Query 002631
Match_columns 898
No_of_seqs 202 out of 328
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:56:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002631.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002631hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2347 Sec5 subunit of exocys 100.0 4E-114 9E-119 994.1 51.4 761 11-838 162-934 (934)
2 PF15469 Sec5: Exocyst complex 100.0 3.5E-39 7.5E-44 329.9 19.4 179 53-231 1-182 (182)
3 KOG2346 Uncharacterized conser 100.0 1.2E-36 2.5E-41 334.5 34.8 549 11-783 24-622 (636)
4 PF04124 Dor1: Dor1-like famil 99.2 6.9E-10 1.5E-14 124.7 21.8 204 31-240 5-211 (338)
5 PF08700 Vps51: Vps51/Vps67; 98.9 3.5E-09 7.6E-14 95.6 7.6 71 15-85 1-71 (87)
6 KOG2033 Low density lipoprotei 98.2 0.033 7.2E-07 66.2 48.2 199 28-241 12-230 (863)
7 PF10475 DUF2450: Protein of u 98.1 0.00029 6.4E-09 77.9 22.0 192 17-213 10-206 (291)
8 KOG2176 Exocyst complex, subun 98.1 0.054 1.2E-06 65.8 42.7 129 25-161 36-164 (800)
9 KOG2069 Golgi transport comple 97.7 0.0013 2.8E-08 76.8 18.8 187 24-217 23-210 (581)
10 PF04100 Vps53_N: Vps53-like, 97.7 0.0059 1.3E-07 70.2 23.7 208 18-239 2-234 (383)
11 KOG2307 Low density lipoprotei 97.6 0.3 6.5E-06 57.3 43.7 195 12-218 25-234 (705)
12 PF06248 Zw10: Centromere/kine 97.5 0.44 9.6E-06 58.1 39.3 160 33-199 7-179 (593)
13 PF10392 COG5: Golgi transport 97.3 0.0022 4.9E-08 62.8 10.7 113 16-140 4-128 (132)
14 PF04091 Sec15: Exocyst comple 97.2 0.0015 3.2E-08 73.1 10.2 141 634-785 142-288 (311)
15 PF06148 COG2: COG (conserved 96.5 0.0031 6.8E-08 61.7 4.8 68 14-84 7-74 (133)
16 PF10191 COG7: Golgi complex c 96.1 6.1 0.00013 49.8 54.7 218 15-241 5-237 (766)
17 PF04048 Sec8_exocyst: Sec8 ex 95.8 0.1 2.2E-06 51.9 11.2 124 17-146 18-141 (142)
18 PF04437 RINT1_TIP1: RINT-1 / 95.0 0.36 7.7E-06 57.5 14.5 138 627-772 300-443 (494)
19 KOG3691 Exocyst complex subuni 94.9 0.43 9.2E-06 58.7 14.6 150 31-185 41-192 (982)
20 KOG2180 Late Golgi protein sor 94.2 8.8 0.00019 46.9 22.9 173 15-199 14-198 (793)
21 PF06046 Sec6: Exocyst complex 90.4 19 0.00042 43.5 20.3 84 666-756 391-476 (566)
22 PF10474 DUF2451: Protein of u 84.1 18 0.00039 39.1 13.3 88 665-757 78-171 (234)
23 PF14923 CCDC142: Coiled-coil 78.2 31 0.00068 40.7 13.4 95 663-765 257-362 (450)
24 KOG2115 Vacuolar sorting prote 72.9 2.8E+02 0.0061 35.5 30.8 129 64-197 267-398 (951)
25 PF04129 Vps52: Vps52 / Sac2 f 69.2 2.2E+02 0.0047 34.4 18.1 155 96-266 47-216 (508)
26 KOG4424 Predicted Rho/Rac guan 68.8 63 0.0014 39.0 12.8 143 94-257 108-253 (623)
27 KOG0553 TPR repeat-containing 62.0 48 0.001 37.1 9.6 90 116-221 76-182 (304)
28 KOG2347 Sec5 subunit of exocys 60.3 21 0.00046 44.7 7.2 181 9-201 79-269 (934)
29 cd07651 F-BAR_PombeCdc15_like 58.3 2.6E+02 0.0057 29.9 15.1 39 34-72 61-99 (236)
30 KOG1925 Rac1 GTPase effector F 57.3 1.5E+02 0.0033 35.3 12.8 69 178-246 516-596 (817)
31 KOG4648 Uncharacterized conser 53.9 1.3E+02 0.0029 34.4 11.3 75 146-220 106-197 (536)
32 PF12022 DUF3510: Domain of un 51.9 49 0.0011 32.3 7.0 56 666-721 22-78 (125)
33 KOG4603 TBP-1 interacting prot 49.7 1.7E+02 0.0037 30.3 10.3 68 70-164 98-165 (201)
34 PF11547 E3_UbLigase_EDD: E3 u 49.7 22 0.00049 28.9 3.4 30 810-839 7-40 (53)
35 KOG0412 Golgi transport comple 49.3 6.4E+02 0.014 31.7 57.5 191 15-213 13-218 (773)
36 KOG4182 Uncharacterized conser 49.2 5.4E+02 0.012 30.8 17.2 80 110-193 107-187 (828)
37 PF06008 Laminin_I: Laminin Do 42.3 4.9E+02 0.011 28.4 14.3 23 170-192 120-142 (264)
38 PF06419 COG6: Conserved oligo 38.2 5E+02 0.011 32.2 14.3 163 603-787 336-511 (618)
39 cd07674 F-BAR_FCHO1 The F-BAR 37.2 5.9E+02 0.013 27.8 13.5 44 152-195 165-208 (261)
40 PF10516 SHNi-TPR: SHNi-TPR; 36.9 27 0.00058 27.1 2.0 21 147-167 11-31 (38)
41 PF09726 Macoilin: Transmembra 36.5 2E+02 0.0044 36.2 10.6 107 35-148 547-656 (697)
42 KOG0972 Huntingtin interacting 35.7 4.3E+02 0.0092 29.7 11.4 88 6-105 232-319 (384)
43 KOG4451 Uncharacterized conser 34.6 50 0.0011 35.3 4.2 118 5-137 14-131 (286)
44 cd07657 F-BAR_Fes_Fer The F-BA 33.1 6.6E+02 0.014 27.2 15.1 51 33-83 65-115 (237)
45 PF03670 UPF0184: Uncharacteri 30.4 53 0.0011 30.0 3.1 41 32-83 32-72 (83)
46 PF05837 CENP-H: Centromere pr 30.3 38 0.00082 32.1 2.3 40 632-673 58-97 (106)
47 PRK04778 septation ring format 28.1 7.9E+02 0.017 30.1 13.7 83 109-193 408-492 (569)
48 KOG0780 Signal recognition par 26.4 1.4E+02 0.0031 34.8 6.3 58 17-84 282-339 (483)
49 cd07653 F-BAR_CIP4-like The F- 25.7 8.4E+02 0.018 26.1 13.3 42 33-74 65-106 (251)
50 KOG3771 Amphiphysin [Intracell 25.5 6.1E+02 0.013 30.3 11.3 33 310-342 171-203 (460)
51 cd07673 F-BAR_FCHO2 The F-BAR 24.8 9.1E+02 0.02 26.6 12.2 48 150-197 170-217 (269)
52 PRK03947 prefoldin subunit alp 24.4 5.8E+02 0.012 25.0 9.6 46 33-79 6-51 (140)
53 PRK14011 prefoldin subunit alp 23.5 4.6E+02 0.0099 26.4 8.7 44 34-78 4-47 (144)
54 cd07671 F-BAR_PSTPIP1 The F-BA 23.5 9.7E+02 0.021 26.0 15.2 48 150-197 173-220 (242)
55 PF12162 STAT1_TAZ2bind: STAT1 22.9 68 0.0015 22.3 1.8 17 806-822 6-22 (23)
56 PF04212 MIT: MIT (microtubule 21.8 2.1E+02 0.0045 24.4 5.2 18 150-167 18-35 (69)
57 KOG1924 RhoA GTPase effector D 21.5 1E+03 0.022 30.5 12.3 144 24-191 846-1001(1102)
58 cd02683 MIT_1 MIT: domain cont 21.4 2.3E+02 0.005 25.3 5.5 47 149-195 18-72 (77)
59 PF00515 TPR_1: Tetratricopept 21.1 79 0.0017 22.5 2.1 21 147-167 11-31 (34)
60 cd07610 FCH_F-BAR The Extended 20.6 8.9E+02 0.019 24.5 11.1 40 34-73 58-97 (191)
61 PRK14082 hypothetical protein; 20.6 1.8E+02 0.0039 25.4 4.3 50 179-228 8-64 (65)
62 PF13176 TPR_7: Tetratricopept 20.4 83 0.0018 23.3 2.1 20 147-166 9-28 (36)
63 PF04091 Sec15: Exocyst comple 20.3 2.2E+02 0.0047 32.2 6.4 69 675-754 39-111 (311)
No 1
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.4e-114 Score=994.10 Aligned_cols=761 Identities=46% Similarity=0.681 Sum_probs=644.7
Q ss_pred cccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCC
Q 002631 11 EKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEG 90 (898)
Q Consensus 11 ~~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~ 90 (898)
...|+.+++|+|+|||.+.|+++||+||+.|...|+++.+.+++.-+.||++||+.||.|++|+++++.++++.+.+..+
T Consensus 162 ~~~Dl~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~~~fi~~~dtl~~i~~kLe~~e~~~~g 241 (934)
T KOG2347|consen 162 TSVDLRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNFDSFISCKDTLDNIHQKLERGEEDPHG 241 (934)
T ss_pred cccccccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcchhHHHHHHHHHHHHHHHHhccccCccc
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred CCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhccc
Q 002631 91 SGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPS 170 (898)
Q Consensus 91 ~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~~ 170 (898)
++|.+|.+.|+++.+.++.+|.+|++|++|||++|+++++|+||+||||||++++++|++|+|+.+++||.|||+++..+
T Consensus 242 s~t~~l~n~i~~~~s~ad~iF~~vl~Rk~~ADstRsvL~~lqRfkfLFnLp~~ier~i~kGeYd~vvndYekAKsl~~~t 321 (934)
T KOG2347|consen 242 SGTTKLENCIKNSTSRADLIFEDVLERKDKADSTRSVLGVLQRFKFLFNLPSNIERSIKKGEYDTVVNDYEKAKSLFGKT 321 (934)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcchhhhhHhhcCCceeeccchhhHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHHHHhHHHHHHHH
Q 002631 171 HVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARM 250 (898)
Q Consensus 171 ~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~~s~~e~~~~I~lLleL~~~~dPiw~~L~~q~~~I~~~l~~~~~~~~~~~ 250 (898)
