKQVTVDNHVPSAVSHCILPQVEQLGAQQSN 658
            L S     AS L       P+  S    +K+V V++ + S   H I  Q+E      S+
Sbjct: 614 TLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITSR-PHDISSQIENFDLTPSS 672

Query: 659 VSELASLLPPFPGRE-YSSYHGSGDPQNNLLFGVSIDS-SLMGQNGLPNLKNISSENESL 716
           + +  S L P PGRE      GS DPQN+ LFGV+IDS SL+ Q+G+P+L N   EN S 
Sbjct: 673 IPQ-NSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHN---ENSSS 728

Query: 717 SLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGSF 776
           ++PY+ SNF +    D+PL+  +TT  C+DESG++  S+N DQV  P  TFVKV+KSG+ 
Sbjct: 729 TIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKSGTV 788

Query: 777 GRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFV 836
           GR LDI++FSSY ELRSE+ R+FGLEGQLEDP RSGWQLVFVDRE+DVLL+GDDPWQEFV
Sbjct: 789 GRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFV 848

Query: 837 NNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELRSSSNGVASMGSI 896
           N+V  IKILSP EVQQMGK    + S   +RL   N+ D+Y+SRQE RS S G+AS+GS+
Sbjct: 849 NSVSCIKILSPQEVQQMGKPGIELFSTSARRL--GNSCDNYMSRQESRSLSTGIASVGSV 906

Query: 897 NY 898
            +
Sbjct: 907 EF 908


>sp|A2YG67|ARFQ_ORYSI Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17
           PE=2 SV=1
          Length = 917

 Score = 1096 bits (2834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/914 (64%), Positives = 697/914 (76%), Gaps = 50/914 (5%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 75
           E+KCLNSELWHACAGPLVSLP VGSRVVYFPQGHSEQVAASTNKE+++ IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTAS 135
           ICQLHN+TMHAD ETDEVYAQMTLQPLSPQE KD YL PAELG+ NKQPTNYFCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYL-PAELGSANKQPTNYFCKTLTAS 141

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSVPRRAAEKVFPPLD++Q PPAQELIA+DLH NEWKFRHIFRGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RPQTVMPSSVLSSDSMHIGLLAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HAA+TNSRFTIFYNPRASPSEFVIPL+KYVKAVYHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFPLRLK
Sbjct: 322 TITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 381

Query: 376 RPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPG 435
           RPWP+GLPS HG KD D++  S LMWL+    + G QSLNF G G+ PWMQPR DAS+ G
Sbjct: 382 RPWPTGLPSLHGGKDDDLT--SSLMWLRDS-ANPGFQSLNFGGLGMNPWMQPRFDASLLG 438

Query: 436 LQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQML---QQSQA 492
           LQPD+YQ +AA A Q     D +K  S ++LQFQQ QN+     +++P Q+L   Q    
Sbjct: 439 LQPDMYQTIAATAFQ-----DPTKQVSPTILQFQQPQNIGGRANTLLPSQILQQVQPQFQ 493

Query: 493 QNALLQSFQEN--QASAQAQLLQQQLQRQHSYNE----------------------QRQQ 528
           Q   LQ+  E   Q  AQ++ LQQQLQR  S+ E                      Q  Q
Sbjct: 494 QQQYLQNINETTIQGHAQSEFLQQQLQRCQSFTEQKPQLQTQQQQQESQQQQQQQSQCMQ 553

Query: 529 QQQVQQSQQLHQLSVQPQISNVISTLPHLASSSQSQPPTLQTVASQCQQSNFSDSLGNPI 588
             Q QQ QQ   ++    + N +S    L+S SQS P TLQTV    Q  ++ D+  + +
Sbjct: 554 VPQHQQMQQQKNMTNYQSVPNALSPFSQLSSPSQSSPMTLQTVLPFSQPQSYPDTSMSSL 613

Query: 589 ASSDVSSMHTILGSLSQAGASHL-LNSNASNPIISSSAMLTKQVTVDNHVPSAVSHCILP 647
           + S+ S+MH  L   S    SHL +    + P+    +  +K+V V++ +PS     +  
Sbjct: 614 SPSNTSTMHNALRPFSSEAPSHLSMPRPTAVPVPDPWS--SKRVAVESLLPSRPQ--VTS 669

Query: 648 QVEQLGAQQSNVSELASLLPPFPGRE-YSSYHGSGDPQNNLLFGVSIDS-SLMGQNGLPN 705
           Q+EQL +   ++ + +S L P PGR       G+ DPQN+LLFGV+IDS SL+ Q G+P+
Sbjct: 670 QMEQLDSTAPSIPQ-SSALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSLLMQGGIPS 728

Query: 706 LKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQV-NPPT 764
           L+    EN+S ++PY+ SNF + +  DFPL+  ++++ C+DESG++  S+N DQV N P 
Sbjct: 729 LQG---ENDSTAIPYSTSNFLSPLQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPP 785

Query: 765 RTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 824
            TFVKV+KSG++GRSLDI++FSSY ELR EL R+FGLEGQLE+P RSGWQLVFVDRE+DV
Sbjct: 786 ATFVKVYKSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDV 845

Query: 825 LLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELR 884
           LL+GDDPWQEFVN+V  IKILSP EVQQMGK    ++S PG+RL S  + DDYVSRQE R
Sbjct: 846 LLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPFELLSSAPGKRLGS--SCDDYVSRQESR 903

Query: 885 SSSNGVASMGSINY 898
           S S G+AS+GS+ +
Sbjct: 904 SLSTGIASVGSVEF 917


>sp|Q653U3|ARFQ_ORYSJ Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17
           PE=2 SV=1
          Length = 917

 Score = 1095 bits (2831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/914 (64%), Positives = 696/914 (76%), Gaps = 50/914 (5%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 75
           E+KCLNSELWHACAGPLVSLP VGSRVVYFPQGHSEQVAASTNKE+++ IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTAS 135
           ICQLHN+TMHAD ETDEVYAQMTLQPLSPQE KD YL PAELG+ NKQPTNYFCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYL-PAELGSANKQPTNYFCKTLTAS 141

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSVPRRAAEKVFPPLD++Q PPAQELIA+DLH NEWKFRHIFRGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RPQTVMPSSVLSSDSMHIGLLAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HAA+TNSRFTIFYNPRASPSEFVIPL+KYVKAVYHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFPLRLK
Sbjct: 322 TITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 381

Query: 376 RPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPG 435
           RPWP+GLPS HG KD D++  S LMWL+    + G QSLNF G G+ PWMQPR DAS+ G
Sbjct: 382 RPWPTGLPSLHGGKDDDLT--SSLMWLRDS-ANPGFQSLNFGGLGMNPWMQPRFDASLLG 438

Query: 436 LQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQML---QQSQA 492
           LQPD+YQ +AA A Q     D +K  S ++LQFQQ QN+     +++P Q+L   Q    
Sbjct: 439 LQPDMYQTIAATAFQ-----DPTKQVSPTILQFQQPQNIGGRANTLLPSQILQQVQPQFQ 493

Query: 493 QNALLQSFQEN--QASAQAQLLQQQLQRQHSYNE----------------------QRQQ 528
           Q   LQ+  E   Q  AQ++ LQQQLQR  S+ E                      Q  Q
Sbjct: 494 QQQYLQNINETTIQGHAQSEFLQQQLQRCQSFTEQKPQLQTQQQQQESQQQQQQQSQCMQ 553

Query: 529 QQQVQQSQQLHQLSVQPQISNVISTLPHLASSSQSQPPTLQTVASQCQQSNFSDSLGNPI 588
             Q QQ QQ   ++    + N +S    L+S SQS P TLQTV    Q  ++ D+  + +
Sbjct: 554 VPQHQQMQQQKNMTNYQSVPNALSPFSQLSSPSQSSPMTLQTVLPFSQPQSYPDTSMSSL 613

Query: 589 ASSDVSSMHTILGSLSQAGASHL-LNSNASNPIISSSAMLTKQVTVDNHVPSAVSHCILP 647
           + S+ S+MH  L   S    SHL +    + P+    +  +K+V V++ +PS     +  
Sbjct: 614 SPSNTSTMHNALRPFSSEAPSHLSMPRPTAVPVPDPWS--SKRVAVESLLPSRPQ--VTS 669

Query: 648 QVEQLGAQQSNVSELASLLPPFPGRE-YSSYHGSGDPQNNLLFGVSIDS-SLMGQNGLPN 705
           Q+EQL +   ++ + +S L P PGR       G+ DPQN+LLFGV+IDS SL+ Q G+P+
Sbjct: 670 QMEQLDSTAPSIPQ-SSALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSLLMQGGIPS 728

Query: 706 LKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQV-NPPT 764
           L+    EN+S ++PY+ SNF +    DFPL+  ++++ C+DESG++  S+N DQV N P 
Sbjct: 729 LQG---ENDSTAIPYSTSNFLSPSQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPP 785

Query: 765 RTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 824
            TFVKV+KSG++GRSLDI++FSSY ELR EL R+FGLEGQLE+P RSGWQLVFVDRE+DV
Sbjct: 786 ATFVKVYKSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDV 845

Query: 825 LLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELR 884
           LL+GDDPWQEFVN+V  IKILSP EVQQMGK    ++S PG+RL S  + DDYVSRQE R
Sbjct: 846 LLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPFELLSSAPGKRLGS--SCDDYVSRQESR 903

Query: 885 SSSNGVASMGSINY 898
           S S G+AS+GS+ +
Sbjct: 904 SLSTGIASVGSVEF 917


>sp|Q2QM84|ARFY_ORYSJ Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25
           PE=2 SV=1
          Length = 899

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/904 (60%), Positives = 656/904 (72%), Gaps = 42/904 (4%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +GE++CLNSELWHACAGPLVSLP V SRVVYFPQGHSEQVAASTNKEVDA IPNYPNLPP
Sbjct: 19  DGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPP 78

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           QLICQLHN+TMHAD ETDEVYAQMTLQPLSP+EQK+ +L P ELGA +KQPTNYFCKTLT
Sbjct: 79  QLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFL-PMELGAASKQPTNYFCKTLT 137

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTSTHGGFSVPRRAAEKVFPPLD+SQ PPAQELIARDLHDNEWKFRHIFRGQPKRHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           TTGWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R QTVMPSSVLSSDSMHIGLLAA
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLR 373
           MGTIT ISDLD VRWPNSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMY S FPLR
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLR 377

Query: 374 LKRPWPSGLPSFHGMKDG----DMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRL 429
           LKRPW SGLP  HGM +G    D +  S LMWL+   G++G QSLNFQG+GV+PW+QPR+
Sbjct: 378 LKRPWASGLP-MHGMFNGGGNDDFARYSSLMWLRD--GNRGTQSLNFQGHGVSPWLQPRI 434

Query: 430 DASIPGLQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQMLQQ 489
           D+ + GL+PD YQ MAAAAL+E+R  D SK    + LQ+QQ+ N+++G  S+    +L Q
Sbjct: 435 DSPLLGLKPDTYQQMAAAALEEIRYGDPSK-QHPATLQYQQTHNLNSGLNSLFASHVLGQ 493

Query: 490 S--QAQNALLQSFQEN--QASAQAQLLQQQLQRQHSYNEQRQQQQQVQQSQQLHQLSVQP 545
              Q Q + LQ  Q+   Q +  +  LQ QL R   +N Q+  ++Q  Q QQ   +  + 
Sbjct: 494 VQFQPQQSPLQVVQQGHCQNTGDSGFLQGQLPRLQLHNTQQLLKEQELQQQQRQHVLQEQ 553

Query: 546 QISNVISTLP-------HLASSSQSQPPTLQTVASQCQQSNFSDSLGNPIASSDVSSMHT 598
               +   LP        +AS S S P    ++ S     N +   GN   S     +H 
Sbjct: 554 SSQEMQQQLPSSDHHVADVASESGSAPQAQSSLLSGSSFYNQNLLEGN---SDPPLHLHN 610

Query: 599 ILGSLSQAGASHLLNSNASNPIISSSAMLTKQVTVDNHV-PSAVSHCILPQVEQLGAQQS 657
              + S   AS+LL    S+ +++S    +K++T+++ V P A S  + P++E++  Q  
Sbjct: 611 NFHNFSNQEASNLLILPRSSQLMASDGWPSKRLTLESAVHPEAPS--MHPKIEKVNHQ-- 666

Query: 658 NVSELASLLPPFPGREYSSYHGS-GDPQNNLLFGVSIDSSLMGQNGLPN-LKNISSENES 715
            +S      PP   R  S       D +N LL      SS   Q+G+ + + + + E ++
Sbjct: 667 GISHFPGAFPPQSARGCSIVQDCRADAENRLL-----SSSFELQDGMTSIITDANRETDT 721

Query: 716 LSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPT-RTFVKVHKSG 774
           +++P          G D    + + TS+C+ ESG      N+  VNP    TFVKV+KSG
Sbjct: 722 MAIP-----LLRYSGADLTTENTLATSNCLGESGTFNPLNNIS-VNPSQGATFVKVYKSG 775

Query: 775 SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQE 834
           S GRSLDIS+FSSY ELRSEL R+FGLEGQLEDP RSGWQLVFVDREND+LL+GDDPWQE
Sbjct: 776 SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQE 835

Query: 835 FVNNVGYIKILSPLEVQQMGKGLSPVTSGPGQRLSSNNNFDDYVSRQELRSSSNGVASMG 894
           F N+V  IKILSP EVQQ+ +G   + S PG R+  +N  DDY +   +++ +  +AS+ 
Sbjct: 836 FANSVWCIKILSPQEVQQLVRGGDGLLSSPGARMQQSNACDDYSASHNMQNIAGNIASVA 895

Query: 895 SINY 898
            ++Y
Sbjct: 896 PLDY 899


>sp|Q9FGV1|ARFH_ARATH Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2
          Length = 811

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/863 (58%), Positives = 594/863 (68%), Gaps = 78/863 (9%)

Query: 1   MRLATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE 60
           M+L+TSG  QQ  EGEK CLNSELWHACAGPLVSLP  GSRVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MKLSTSGLGQQGHEGEK-CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP 120
           VD HIPNYP+LPPQLICQLHN+TMHADVETDEVYAQMTLQPL+P+EQK+ ++ P ELG P
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFV-PIELGIP 118

Query: 121 NKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKF 180
           +KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDY+  PPAQELIARDLHD EWKF
Sbjct: 119 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 178

Query: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSV 240
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR ATRPQT++PSSV
Sbjct: 179 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSV 238

Query: 241 LSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFR 300
           LSSDSMHIGLLAAAAHA+ATNS FT+F++PRAS SEFVI L+KY+KAV+HTR+SVGMRFR
Sbjct: 239 LSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFR 298

Query: 301 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
           MLFETEESSVRRYMGTITGISDLD VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 299 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358

Query: 361 TTFPMYSSPFPLRLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQS-LNFQGY 419
           TTFPMY S FPLRLKRPW +G  S   + DG   + S L WL+GG G+Q     LN+   
Sbjct: 359 TTFPMYPSLFPLRLKRPWHAGTSS---LPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSV 415

Query: 420 GVTPWMQPRLDASIPGLQPD-VYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGT 478
           G+ PWMQ RLD S  G   +  YQAM AA LQ +   D  +   Q  +Q Q+  +     
Sbjct: 416 GLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLR---QQFVQLQEPHH----- 467

Query: 479 ASMIPRQMLQQSQAQNALLQSFQENQASAQAQLLQQQLQRQHSYNEQRQQQQQVQQSQQL 538
                 Q LQQS + N+ L   Q+ Q  A   L+  Q Q       Q+  +Q+V      
Sbjct: 468 ------QYLQQSASHNSDLMLQQQQQQQASRHLMHAQTQIMSENLPQQNMRQEVSNQPAG 521

Query: 539 HQLSVQPQISNVISTLPHLASSSQSQPPTLQTVASQCQ-------QSNFSDSLGNPIASS 591
            Q  +Q    N         ++ + Q   LQ    Q +       +S+F+DS  N  A++
Sbjct: 522 QQQQLQQPDQNAY------LNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDS-SNKFATT 574

Query: 592 DVSSMHTILGSLSQAGASHLLNSNASNPIISSSAMLTKQVTVDNHVPSAVSHCILPQVEQ 651
              +          +G  +LLN +     I+  ++L +Q+T +   P A           
Sbjct: 575 ASPA----------SGDGNLLNFS-----ITGQSVLPEQLTTEGWSPKA----------- 608

Query: 652 LGAQQSNVSELASLLPPFPGREYSSYHGSGDPQNNLLFGVSIDSSLMGQNGLPNLKNISS 711
                +  SE  SL   +PG+  +     G+PQN  LFGV  DS L   + +P   + S 
Sbjct: 609 ----SNTFSEPLSLPQAYPGKSLALE--PGNPQNPSLFGVDPDSGLFLPSTVPRFASSSG 662

Query: 712 ENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPTRTFVKVH 771
           + E+  +    S F N++   +    D TT   +  +G + SS         T+ FVKV+
Sbjct: 663 DAEASPMSLTDSGFQNSL---YSCMQD-TTHELLHGAGQINSSNQ-------TKNFVKVY 711

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDP 831
           KSGS GRSLDIS+FSSY ELR EL +MF +EG LEDP RSGWQLVFVD+END+LLLGDDP
Sbjct: 712 KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDP 771

Query: 832 WQEFVNNVGYIKILSPLEVQQMG 854
           W+ FVNNV YIKILSP +V QMG
Sbjct: 772 WESFVNNVWYIKILSPEDVHQMG 794


>sp|Q9ZTX8|ARFF_ARATH Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=1 SV=2
          Length = 935

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/491 (85%), Positives = 445/491 (90%), Gaps = 13/491 (2%)

Query: 1   MRLATSGFNQQTQE--GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 58
           MRL+++GFN Q  E  GEK+ LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELG 118
           KEVDAHIPNYP+L PQLICQLHN+TMHADVETDEVYAQMTLQPL+ QEQKD YL PAELG
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYL-PAELG 119

Query: 119 APNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEW 178
            P++QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQ PPAQEL+ARDLHDNEW
Sbjct: 120 VPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEW 179

Query: 179 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPS 238
           KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RPQTVMPS
Sbjct: 180 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPS 239

Query: 239 SVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR 298
           SVLSSDSMH+GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR
Sbjct: 240 SVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMR 299

Query: 299 FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
           FRMLFETEESSVRRYMGTITGI DLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIE
Sbjct: 300 FRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIE 359

Query: 359 PLTTFPMYSSPFPLRLKRPWPSGLPSFHGMKDGD--MSINSPLMWLQGGVGDQGIQSLNF 416
           PLTTFPMY SPFPLRLKRPWP GLPSFHG+K+ D  MS++SPLMW      D+G+QSLNF
Sbjct: 360 PLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNF 413

Query: 417 QGYGVTPWMQPRLDAS-IPGLQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVS 475
           QG GV PWMQPRLD S + G+Q DVYQAMAAAALQ+MR +D +K A+ SLLQFQ S   S
Sbjct: 414 QGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDPAK-AAASLLQFQNSPGFS 472

Query: 476 NGTASMIPRQM 486
             + S++  QM
Sbjct: 473 MQSPSLVQPQM 483


>sp|Q0J951|ARFL_ORYSJ Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12
           PE=2 SV=1
          Length = 818

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/425 (82%), Positives = 376/425 (88%), Gaps = 8/425 (1%)

Query: 17  KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLI 76
           KKCLNSELWHACAGPLV LP VG+RVVYFPQGHSEQVAASTNKEV+ HIPNYPNLP QLI
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 77  CQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASD 136
           CQLH++TMHADVETDEVYAQMTLQPL+PQEQ D YL PAE+G  +KQPTNYFCKTLTASD
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYL-PAEMGIMSKQPTNYFCKTLTASD 143

Query: 137 TSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 196
           TSTHGGFSVPRRAAE+VFPPLD++Q PPAQELIARD+HD EWKFRHIFRGQPKRHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 203

Query: 197 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAH 256
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA+RPQTVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 204 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 263

Query: 257 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 316
           AAATNSRFTIFYNPRASPSEFVIPL+KY+KAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 264 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 323

Query: 317 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLKR 376
           IT +SD DPVRWP+S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMY S FPLR+K 
Sbjct: 324 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 383

Query: 377 PWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPGL 436
           PW SG+ S H   +        LMWL+G  G+ G QSLNFQ  G+  W Q RL  S+   
Sbjct: 384 PWYSGVASLHDDSNA-------LMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSS 436

Query: 437 QPDVY 441
             D Y
Sbjct: 437 DHDQY 441


>sp|P93024|ARFE_ARATH Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3
          Length = 902

 Score =  599 bits (1544), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 387/898 (43%), Positives = 511/898 (56%), Gaps = 108/898 (12%)

Query: 11  QTQEGEKK-CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYP 69
           + Q G +K  +NSELWHACAGPLV LP VGS V YF QGHSEQVA ST +     +PNYP
Sbjct: 41  KDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYP 100

Query: 70  NLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA--PNKQPTNY 127
           NLP QL+CQ+HN+T+HAD ++DE+YAQM+LQP+    ++DV+ +P + G    +K PT +
Sbjct: 101 NLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPV--HSERDVFPVP-DFGMLRGSKHPTEF 157

Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQ 187
           FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDYS  PP QEL+ RDLH+N W FRHI+RGQ
Sbjct: 158 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQ 217

Query: 188 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMH 247
           PKRHLLTTGWS+FV +KRL AGDSVLFI +EK+QL++G+RRA R QT +PSSVLS+DSMH
Sbjct: 218 PKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMH 277

Query: 248 IGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 307
           IG+LAAAAHA A  + F IFYNPRA P+EFVIPLAKY KA+  +++SVGMRF M+FETE+
Sbjct: 278 IGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETED 337

Query: 308 SSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTFP 364
           S  RRYMGTI GISDLDP+RWP S WR+++V WDE    ++  RVS W+IE    L  FP
Sbjct: 338 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFP 397

Query: 365 MYSSPFPLRLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPW 424
             +S    +L   +      F G  +    I  PL+ +                 G+ P+
Sbjct: 398 SLTSGLKRQLHPSY------FAGETEWGSLIKRPLIRVPDSAN------------GIMPY 439

Query: 425 MQPRLDASIPGLQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMI-- 482
                 AS P        +MA+  L +M     +     S +   Q QN+  G   ++  
Sbjct: 440 ------ASFP--------SMASEQLMKMMMRPHNNQNVPSFMSEMQ-QNIVMGNGGLLGD 484

Query: 483 -----PRQMLQQS---QAQNALLQSFQENQASAQAQLLQQQL-----------------Q 517
                P  M Q+S   Q QN L  +   +  S Q Q L Q +                 +
Sbjct: 485 MKMQQPLMMNQKSEMVQPQNKLTVNPSASNTSGQEQNLSQSMSAPAKPENSTLSGCSSGR 544

Query: 518 RQHSYNEQRQQQQQVQQS-----QQLHQLSVQPQISNVISTLPHLASSSQSQPPTLQTVA 572
            QH   +  +Q  QV  S     ++++QL  +P  S+ +        + Q    T Q   
Sbjct: 545 VQHGLEQSMEQASQVTTSTVCNEEKVNQLLQKPGASSPV-------QADQCLDITHQIYQ 597

Query: 573 SQCQQSNFSDSLGNPIASSDVSSMHTILGSLSQAGASHLLNSNASNPII---SSSAMLTK 629
            Q    N    L     +S VSS  ++ GS  Q     +L+S  S+ ++   S+++ L  
Sbjct: 598 PQSDPINGFSFLETDELTSQVSSFQSLAGSYKQP---FILSSQDSSAVVLPDSTNSPLFH 654

Query: 630 QVTVDNHVPSAVSHCILPQVEQ-LGAQQ----SNVSELASLLPPFPGREYSSYHGSGDPQ 684
            V  D  +         P ++Q L A Q    SN +    L PP        +    D  
Sbjct: 655 DVW-DTQLNGLKFDQFSPLMQQDLYASQNICMSNSTTSNILDPPLSNTVLDDFCAIKDTD 713

Query: 685 NNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSC 744
               F       L+G N     +++ S+  S S   + + F+     DFP NS  T +S 
Sbjct: 714 ----FQNHPSGCLVGNNNTSFAQDVQSQITSASFADSQA-FSRQ---DFPDNSGGTGTSS 765

Query: 745 ----VDESGFLQSSENVDQ---VNPPTRTFVKVHKSGSFGRSLDISKFSSYDELRSELAR 797
                D+    Q+S+         P  RT+ KV K+GS GRS+D++ F  Y+EL+S +  
Sbjct: 766 SNVDFDDCSLRQNSKGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIEC 825

Query: 798 MFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGK 855
           MFGLEG L  PQ SGW+LV+VD E+DVLL+GDDPW+EFV  V  I+ILSP EVQQM +
Sbjct: 826 MFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSE 883


>sp|A3B9A0|ARFP_ORYSJ Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16
           PE=2 SV=1
          Length = 1055

 Score =  560 bits (1442), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 312/503 (62%), Positives = 372/503 (73%), Gaps = 35/503 (6%)

Query: 4   ATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDA 63
            +SG +    EGEKK +NSELWHACAGPLVSLPPVGS VVYFPQGHSEQVAAS +KE+D 
Sbjct: 5   GSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD- 63

Query: 64  HIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP-NK 122
           +IP YP+LP +LIC+L +LT+HAD ETDEVYAQMTLQP++  ++    +L +ELG   NK
Sbjct: 64  NIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRD--AMLASELGLKQNK 121

Query: 123 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRH 182
           QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD++  PPAQELIA+DLHD  WKFRH
Sbjct: 122 QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRH 181