++++|+++++|||+.|+.||..|+++|.+++.+.++++++|++|.+|++.+||+|+||..|+++|...++.|...|++++
T Consensus 322 ~v~~Fkk~l~Eve~~m~~~k~~l~~kli~~p~t~~dq~~~ir~L~~L~~~~dP~wq~I~~q~k~i~~L~~s~~~~~~~~l 401 (934)
T KOG2347|consen 322 EVNLFKKVLEEVEKRMQSFKETLYRKLIDTPITFEDQSKLIRYLSELEPESDPVWQCIGVQNKRILGLLESCWDDHVARL 401 (934)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhCcccCchhhhccccchHHHhhhhhcchhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHhhhhhHHHHHHHHhhccCCCcccccccCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 002631 251 ETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVA 330 (898)
Q Consensus 251 e~l~~~l~~~~~s~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ev~~l~~~fv~~L~~vil~~lp~fWkla 330 (898)
+.++ + ++ +|.+.++.+...+.-++....+.- +. ....++.+....+++||++||+++++++|.|||+|
T Consensus 402 ~~~~--~-----~~-~~~q~s~~g~~~S~t~s~~~~~~~---q~-~~~~~~~~k~~~r~~fiekL~~l~~s~lP~fWKl~ 469 (934)
T KOG2347|consen 402 EGLR--L-----SD-KWTQPSQNGVHLSDTASSMENSQN---QV-INEWKIREKTPERVNFIEKLTDLLLSQLPIFWKLA 469 (934)
T ss_pred hccc--c-----cc-cccchhhcccccCchHHHHhhhhh---hh-ccchhhhhhchHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 9875 1 33 666555544221111111111100 11 11234445555688999999999999999999999
Q ss_pred HHhhcC-cccccccCCccccccccCchhhhh--hccCccccccHHHHHHHHHHHHHHHHHHhhhhccCCCcCccchHHHH
Q 002631 331 LSVFSG-KFAKSSQVSSESNLNASGNKAEEK--VGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMR 407 (898)
Q Consensus 331 qs~~~G-~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~mi~~~i~~y~~~v~~~f~~l~~~n~~~~yL~ 407 (898)
++|++| +|....+.. .+..++.+.. +....+..|++.++..|.+-.++.|..+...-|.+.|......|||+
T Consensus 470 ~sy~~G~~~~~~sq~~-----~s~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t~s~~~~~a~~~~~~~dis~~~~~~~~ 544 (934)
T KOG2347|consen 470 ISYFNGDLFSPSSQVQ-----DSDINKMEQNNEVREKREVFHSLVELALMDRFTLSQSDGKAKSPFGDADISRSLLPWMP 544 (934)
T ss_pred HHHhcccccCcccccC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccCCcCCcccccccCccch
Confidence 999999 554444332 1223333322 12234567888899999998888888888877766655444458999
Q ss_pred HHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---cccccccccccccCCCCCCcccc
Q 002631 408 DAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS---KDETWIPVSILERNKSPYTISYL 484 (898)
Q Consensus 408 ~~l~~v~~~~~~L~~~~~~p~~~~~~l~~L~~~~r~~~v~~lca~~~~~ae~~~---~lEdW~~~~~~e~~~~~~~iT~L 484 (898)
++++.|+.+|++|+.+..+|..+++-|+.|+.+ .++.|+|+|++..+|.|+ ..|+|+++...+++ .++|+|
T Consensus 545 ~~i~~vr~~~~sL~ale~~P~~~lq~Iq~li~~---~rl~~~~~~~~~~~e~is~l~~re~W~~~s~~~rn---~s~t~L 618 (934)
T KOG2347|consen 545 LAIKTVRKACQSLEALESLPHDALQPIQKLITE---ARLQCLSSWMRASTERISTLAKRETWIPDSILERN---RSITYL 618 (934)
T ss_pred hHHHHhHHHHHHHHHhhhChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcc---cchhhh
Confidence 999999999999999977998788888887777 788889999999999999 79999999777876 579999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhhhccCCcccc-----
Q 002631 485 PLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQ----- 559 (898)
Q Consensus 485 P~~Fe~~i~~~m~~i~~~~~~~~~E~~~~~dv~~~l~~~~~~Vr~~f~~~~~~f~~~le~l~~~~~~~~~~~e~~----- 559 (898)
|.+||++|+++|+.+..++.+..+|... +. ...|+++|...+++...+|..|+|+++.-.++-. -|.+.
T Consensus 619 P~~fEt~ivssl~q~~~~~l~~~gEa~~----f~-~~~~~~~i~el~I~~~~~fl~c~e~L~~h~~~~~-~~~~q~~t~~ 692 (934)
T KOG2347|consen 619 PLAFETVIVSSLEQVNSVLLSFEGEAAL----FE-QPDMQAEIEELSISVRLAFLNCFEDLAIHLEQIG-ADLSQLTTQI 692 (934)
T ss_pred hHHHHHHHhhhHHhhhhHHhhccccccc----cC-chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC-Cchhhccccc
Confidence 9999999999999999998776666653 33 2455666666666666666666666664111100 01111
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCCceeeeeecchhHHHhhhHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHH
Q 002631 560 HLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEE 639 (898)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~RLLltLSN~~~l~~~~ip~L~~~fe~~f~~~~~~~~~~~~i~~~~~~l~qLd~ 639 (898)
-.|+++....++.++.+.++.+++|++|||+||||++||+....|.|.+.|+.-|--..+ -+.+....+++|+.
T Consensus 693 ~~~~~~~~~~qed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~~~~~~k------~iE~is~s~s~l~s 766 (934)
T KOG2347|consen 693 EGQNGFSNAHQEDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYTWLLSRK------NIEDISMSLSGLGS 766 (934)
T ss_pred ccccccccccchhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHHhhcccc------cHHHHHHHHHHHHH
Confidence 013444444445555556677889999999999999999999999999999765544322 33334567999999
Q ss_pred HHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH
Q 002631 640 KVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFL 719 (898)
Q Consensus 640 ~Lfe~Y~~~k~~~L~~~I~~gil~~g~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV~~ia~~Lv~rvLs~Lve~va~elL 719 (898)
+||+.||+.|+++|+++++||||.+||+|..+|+|++||+|++|+|++||+|||||+++||+|+++||..+++.++++|+
T Consensus 767 ~l~e~Yi~~k~~~i~~alEp~~~~~~~~W~~~~~~~~irdYa~E~l~~lV~VhaEvf~iap~Ll~kiL~~~ve~i~d~L~ 846 (934)
T KOG2347|consen 767 KLFENYIEDKADPIRGALEPYLLDGGIQWGMAPPVKGIRDYAKEALHNLVAVHAEVFAIAPQLLDKILGETVEGISDELL 846 (934)
T ss_pred HHHHHHHHHhhhhhhhcccchhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhcccc-ccccCchhhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHHHHHHhHHHhhhcCCCCCCCCCCCCch
Q 002631 720 SLFDENQSNN-LKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSED 798 (898)
Q Consensus 720 ~~f~~~~~~~-v~~f~~~G~lQAtLDiefl~~tL~~Y~t~~A~~~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 798 (898)
++|+ | |++|+.+|.+|+++|||||+++|++|.|+.|++.|++ |.|..++.+.+ +++|+.++
T Consensus 847 ~l~~-----~~v~s~S~nG~lQi~vdl~~l~~~l~~Ylt~~a~~slkq--------ale~l~~~~~g-----~dtr~lee 908 (934)
T KOG2347|consen 847 RLFS-----CDVQSFSANGALQIMVDLEYLEDVLGPYLTKDAKESLKQ--------ALEALSECLSG-----GDTRRLEE 908 (934)
T ss_pred HHhh-----hhhhccCCCcceeeeeeHHHHHHHHHHhccHHHHHHHHH--------HHHHhhhhccC-----cchhhHHH
Confidence 9997 6 9999999999999999999999999999999999995 88888888888 59999999
Q ss_pred hhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhcch
Q 002631 799 ALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINT 838 (898)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (898)
...+++++ ..|+.||. .++++||+|+
T Consensus 909 ~ln~~k~s---------m~l~Lqc~-----~a~~~t~~~t 934 (934)
T KOG2347|consen 909 CLNDDKQS---------MRLQLQCF-----QALEDTRFNT 934 (934)
T ss_pred HHHHhhHH---------HHHHHHHH-----HHhhhhhcCC
Confidence 99999998 67899996 7899999985
No 2
>PF15469 Sec5: Exocyst complex component Sec5
Probab=100.00 E-value=3.5e-39 Score=329.91 Aligned_cols=179 Identities=42% Similarity=0.720 Sum_probs=171.1
Q ss_pred hHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCC-CCCCCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 002631 53 TQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEED-PEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGML 131 (898)
Q Consensus 53 ~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~-~~~~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L 131 (898)
+++||+||++||++||+||+|||+||.+|+.++.. .++.++..|++.|+++...++.++.||+++++|++++++++++|
T Consensus 1 s~~lk~LV~~Nf~~Fv~~k~tid~i~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~pll~~~~k~~~l~~~l~~l 80 (182)
T PF15469_consen 1 SEDLKSLVKENFDKFVSCKDTIDDIYEEFRNMKTEAQQDSGTEKLEESLNEASSKANSVFKPLLERREKADKLRNALEFL 80 (182)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999986543 33467899999999999999999999999999999999999999