Query: 183 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS 242
           I+RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRATRPQ  + SSVLS
Sbjct: 182 IYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLS 241

Query: 243 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRML 302
           SDSMHIG+LAAAAHAAA +S FTIFYNPRASPSEFVIPLAKY KA+Y T+VS+GMRFRML
Sbjct: 242 SDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRML 300

Query: 303 FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 362
           FETE+S VRRYMGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T
Sbjct: 301 FETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT 360

Query: 363 FPMYSSPFPLRLKRPWPSGLPSFHGMKDGDMSINSPLM----WLQGGVGDQGIQSLNFQG 418
            P Y  P P    RP    LP   GM D +  + S       WL      + +QS  F G
Sbjct: 361 -PFYICPPPFF--RP---KLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPG 414

Query: 419 YGVTPWMQPRLDASIPGLQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGT 478
             +  WM          +Q +     AA+   +   ++S+ LA Q ++          G+
Sbjct: 415 LSLVQWM---------AMQQNPQMLTAASQTVQSPYLNSNALAMQDVM----------GS 455

Query: 479 ASMIPRQMLQQSQAQNALLQSFQ 501
           ++  P + L  +QAQN +L + Q
Sbjct: 456 SNEDPTKRL-NTQAQNMVLPNLQ 477



 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 71/89 (79%)

Query: 765  RTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 824
            RTF KV K GS GRS+DI+++  YDELR +LA MFG++GQLEDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 825  LLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
            LL+GDDPW+EFV  V  IKILS  EVQQM
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQM 1028


>sp|A2YAA5|ARFP_ORYSI Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16
           PE=2 SV=1
          Length = 1055

 Score =  558 bits (1437), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 311/503 (61%), Positives = 371/503 (73%), Gaps = 35/503 (6%)

Query: 4   ATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDA 63
            +SG +    EGEKK +NSELWHACAGPLVSLPPVGS VVYFPQGHSEQVAAS +KE+D 
Sbjct: 5   GSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD- 63

Query: 64  HIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP-NK 122
           +IP YP+LP +LIC+L +LT+HAD ETDEVY QMTLQP++  ++    +L +ELG   NK
Sbjct: 64  NIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRD--AMLASELGLKQNK 121

Query: 123 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRH 182
           QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD++  PPAQELIA+DLHD  WKFRH
Sbjct: 122 QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRH 181

Query: 183 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS 242
           I+RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRATRPQ  + SSVLS
Sbjct: 182 IYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLS 241

Query: 243 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRML 302
           SDSMHIG+LAAAAHAAA +S FTIFYNPRASPSEFVIPLAKY KA+Y T+VS+GMRFRML
Sbjct: 242 SDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRML 300

Query: 303 FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 362
           FETE+S VRRYMGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T
Sbjct: 301 FETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT 360

Query: 363 FPMYSSPFPLRLKRPWPSGLPSFHGMKDGDMSINSPLM----WLQGGVGDQGIQSLNFQG 418
            P Y  P P    RP    LP   GM D +  + S       WL      + +QS  F G
Sbjct: 361 -PFYICPPPFF--RP---KLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPG 414

Query: 419 YGVTPWMQPRLDASIPGLQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGT 478
             +  WM          +Q +     AA+   +   ++S+ LA Q ++          G+
Sbjct: 415 LSLVQWM---------AMQQNPQMLTAASQTVQSPYLNSNALAMQDVM----------GS 455

Query: 479 ASMIPRQMLQQSQAQNALLQSFQ 501
           ++  P + L  +QAQN +L + Q
Sbjct: 456 SNEDPTKRL-NTQAQNMVLPNLQ 477



 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 71/89 (79%)

Query: 765  RTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 824
            RTF KV K GS GRS+DI+++  YDELR +LA MFG++GQLEDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 825  LLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
            LL+GDDPW+EFV  V  IKILS  EVQQM
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQM 1028


>sp|Q8RYC8|ARFS_ARATH Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2
          Length = 1086

 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 298/506 (58%), Positives = 369/506 (72%), Gaps = 21/506 (4%)

Query: 1   MRLATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE 60
           M+  ++GF   + EGEKK +NS+LWHACAGPLVSLPPVGS VVYFPQGHSEQVAAS  K+
Sbjct: 1   MKAPSNGFLPSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP 120
            D  IPNYPNLP +LIC LH++T+HAD ETDEVYAQMTLQP++  +++   LL +++G  
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDRE--ALLASDMGLK 117

Query: 121 -NKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWK 179
            N+QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+S  PPAQE++A+DLHD  W 
Sbjct: 118 LNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWT 177

Query: 180 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS 239
           FRHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R    + SS
Sbjct: 178 FRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSS 237

Query: 240 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 299
           V+SSDSMHIG+LAAAAHA A +S FTIF+NPRASPSEFV+PLAKY KA+Y  +VS+GMRF
Sbjct: 238 VISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRF 296

Query: 300 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359
           RM+FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP
Sbjct: 297 RMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEP 356

Query: 360 LTTFPMYSSPFP-LRLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQG 418
           + T P Y  P P  R K P   G+P      D + +    + W+    G +  QS  F G
Sbjct: 357 VIT-PFYICPPPFFRPKYPRQPGMPD--DELDMENAFKRAMPWMGEDFGMKDAQSSMFPG 413

Query: 419 YGVTPWMQPRLDASIPG-LQPDVYQAMAAAAL-QEMRTVDSSKLASQSLLQFQQSQNVSN 476
             +  WM  + +  + G   P +  A+++  L     + D SK     LL F QS N+S+
Sbjct: 414 LSLVQWMSMQQNNPLSGSATPQLPSALSSFNLPNNFASNDPSK-----LLNF-QSPNLSS 467

Query: 477 GTASM----IPRQMLQQSQAQNALLQ 498
             +          + QQ QAQ A+++
Sbjct: 468 ANSQFNKPNTVNHISQQMQAQPAMVK 493



 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 74/89 (83%)

Query: 765  RTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDV 824
            RT+ KV K GS GRS+D++++S YDELR +LARMFG+EGQLEDP  S W+LV+ D END+
Sbjct: 958  RTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDI 1017

Query: 825  LLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
            LL+GDDPW+EFVN V  IKILS +EVQQM
Sbjct: 1018 LLVGDDPWEEFVNCVQNIKILSSVEVQQM 1046


>sp|Q0D9R7|ARFS_ORYSJ Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19
           PE=2 SV=2
          Length = 1161

 Score =  527 bits (1357), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/368 (72%), Positives = 302/368 (82%), Gaps = 6/368 (1%)

Query: 14  EGEKK---CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPN 70
           EGEK     +NSELWHACAGPLVSLPP GS VVYFPQGHSEQVAAS  K+VDAH+P+YPN
Sbjct: 38  EGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPN 97

Query: 71  LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQP-TNYFC 129
           LP +LIC LHN+T+HAD ETDEVYAQMTLQP++   ++ + L  +EL     +P T +FC
Sbjct: 98  LPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQL--SELALKQARPQTEFFC 155

Query: 130 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPK 189
           KTLTASDTSTHGGFSVPRRAAEK+FPPLD+S  PPAQEL ARDLHDN W FRHI+RGQPK
Sbjct: 156 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPK 215

Query: 190 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIG 249
           RHLLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R  T + SSVLSSDSMHIG
Sbjct: 216 RHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIG 275

Query: 250 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 309
           +LAAAAHAAA NS FTIFYNPRASP+EFVIP AKY KAVY  ++S+GMRFRM+FETEE  
Sbjct: 276 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG 335

Query: 310 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSP 369
            RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+        P
Sbjct: 336 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPP 395

Query: 370 FPLRLKRP 377
                KRP
Sbjct: 396 PFFGAKRP 403



 Score =  139 bits (349), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/196 (44%), Positives = 116/196 (59%), Gaps = 35/196 (17%)

Query: 685  NNLLFGVSIDSSL-----MG-----QNGLPNLK---NISSE-NESLSLPYAA------SN 724
            NN LFG++ D  L     +G      NG+   K   +IS+E + S  +P  A      S 
Sbjct: 928  NNALFGINGDGPLGFPIGLGTDDFLSNGIDAAKYENHISTEIDNSYRIPKDAQQEISSSM 987

Query: 725  FTNNVG-TDFPLNSDMTTSSCVDESGFLQSSENVDQVNPPT------RTFVKVHKSGSFG 777
             + + G +D   NS     S +++ GFL  S       PP       RTF KV+K G+ G
Sbjct: 988  VSQSFGASDMAFNS---IDSTINDGGFLNRSSW-----PPAAPLKRMRTFTKVYKRGAVG 1039

Query: 778  RSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVN 837
            RS+D+S+FS YDEL+  LARMF +EGQLE+ QR GW+LV+ D E+D+LLLGDDPW+EFV 
Sbjct: 1040 RSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVG 1099

Query: 838  NVGYIKILSPLEVQQM 853
             V  I+ILSP EVQQM
Sbjct: 1100 CVKCIRILSPQEVQQM 1115


>sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21
           PE=2 SV=2
          Length = 1116

 Score =  525 bits (1353), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/477 (60%), Positives = 346/477 (72%), Gaps = 8/477 (1%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLVSLPP GS +VYFPQGHSEQVAAS  K+ DA IP+YPNLP +LIC L
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDV-YLLPAELGAPNKQP-TNYFCKTLTASDT 137
           H++TM AD +TDEVYA+MTLQP+S   Q D   LL +EL     +P T +FCKTLTASDT
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDT 141

Query: 138 STHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 197
           STHGGFSVPRRAAE++FP LD+S  PPAQEL ARDLHDN W FRHI+RGQPKRHLLTTGW
Sbjct: 142 STHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGW 201

Query: 198 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 257
           S+FVS KRL+AGDSVLFI + K QLLLGIRRA R  T + SSVLSSDSMHIG+LAAAAHA
Sbjct: 202 SLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHA 261

Query: 258 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 317
           AA NS+FTI+YNPRAS SEFVIP AKY KAVY  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 262 AANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 321

Query: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYSSPFPLRLKR 376
           TGISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +Y SP     KR
Sbjct: 322 TGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPL-FTAKR 380

Query: 377 PWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVTPWMQPRLDASIPG- 435
           P   G+       DG +    P +  +    D  IQ+    G  +  WM  +  +S+PG 
Sbjct: 381 PRLPGMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGT 440

Query: 436 -LQPDVYQAMAAAALQEMRTVDSSKLASQSLLQFQQSQNVSNGTASMIPRQMLQQSQ 491
            +QP++  +++   +Q +   D S+  S    QF Q  N+   TA ++P+Q  Q  Q
Sbjct: 441 VVQPELLNSLSGKPVQNLAAADLSRQISFH-PQFLQQNNIQFNTA-LVPQQNQQTEQ 495



 Score =  142 bits (359), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/193 (43%), Positives = 114/193 (59%), Gaps = 25/193 (12%)

Query: 682  DPQNNLLFGVSIDSSLMGQNGLPN-----LKNISSENESLSLP-YAASNFTNNVGTDFPL 735
            DP+NNLLFGV+ID    GQ GLP        +I ++     LP    SNF ++  +   L
Sbjct: 898  DPRNNLLFGVNID----GQLGLPLNADLLANDIGTDKYMDQLPGNGISNFISSKDSQQEL 953

Query: 736  NSDMTT-------------SSCVDESGFLQ--SSENVDQVNPPTRTFVKVHKSGSFGRSL 780
            +S M +              S ++++ FL   S       +   RT+ KVHK G+ GRS+
Sbjct: 954  SSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQRMRTYTKVHKRGAVGRSI 1013

Query: 781  DISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVG 840
            DI+++S YDEL+ ++ARMFG+EGQL D  R GW+LV+ D E DVLL+GDDPW++FV  V 
Sbjct: 1014 DINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVR 1073

Query: 841  YIKILSPLEVQQM 853
             I+ILSP E  QM
Sbjct: 1074 CIRILSPQEEMQM 1086


>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2
          Length = 1164

 Score =  525 bits (1352), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/471 (60%), Positives = 343/471 (72%), Gaps = 22/471 (4%)

Query: 4   ATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDA 63
           +++G +    EGE++ +NSELWHACAGPL+SLPP GS VVYFPQGHSEQVAAS  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP-NK 122
            IP+YPNLP +LIC LHN+T++AD ETDEVYAQMTLQP++  ++    LL +++G   N+
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRD--ALLASDMGLKLNR 121

Query: 123 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRH 182
           QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP LD+S  PP QEL+A+D+HDN W FRH
Sbjct: 122 QPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRH 181

Query: 183 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS 242
           I+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R Q  + SSV+S
Sbjct: 182 IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVIS 241

Query: 243 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRML 302
           SDSMHIG+LAAAAHA A NS FTIFYNPRA+P+EFV+PLAKY KA+Y  +VS+GMRFRM+
Sbjct: 242 SDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMI 300

Query: 303 FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 362
           FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T
Sbjct: 301 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 360

Query: 363 FPMYSSPFPLRLKRPWPSGLPSFHGMKDGDMSINSPLM----WLQGGVGDQGIQSLNFQG 418
            P Y  P P    RP  SG P   GM D +  + S L     WL   +  +   S  F G
Sbjct: 361 -PFYICPPPFF--RPRFSGQP---GMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPG 414

Query: 419 YGVTPWM-------QPRLDASIPGLQPDVYQAMAAAALQEMRTVDSSKLAS 462
             +  WM       Q    A+ PG  P +    AA       T D SKL S
Sbjct: 415 LSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLS 465



 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 112/185 (60%), Gaps = 15/185 (8%)

Query: 681  GDPQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMT 740
            GD +N+LL G ++D+  +    L   +   S+ +  ++       TN++GT+   ++  T
Sbjct: 944  GDSRNSLLGGANVDNGFVPDTLLS--RGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRT 1001

Query: 741  TSS------------CVDESGFLQSSENVDQVNPPTRTFVKVHKSGSFGRSLDISKFSSY 788
             S              V+++G L       Q     RT+ KV K GS GRS+D++++  Y
Sbjct: 1002 QSFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQR-MRTYTKVQKRGSVGRSIDVNRYRGY 1060

Query: 789  DELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPL 848
            DELR +LARMFG+EGQLEDPQ S W+LV+VD END+LL+GDDPW+EFVN V  IKILS  
Sbjct: 1061 DELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSA 1120

Query: 849  EVQQM 853
            EVQQM
Sbjct: 1121 EVQQM 1125


>sp|Q6Z2W3|ARFE_ORYSJ Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5
           PE=2 SV=2
          Length = 1142

 Score =  523 bits (1346), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 298/547 (54%), Positives = 373/547 (68%), Gaps = 42/547 (7%)

Query: 14  EGEKKC--LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNL 71
           EGE+K   +NSELWHACAGPLVSLPPVGS VVYFPQGHSEQVAAS  K+VDAH+P+YPNL
Sbjct: 33  EGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNL 92

Query: 72  PPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQP-TNYFCK 130
           P +LIC LH + +HAD +TDEVYAQMTLQP++   ++ + +  +EL     +P   +FCK
Sbjct: 93  PSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQI--SELALKQARPQMEFFCK 150

Query: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKR 190
           TLTASDTSTHGGFSVPRRAAEK+FPPLD+S  PPAQEL ARD+HDN W FRHI+RGQPKR
Sbjct: 151 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKR 210

Query: 191 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 250
           HLLTTGWS+FVS KRL AGDSV+ + +EK+QLLLGIRRA R  T + SSVLSSDSMHIG+
Sbjct: 211 HLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGV 270

Query: 251 LAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV 310
           LAAAAHAAA +S FTIFYNPRASP+EFVIP AKY KA+Y  ++S+GMRFRM+FETEE   
Sbjct: 271 LAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGT 330

Query: 311 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPF 370
           RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   P +  P 
Sbjct: 331 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA-PFFLCPQ 389

Query: 371 P-LRLKRPWPSGLPSFHGMKDGDMSINSPLMWLQGGVGDQGIQSLNFQ--GYGVTPWM-- 425
           P   +KRP            + +      + WL   V  +  Q+ N    G  +  WM  
Sbjct: 390 PFFGVKRPR-----QLDDESEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNM 444

Query: 426 --QPRLDASIPGLQPDVYQAMAAAALQEMRTVDSSK-------LASQSLLQF------QQ 470
             Q     +    Q +  QA+   A+Q +   + ++       L  Q+ +QF      QQ
Sbjct: 445 NRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQ 504

Query: 471 SQNVSNGTASMIPRQMLQ-----QSQAQNALLQSFQENQ------ASAQAQLLQQQLQRQ 519
            Q +++ + + IP   L      Q Q Q+A+    Q+N       + AQ+ L+Q Q+  Q
Sbjct: 505 MQTMNDLSKAAIPLNQLGAIINPQDQKQDAVNHQRQQNSIQVIPLSQAQSNLVQAQVIVQ 564

Query: 520 HSYNEQR 526
           +   +Q+
Sbjct: 565 NQMQQQK 571



 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 115/199 (57%), Gaps = 37/199 (18%)

Query: 682  DPQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAAS-NFTNNVGTD----FPLN 736
            DP N+ LFG++ D          NL     E E L +    S  + N++ TD    +P+ 
Sbjct: 909  DPSNSGLFGINND----------NLLGFPIETEDLLINALDSVKYQNHISTDVENNYPMQ 958

Query: 737  SD----MTTS-----------------SCVDESGFL-QSSENVDQVNPPTRTFVKVHKSG 774
             D    ++TS                 S +++  FL ++S     +    RTF KV+K G
Sbjct: 959  KDALQEISTSMVSQSFGQSDMAFNSIDSAINDGAFLNKNSWPAAPLLQRMRTFTKVYKRG 1018

Query: 775  SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQE 834
            + GRS+DI ++S Y+EL+  LARMFG+EGQLED QR GW+LV+ D E+D+LLLGDDPW+E
Sbjct: 1019 AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEE 1078

Query: 835  FVNNVGYIKILSPLEVQQM 853
            FVN V  I+ILSP EVQQM
Sbjct: 1079 FVNCVRCIRILSPQEVQQM 1097


>sp|Q8S983|ARFK_ORYSJ Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11
           PE=2 SV=1
          Length = 955

 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/347 (71%), Positives = 288/347 (82%), Gaps = 6/347 (1%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G KK +NSELWHACAGPLV LP  GS V YFPQGHSEQVAA+T K  ++ IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA--PNKQPTNYFCKT 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++   + DV+ +P  LGA   +K PT YFCK 
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVN--SETDVFPIPT-LGAYTKSKHPTEYFCKN 146

Query: 132 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 191
           LTASDTSTHGGFSVPRRAAEK+FP LDYS  PP QELI RDLHDN W FRHI+RGQPKRH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206

Query: 192 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLL 251
           LLTTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRATR QT++ SSVLS+DSMHIG+L
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVL 266

Query: 252 AAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 311
           AAAAHAA++ S FTI+YNPR SPS FVIP+A+Y KA Y  + SVGMRF M+FETEESS R
Sbjct: 267 AAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKR 325

Query: 312 RYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
           RY GT+ GISD DP+RWPNS WR+++V WDE   GER  RVS+W+IE
Sbjct: 326 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372



 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 17/153 (11%)

Query: 703 LPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNP 762
           LP LK    E++ LSLP   +N              M TS+C  ++       +   + P
Sbjct: 807 LPRLK----ESQILSLPEIHTN-------------SMGTSACSMDATEYSLDRSAKPMKP 849

Query: 763 PTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           P RT+ KV K GS GRS+D++ F +Y ELRS +A MFGL+G+LE P  S W+LV+VD EN
Sbjct: 850 PVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEN 909

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGK 855
           DVLL+GDDPW+EF+N V  I+ILSP EVQQM +
Sbjct: 910 DVLLVGDDPWEEFINCVRCIRILSPSEVQQMSE 942


>sp|Q01K26|ARFK_ORYSI Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11
           PE=2 SV=2
          Length = 955

 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/347 (71%), Positives = 288/347 (82%), Gaps = 6/347 (1%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G KK +NSELWHACAGPLV LP  GS V YFPQGHSEQVAA+T K  ++ IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA--PNKQPTNYFCKT 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++   + DV+ +P  LGA   +K PT YFCK 
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVN--SETDVFPIPT-LGAYTKSKHPTEYFCKN 146

Query: 132 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 191
           LTASDTSTHGGFSVPRRAAEK+FP LDYS  PP QELI RDLHDN W FRHI+RGQPKRH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206

Query: 192 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLL 251
           LLTTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRATR QT++ SSVLS+DSMHIG+L
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVL 266

Query: 252 AAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 311
           AAAAHAA++ S FTI+YNPR SPS FVIP+A+Y KA Y  + SVGMRF M+FETEESS R
Sbjct: 267 AAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKR 325

Query: 312 RYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
           RY GT+ GISD DP+RWPNS WR+++V WDE   GER  RVS+W+IE
Sbjct: 326 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372



 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 17/153 (11%)

Query: 703 LPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVNP 762
           LP LK    E++ LSLP   +N              M TS+C  ++       +   + P
Sbjct: 807 LPRLK----ESQILSLPEIHTN-------------SMGTSACSMDATEYSLDRSAKPMKP 849

Query: 763 PTRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           P RT+ KV K GS GRS+D++ F +Y ELRS +A MFGL+G+LE P  S W+LV+VD EN
Sbjct: 850 PVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEN 909

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGK 855
           DVLL+GDDPW+EF+N V  I+ILSP EVQQM +
Sbjct: 910 DVLLVGDDPWEEFINCVRCIRILSPSEVQQMSE 942


>sp|Q94JM3|ARFB_ARATH Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2
          Length = 859

 Score =  410 bits (1055), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/367 (54%), Positives = 265/367 (72%), Gaps = 5/367 (1%)

Query: 19  CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV ASTN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTS 138
           + N+ + A+ +TDEVYAQ+TL P + Q++  +    A L  P +   + FCKTLTASDTS
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEK-EAPLPPPPRFQVHSFCKTLTASDTS 174

Query: 139 THGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 198
           THGGFSV RR A++  PPLD S+ PP QEL+A+DLH NEW+FRHIFRGQP+RHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234

Query: 199 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 258
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294

Query: 259 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
           +T + FT++Y PR SPSEF++P  +Y+++V +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 295 STGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 353

Query: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPL-RLKRP 377
           GI + DP RWP S WRS+KV WDE+++  R  RVS W++EP    P   SP P+ R KRP
Sbjct: 354 GIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPAL-SPVPMPRPKRP 412

Query: 378 WPSGLPS 384
             +  PS
Sbjct: 413 RSNIAPS 419



 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           +R+  KVHK G + GRS+D+SKF +Y+EL +EL R+F   G+L  P++  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD-WLIVYTDEEN 790

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 856
           D++L+GDDPWQEF   V  I I +  EV++M  G
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPG 824


>sp|Q5JK20|ARFD_ORYSJ Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4
           PE=2 SV=1
          Length = 808

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/367 (54%), Positives = 262/367 (71%), Gaps = 7/367 (1%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV AS N+  D+ +  Y +LP +L+C++
Sbjct: 21  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 79

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDV-YLLPAELGAPNKQPTNYFCKTLTASDTS 138
            N+ + A+ +TDEVYAQ+ L P   Q +  V    P       + P   FCKTLTASDTS
Sbjct: 80  LNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTS 139

Query: 139 THGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 198
           THGGFSV RR A++  PPLD +Q+PP QEL+A+DLH  +W+FRHIFRGQP+RHLL +GWS
Sbjct: 140 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWS 199

Query: 199 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 258
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA R  + +PSSV+SS SMH+G+LA A HA 
Sbjct: 200 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAI 259

Query: 259 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
            T S FT++Y PR SPSEF+IP  +Y+++V +   SVGMRFRM FE EE+  +R+ GTI 
Sbjct: 260 NTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSVGMRFRMRFEGEEAPEQRFTGTII 318

Query: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPL-RLKRP 377
           G  +LDPV WP S WRS+KV WDE +   R  RVS W+IEP ++ P+  +P PL R+KRP
Sbjct: 319 GSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV--NPLPLSRVKRP 375

Query: 378 WPSGLPS 384
            P+  P+
Sbjct: 376 RPNAPPA 382



 Score =  100 bits (248), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 67/91 (73%), Gaps = 2/91 (2%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TR+  KVHK G + GRS+D+SKFS+YDEL++EL +MF  +G+L    ++ WQ+V+ D E 
Sbjct: 691 TRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN-WQIVYTDNEG 749

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
           D++L+GDDPW+EF + V  I I +  EVQ+M
Sbjct: 750 DMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM 780


>sp|Q6YVY0|ARFG_ORYSJ Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7
           PE=2 SV=1
          Length = 678

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 257/361 (71%), Gaps = 5/361 (1%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G  V YFPQGH EQ+ AST++++D H+P + NLP +++C++
Sbjct: 23  LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKV 81

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTST 139
            N+ + A+ ++DEVYAQ+ LQP +  +Q ++     E   P K   + FCKTLTASDTST
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEA--DQNELTSPKPEPHEPEKCNVHSFCKTLTASDTST 139

Query: 140 HGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 199
           HGGFSV RR AE+  PPLD +Q PP QEL+ARDLH NEW FRHIFRGQP+RHLLTTGWSV
Sbjct: 140 HGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199

Query: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
           FVS+KRLVAGD+ +F+  E  +L +G+RR  R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 200 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 259

Query: 260 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
           T + F++FY PR S SEFV+   KY++A  ++++SVGMRF+M FE +E+  RR+ GTI G
Sbjct: 260 TGTLFSVFYKPRTSQSEFVVSANKYLEA-KNSKISVGMRFKMRFEGDEAPERRFSGTIIG 318

Query: 320 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPF-PLRLKRPW 378
           +  +    W NS WRS+KV WDE +   R  RVS WE+EPL       SP  P R KR  
Sbjct: 319 VGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRAR 378