Q ss_pred HHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhccc--chhHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHH
Q 002631 132 QRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPS--HVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLEN 209 (898)
Q Consensus 132 ~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~~--~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~~s~~e~~~ 209 (898)
+|++|||+||++|++||++|||++||++|.||++++... ++++|++||.|||++|++||+.||++|.+++.+.+++++
T Consensus 81 ~r~~flF~LP~~L~~~i~~~dy~~~i~dY~kak~l~~~~~~~~~vf~~v~~eve~ii~~~r~~l~~~L~~~~~s~~~~~~ 160 (182)
T PF15469_consen 81 QRNRFLFNLPSNLRECIKKGDYDQAINDYKKAKSLFEKYKQQVPVFQKVWSEVEKIIEEFREKLWEKLLSPPSSQEEFLK 160 (182)
T ss_pred HHHHHHHHhHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 999999999999999999999999999999999999877 999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCChHHHHHHHh
Q 002631 210 TVRLLLELEPESDPVWHYLNVQ 231 (898)
Q Consensus 210 ~I~lLleL~~~~dPiw~~L~~q 231 (898)
+|++|++|++++||||+||.+|
T Consensus 161 ~i~~Ll~L~~~~dPi~~~l~~q 182 (182)
T PF15469_consen 161 LIRKLLELNVEEDPIWYWLESQ 182 (182)
T ss_pred HHHHHHhCCCCCCHHHHHHHcC
Confidence 9999999999999999999875
No 3
>KOG2346 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.2e-36 Score=334.55 Aligned_cols=549 Identities=17% Similarity=0.247 Sum_probs=377.0
Q ss_pred cccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCC
Q 002631 11 EKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEG 90 (898)
Q Consensus 11 ~~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~ 90 (898)
...++++++|||+.||.++.+++++++|++.+..|.++|+.+|++||+||||||||||+|+|||++|+++|.+|+.+|.+
T Consensus 24 sptDlngahFDpEvyldkL~REcpLaqLidsetdMV~qIRaLDSDmqtLVYENYNKFisATdTirkmk~~f~~me~eMd~ 103 (636)
T KOG2346|consen 24 SPTDLNGAHFDPEVYLDKLPRECPLAQLIDSETDMVQQIRALDSDMQTLVYENYNKFISATDTIRKMKSNFFGMEQEMDG 103 (636)
T ss_pred CccccCCCCCCHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHhchHHHHHHHhhcchhhhcchHHHHHHhhhhhhcchhhh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhh-hhcc
Q 002631 91 SGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKS-IALP 169 (898)
Q Consensus 91 ~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~-L~~~ 169 (898)
|+++|..|++.+.++...|.|+++.+.++-....++.+.+|+|+||.+|++|++.+.|..+++.|..|.. +-+|
T Consensus 104 -----L~~~ms~i~~~s~~l~g~L~ekre~I~kLg~~~~llrkvqfifdLP~rLrkc~~~~aYG~avR~~~~A~~~L~qY 178 (636)
T KOG2346|consen 104 -----LEEVMSSIQSKSDGLAGSLFEKRELIKKLGQRPPLLRKVQFIFDLPRRLRKCGRAPAYGAAVRGSSEATGKLRQY 178 (636)
T ss_pred -----HHHHHHHHhhhhccccchhHHhHHHHHHhcCCccchhhhHHHhhhHHHHHHhccccccchhhccccccccchhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 4578
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHhcCCCCCChHH-HHHHHhHHHHHHHHHHhHHHHHH
Q 002631 170 SHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVW-HYLNVQNHRIRGLFEKCTLDHEA 248 (898)
Q Consensus 170 ~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~~s~~e~~~~I~lLleL~~~~dPiw-~~L~~q~~~I~~~l~~~~~~~~~ 248 (898)
.+.|.|+-+...+++|+..+-+.|..||.++..+.....+++.+|+.||.+.|-.- .+|.+....|
T Consensus 179 ~~~psfq~~~~~seei~~rl~~qL~~rlr~~~sga~~raEAv~LLl~lg~p~del~~~lL~~~eqsL------------- 245 (636)
T KOG2346|consen 179 DGRPSFQEDDVPSEEIRLRLVAQLGTKLRSDSSGAQARAEAVVLLLQLGVPVDELKAKLLEKLEQSL------------- 245 (636)
T ss_pred CCCCcHHHhccchHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHhcCCChHHHHHHHHHHHhccc-------------
Confidence 88999999999999999999999999999999999999999999999977644333 2222211110
Q ss_pred HHHHHhHHHHHhhhhhHHHHHHHHhhccCCCcccccccCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhhcchhHHH
Q 002631 249 RMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWK 328 (898)
Q Consensus 249 ~~e~l~~~l~~~~~s~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ev~~l~~~fv~~L~~vil~~lp~fWk 328 (898)
..|+ -. ++. -..|+.+++++-..+
T Consensus 246 --DvL~--------------------~~-------------------d~~---------~s~fv~~l~s~a~t~------ 269 (636)
T KOG2346|consen 246 --DVLQ--------------------IK-------------------DEE---------ASTFVEDLDSSADTE------ 269 (636)
T ss_pred --hhhe--------------------ee-------------------ccc---------ccccccchhhhhhhh------
Confidence 1110 00 000 013555555542222
Q ss_pred HHHHhhcCcccccccCCccccccccCchhhhhhccCccccccHHHHHHHHHHHHHHHHHHhhhhccCCCcCcc--c----
Q 002631 329 VALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNI--L---- 402 (898)
Q Consensus 329 laqs~~~G~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~mi~~~i~~y~~~v~~~f~~l~~~n~--~---- 402 (898)
++-. .+.. + ......++...||..=. .| +.+.... +
T Consensus 270 -----~alv----~~~~---------------~-----~e~~~~d~S~~vRAldr--------~f-r~s~~r~~~~a~~l 311 (636)
T KOG2346|consen 270 -----SALV----HPAK---------------I-----HEDAVRDFSEAVRALDR--------IF-RDSEERLFKLARAL 311 (636)
T ss_pred -----hhhh----hhhh---------------h-----hhccccchHHHHHHHHH--------Hc-ccccchHHHhhhhh
Confidence 1100 0000 0 00001133344443221 12 1111110 0
Q ss_pred hHHHHHHHHHHH--HHHHhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCCC
Q 002631 403 RSYMRDAIEEIS--KACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYT 480 (898)
Q Consensus 403 ~~yL~~~l~~v~--~~~~~L~~~~~~p~~~~~~l~~L~~~~r~~~v~~lca~~~~~ae~~~~lEdW~~~~~~e~~~~~~~ 480 (898)
.+-+++.+..+. .|...| +...+-++.++.++|..++..+.+ .|+
T Consensus 312 ~~~~~el~~~v~~~e~~l~l-------~ri~~~f~~~L~evr~ali~~L~s-------------~~~------------- 358 (636)
T KOG2346|consen 312 TAMLPELLLSVLLRECFLIL-------NRIYQDFRQLLDEVRGALIKDLIS-------------GWI------------- 358 (636)
T ss_pred HHhhHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH-------------HHH-------------
Confidence 111111111111 011111 122223333333333222221100 110
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhhhccCCccccc
Q 002631 481 ISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQH 560 (898)
Q Consensus 481 iT~LP~~Fe~~i~~~m~~i~~~~~~~~~E~~~~~dv~~~l~~~~~~Vr~~f~~~~~~f~~~le~l~~~~~~~~~~~e~~~ 560 (898)
-.+. ++|.. +++..+-=.+++-
T Consensus 359 ------------q~~~--------------------------------~~~k~---sLaa~~Lfta~~v----------- 380 (636)
T KOG2346|consen 359 ------------QKGS--------------------------------QDFKR---SLAAQFLFTAGKV----------- 380 (636)
T ss_pred ------------HHHH--------------------------------HHHHH---HHHHHHHHhcccc-----------
Confidence 0011 11111 1122111111110
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCCceeeeeecchhHHHhhhHHHHHHHHHhhccccccccccc------ccHHHHHHHH
Q 002631 561 LQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEG------TDIQDLVMSF 634 (898)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~RLLltLSN~~~l~~~~ip~L~~~fe~~f~~~~~~~~~~------~~i~~~~~~l 634 (898)
+.++. + .+.+..+.+.+|++++..++.+...++|++.+.--..|.. +..+. -+.-+++.++
T Consensus 381 ----sfsN~--p----~~~~S~~~hegLiv~~~~~~li~~~~~~~~~~~~a~y~l~---l~~eqF~~~p~~~v~~lc~~~ 447 (636)
T KOG2346|consen 381 ----SFSND--P----EGKSSDKIHEGLIVVLAQLSLIEQKVIPRVTEEIAAYFLG---LNSEQFENGPAFIVGELCRVF 447 (636)
T ss_pred ----ccccC--C----CcccccchhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHhcCCCcchHHHHHHH
Confidence 00000 0 0111335578899888888888888998887654333221 11100 1233455556
Q ss_pred HHHHHHHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhhcchh-------------
Q 002631 635 SGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKP------------- 701 (898)
Q Consensus 635 ~qLd~~Lfe~Y~~~k~~~L~~~I~~gil~~g~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV~~ia~~------------- 701 (898)
. -.+|++.|++..+-.++.++++.+.. -+|.....|.+||.||.-.+..|-.|-.||.-+-|.