Query: 379 P 379
           P
Sbjct: 379 P 379



 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
            R+  KV   G + GR++D+++   YD+LR +L  MF ++G+L    +  W++V+ D E+
Sbjct: 547 VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDED 605

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
           D++L+GDDPW EF + V  I I +  E +Q+
Sbjct: 606 DMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636


>sp|Q2R3F5|ARFW_ORYSJ Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23
           PE=1 SV=2
          Length = 853

 Score =  395 bits (1015), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/371 (53%), Positives = 265/371 (71%), Gaps = 8/371 (2%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +V YFPQGH EQV ASTN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYL---LPAELGAPNKQP-TNYFCKTLTAS 135
            N+ + A+ +TDEVYAQ+TL P S Q++ +      +P+   A + +P  + FCKTLTAS
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTAS 156

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSV RR A++  PPLD S+ PP QEL+A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 157 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 216

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA R QT +PSSV+SS SMH+G+LA A 
Sbjct: 217 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 276

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HA  T + FT++Y PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 277 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN-YSIGMRFKMRFEGEEAPEQRFTG 335

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TI G+ D DP  WP S WRS+KV WDE+++  R  RVS W+IEP  + P  +     R K
Sbjct: 336 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTK 395

Query: 376 --RPWPSGLPS 384
             RP  + LP+
Sbjct: 396 RLRPNATALPA 406



 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TR+  KVHK G + GRS+D++KF+ Y+EL +EL  MF   G+L+ P++  W +V+ D E 
Sbjct: 724 TRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE-WMVVYTDNEG 782

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 856
           D++L+GDDPW EF + V  I I +  EVQ+M  G
Sbjct: 783 DMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPG 816


>sp|Q8L7G0|ARFA_ARATH Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2
          Length = 665

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/367 (53%), Positives = 258/367 (70%), Gaps = 6/367 (1%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ AS ++ ++  +P++ NLP +++C++
Sbjct: 19  LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTST 139
            N+   A+ ETDEVYAQ+TL P   Q +      P +   P K   + FCKTLTASDTST
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQ--EPEKCTVHSFCKTLTASDTST 135

Query: 140 HGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 199
           HGGFSV RR A+   PPLD SQ PP QEL+A DLH++EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195

Query: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
           FVS+K+LVAGD+ +F+  E  +L +G+RR  R QT +PSSV+SS SMHIG+LA AAHA  
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255

Query: 260 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
           T + F++FY PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314

Query: 320 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYSSPFPLRLKRP 377
           + +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KRP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374

Query: 378 WPSGLPS 384
            P GLPS
Sbjct: 375 RPPGLPS 381



 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 765 RTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREND 823
           R+  KVH  GS  GR++D+++   Y++L  +L  MF ++G+L +  +  WQ+V+ D E+D
Sbjct: 542 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 600

Query: 824 VLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
           ++++GDDPW EF   V  I I +P EV+++
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>sp|Q0JCZ4|ARFI_ORYSJ Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9
           PE=2 SV=1
          Length = 673

 Score =  394 bits (1011), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/369 (54%), Positives = 260/369 (70%), Gaps = 9/369 (2%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ ASTN+++D ++P + NLP +++C +
Sbjct: 21  LFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NLPSKILCSV 79

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTST 139
            N+ + A+ ++DEVYAQ+ LQP +  +Q ++  L  EL    K   + FCKTLTASDTST
Sbjct: 80  VNVELRAEADSDEVYAQIMLQPEA--DQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 137

Query: 140 HGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 199
           HGGFSV RR AE+  P LD SQ PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 138 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 197

Query: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
           FVS+KRLVAGD+ +F+  E  +L +G+RR  R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 198 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 257

Query: 260 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
           T + F++FY PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR+ GTI G
Sbjct: 258 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEGDEAPERRFSGTIIG 316

Query: 320 ISDLDPVR---WPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYSSPFPLRLK 375
           I  +  +    W +S W+S+KV WDE +A  R  RVS WE+EPL  + P    P PLR K
Sbjct: 317 IGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQP-PLRNK 375

Query: 376 RPWPSGLPS 384
           R  P   PS
Sbjct: 376 RARPPASPS 384



 Score = 77.4 bits (189), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 4/112 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
            R+  KV   G + GR++D++K + Y +LRS+L  MF ++G L  P    WQ+V+ D E+
Sbjct: 546 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDL-CPTLKRWQVVYTDDED 604

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMG-KGLSPVTSGPGQRLSSNNN 873
           D++L+GDDPW EF + V  I I S  E + +  K   PV  G   +LSS N+
Sbjct: 605 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVI-GDTIKLSSMNS 655


>sp|A2ZET6|ARFW_ORYSI Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23
           PE=2 SV=1
          Length = 853

 Score =  392 bits (1007), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/371 (52%), Positives = 264/371 (71%), Gaps = 8/371 (2%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +V YFPQGH EQV ASTN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYL---LPAELGAPNKQP-TNYFCKTLTAS 135
            N+ + A+ +TDEVYAQ+TL P   Q++ +      +P+   A + +P  + FCKTLTAS
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTAS 156

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           DTSTHGGFSV RR A++  PPLD S+ PP QEL+A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 157 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 216

Query: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255
           GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA R QT +PSSV+SS SMH+G+LA A 
Sbjct: 217 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 276

Query: 256 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315
           HA  T + FT++Y PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 277 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRN-YSIGMRFKMRFEGEEAPEQRFTG 335

Query: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLRLK 375
           TI G+ D DP  WP S WRS+KV WDE+++  R  RVS W+IEP  + P  +     R K
Sbjct: 336 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTK 395

Query: 376 --RPWPSGLPS 384
             RP  + LP+
Sbjct: 396 RLRPNATALPA 406



 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TR+  KVHK G + GRS+D++KF+ Y+EL +EL  MF   G+L+ P++  W +V+ D E 
Sbjct: 724 TRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE-WMVVYTDNEG 782

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 856
           D++L+GDDPW EF + V  I I +  EVQ+M  G
Sbjct: 783 DMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPG 816


>sp|Q2QQX6|ARFX_ORYSJ Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24
           PE=2 SV=1
          Length = 841

 Score =  387 bits (993), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/393 (50%), Positives = 260/393 (66%), Gaps = 20/393 (5%)

Query: 23  ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNL 82
           ELW ACAGPLV++P VG RV Y PQGH EQV ASTN+  +       NLP ++ C++ N+
Sbjct: 32  ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91

Query: 83  TMHADVETDEVYAQMTLQPLSPQE--------------QKDVYLLPAELGAPNKQPTNYF 128
            + A+ +TDEVYAQ+TL P   Q+              +++  + PA    P     + F
Sbjct: 92  ELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPR---VHSF 148

Query: 129 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQP 188
           CKTLTASDTSTHGGFSV RR A++  PPLD SQ PP QEL+A+DLH  EW+FRHIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 208

Query: 189 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHI 248
           +RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 268

Query: 249 GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEES 308
           G+LA A HA  T + FT++Y PR SPSEFV+P   Y +++     S+GMRF+M FE EE+
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNH-SIGMRFKMTFEGEEA 327

Query: 309 SVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSS 368
           + +R+ GTI G+ D DP  W +S WRS+KV WDE+ +  R  RVS W+IEP  + P   +
Sbjct: 328 AEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANS-PSPVN 386

Query: 369 PFPL-RLKRPWPSGLPSFHGMKDGDMSINSPLM 400
           P P  R KR  P+ L S   +   +  + S +M
Sbjct: 387 PLPAPRTKRARPNVLASSPDLSAVNKEVASKVM 419



 Score = 97.1 bits (240), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 6/115 (5%)

Query: 743 SCVDESGFLQSSENVDQVNPPTRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGL 801
           SC D +  +QS     Q N  +R+  KVHK G + GRS+D++KF+ YDEL +EL +MF  
Sbjct: 695 SCPDGTKNIQSK----QQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDF 750

Query: 802 EGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 856
            G+L    ++ W +V+ D E D++L+GDDPW EF N V  I I +  EVQ+M  G
Sbjct: 751 NGELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPG 804


>sp|Q9ZTX9|ARFD_ARATH Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=1 SV=1
          Length = 788

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/368 (52%), Positives = 249/368 (67%), Gaps = 13/368 (3%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           + SELWHACAGPL  LP  G+ VVYFPQGH EQ  A  +      IP + +L PQ++C++
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQIVCRV 119

Query: 80  HNLTMHADVETDEVYAQMTLQPLSP-----QEQKDVYLLPAEL----GAPNKQPTNYFCK 130
            N+ + A+ +TDEVY Q+TL PL        E K+V  L  E      +  K+  + FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179

Query: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKR 190
           TLTASDTSTHGGFSVPRRAAE  F PLDY Q  P+QELIA+DLH  EWKFRHI+RGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239

Query: 191 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 250
           HLLTTGWS+FVS K LV+GD+VLF+ +E  +L LGIRRA RP+  +P S++  +S    +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298

Query: 251 LAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV 310
           L+  A+A +T S F +FY+PRA+ +EFVIP  KY+ ++  + V +G RFRM FE ++S  
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357

Query: 311 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPF 370
           RR  G +TG+ DLDP RWPNS WR + V WDES   + Q RVS WEI+P  + P  S   
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQS 417

Query: 371 PLRLKRPW 378
             R KRPW
Sbjct: 418 SPRPKRPW 425



 Score = 93.6 bits (231), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 18/177 (10%)

Query: 680 SGDPQNNLLFGVSIDS-SLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSD 738
           SG P   + FG          + GLPN       N +  LP+         G++     +
Sbjct: 588 SGPPSRAINFGEETRKFDAQNEGGLPN-------NVTADLPFKIDMMGKQKGSEL----N 636

Query: 739 MTTSSCVDESGF---LQSSENVDQVNPPTRTFVKVHKSGS-FGRSLDISKFSSYDELRSE 794
           M  SS     GF   +++  +  Q +   R   KVHK GS  GR++D+S+ + YD+L  E
Sbjct: 637 MNASSGCKLFGFSLPVETPASKPQ-SSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLME 695

Query: 795 LARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQ 851
           L R+F +EG L DP++ GW++++ D END++++GDDPW +F N V  I + +  EV+
Sbjct: 696 LERLFNMEGLLRDPEK-GWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVE 751


>sp|Q9ZPY6|ARFK_ARATH Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3
          Length = 622

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/370 (50%), Positives = 254/370 (68%), Gaps = 11/370 (2%)

Query: 1   MRLATSGFNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE 60
           ++L   G+N  + + E   L +ELW ACAGPLV +P  G RV YFPQGH EQ+ ASTN+ 
Sbjct: 23  LKLIAVGWNLGSNDDE---LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQG 79

Query: 61  V-DAHIPNYPNLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA 119
           V D  IP + NLPP+++C++ ++T+ A+ ETDEVYAQ+TLQP   ++Q +   L   L  
Sbjct: 80  VVDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLVE 136

Query: 120 PNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWK 179
           P K   + F K LTASDTSTHGGFSV R+ A +  P LD +Q  P QEL+ARDLH  EW+
Sbjct: 137 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 196

Query: 180 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS 239
           F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+  E   L +G+RR  + Q+ MP+S
Sbjct: 197 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 256

Query: 240 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 299
           V+SS SM +G+LA A+HA  T + F +FY PR   S+F+I + KY+ A+ +   S+GMR+
Sbjct: 257 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRY 313

Query: 300 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359
           RM FE EES  R + GTI G  DL   +WP S WRS+++ WDE ++ +R  +VS WEIEP
Sbjct: 314 RMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 372

Query: 360 LTTFPMYSSP 369
            +   +  +P
Sbjct: 373 FSPSALTPTP 382



 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 5/115 (4%)

Query: 740 TTSSCVDESGFLQSSENVDQVNPPTRTFVKVHKSGS-FGRSLDISKFSSYDELRSELARM 798
           +T+ C D +      E   Q +  TR+ +KV   G+  GR++D++   SYDEL  EL +M
Sbjct: 488 STTKCQDPNSSNSPKEQKQQTS--TRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKM 545

Query: 799 FGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
           F +EG+L    +  W +VF D E D +L+GDDPW EF      + I    EV++M
Sbjct: 546 FEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598


>sp|Q9C5W9|ARFR_ARATH Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1
          Length = 602

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/399 (49%), Positives = 261/399 (65%), Gaps = 25/399 (6%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAH-IPNYPNLPPQLICQ 78
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ ASTN+ +++  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 79  LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTS 138
           + ++T+ A+ ETDEVYAQ+TLQP   ++Q +   L   +  P KQ  + F K LTASDTS
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTS 138

Query: 139 THGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 198
           THGGFSV R+ A +  P LD +Q  P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 THGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWS 198

Query: 199 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 258
            FVS+KRLVAGD+ +F+  E   L +G+RR  R Q+ MP+SV+SS SMH+G+LA A+HA 
Sbjct: 199 TFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAV 258

Query: 259 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
            T + F +FY PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GTI 
Sbjct: 259 RTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIV 315

Query: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM------------ 365
           G  DL   +WP S WRS++V WDE T  +R  +VS WEIEP L T P+            
Sbjct: 316 GSGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCK 374

Query: 366 YSSPFPLRLKRPWPSGLPSF-HGMKDGDMSINSPLMWLQ 403
            S P    +K P P   PSF + +     SIN+ L   Q
Sbjct: 375 RSRPIEPSVKTPAP---PSFLYSLPQSQDSINASLKLFQ 410



 Score = 77.0 bits (188), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           +R+  KV   G + GR++D++   SYDEL  EL  MF ++GQL    R  W +VF D E 
Sbjct: 488 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 545

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKGL 857
           D++L GDDPW EF      I I S  EV++M   L
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKL 580


>sp|O23661|ARFC_ARATH Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2
          Length = 608

 Score =  354 bits (908), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 186/380 (48%), Positives = 248/380 (65%), Gaps = 22/380 (5%)

Query: 15  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 74
           G   CL  ELWHACAGPL+SLP  GS V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 75  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVY--LLPAELGAPNKQ------PTN 126
           + C++ ++ +HA+  TDEVYAQ++L P S   ++ V   ++  + G  + +        +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 127 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRG 186
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLDYSQ  P+QEL+ARDLH  EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 187 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSM 246
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA++ +     S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 247 HIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE 306
           +    +  AHA +T+S F+I YNP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 307 ESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTF 363
           ++S RR  G I+GISDLDP+RWP S WR + V WD+  A   Q RVS WEIEP   ++  
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNS 396

Query: 364 PMYSSPFPLRLKRPWPSGLP 383
             + +  P R +  + SG P
Sbjct: 397 GSFVTTGPKRSRIGFSSGKP 416


>sp|Q9XED8|ARFI_ARATH Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1
          Length = 638

 Score =  335 bits (859), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 180/367 (49%), Positives = 240/367 (65%), Gaps = 23/367 (6%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNK-EVDAHIPNYPNLPPQLICQ 78
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ AST + +++   P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67

Query: 79  LHNLTMHADVETDEVYAQMTL--------QPLSPQEQKDVYLLPAELGAPNKQPTNYFCK 130
           + N+++ A+ +TDEVYAQ+TL        +P+SP         P EL  P     + F K
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS------PPELQRPK---VHSFSK 118

Query: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKR 190
            LTASDTSTHGGFSV R+ A +  PPLD +Q  P QEL+A D+H  +WKF+HIFRGQP+R
Sbjct: 119 VLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRR 178

Query: 191 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 250
           HLLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA   Q+ MPSSV+SS SMH+G+
Sbjct: 179 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGV 238

Query: 251 LAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSV 310
           LA A HA  T + F ++Y PR   S+F+I L KY++A+ + + SVGMRF+M FE E+S  
Sbjct: 239 LATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPE 295

Query: 311 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPF 370
           RRY GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP           
Sbjct: 296 RRYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSV 354

Query: 371 PLRLKRP 377
            L+ KRP
Sbjct: 355 MLKNKRP 361



 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 3/94 (3%)

Query: 764 TRTFVKVHKSGS-FGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TR+  KV   G   GR++D++    Y+EL  ++ ++F ++G+L    R+ W++VF D E 
Sbjct: 522 TRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR--SRNQWEIVFTDDEG 579

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQMGKG 856
           D++L+GDDPW EF N V  I I S  EV++M  G
Sbjct: 580 DMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 613


>sp|Q5NB85|ARFA_ORYSJ Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1
           PE=2 SV=1
          Length = 699

 Score =  335 bits (858), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 173/388 (44%), Positives = 241/388 (62%), Gaps = 24/388 (6%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV +P    RV YF QGH EQ+   T+  + A       +P +++C++
Sbjct: 15  LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 74

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASDTST 139
            N+ + A+ ETDEV+AQ+TLQP   QE       P     P +   + FCK LT SDTST
Sbjct: 75  VNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQP-RPVVHSFCKILTPSDTST 133

Query: 140 HGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 199
           HGGFSV RR A +  PPLD S   P QELI +DLH +EW+F+HI+RGQP+RHLLTTGWS 
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193

Query: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
           FV++K+L++GD+ +++ +E  +  +G+RR  + Q+ MP+SV+SS SMH+G+LA+A+HA  
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253

Query: 260 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 319
           TNS F ++Y PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++ GTI G
Sbjct: 254 TNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVG 312

Query: 320 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYSSPFPLR 373
             DL  ++W  S W+S+KV WDE T      RVS WEIE      P    P+ S+    R
Sbjct: 313 EGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSATKNKR 371

Query: 374 LKRP---------------WPSGLPSFH 386
            + P               W SG+P  H
Sbjct: 372 PREPSETIDLQSLEPAQEFWLSGMPQQH 399



 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 761 NPPTRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVD 819
           N   RT +KV   G + GR++D++    Y++L +EL  MF ++       +  W++ F D
Sbjct: 591 NYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDL-----KQKWKVAFTD 645

Query: 820 RENDVLLLGDDPWQEFVNNVGYIKILSPLE 849
            E D + +GDDPW EF   V  I +L P+E
Sbjct: 646 DEGDTMEVGDDPWLEFCQMVRKI-VLYPIE 674


>sp|Q0JKI9|ARFB_ORYSJ Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2
           PE=2 SV=1
          Length = 718

 Score =  331 bits (848), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/382 (46%), Positives = 237/382 (62%), Gaps = 25/382 (6%)

Query: 11  QTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPN 70
           + + G   CL  ELWHACAGP+  LP  GS VVY PQGH E + A+      A +P    
Sbjct: 29  EARAGGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSGPGAAVP---- 82

Query: 71  LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPN--------K 122
             P + C++ ++++HAD  TDEVYAQ++L  ++  E+ +  +   E GA          K
Sbjct: 83  --PHVFCRVVDVSLHADAATDEVYAQVSL--VADNEEVERRMREGEDGAACDGEGEDAVK 138

Query: 123 QPT---NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWK 179
           +P    + FCKTLTASDTSTHGGFSVPRRAAE  FPPLDYS   P QEL+A+DLH  EW+
Sbjct: 139 RPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWR 198

Query: 180 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS 239
           FRHI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+  E  +L LG+RRA + +   P  
Sbjct: 199 FRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFP 258

Query: 240 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 299
            L +   +   L+  AHA A  S F I+YNPR S SEF+IP  K++++ +    SVGMRF
Sbjct: 259 ALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRF 317

Query: 300 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE- 358
           ++ +E+E++S RR  G I G  + DP+ W  S W+ + V WD+     R   VS WEIE 
Sbjct: 318 KLRYESEDASERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIEL 376

Query: 359 -PLTTFPMYSSPFPLRLKRPWP 379
               +    S+P   RLK  +P
Sbjct: 377 SGSVSGSHLSTPHSKRLKSCFP 398


>sp|Q8S985|ARFO_ORYSJ Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15
           PE=2 SV=1
          Length = 712

 Score =  329 bits (844), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 177/373 (47%), Positives = 232/373 (62%), Gaps = 15/373 (4%)

Query: 19  CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G  VVY PQGH E +  +      A           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 79  LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQP----TNYFCKTLTA 134
           + ++T+ AD  TDEVYAQ++L P   +  +       E G   KQ      + FCKTLTA
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTA 148

Query: 135 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 194
           SDTSTHGGFSVPRRAAE  FPPLDYSQ  P+QEL+A+DLH  EW+FRHI+RGQP+RHLLT
Sbjct: 149 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLT 208

Query: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 254
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA + +       L +   ++G LA  
Sbjct: 209 TGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANV 268

Query: 255 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 314
           AHA AT S F I+YNPR S SEF++P  K++K++     SVG+RF+M +E+E+++ RRY 
Sbjct: 269 AHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDATERRYT 327

Query: 315 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF--PMYSSPFPL 372
           G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE  ++      S+P   
Sbjct: 328 GIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSK 386

Query: 373 RLKRPWPSGLPSF 385
           RLK   P   P +
Sbjct: 387 RLKPCLPHVNPEY 399


>sp|Q5JMM1|ARFC_ORYSJ Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3
           PE=2 SV=1
          Length = 731

 Score =  327 bits (839), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 164/344 (47%), Positives = 225/344 (65%), Gaps = 14/344 (4%)

Query: 23  ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNL 82
           +LWHACAGP+VSLP  GS VVY PQGH     A      +  +     LPP + C++ ++
Sbjct: 82  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA----LPPHVACRVVDV 137

Query: 83  TMHADVETDEVYAQMTLQPLSPQEQKDVY--------LLPAELGAPNKQPTNYFCKTLTA 134
            + AD  TDEVYA++ L+      +++++         +         +  + FCKTLTA
Sbjct: 138 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 197

Query: 135 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 194
           SDTSTHGGFSVPRRAAE  FPPLD+ Q  P+QEL+A+DLH  +W+FRHI+RGQP+RHLLT
Sbjct: 198 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 257

Query: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 254
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAT+ +        SS+S  +  L+A 
Sbjct: 258 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 317

Query: 255 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 314
           A +    S F I YNPRA+ SE+V+P  K+VK+  H  V +GMRF+  FE+E+ + RR  
Sbjct: 318 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHFESEDVNERR-S 375

Query: 315 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
           G I G+S++DP+RWP S WRS+ V W+++T    Q RVS WEIE
Sbjct: 376 GMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 419


>sp|Q9C8N9|ARFU_ARATH Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21
           PE=3 SV=2
          Length = 606

 Score =  306 bits (785), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/397 (41%), Positives = 239/397 (60%), Gaps = 21/397 (5%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G K  +  +LW  CAGPL  +P +G  V YFPQG+ E V AST +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           +L C++  + +  +  +DE+YA++TL P + Q      ++P +     +   N F K LT
Sbjct: 77  KLQCRVIAIHLKVENNSDEIYAEITLMPDTTQ-----VVIPTQSENRFRPLVNSFTKVLT 131

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTS +GGFSVP++ A +  PPLD SQ  PAQE++A DLHDN+W+FRH +RG P+RH L
Sbjct: 132 ASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSL 191

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           TTGW+ F+++K+LV GD ++F+  E  +L +GIRRA   Q  +PSS++S D M  G++A+
Sbjct: 192 TTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 251

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           A HA      F + Y PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 252 AKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 308

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYSSPF 370
            GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE   P    P  S   
Sbjct: 309 FGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLLK 367

Query: 371 PLRLKRPWPSGLPSFH--------GMKDGDMSINSPL 399
             RL+     G  S H        G + G +S+ SP+
Sbjct: 368 NKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPM 404



 Score = 70.9 bits (172), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           +RT  KV   G + GR++D+S  + YD+L  EL ++F ++GQL+   R+ W++ F D + 
Sbjct: 510 SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQ--TRNQWKIAFTDSDG 567

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQ 851
             +L+GDDPW EF   V  I I S  EV+
Sbjct: 568 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 596


>sp|Q0DGS1|ARFN_ORYSJ Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14
           PE=2 SV=2
          Length = 687

 Score =  303 bits (777), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/346 (47%), Positives = 222/346 (64%), Gaps = 17/346 (4%)

Query: 23  ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNL 82
           ELWHACAGP V+LP  GS +VY PQ H     A+     +        +PP + C++  +
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRVVGV 78

Query: 83  TMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGA-------PNKQPT--NYFCKTLT 133
            + AD  TDEVYA++ L       Q++      E GA         K+P   + FCKTLT
Sbjct: 79  ELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLT 138

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTSTHGGFSVPRRAAE  FPPLDY    P+QELIA DLH  +WKFRHI+RGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLL 198

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQT-VMPSSVLSSDSMHIGLLA 252
           T GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA + +   +   V SSDS  + +L+
Sbjct: 199 TIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDS-KLRILS 257

Query: 253 AAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRR 312
           + A +    S F I +NPR+  SEF++P  + +K++ H   S+GMRFR+ +E+E+++  R
Sbjct: 258 SVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYESEDAN-ER 315

Query: 313 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
             G I+GIS++DP+RWP S W+ + V WD+ST    Q RVS WEIE
Sbjct: 316 SAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 361


>sp|Q9LQE8|ARFN_ARATH Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14
           PE=3 SV=2
          Length = 605

 Score =  301 bits (772), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 224/363 (61%), Gaps = 10/363 (2%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G K  +  +LW  CAGPL  +P +G +V YFPQGH E V AST +E++   P   + P 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPS 76

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           +L C++  + +  +  +DE YA++TL P + Q      ++P +     +   N F K LT
Sbjct: 77  KLQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNQNQFRPLVNSFTKVLT 131

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTS HGGFSVP++ A +  PPLD SQ  P QE++A DLH N+W+FRHI+RG  +RHLL
Sbjct: 132 ASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLL 191

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           T GW+ F ++K+LV GD ++F+  E  +L +GIRRA   Q  +PSS++S +SM  G++A+
Sbjct: 192 TIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIAS 251