T Consensus 448 r--a~kLl~hY~~~~gl~vs~~LrK~~~t--~~w~~~~epr~vra~v~r~vee~~~~d~ev~lll~~~rK~k~s~~~~~~ 523 (636)
T KOG2346|consen 448 R--AEKLLQHYIDTRGLKVSVLLRKRFKT--PNWVKHKEPREVRAYVDRFVEELEEVDKEVKLLLPQFRKHKRSGSNKMA 523 (636)
T ss_pred H--HHHHHHHHHhhcchhHHHHHHHHhcC--CccccccccchHHHHHHHHHHHHHHHhHHHHHhccccccccccCccccc
Confidence 6 88999999999999999999998875 699999999999999999999999999999654432
Q ss_pred ---hHH---------H---------HHHHHHHHHHHHHHHhhhhhccccccccCchhhHHHHhhHHHHHHhhcccCChhH
Q 002631 702 ---LLD---------K---------TLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDA 760 (898)
Q Consensus 702 ---Lv~---------r---------vLs~Lve~va~elL~~f~~~~~~~v~~f~~~G~lQAtLDiefl~~tL~~Y~t~~A 760 (898)
++. | .-.+++..+..-+|+.|.++ ++++.||.-|+.|..+|+.|++..|..++.+++
T Consensus 524 ~~t~l~t~~~kLf~erid~f~~veFn~~SvvT~ivK~~LK~l~E~--vRLqTf~rfG~qQvQvDc~fLq~~L~~~V~DE~ 601 (636)
T KOG2346|consen 524 RSTLLETHLAKLFKERIDIFTKVEFNQESVVTTIVKLCLKSLQEY--VRLQTFNRFGFQQVQVDCQFLQAPLKEAVEDEA 601 (636)
T ss_pred hhHHHHHHHHHHHHHHhhhhceeeecchhhhHHHHHHHHHHHHHH--HHHHhhcccceeeeehhHHHHHHHHHHHhchHH
Confidence 111 1 12356778888899999886 468999999999999999999999999997764
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhh
Q 002631 761 RESLKNLQGVLLEKATVSVAEAV 783 (898)
Q Consensus 761 ~~~~~~l~~~~~~~~~e~~~~~~ 783 (898)
.+..+.|+++..|.++--+-|
T Consensus 602 --~v~~llDevi~sA~~RC~Dpv 622 (636)
T KOG2346|consen 602 --AVDFLLDEVIVSASERCLDPV 622 (636)
T ss_pred --HHHHHHHHHHHHHHHcCCCCc
Confidence 577788999999988765443
No 4
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [].
Probab=99.23 E-value=6.9e-10 Score=124.68 Aligned_cols=204 Identities=16% Similarity=0.270 Sum_probs=169.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHHHhh
Q 002631 31 QNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRA 110 (898)
Q Consensus 31 ~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a~~i 110 (898)
.+.++++|......|..++...+.+++.|-.+||.-||.+++++..+..++...... +..|...+.+....+...
T Consensus 5 ~s~~l~~L~~Ep~~L~~~~~~l~~ql~~La~~~y~~fi~~~~~~~~i~~~~~~~~~~-----l~~L~~~l~~L~~~~~~f 79 (338)
T PF04124_consen 5 TSLSLESLFSEPQSLSEEIASLDAQLQSLAFRNYKTFIDNAECSSDIRQELSSLSDS-----LDSLLDSLPELDEACQRF 79 (338)
T ss_pred ccCCHHHHHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999998765332 334666666665555544
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhh-cccchhHHHHHHHHHHHHHHHH
Q 002631 111 FEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIA-LPSHVNILKRVLEEVEKVMQEF 189 (898)
Q Consensus 111 ~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~-~~~~v~vf~kV~~EVe~ii~~~ 189 (898)
........++..+...+++-..+...+++||.-|..||.+|.|++|.+-+.-+++|. .+.+.+++++|+.||+..+..+
T Consensus 80 ~~~~~~~~~~r~~~~~~l~~~~~l~diLElP~Lm~~ci~~g~y~eALel~~~~~~L~~~~~~~~lv~~i~~ev~~~~~~m 159 (338)
T PF04124_consen 80 SSKAQKISEERKKASLLLENHDRLLDILELPQLMDTCIRNGNYSEALELSAHVRRLQSRFPNIPLVKSIAQEVEAALQQM 159 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcccHhhHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Confidence 444444444455567778888999999999999999999999999999999999986 4567999999999999999999
Q ss_pred HHHHHHhccCCCCChhHHHHHHHHHhcCCC-CC-ChHHHHHHHhHHHHHHHHH
Q 002631 190 KAMLYKSMEDPHIDLTNLENTVRLLLELEP-ES-DPVWHYLNVQNHRIRGLFE 240 (898)
Q Consensus 190 r~~L~~kL~~~~~s~~e~~~~I~lLleL~~-~~-dPiw~~L~~q~~~I~~~l~ 240 (898)
...|.++|..+ .......++|.+|-.++. ++ ..-..||.++..|+.+.++
T Consensus 160 l~~Li~~L~~~-l~l~~~ik~v~~Lrrl~~~~e~~Lr~~fl~~r~~~l~~~l~ 211 (338)
T PF04124_consen 160 LSQLINQLRTP-LKLPACIKTVGYLRRLPVLTESELRLKFLQSRDSWLQSVLE 211 (338)
T ss_pred HHHHHHHHcCc-ccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhhhHH
Confidence 99999999888 778899999999999965 22 2467888888877777544
No 5
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].
Probab=98.90 E-value=3.5e-09 Score=95.61 Aligned_cols=71 Identities=17% Similarity=0.424 Sum_probs=68.1
Q ss_pred CCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhc
Q 002631 15 YFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE 85 (898)
Q Consensus 15 isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e 85 (898)
+++++|||+.|+....++.|..++.+-...|.++|+..+++||.+||+||..||.|.++|..|..++....
T Consensus 1 ~~~~~fd~~~~~~~~l~~~s~~~i~~~~~~L~~~i~~~~~eLr~~V~~nY~~fI~as~~I~~m~~~~~~l~ 71 (87)
T PF08700_consen 1 FDSENFDVDEYFKDLLKNSSIKEIRQLENKLRQEIEEKDEELRKLVYENYRDFIEASDEISSMENDLSELR 71 (87)
T ss_pred CCCCcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999997643
No 6
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]
Probab=98.20 E-value=0.033 Score=66.25 Aligned_cols=199 Identities=15% Similarity=0.195 Sum_probs=146.1
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHH
Q 002631 28 RVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQA 107 (898)
Q Consensus 28 ~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a 107 (898)
.+..+.|..++..-...++..|+.+.++|+++|-+-|--.|.|-|||..|++--.. |.+.|.++....
T Consensus 12 ~LFethsvsEIr~ve~~ir~~iE~KrEELRqmVGeRYRDLleAADtI~hM~sla~~------------L~~~I~~t~~nc 79 (863)
T KOG2033|consen 12 TLFETHSVSEIREVEKKIRSVIEGKREELRQMVGERYRDLLEAADTIRHMCSLADK------------LASDIANTRVNC 79 (863)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhhhh
Confidence 45567789999999999999999999999999999999999999999999865432 444444443222
Q ss_pred Hhhh------chHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhc-----c------c
Q 002631 108 NRAF------EPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL-----P------S 170 (898)
Q Consensus 108 ~~i~------~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~-----~------~ 170 (898)
..+. .|=+.-+. -...+..++.-+.|.|.++|..|..|+..+.+=.|..-|..++.+-. + .
T Consensus 80 rsL~a~svA~tp~raeqn--p~~e~~Yg~aaqVKyLv~~PE~IWg~lD~s~fl~At~ly~~~~Hlq~~liqLdsss~ll~ 157 (863)
T KOG2033|consen 80 RSLHANSVAKTPGRAEQN--PAGEHLYGTAAQVKYLVSSPELIWGHLDSSEFLDATVLYCMVEHLQKQLIQLDSSSMLLK 157 (863)
T ss_pred hhcccccccCCcchhhcC--chhhHHHHHHHHHHHHHhCHHHhhccccccchHHHHHHHHHHHHHHHHHhhcCCCcHHHh
Confidence 2222 22111111 23445677788999999999999999999999999999999887532 1 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHhcCCCCCCh---HHHHHHHhHHHHHHHHHH
Q 002631 171 HVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDP---VWHYLNVQNHRIRGLFEK 241 (898)
Q Consensus 171 ~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~~s~~e~~~~I~lLleL~~~~dP---iw~~L~~q~~~I~~~l~~ 241 (898)
+.|++.+=|.-++---.++.......|.++..+..-..+++.-++=|+ +.|| .-.||.+++.+|...++.
T Consensus 158 nfP~l~~Qw~a~r~F~stI~q~s~~~Lld~glsd~atvdaL~aiaLLd-esdpsqvLelFL~~Rk~~il~lLn~ 230 (863)
T KOG2033|consen 158 NFPALTNQWVATRPFHSTIEQQSCSTLLDIGLSDWATVDALAAIALLD-ESDPSQVLELFLEKRKEHILHLLND 230 (863)
T ss_pred hcHHHHHHHHHHhhHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 568888888888766667777777888888766654444444333332 2344 458999999999999984
No 7
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known.
Probab=98.13 E-value=0.00029 Score=77.89 Aligned_cols=192 Identities=9% Similarity=0.183 Sum_probs=152.2
Q ss_pred CCCCChHHHHHH-hcCC-CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCch
Q 002631 17 SDSFNAKLFLSR-VHQN-TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTA 94 (898)
Q Consensus 17 S~~Fdp~~fL~~-vH~~-tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~ 94 (898)
++.|||..|.-+ +-.. .+.+++......|....+.-+..+-..|-+|++.|+.+-..++++..++...-.. ..