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           A HA      F + Y PR+  S+F++   K++  V + + +VG RF M FE ++ S RR 
Sbjct: 252 AKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERRS 308

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLR 373
            GTI G+SD  P  W  S WRS++V WDE  +  R  +VS W+IE LT +   S    L+
Sbjct: 309 FGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLK 367

Query: 374 LKR 376
            KR
Sbjct: 368 NKR 370



 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TRT  KV   G + GR++D+S  + YD+L  EL ++F L+GQL+   R+ W++ F + E 
Sbjct: 509 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEE 566

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
           D +L+G+DPW EF N V  I I S  EV+ +
Sbjct: 567 DKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597


>sp|Q9XID4|ARFL_ARATH Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2
          Length = 593

 Score =  297 bits (761), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 225/365 (61%), Gaps = 14/365 (3%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G K  +  +LW  CAGPL  +P +G +V YFPQGH E V  ST +E++   P   +LP 
Sbjct: 18  DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           +L C++  + +  +  +DE YA++TL P + Q      ++P +     +   N F K LT
Sbjct: 77  KLQCRVIAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLT 131

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTS HGGF VP++ A +  P LD SQ  PAQEL+A DLH N+W+F H +RG P+RHLL
Sbjct: 132 ASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLL 191

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           TTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA   Q  +PSS++S D M  G++A+
Sbjct: 192 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVAS 251

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           A HA      FT+ Y PR+  S+F++   K++ AV + + +VG RF M  E ++ S RR 
Sbjct: 252 AKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRC 308

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSP--FP 371
            GTI G+SD  P  W  S WRS++V WDE T+     +VS W+IE L   P  + P  F 
Sbjct: 309 FGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSFL 365

Query: 372 LRLKR 376
           L+ KR
Sbjct: 366 LKNKR 370



 Score = 73.2 bits (178), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 3/82 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           +RT  KV   G + GR++D+S  + YD+L  EL ++F ++GQL+   R+ W++ F D + 
Sbjct: 510 SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQ--TRNQWEIAFTDSDE 567

Query: 823 DVLLLGDDPWQEFVNNVGYIKI 844
           D +L+GDDPW EF N V  I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589


>sp|Q9LQE3|ARFO_ARATH Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15
           PE=3 SV=2
          Length = 593

 Score =  294 bits (752), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 163/394 (41%), Positives = 233/394 (59%), Gaps = 21/394 (5%)

Query: 17  KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLI 76
           K  +  +LW  CAGPL  +P +G +V YFPQG+ E V AST +E++   P   +LP +L 
Sbjct: 21  KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79

Query: 77  CQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTASD 136
           C++  + +  +  +DE YA++TL P + Q      ++P +     +   N F K LTASD
Sbjct: 80  CRVIAIHLKVENNSDETYAKITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLTASD 134

Query: 137 TSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 196
            S +G FSVP++ A +  PPLD SQ  PAQEL+A DLH N+W FRH +RG P+RHLLTTG
Sbjct: 135 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 194

Query: 197 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAH 256
           W+ F ++K+LV GD ++F+  E  +L +GIRRA   Q  +PSS++S D M  G++A+A H
Sbjct: 195 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254

Query: 257 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 316
           A      F + Y PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GT
Sbjct: 255 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGT 311

Query: 317 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYSSPFPLR 373
           I G+S+  P  W  S WRS++V WDE  +  R  +VS WEIE   P    P  S     R
Sbjct: 312 IIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSSFLKNKR 370

Query: 374 LKRPWPSGLPSFH--------GMKDGDMSINSPL 399
           L+     G  S H        G + G +S+ SP+
Sbjct: 371 LREVNEFGSSSSHLLPPILTQGQEIGQLSVASPM 404



 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 7/132 (5%)

Query: 715 SLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKS 773
           SL+ P    +    +G+D    S +T      +S  L+S   +       TRT  KV   
Sbjct: 463 SLATPPVIKDPIEQIGSDI---SKLTEGKKFGQSQTLRSPTKIQSKQFSSTRTCTKVQMQ 519

Query: 774 G-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPW 832
           G + GR++D+S  + YD+L  EL ++F L+GQL+   R+ W+++F   + D +L+GDDPW
Sbjct: 520 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--TRNQWKIIFTGSDEDEMLVGDDPW 577

Query: 833 QEFVNNVGYIKI 844
            EF N V  I I
Sbjct: 578 PEFCNMVKRIYI 589


>sp|Q9C7I9|ARFT_ARATH Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3
          Length = 590

 Score =  289 bits (740), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 229/386 (59%), Gaps = 15/386 (3%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G K  +  +LW  CAGPL  +P +G  V YFPQG+ E V AST +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           +L C++  + +  +  +DE YA++TL P + Q      ++P +     +   N F K LT
Sbjct: 77  KLQCRVIAIHLKVENNSDETYAEITLMPDTTQ-----VVIPTQSENQFRPLVNSFTKVLT 131

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTS +GGF VP++ A +  PPL      PAQEL+A+DLH N+W+FRH +RG P+RH L
Sbjct: 132 ASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSL 187

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           TTGW+ F ++K+LV GD ++F+  E  +L +GIRRA   Q  +PSS++S D M  G++A+
Sbjct: 188 TTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 247

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           A HA      F + Y P    S+F++   K++ A+ + +  VG RF M FE ++ S RRY
Sbjct: 248 AKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRY 306

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLR 373
            GTI G++D  P  W  S WRS++V WDE  +  R  +VS WEIE L +    + P    
Sbjct: 307 FGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMS--ALNVPRSSL 363

Query: 374 LKRPWPSGLPSFHGMKDGDMSINSPL 399
           LK      +  F G + G +S+ SP+
Sbjct: 364 LKNKRLREVNEF-GQEIGQLSVASPM 388



 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 715 SLSLPYAASNFTNNVGTDFPLNSDMTTSSCVDESGFLQSSENVDQVN-PPTRTFVKVHKS 773
           SL++P    +    +G+D    S +T      +S  L+S   +       TRT  KV   
Sbjct: 447 SLAIPLVIKDPIEEIGSDI---SKLTEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQ 503

Query: 774 G-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDPW 832
           G + GR++D+S  + YD+L  EL ++F L+GQL+   R+ W++ F D +   +L+GDDPW
Sbjct: 504 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--TRNQWKIAFTDSDGYEMLVGDDPW 561

Query: 833 QEFVNNVGYIKILSPLEVQ 851
            EF   V  I I S  EV+
Sbjct: 562 PEFCKMVKKILIYSKEEVK 580


>sp|Q9SKN5|ARFJ_ARATH Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1
          Length = 693

 Score =  286 bits (732), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 171/427 (40%), Positives = 234/427 (54%), Gaps = 68/427 (15%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIP---NYPNLP 72
           ++K L+ +LWHACAG +V +P + S V YF QGH+E           AH P   + P +P
Sbjct: 3   QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEH----------AHAPPDFHAPRVP 52

Query: 73  PQLICQLHNLTMHADVETDEVYAQMTLQPLSPQE---QKDVYLL---PAELGAPN-KQPT 125
           P ++C++ ++   AD ETDEV+A++TL PL   +   + D  L    P+  G  N K+  
Sbjct: 53  PLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKP 112

Query: 126 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFR 185
             F KTLT SD +  GGFSVPR  AE +FP LDYS  PP Q +IA+D+H   WKFRHI+R
Sbjct: 113 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYR 172

Query: 186 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDS 245
           G P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R       S   SD+
Sbjct: 173 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL---GSNAGSDN 229

Query: 246 MHIGLLAAA----------------------AHAAATNSR-----------------FTI 266
            + G                            +AAAT                    F +
Sbjct: 230 PYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEV 289

Query: 267 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDP 325
            Y PRAS  EF +  A  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP
Sbjct: 290 VYYPRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADP 348

Query: 326 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYSSPFPLR--LKRPWPSGL 382
           +RWPNS WR ++V WDE    +   RVS W +E ++  P ++ SPF  R  ++ P P   
Sbjct: 349 IRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQPFEF 408

Query: 383 PSFHGMK 389
           P FHG K
Sbjct: 409 P-FHGTK 414



 Score = 39.7 bits (91), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGW--QLVFVDRENDVLLLGD 829
           +S   GR+LD+S   SY EL  +LA MF +E      +RS     +V+ D    +  +GD
Sbjct: 588 ESEDVGRTLDLSVIGSYQELYRKLAEMFHIE------ERSDLLTHVVYRDANGVIKRIGD 641

Query: 830 DPWQEFVNNVGYIKI 844
           +P+ +F+     + I
Sbjct: 642 EPFSDFMKATKRLTI 656


>sp|Q9C8N7|ARFV_ARATH Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2
          Length = 598

 Score =  284 bits (727), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/362 (43%), Positives = 225/362 (62%), Gaps = 14/362 (3%)

Query: 14  EGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPP 73
           +G K  +  +LW  CAGPL  +P +G ++ YFPQG+ E V AST +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76

Query: 74  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLT 133
           +L C++  + +  +  +DE YA++TL P + Q      ++P +     +   N F K LT
Sbjct: 77  KLQCRVIAIQLKVENNSDETYAEITLMPDTTQ-----VVIPTQNENQFRPLVNSFTKVLT 131

Query: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 193
           ASDTS  GGF VP++ A +  PPLD SQ  P QEL+A DLH N+W+F H +RG P+RHLL
Sbjct: 132 ASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLL 189

Query: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
           TTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA   Q  +PSS++S +SM  G++A+
Sbjct: 190 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIAS 249

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
           A HA      F + Y PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY
Sbjct: 250 AKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 306

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFPLR 373
            GTI G+SD  P  W  S WR+++V WDE  +  R  +VS WEIE L   P  + P P  
Sbjct: 307 FGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNVPRPSL 363

Query: 374 LK 375
           LK
Sbjct: 364 LK 365



 Score = 73.6 bits (179), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 7/93 (7%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TRT  KV   G +  R++D+S  + YD+L  EL  +F L+GQL+   R+ W++ F D ++
Sbjct: 508 TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQ--TRNQWEIAFTDSDD 565

Query: 823 DVLLLGDDPWQEFVNNVGYIKILS----PLEVQ 851
           D +L+GDDPW EF N V  I I       LEVQ
Sbjct: 566 DKMLVGDDPWPEFCNMVKKILIFKRGGQKLEVQ 598


>sp|Q9FX25|ARFM_ARATH Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3
          Length = 621

 Score =  281 bits (719), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/347 (42%), Positives = 210/347 (60%), Gaps = 14/347 (4%)

Query: 17  KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLI 76
           K  +  +LW+ CAGPL  LP  G +V YFPQGH E +  ST  E+D HI    +LP +L 
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLR 77

Query: 77  CQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYF-CKTLTAS 135
           C++  +    D  TDEVYAQ++L P + +      ++        ++P  YF  K LTAS
Sbjct: 78  CRVVAIDRKVDKNTDEVYAQISLMPDTTE------VMTHNTTMDTRRPIVYFFSKILTAS 131

Query: 136 DTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 195
           D S  GG  +P++ A + FPPLD SQ    Q L+A+DL+  EW F+H+FRG P+RH+ T+
Sbjct: 132 DVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTS 191

Query: 196 --GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
             GWSVF + KRL+ GD  + +  E  +L  GIRRA   Q  +PSSV+S++ M  G++A+
Sbjct: 192 GGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIAS 251

Query: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 313
             +A  T   F + Y P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY
Sbjct: 252 VVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRY 308

Query: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
            GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 309 DGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354



 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 3/91 (3%)

Query: 764 TRTFVKVHKSG-SFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDREN 822
           TR+ +KVH  G +  R++D++    Y++L  +L  +F L+ +L    R+ W++VF + E 
Sbjct: 507 TRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEG 564

Query: 823 DVLLLGDDPWQEFVNNVGYIKILSPLEVQQM 853
             +L+GDDPW EF N    I I S  E+++M
Sbjct: 565 AEMLVGDDPWPEFCNMAKRIFICSKEEIKKM 595


>sp|Q93YR9|ARFP_ARATH Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1
          Length = 670

 Score =  281 bits (718), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/394 (40%), Positives = 221/394 (56%), Gaps = 53/394 (13%)

Query: 15  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 74
           G +K L+ +LWHACAG +V +PP+ S+V YFPQGH+E      +        N P +PP 
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63

Query: 75  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELG---APNKQPTNYFCKT 131
           ++C++  +   AD E+DEV+A++ L PL   E  D      E       N + T  F KT
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKT 123

Query: 132 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 191
           LT SD +  GGFSVPR  AE +FP LDY+  PP Q ++A+D+H + WKFRHI+RG P+RH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH 183

Query: 192 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR------PQ----------TV 235
           LLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R      P+          + 
Sbjct: 184 LLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSC 243

Query: 236 MPSSVLSSDSMH------------IGLLAA-----AAHAAATNSRFTIFYNPRASPSEFV 278
             SS+L  D  +             G + A     AA  A +   F + Y PRAS SEF 
Sbjct: 244 GYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFC 303