T Consensus 10 ~~~FD~~~~~L~~l~~~~~~~~~i~~~~ekLs~~ldvVe~~L~~~I~~~s~~f~~a~~~v~el~~~l~~a~~~-----~~ 84 (291)
T PF10475_consen 10 DEDFDPVRYELEKLPEDELDLEDIEELQEKLSHYLDVVEKKLSREISEKSDSFFQAMSSVQELQDELEEALVI-----CK 84 (291)
T ss_pred CCCCCchHHHHHhCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH
Confidence 459999998544 4444 5788888889999999999999999999999999999999999999998764221 22
Q ss_pred hhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhc-ccchh
Q 002631 95 HLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL-PSHVN 173 (898)
Q Consensus 95 ~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~-~~~v~ 173 (898)
.+...|+.+......---.|+....|-+++..++..|+..+.+.+.=..|+..++.|||..|++-+...+.+.. ..+..
T Consensus 85 ~~R~~L~~~~~~~~~~~L~Il~~~rkr~~l~~ll~~L~~i~~v~~~~~~l~~ll~~~dy~~Al~li~~~~~~l~~l~~~~ 164 (291)
T PF10475_consen 85 NLRRNLKSADENLTKSGLEILRLQRKRQNLKKLLEKLEQIKTVQQTQSRLQELLEEGDYPGALDLIEECQQLLEELKGYS 164 (291)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcccch
Confidence 35556655544333334456677888899999999999999999999999999999999999999999988653 46778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC--CCChhHHHHHHHH
Q 002631 174 ILKRVLEEVEKVMQEFKAMLYKSMEDP--HIDLTNLENTVRL 213 (898)
Q Consensus 174 vf~kV~~EVe~ii~~~r~~L~~kL~~~--~~s~~e~~~~I~l 213 (898)
.++.+-..++.....+.+.|-..|... ..+++.+.+++..
T Consensus 165 c~~~L~~~L~e~~~~i~~~ld~~l~~~~~~Fd~~~Y~~v~~A 206 (291)
T PF10475_consen 165 CVRHLSSQLQETLELIEEQLDSDLSKVCQDFDPDKYSKVQEA 206 (291)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 888888888888888888777777665 3445566666664
No 8
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.13 E-value=0.054 Score=65.82 Aligned_cols=129 Identities=12% Similarity=0.183 Sum_probs=96.1
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHH
Q 002631 25 FLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVS 104 (898)
Q Consensus 25 fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~ 104 (898)
||..+.-.- +...-.+.|+..|+.++.++..+-..||.-||.+-+-+.+|+++.++....+.+ +...++++.
T Consensus 36 ~lRs~~d~~---~~~~~~e~Le~~ir~~d~EIE~lcn~hyQdFidsIdEL~~Vr~daq~Lks~vsd-----~N~rLQ~~g 107 (800)
T KOG2176|consen 36 TLRSVYDGN---QHKPVMEKLENRIRNHDKEIEKLCNFHYQDFIDSIDELLKVRGDAQKLKSQVSD-----TNRRLQESG 107 (800)
T ss_pred HHHHHHccC---CcchHHHHHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHH
Confidence 444444443 445566778888999999999999999999999999999999998876554433 333343332
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHH
Q 002631 105 SQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYK 161 (898)
Q Consensus 105 ~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~ 161 (898)
..=-.....|..++....++..+.+.++..=-+.++-+++++.+++|.|=.|.+.-.
T Consensus 108 ~eLiv~~e~lv~~r~~~rnit~ai~~l~~Cl~vLEl~sK~~e~~s~kqyy~aLktle 164 (800)
T KOG2176|consen 108 KELIVKKEDLVRCRTQSRNITEAIELLTLCLPVLELYSKLQEQMSEKQYYPALKTLE 164 (800)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 222224446677777778899999999999999999999999999999966655433
No 9
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.75 E-value=0.0013 Score=76.85 Aligned_cols=187 Identities=17% Similarity=0.219 Sum_probs=135.0
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHH
Q 002631 24 LFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGV 103 (898)
Q Consensus 24 ~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i 103 (898)
.|+.+. ..+.+++|.+.-..|..++...+++++.|--.||..||.+-..+++++.++..++.+-.+ |.-.+.+.
T Consensus 23 ~~v~~l-~~~~~e~l~ke~~~La~e~~~i~~q~q~La~~ny~t~id~A~~~~~i~~~~~~~~~~~~~-----l~l~~~~L 96 (581)
T KOG2069|consen 23 AYVREL-TTKPLEELRKEKALLAEEAAKIDAQTQDLARDNYKTLIDTARNTDAIYQLFGRSRHDLKE-----LSLQLPEL 96 (581)
T ss_pred HHHHHH-cCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHH-----HHHhhHHh
Confidence 466664 356799999999999999999999999999999999999999999999999887654221 22122222
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhc-ccchhHHHHHHHHH
Q 002631 104 SSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL-PSHVNILKRVLEEV 182 (898)
Q Consensus 104 ~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~-~~~v~vf~kV~~EV 182 (898)
.+..++.-.-.-+.+++-.--+.++........+.+||..|-+||+.|.|+.+.+--.-+.+|.. ....++++++-.+|
T Consensus 97 ~s~~~~f~~~~~~i~e~~~~~~~~l~~~~~l~ellelp~lM~~cir~~~~~ealel~a~~~RL~~~~~~~pvi~~i~~~v 176 (581)
T KOG2069|consen 97 TSPCKRFQDFAEEISEHRRLNSLTLDKHPQLLELLELPQLMDRCIRNGYYDEALELAAYASRLKQRFGTIPVIQEIATEV 176 (581)
T ss_pred hhHHHHHHHHHHHhhHhHHHHHHHHhhcchhHHHHhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 21111111111111222222334555556677899999999999999999999887777777754 34669999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCChhHHHHHHHHHhcC
Q 002631 183 EKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLEL 217 (898)
Q Consensus 183 e~ii~~~r~~L~~kL~~~~~s~~e~~~~I~lLleL 217 (898)
+..+..+-..|..+|..+-. .-++-+.|.+|-..
T Consensus 177 ~~tv~~ll~qL~~~l~~pl~-l~~cirvv~ylr~~ 210 (581)
T KOG2069|consen 177 EQTVQKLLEQLIQQLRTPLQ-LPECIRVVGYLRRM 210 (581)
T ss_pred HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHH
Confidence 99999999999999988732 44555666666443
No 10
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=97.72 E-value=0.0059 Score=70.18 Aligned_cols=208 Identities=13% Similarity=0.264 Sum_probs=139.3
Q ss_pred CCCChHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-------hHHhHhhHHHHHHHHhhhhcCCCC
Q 002631 18 DSFNAKLFLSRVHQN-TSSADLEAGALALKTDLKGRTQQRKQLVKDNFD-------CFVSCKTTIDDIESKLKRIEEDPE 89 (898)
Q Consensus 18 ~~Fdp~~fL~~vH~~-tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~-------kFI~akdTId~m~~~~~~~e~~~~ 89 (898)
++|||-.|+.++.++ .|+.+|-.-...+...|..++.++...|.+--. .+-.++..|.++..++.......+
T Consensus 2 ~dfdpv~~in~lfp~e~SL~~ld~~i~~l~~~i~~ld~eI~~~v~~q~~~~~~~~~~l~~a~~~i~~L~~~i~~ik~kA~ 81 (383)
T PF04100_consen 2 PDFDPVDYINELFPDEQSLSNLDELIAKLRKEIRELDEEIKELVREQSSSGQDAEEDLEEAQEAIQELFEKISEIKSKAE 81 (383)
T ss_pred CCCCHHHHHHHhCCChHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999985 578889899999999999999999999987652 234444555555544444321100
Q ss_pred CCCchhhHhhHHHHHHHHHhhhchH--HHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhh
Q 002631 90 GSGTAHLFKLMQGVSSQANRAFEPL--FERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIA 167 (898)
Q Consensus 90 ~~~t~~L~~~i~~i~~~a~~i~~pL--le~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~ 167 (898)
. =+..+.+ |-..+ |+... .+|-..+.+|+|++-|.+-=..|...+++++|..+..-+.-.+.|.
T Consensus 82 ~-----sE~~V~~-------it~dIk~LD~AK--rNLT~SIT~LkrL~MLv~a~~qL~~~~~~r~Y~e~a~~L~av~~L~ 147 (383)
T PF04100_consen 82 E-----SEQMVQE-------ITRDIKQLDNAK--RNLTQSITTLKRLQMLVTAVEQLKELAKKRQYKEIASLLQAVKELL 147 (383)
T ss_pred H-----HHHHHHH-------HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 0 0111111 11111 12222 3677889999999999999999999999999999999999988864
Q ss_pred ----cccchhHHHHHHHHHHHHHHHHHHHHHHhccCC-------CC--ChhHHHHHHHHHhcCCCC--CChHHHHHHHhH
Q 002631 168 ----LPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDP-------HI--DLTNLENTVRLLLELEPE--SDPVWHYLNVQN 232 (898)
Q Consensus 168 ----~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~-------~~--s~~e~~~~I~lLleL~~~--~dPiw~~L~~q~ 232 (898)
.|..++-+..++..|+.+-.+++.++..-+... .. ......++...+=-||+. ++.+.-|+..|-
T Consensus 148 ~~F~~yksi~~I~~L~~~i~~l~~~L~~qI~~df~~~f~~~~~~~~~~~~~~l~~aC~vvd~L~~~~r~~li~wf~~~qL 227 (383)
T PF04100_consen 148 EHFKPYKSIPQIAELSKRIDQLQNELKEQIFEDFEELFGSQGDESPGQSSQQLSDACLVVDALGPDVREELIDWFCNKQL 227 (383)
T ss_pred HHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchHhHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 567899999999999998888887777654322 11 122233333333333543 455555555555
Q ss_pred HHHHHHH
Q 002631 233 HRIRGLF 239 (898)
Q Consensus 233 ~~I~~~l 239 (898)
.-....+
T Consensus 228 ~eY~~iF 234 (383)
T PF04100_consen 228 KEYRRIF 234 (383)
T ss_pred HHHHHHH
Confidence 4444444
No 11
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.57 E-value=0.3 Score=57.31 Aligned_cols=195 Identities=16% Similarity=0.221 Sum_probs=113.1
Q ss_pred ccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCC
Q 002631 12 KLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGS 91 (898)
Q Consensus 12 ~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~ 91 (898)
+-.+.+++||.+.|++.....-++++|.+-| +-=.+.+..+|-.|+.+-|--||+-...+-.|-..+..++++-+.
T Consensus 25 k~eFmkedFdve~f~s~~R~~v~letLrddL---rlylksl~~aMieLIN~DYADFVnLStnLVgld~aln~i~qpL~q- 100 (705)
T KOG2307|consen 25 KTEFMKEDFDVERFMSLARQKVDLETLRDDL---RLYLKSLQNAMIELINDDYADFVNLSTNLVGLDDALNKIEQPLNQ- 100 (705)
T ss_pred hhhhccccCCHHHHHHHHhccCCHHHHHHHH---HHHHHHHHHHHHHHHhhhHHHHHhhhhhhccHHHHHHHHHhHHHH-
Confidence 3456689999999999999999999998754 455667788999999999999999888777777666666553211
Q ss_pred CchhhHhhHHHHHHHHHhhhchHHHHHHHH----------HHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHH
Q 002631 92 GTAHLFKLMQGVSSQANRAFEPLFERQAQA----------EKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYK 161 (898)
Q Consensus 92 ~t~~L~~~i~~i~~~a~~i~~pLle~r~Ka----------ekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~ 161 (898)
|.+-|..+...-..-...+.++.++. ..+..++..++|..-+.+=|.+=...++.-..+.+.-+.+
T Consensus 101 ----lreei~s~rgsV~ea~~alr~q~se~~~~Re~k~~lldl~~v~~~ieKL~k~L~s~psk~q~~~a~sLERiAleln 176 (705)
T KOG2307|consen 101 ----LREEIKSTRGSVGEAERALRQQCSELCSNREKKIELLDLIYVLVAIEKLSKMLLSPPSKEQQDGATSLERIALELN 176 (705)
T ss_pred ----HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccchHHHHHHHHH
Confidence 22222222111111111122222222 2233444455555555554444444455556777788888
Q ss_pred HhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhccCC-----CCChhHHHHHHHHHhcCC
Q 002631 162 KAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDP-----HIDLTNLENTVRLLLELE 218 (898)
Q Consensus 162 kak~L~~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~-----~~s~~e~~~~I~lLleL~ 218 (898)
+++...... ++-.+..++..|+..+..|.+.|.-. ...++.+.+|.+.-.-|+
T Consensus 177 qlkf~a~h~----k~~l~p~~e~ria~~~~~L~qsl~~lf~eglqsa~~~l~nclriYatld 234 (705)
T KOG2307|consen 177 QLKFHASHL----KGSLFPHSEERIAAEKIILSQSLAVLFAEGLQSAAGDLQNCLRIYATLD 234 (705)
T ss_pred HHHHHHHHh----hcccCcchhhHHhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHh
Confidence 877754322 22234445555555555554443211 224455666666544443
No 12
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells. These include cytoplasmic dynein targeting to Golgi and other membranes, and SNARE-mediated ER-Golgi trafficking [, ]. Dominant-negative ZW10, anti-ZW10 antibody, and ZW10 RNA interference (RNAi) cause Golgi dispersal. ZW10 RNAi also disperse endosomes and lysosomes []. Drosophila kinetochore components Rough deal (Rod) and Zw10 are required for the proper functioning of the metaphase checkpoint in flies []. The eukaryotic spindle assembly checkpoint (SAC) monitors microtubule attachment to kinetochores and prevents anaphase onset until all kinetochores are aligned on the metaphase plate. It is an essential surveillance mechanism that ensures high fidelity chromosome segregation during mitosis. In higher eukaryotes, cytoplasmic dynein is involved in silencing the SAC by removing the checkpoint proteins Mad2 and the Rod-Zw10-Zwilch complex (RZZ) from aligned kinetochores [, , ].; GO: 0007067 mitosis, 0000775 chromosome, centromeric region, 0005634 nucleus
Probab=97.53 E-value=0.44 Score=58.06 Aligned_cols=160 Identities=14% Similarity=0.225 Sum_probs=110.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCC----CchhhHhhHHHHHHHHH
Q 002631 33 TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGS----GTAHLFKLMQGVSSQAN 108 (898)
Q Consensus 33 tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~----~t~~L~~~i~~i~~~a~ 108 (898)
-+-++|......|.+.|+...++.+..|.+||..|+....+.+.+..+.+....+.++. ....+...+ .
T Consensus 7 l~~edl~~~I~~L~~~i~~~k~eV~~~I~~~y~df~~~~~~~~~L~~~~~~l~~eI~d~l~~~~~~~i~~~l-------~ 79 (593)
T PF06248_consen 7 LSKEDLRKSISRLSRRIEELKEEVHSMINKKYSDFSPSLQSAKDLIERSKSLAREINDLLQSEIENEIQPQL-------R 79 (593)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-------H
Confidence 46789999999999999999999999999999999988888777776655532221000 000011111 1
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhcc------cchhHHHHHHHHH
Q 002631 109 RAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALP------SHVNILKRVLEEV 182 (898)
Q Consensus 109 ~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~------~~v~vf~kV~~EV 182 (898)
.....+..-+.+.+....+++++++.+.+=++=..+...++.|+|..|++.-.+++.++.. .+..+++-+-.|.
T Consensus 80 ~a~~e~~~L~~eL~~~~~~l~~L~~L~~i~~~l~~~~~al~~~~~~~Aa~~L~~~~~~L~~l~~~~~~~~~i~~~Lk~e~ 159 (593)
T PF06248_consen 80 DAAEELQELKRELEENEQLLEVLEQLQEIDELLEEVEEALKEGNYLDAADLLEELKSLLDDLKSSKFEELKILKLLKDEY 159 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCcCcccccHHHHHHHHHH
Confidence 1222233334455555556666666666655558888999999999999999999997643 2457788887777
Q ss_pred HHHHHHHHHHH---HHhccC
Q 002631 183 EKVMQEFKAML---YKSMED 199 (898)
Q Consensus 183 e~ii~~~r~~L---~~kL~~ 199 (898)
...-+.+...| |+++..
T Consensus 160 ~~lr~~L~~~L~~~w~~lv~ 179 (593)
T PF06248_consen 160 SELRENLQYQLSEEWERLVQ 179 (593)
T ss_pred HHHHHHHHHHHHHHHHhhee
Confidence 77777777666 666644
No 13
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking. Subunit 5 is located in the smaller, B lobe, together with subunits 6-8, and has been shown to bind subunits 1 and 7 [].
Probab=97.26 E-value=0.0022 Score=62.80 Aligned_cols=113 Identities=18% Similarity=0.309 Sum_probs=81.2
Q ss_pred CCCCCChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCC
Q 002631 16 FSDSFNAKLFLSRVHQ-----NTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEG 90 (898)
Q Consensus 16 sS~~Fdp~~fL~~vH~-----~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~ 90 (898)
-+++|||..|.+.+.. +.+--++..-+..|...|+..+..++.+|.+|++..++-...+.....-+..+
T Consensus 4 l~~dFd~~~fan~ll~~~~~~~~~~ld~~~~l~kL~~~i~eld~~i~~~v~~~~~~LL~q~~~~~~~~~~l~~v------ 77 (132)
T PF10392_consen 4 LSPDFDPVQFANDLLKSTNNNSDSELDISTPLKKLNFDIQELDKRIRSQVTSNHEDLLSQASSIEELESVLQAV------ 77 (132)
T ss_pred CCCCCCHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHH------
Confidence 4899999999998888 44456788889999999999999999999999999999999999888855543
Q ss_pred CCchhhHhhHHHHHHHHHhhhchHHHHHHHH-------HHHHHHHHHHHHhHHhhcC
Q 002631 91 SGTAHLFKLMQGVSSQANRAFEPLFERQAQA-------EKIRSVQGMLQRFRTLFNL 140 (898)
Q Consensus 91 ~~t~~L~~~i~~i~~~a~~i~~pLle~r~Ka-------ekLr~vl~~L~r~kfLF~L 140 (898)
...+..+....+.+...|.+-.+++ +++..+..+|++--.++.|
T Consensus 78 ------~~~v~~L~~s~~RL~~eV~~Py~~~~~~~~~L~rl~~t~~LLR~~~r~l~L 128 (132)
T PF10392_consen 78 ------RSSVESLQSSYERLRSEVIEPYEKIQKLTSQLERLHQTSDLLRSVSRFLQL 128 (132)
T ss_pred ------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444 5555555555555554444
No 14
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.
Probab=97.22 E-value=0.0015 Score=73.10 Aligned_cols=141 Identities=14% Similarity=0.229 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhhcchh-hHHHHHHHHHH
Q 002631 634 FSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKP-LLDKTLGILVE 712 (898)
Q Consensus 634 l~qLd~~Lfe~Y~~~k~~~L~~~I~~gil~~g~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV~~ia~~-Lv~rvLs~Lve 712 (898)
-+.-|.+||+ -++.|.+-+.+++ .+||.+..+|++.++|+.+++..|-.+=+.+.+..|+ .-..+.-..+.