Query: 279 IPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNSHWRSVK 337
           +  A   +A        GMRF+M FETE+SS +  +MGT++ ++  DP+RWPNS WR ++
Sbjct: 304 VK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQ 362

Query: 338 VGWDESTAGERQPRVSLWEIE--------PLTTF 363
           V WDE    +   RV+ W +E        PLT+F
Sbjct: 363 VAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSF 396



 Score = 38.5 bits (88), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDP 831
           +S   GR+LD+S   SY+EL  +L+ MFG++            +++ D    +   G++P
Sbjct: 592 ESDDVGRTLDLSVLGSYEELSRKLSDMFGIK-----KSEMLSSVLYRDASGAIKYAGNEP 646

Query: 832 WQEFVNNVGYIKILS 846
           + EF+     + IL+
Sbjct: 647 FSEFLKTARRLTILT 661


>sp|Q653H7|ARFR_ORYSJ Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18
           PE=2 SV=1
          Length = 700

 Score =  280 bits (716), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 191/563 (33%), Positives = 274/563 (48%), Gaps = 104/563 (18%)

Query: 10  QQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIP-NY 68
           ++ +    KCL+ +LWHACAG +V +PPV S+V YFPQGH+E            H P  +
Sbjct: 10  KERERESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHA--------QGHGPVEF 61

Query: 69  PN--LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQ-----KDVYLLPAELGAPN 121
           P   +P  ++C++  +   AD +TDEV+A++ L P+   EQ      D  +  A   A  
Sbjct: 62  PGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQ 121

Query: 122 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFR 181
           ++    F KTLT SD +  GGFSVPR  AE +FP LDYS  PP Q ++A+D+H   WKFR
Sbjct: 122 EEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFR 181

Query: 182 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMP---- 237
           HI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P    
Sbjct: 182 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLP 241

Query: 238 ------------------SSVLSSDSMHIGLLAA----------------AAHAAATNSR 263
                             S  L  D     + AA                AA+ A +   
Sbjct: 242 PPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQP 301

Query: 264 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 322
           F + Y PRAS  EF +  A  V+A   T+   GMRF+M FETE+SS +  +MGT++ +  
Sbjct: 302 FEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQV 360

Query: 323 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYSSPF---------PL 372
            DP+RWPNS WR ++V WDE    +   RVS W +E ++  P ++ +PF         PL
Sbjct: 361 ADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPL 420

Query: 373 RLKRPWPSGLPS--FHG--MKDGDMSINSPLMWLQGGVGDQGIQSLNFQGYGVT------ 422
             + P     P+  FHG  +  G      P+ +   G    GIQ      +G++      
Sbjct: 421 YPELPIDGQFPTPMFHGNPLARG----VGPMCYFPDGT-PAGIQGARHAQFGISLSDLHL 475

Query: 423 ----------------PWMQPRLDASI----PGLQPDVYQAMAAAALQEMRTVDSSKLAS 462
                             MQPR+ A +    P  + D+   +   + Q  +  D  K  +
Sbjct: 476 NKLQSSLSPHGLHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPA 535

Query: 463 QSLL---QFQQSQNVSNGTASMI 482
           Q +L        Q +S G A+ +
Sbjct: 536 QLMLFGKPILTEQQISLGDAASV 558



 Score = 41.2 bits (95), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLE-GQLEDPQRSGWQLVFVDRENDVLLLGDD 830
           +S   GR+LD+S   SY+EL   LA MFG+E  +L         + + D    +   GD+
Sbjct: 622 QSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS------HVFYRDAAGALKHTGDE 675

Query: 831 PWQEFVNNVGYIKILS 846
           P+ EF      + IL+
Sbjct: 676 PFSEFTKTARRLNILT 691


>sp|Q9AV47|ARFV_ORYSJ Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22
           PE=2 SV=1
          Length = 698

 Score =  269 bits (688), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 157/400 (39%), Positives = 220/400 (55%), Gaps = 48/400 (12%)

Query: 16  EKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQL 75
           E +CL+ +LWHACAG +V +P   SRV YF QGH+E           A       LPP +
Sbjct: 9   EVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLV 68

Query: 76  ICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAEL---GA------PNKQPTN 126
           +C++  +   AD ++DEVYA++ L P++P E +  +  P EL   GA      P+ +   
Sbjct: 69  LCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAE--FREPDELCPLGAAGDAAEPSPEKPT 126

Query: 127 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRG 186
            F KTLT SD +  GGFSVPR  AE +FP LDY   PP Q ++A+D+H   WKFRHI+RG
Sbjct: 127 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRG 186

Query: 187 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQT----VMP----- 237
            P+RHLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M      
Sbjct: 187 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAP 246

Query: 238 -------SSVLSSDS------------------MHIGLLAAAAHAAATNSRFTIFYNPRA 272
                  S+ L  +                   + +  +  AA  A++   F + Y PRA
Sbjct: 247 GYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRA 306

Query: 273 SPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNS 331
           S  +FV+  A  V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RWPNS
Sbjct: 307 STPDFVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNS 365

Query: 332 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYSSPF 370
            WR ++V WDE    +    VS W +E +++  P++  PF
Sbjct: 366 PWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPF 405



 Score = 38.9 bits (89), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLEGQLEDPQRSGWQLVFVDRENDVLLLGDDP 831
           +S   GR++D+S F SY+EL   LA MFG+E      +     L F D    V   G+ P
Sbjct: 611 ESEDVGRTIDLSVFGSYEELYGRLADMFGIE-----KEEIINHLHFRDAAGVVKHPGEVP 665

Query: 832 WQEFVNNVGYIKILS 846
           + +F+     + I++
Sbjct: 666 FSDFMKAARRLTIIA 680


>sp|Q7XKK6|ARFJ_ORYSJ Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10
           PE=2 SV=3
          Length = 699

 Score =  269 bits (688), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 154/380 (40%), Positives = 213/380 (56%), Gaps = 43/380 (11%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           ++S+LW ACAG + S+PPVG+ V YFPQGH+EQ +A+ +        +   +PP + C++
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 71

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQK-DV---YLLPAELGAPNKQPT-NYFCKTLTA 134
             +   AD E+DEV+A++ L PL P +   DV       A     N +P    F KTLT 
Sbjct: 72  VAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQ 131

Query: 135 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 194
           SD +  GGFSVPR  AE +FP LDYS  PP Q + A+D+H  EW FRHI+RG P+RHLLT
Sbjct: 132 SDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLT 191

Query: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSM-----HIG 249
           TGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+     + G
Sbjct: 192 TGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG 251

Query: 250 LLAAAAHAAATNSR------------------------FTIFYNPRASPSEFVIPLAKYV 285
           L+   A A AT  R                        F + Y PRAS  EF +  A  V
Sbjct: 252 LMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV-RAAAV 310

Query: 286 KAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDEST 344
           +     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRWP S WR ++V WDE  
Sbjct: 311 RTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPE 370

Query: 345 AGERQPRVSLWEIEPLTTFP 364
             +   RV  W +E +++ P
Sbjct: 371 LLQNVKRVCPWLVELVSSMP 390



 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)

Query: 683 PQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTS 742
           P+  LLFG +I +    +NG  + +  S   ++   P  +    + V    P  +   + 
Sbjct: 534 PRGFLLFGQAILTEEQIKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGSPTKNTTPSW 593

Query: 743 SCVDESGFLQSSENVDQVNPP-TRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGL 801
           S     G   S  +  ++NP   + FV+   S + GRSLD+S  SS++EL + L+ MF +
Sbjct: 594 SLPYFGGNNISRASEYELNPGQCKVFVE---SETVGRSLDLSALSSFEELYACLSDMFSI 650

Query: 802 EGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMG 854
                D  RS   LV+     +V   GD+P+  FV +   ++IL+      +G
Sbjct: 651 G---SDELRS--HLVYRSPAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLG 698


>sp|Q01I35|ARFJ_ORYSI Auxin response factor 10 OS=Oryza sativa subsp. indica GN=ARF10
           PE=2 SV=2
          Length = 699

 Score =  269 bits (688), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 154/380 (40%), Positives = 213/380 (56%), Gaps = 43/380 (11%)

Query: 20  LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 79
           ++S+LW ACAG + S+PPVG+ V YFPQGH+EQ +A+ +        +   +PP + C++
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 71

Query: 80  HNLTMHADVETDEVYAQMTLQPLSPQEQK-DV---YLLPAELGAPNKQPT-NYFCKTLTA 134
             +   AD E+DEV+A++ L PL P +   DV       A     N +P    F KTLT 
Sbjct: 72  VAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQ 131

Query: 135 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 194
           SD +  GGFSVPR  AE +FP LDYS  PP Q + A+D+H  EW FRHI+RG P+RHLLT
Sbjct: 132 SDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLT 191

Query: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSM-----HIG 249
           TGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+     + G
Sbjct: 192 TGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG 251

Query: 250 LLAAAAHAAATNSR------------------------FTIFYNPRASPSEFVIPLAKYV 285
           L+   A A AT  R                        F + Y PRAS  EF +  A  V
Sbjct: 252 LMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV-RAAAV 310

Query: 286 KAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDEST 344
           +     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRWP S WR ++V WDE  
Sbjct: 311 RTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPE 370

Query: 345 AGERQPRVSLWEIEPLTTFP 364
             +   RV  W +E +++ P
Sbjct: 371 LLQNVKRVCPWLVELVSSMP 390



 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)

Query: 683 PQNNLLFGVSIDSSLMGQNGLPNLKNISSENESLSLPYAASNFTNNVGTDFPLNSDMTTS 742
           P+  LLFG +I +    +NG  + +  S   ++   P  +    + V    P  +   + 
Sbjct: 534 PRGFLLFGQAILTEEQIKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGSPTKNTTPSW 593

Query: 743 SCVDESGFLQSSENVDQVNPP-TRTFVKVHKSGSFGRSLDISKFSSYDELRSELARMFGL 801
           S     G   S  +  ++NP   + FV+   S + GRSLD+S  SS++EL + L+ MF +
Sbjct: 594 SLPYFGGNNISRASEYELNPGQCKVFVE---SETVGRSLDLSALSSFEELYACLSDMFSI 650

Query: 802 EGQLEDPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVGYIKILSPLEVQQMG 854
                D  RS   LV+     +V   GD+P+  FV +   ++IL+      +G
Sbjct: 651 G---SDELRS--HLVYRSPAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLG 698


>sp|Q6K223|ARFH_ORYSJ Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8
           PE=2 SV=1
          Length = 681

 Score =  268 bits (684), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/398 (39%), Positives = 222/398 (55%), Gaps = 34/398 (8%)

Query: 15  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 74
           G ++C++ +LW ACAG + ++PPVG+ V YFPQGH+E        E+ A       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 75  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAPNKQPTNYFCKTLTA 134
           + C++ ++   AD +TDEV+A++ L PL   E  DV    A  G  +++P + F KTLT 
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS-FAKTLTQ 126

Query: 135 SDTSTHGGFSVPRRAAEKVFPPLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 194
           SD +  GGFSVPR  AE +FP LDY+  PP Q ++A+D+H   W FRHI+RG P+RHLLT
Sbjct: 127 SDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLT 186

Query: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR----PQTVMPSSVLSSDSMHIGL 250
           TGWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL
Sbjct: 187 TGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGL 246

Query: 251 LAA-AAHAAATNSR--------------------FTIFYNPRASPSEFVIPLAKYVKAVY 289
           +   A+  AA   R                    F + Y PRAS  EF +  A  V+A  
Sbjct: 247 MRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAM 305

Query: 290 HTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGER 348
             +   GMRF+M FETE+SS +  +MGT+  +   DP+RWP S WR ++V WDE    + 
Sbjct: 306 RVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQN 365

Query: 349 QPRVSLWEIEPLTTFPMYS-SPFPLRLKRPWPSGLPSF 385
             RVS W +E +++ P  + S F    K+P     P F
Sbjct: 366 VKRVSPWLVELVSSMPAINLSSFSPPRKKPRILAYPEF 403



 Score = 37.0 bits (84), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 772 KSGSFGRSLDISKFSSYDELRSELARMFGLE-GQLEDPQRSGWQLVFVDRENDVLLLGDD 830
           +S + GR+LD+S  +S+++L   L+ MF ++  +L        ++++     +V   GD+
Sbjct: 603 ESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRS------RVLYRGATGEVRHAGDE 656

Query: 831 PWQEFVNNVGYIKILSPLEVQQMG 854
           P+ EF+     + IL+      +G
Sbjct: 657 PFSEFIKLARRLTILTDAGSDNLG 680


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.128    0.376 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 327,784,600
Number of Sequences: 539616
Number of extensions: 14203408
Number of successful extensions: 77054
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 581
Number of HSP's that attempted gapping in prelim test: 38269
Number of HSP's gapped (non-prelim): 11109
length of query: 898
length of database: 191,569,459
effective HSP length: 127
effective length of query: 771
effective length of database: 123,038,227
effective search space: 94862473017
effective search space used: 94862473017
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)