T Consensus 142 r~~Ae~~I~~-lv~~KIDe~lela-------~yDW~~~~~~~~ps~yi~dli~fL~~~f~s~l~~LP~~v~~~~~~~a~~ 213 (311)
T PF04091_consen 142 RKAAEKRIFE-LVNSKIDEFLELA-------EYDWTPTEPPGEPSDYINDLIQFLETTFSSTLTNLPPSVKQLVYFSACD 213 (311)
T ss_dssp TTHHHHHHHH-HHHHHHHHHHTT---------TT--------S--HHHHHHHHHHHHHHHTTTTTSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHhhc-------ccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3455666664 4777877776443 5899999999999999999999999998887776664 66667777788
Q ss_pred HHHHHHHHhhhhhccccccccCchhhHHHHhhHHHHHHhhccc-----CChhHHHHHHHHHHHHHHHHHhHHHhhhcC
Q 002631 713 GLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPY-----FTHDARESLKNLQGVLLEKATVSVAEAVEN 785 (898)
Q Consensus 713 ~va~elL~~f~~~~~~~v~~f~~~G~lQAtLDiefl~~tL~~Y-----~t~~A~~~~~~l~~~~~~~~~e~~~~~~~~ 785 (898)
.+++.++..+-.. .|++|+++|..|..+||.|+++-...= ..+...+.|.+++-.|==-..+.+.+-.|+
T Consensus 214 his~~l~~~Ll~~---~vk~in~~al~~~~~Dv~~lE~f~~~~~~~~~~~~~L~~~F~eLrQlvdLl~s~~~~~y~d~ 288 (311)
T PF04091_consen 214 HISESLLDLLLSD---DVKRINMNALQNFDLDVKYLESFADSLPVPGNNIPSLRETFAELRQLVDLLLSDDWEEYLDP 288 (311)
T ss_dssp HHHHHHHHHHT------------TTHHHHHHHHHHHHHHHTT-SSSS--SSTTGGGGHHHHHHHHHHH----------
T ss_pred HHHHHHHHHhcCC---cccccCHHHHHHHHHHHHHHHHHHHhCcCcccccccHHHHHHHHHHHHHHHhcCCHHHHhCc
Confidence 8999999988532 699999999999999999999988776 444555666655544333334455555444
No 15
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex. The COG complex comprises eight proteins COG1-8 and plays critical roles in Golgi structure and function [].; PDB: 2JQQ_A.
Probab=96.51 E-value=0.0031 Score=61.73 Aligned_cols=68 Identities=21% Similarity=0.359 Sum_probs=0.4
Q ss_pred CCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhh
Q 002631 14 MYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRI 84 (898)
Q Consensus 14 ~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~ 84 (898)
.+..++|||..||.+.++-.++++|.+.+..+.+. ++++|-.||.+||.-||+--..+..+...+..+
T Consensus 7 ~F~~~~Fd~d~Fl~~~~~~~~Le~L~~dL~~~~~~---L~~~Li~lIN~dY~dFv~Ls~~L~g~~~~i~~l 74 (133)
T PF06148_consen 7 EFTKPDFDVDEFLSSNRRYVSLEDLRKDLRSYSKE---LKNELIELINDDYADFVSLSTNLVGMDEKIEEL 74 (133)
T ss_dssp ----------------------------------------------------------------------H
T ss_pred ccCCCCCCHHHHHHHccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHhhHHHHHHHHHHHccHHHHHHHH
Confidence 45669999999999999999999999887776654 567999999999999999888877776665543
No 16
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=96.12 E-value=6.1 Score=49.82 Aligned_cols=218 Identities=13% Similarity=0.210 Sum_probs=136.8
Q ss_pred CCCCCCChHHHHHHhcCCCCH----HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHH----hHhhHHHHHHHHhhhhcC
Q 002631 15 YFSDSFNAKLFLSRVHQNTSS----ADLEAGALALKTDLKGRTQQRKQLVKDNFDCFV----SCKTTIDDIESKLKRIEE 86 (898)
Q Consensus 15 isS~~Fdp~~fL~~vH~~tS~----~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI----~akdTId~m~~~~~~~e~ 86 (898)
+++++|||+.+++...+..+- ...-+-+..|...++-..++.-.-|++.-..-+ ++--=|+.|+.+....+.
T Consensus 5 f~~~~FD~~~WIN~~~~~~~~~~~~~~~d~~ls~l~~kLql~~qe~~~~le~~~~q~l~~~Pr~~~ev~~l~~ea~~L~~ 84 (766)
T PF10191_consen 5 FSDDDFDVKAWINAALKSRSKDEALEKADAHLSSLVMKLQLYSQEVNASLEETSQQALQRVPRVLREVDRLRQEAASLQE 84 (766)
T ss_pred hCcCCCCHHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 678999999999887765443 344444777777777777777777777777666 344445556555544333
Q ss_pred CCCCCCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhh-
Q 002631 87 DPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKS- 165 (898)
Q Consensus 87 ~~~~~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~- 165 (898)
.|.. +.+.++.+...+......|.+-..=-.++..+...|+.-.-.-.|-..+...++.|||+.+.+.....+.
T Consensus 85 ~~~~-----v~~~~~~~e~~t~~s~~~L~~ld~vK~rm~~a~~~L~EA~~w~~l~~~v~~~~~~~d~~~~a~~l~~m~~s 159 (766)
T PF10191_consen 85 QMAS-----VQEEIKAVEQDTAQSMAQLAELDSVKSRMEAARETLQEADNWSTLSAEVDDLFESGDIAKIADRLAEMQRS 159 (766)
T ss_pred HHHH-----HHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3221 3333333333233333333332222244555566666666677778888889999999988877776655
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHHHHhccCC------CCChhHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHH
Q 002631 166 IALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDP------HIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLF 239 (898)
Q Consensus 166 L~~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~------~~s~~e~~~~I~lLleL~~~~dPiw~~L~~q~~~I~~~l 239 (898)
|.--.+++- |.|-...++.++++|-..+... ..+++....++.++-.+|-.+..--+|-.+++..|.+..
T Consensus 160 L~~l~~~pd----~~~r~~~le~l~nrLEa~vsp~Lv~al~~~~~~~~~~~~~if~~i~R~~~l~~~Y~~~r~~~l~~~W 235 (766)
T PF10191_consen 160 LAVLQDVPD----YEERRQQLEALKNRLEALVSPQLVQALNSRDVDAAKEYVKIFSSIGREPQLEQYYCKCRKAPLQRLW 235 (766)
T ss_pred HHHHcCCCc----hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 221112222 4556666666666655444321 445788999999999998888888888888887777665
Q ss_pred HH
Q 002631 240 EK 241 (898)
Q Consensus 240 ~~ 241 (898)
..
T Consensus 236 ~~ 237 (766)
T PF10191_consen 236 QE 237 (766)
T ss_pred HH
Confidence 44
No 17
>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0015031 protein transport, 0000145 exocyst
Probab=95.76 E-value=0.1 Score=51.94 Aligned_cols=124 Identities=17% Similarity=0.196 Sum_probs=95.9
Q ss_pred CCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhh
Q 002631 17 SDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHL 96 (898)
Q Consensus 17 S~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L 96 (898)
.++|+|-..-....-++|.. +......+.+.-+..+..|+.+|.+||..|=++-.+--.|...+...... +..+
T Consensus 18 ~~~~~pv~~al~~ld~ss~g-~~~~~~~f~~~~~~~~~~L~~vV~eh~q~Fn~sI~sy~~i~~~i~~sq~~-----i~~l 91 (142)
T PF04048_consen 18 TDDFNPVELALSLLDDSSVG-RAHRYQEFEELKKRIEKALQEVVNEHYQGFNSSIGSYSQILSSISESQER-----IREL 91 (142)
T ss_pred cCCCcHHHHHHHhcCCCCcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH
Confidence 68999999999999888874 77888889999999999999999999999999999888888887764332 2235
Q ss_pred HhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHh
Q 002631 97 FKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRG 146 (898)
Q Consensus 97 ~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~ 146 (898)
.+.+..+...=..-...|.+-..+..+.+.++.+|.....+-.+|..|..
T Consensus 92 K~~L~~ak~~L~~~~~eL~~L~~~s~~~~~mi~iL~~Ie~l~~vP~kie~ 141 (142)
T PF04048_consen 92 KESLQEAKSLLGCRREELKELWQRSQEYKEMIEILDQIEELRQVPDKIES 141 (142)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 55554443322233345555566667888999999999999999998864
No 18
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases. RINT1 also functions in membrane trafficking from the endoplasmic reticulum(ER) to the Golgi complex in interphase cells [, , ]. In addition to this, the TIP-1 protein, which is involved in the retrograde transport from the Golgi to the ER []. They share a similar domain organisation with an N-terminal leucine heptad repeat rich coiled coil and an ~500-residue C-terminal RINT1/TIP20 domain, which might be a protein-protein interaction module necessary for the formation of functional complexes.; PDB: 3FHN_A.
Probab=94.98 E-value=0.36 Score=57.55 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCC-----CCccchHHHHHHHHHHHHHHHHhh-cch
Q 002631 627 IQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPA-----VKGVRDVAVELLHTLVAVHAEVFA-GAK 700 (898)
Q Consensus 627 i~~~~~~l~qLd~~Lfe~Y~~~k~~~L~~~I~~gil~~g~dW~~~~~-----P~~VRpYv~e~Ll~LV~VHaEV~~-ia~ 700 (898)
.+++...+..|..+..+.++..=...+...++++.- .-.|...+. |..|+|-..++|..|-..=+-+.+ +++
T Consensus 300 Fde~i~~y~~l~~~~~~~iv~~v~~~~k~~lk~Y~k--~~~W~~~~~~~~~~~~~~S~el~~~L~~L~~~L~~L~~~L~~ 377 (494)
T PF04437_consen 300 FDETISAYEKLRKRMLESIVDRVVKEFKASLKAYFK--RSQWSSIESPSDSSPLSPSPELVPALSLLRSRLSFLERSLPP 377 (494)
T ss_dssp THHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHHHHT----GGGT-------------GGGHHHHHHHHHHHHHHHTS--H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ccCCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCH
Confidence 445677788888899999998888888888888775 357876653 578999988888877665555544 555
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhccccccccCchhhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHH
Q 002631 701 PLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLL 772 (898)
Q Consensus 701 ~Lv~rvLs~Lve~va~elL~~f~~~~~~~v~~f~~~G~lQAtLDiefl~~tL~~Y~t~~A~~~~~~l~~~~~ 772 (898)
....++-..+++.+..-+.+.+- ...+|+.+|..|...|++.|-.+++.|... ....|+.+.+.+.
T Consensus 378 ~~f~~i~r~ia~~l~~~l~~~Il-----~~n~Fs~~Ga~Ql~~D~~~L~~~~~~~~~~-p~~~f~~l~E~~~ 443 (494)
T PF04437_consen 378 ADFRRIWRRIASKLDDYLWESIL-----MSNKFSRAGAAQLQFDMRALFSVFSQYTPR-PEAFFKRLREACK 443 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT-----TTS-B-HHHHHHHHHHHHHHHTTS--TTSG-G-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----hcCeeChhHHHHHHHHHHHHHHHHHhhccC-HHHHHHHHHHHHH
Confidence 56777777777777777777443 356999999999999999999999998755 4577777776643
No 19
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.89 E-value=0.43 Score=58.73 Aligned_cols=150 Identities=17% Similarity=0.164 Sum_probs=111.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHHHhh
Q 002631 31 QNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRA 110 (898)
Q Consensus 31 ~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a~~i 110 (898)
...+.+++...+..|+.+-+.-++.|+.||..++.-|-.|-.+-.++-+.+.+..+. +-.+.+++......-+.=
T Consensus 41 ~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~i~s~It~~rer-----I~~vK~~L~~~k~ll~~~ 115 (982)
T KOG3691|consen 41 GSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGEISSGITNCRER-----IHNVKNNLEACKELLNTR 115 (982)
T ss_pred cCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcC
Confidence 456778899999999999999999999999999999999998888887777654321 222455555443333333
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhccc--chhHHHHHHHHHHHH
Q 002631 111 FEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPS--HVNILKRVLEEVEKV 185 (898)
Q Consensus 111 ~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~~--~v~vf~kV~~EVe~i 185 (898)
...|.+--.+..+-+.|+++|...+.+-.+|.++..+|.++.|-+|-+-..+|..+.... .|.++..+-.|.+..
T Consensus 116 rdeLqklw~~~~q~K~Vi~vL~eieEl~qvPqkie~~i~keqY~~Asdll~~~~~~lng~L~~VEgLs~l~~ele~~ 192 (982)
T KOG3691|consen 116 RDELQKLWAENSQYKKVIEVLKEIEELRQVPQKIETLIAKEQYLQASDLLTRAWELLNGPLDGVEGLSDLRSELEGL 192 (982)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhHHHHHHHHH
Confidence 344444455557778999999999999999999999999999999999999998876432 344444444444433
No 20
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.16 E-value=8.8 Score=46.90 Aligned_cols=173 Identities=12% Similarity=0.207 Sum_probs=122.5
Q ss_pred CCCCCCChHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcCCCCCCCc
Q 002631 15 YFSDSFNAKLFLSRVHQN-TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGT 93 (898)
Q Consensus 15 isS~~Fdp~~fL~~vH~~-tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~~~~~~~t 93 (898)
+..+.|+.-.|+.++.++ .|+.++-.-...+..+|+..+..+...|..+=|.=-+.+..+++....+..
T Consensus 14 ~~t~~f~~v~~in~lfp~eqSL~~id~li~ki~~eir~~d~~l~~~Vr~q~N~g~~~~e~l~da~~ai~e---------- 83 (793)
T KOG2180|consen 14 IPTPEFNFVEYINELFPAEQSLTNIDSLIQKIQGEIRRVDKNLLAVVRTQENSGTRGKENLADAQAAIEE---------- 83 (793)
T ss_pred cCCcchhHHHHHHHhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhHHHHHHHHHH----------
Confidence 334899999999999876 577777777777888999999999999988776655665555555544433
Q ss_pred hhhHhhHHHHHHHHHhhhchHHHHHHHH-------HHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhh
Q 002631 94 AHLFKLMQGVSSQANRAFEPLFERQAQA-------EKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSI 166 (898)
Q Consensus 94 ~~L~~~i~~i~~~a~~i~~pLle~r~Ka-------ekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L 166 (898)
|...|.++.+.|++--.-+.+--..+ .+|-..+.+|+++.-|..==.+|...+.++.|.++++-|.-.-.+
T Consensus 84 --L~~~i~eiks~ae~Te~~V~eiTrdIKqLD~AKkNLTtSiT~L~~L~MLv~~vesL~~l~~kr~y~e~a~~lqai~~l 161 (793)
T KOG2180|consen 84 --LFQKIQEIKSVAESTEAMVQEITRDIKQLDFAKKNLTTSITTLHRLHMLVTGVESLNALLSKRSYGEAASPLQAILQL 161 (793)
T ss_pred --HHHHHHHHHHHHHhHHHHHHHHHHHHHhhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHhHHHHHHHH
Confidence 44444444444333222222211111 357778899999999998888999999999999999999887775
Q ss_pred h----cccchhHHHHHHHHHHHHHHHHHHHHHHhccC
Q 002631 167 A----LPSHVNILKRVLEEVEKVMQEFKAMLYKSMED 199 (898)
Q Consensus 167 ~----~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~ 199 (898)
. .|..++=+...-..++++=..+..++.+-+.+
T Consensus 162 l~~F~~Yk~v~~I~~Ls~si~~~k~~l~~qi~~df~~ 198 (793)
T KOG2180|consen 162 LNHFIAYKSVDEIANLSESIDKLKKSLLSQIFQDFKA 198 (793)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 46677777777777777777777666665544
No 21
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.
Probab=90.38 E-value=19 Score=43.49 Aligned_cols=84 Identities=7% Similarity=0.122 Sum_probs=66.1
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHHHHhhhhhccccc-cccCchhhHHHHh
Q 002631 666 VQWGAAPAVKGVRDVAVELLHTLVAVHAEVFA-GAKPLLDKTLGILVEGLIDTFLSLFDENQSNNL-KSLDANGFCQLML 743 (898)
Q Consensus 666 ~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV~~-ia~~Lv~rvLs~Lve~va~elL~~f~~~~~~~v-~~f~~~G~lQAtL 743 (898)
-.|... +.+..++.++--....... +.+++...++..+.+.+..+.++++.+++.+|= ..-...+.-|..-
T Consensus 391 ~~W~~~-------~~~~~I~~Ti~dY~~d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~~a~~i~~ 463 (566)
T PF06046_consen 391 KKWYSG-------EAVDTICATIEDYLQDFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKEAAERIRR 463 (566)
T ss_dssp GGGCTS--------HHHHHHHHHHHHHHHHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCCCHHHHHH
T ss_pred CcCcCc-------chHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHHHH
Confidence 379888 7888888888888888888 889999999999999999999999987543221 3346778899999
Q ss_pred hHHHHHHhhcccC
Q 002631 744 ELDYFETILNPYF 756 (898)
Q Consensus 744 Diefl~~tL~~Y~ 756 (898)
|++-|.+.+..|.
T Consensus 464 D~~~l~~~F~~~~ 476 (566)
T PF06046_consen 464 DAEQLKSFFSKLG 476 (566)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999998
No 22
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=84.08 E-value=18 Score=39.15 Aligned_cols=88 Identities=10% Similarity=0.149 Sum_probs=75.2
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHHHH------hhcchhhHHHHHHHHHHHHHHHHHHhhhhhccccccccCchhh
Q 002631 665 GVQWGAAPAVKGVRDVAVELLHTLVAVHAEV------FAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGF 738 (898)
Q Consensus 665 g~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV------~~ia~~Lv~rvLs~Lve~va~elL~~f~~~~~~~v~~f~~~G~ 738 (898)
...|+-.-.+.+-+|||..++-.+-.....+ ..+.+++...+..+++.-+.+.|++.|. .|++=+.+|-
T Consensus 78 ~vKWdvkev~~qhs~YVd~l~~~~~~f~~rL~~i~~~~~i~~~~~~~lw~~~i~~~~~~Lveg~s-----~vkKCs~eGR 152 (234)
T PF10474_consen 78 NVKWDVKEVMSQHSSYVDQLVQEFQQFSERLDEISKQGPIPPEVQNVLWDRLIFFAFETLVEGYS-----RVKKCSNEGR 152 (234)
T ss_pred HcCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----hccCCChhhH
Confidence 4689999999999999999999999988888 3345667777888888888999999997 5899999999
Q ss_pred HHHHhhHHHHHHhhcccCC
Q 002631 739 CQLMLELDYFETILNPYFT 757 (898)
Q Consensus 739 lQAtLDiefl~~tL~~Y~t 757 (898)
.+..||+.-+..-|..-+.
T Consensus 153 alM~lD~q~~~~~le~l~~ 171 (234)
T PF10474_consen 153 ALMQLDFQQLQNKLEKLSG 171 (234)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999888865543
No 23
>PF14923 CCDC142: Coiled-coil protein 142
Probab=78.20 E-value=31 Score=40.70 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=61.1
Q ss_pred cCCCCCCCCC---CCCccchHHHHHHHHHHHHHHHHhhcchh-----hHHHHHHHHHHHHHHHHHHhhhhhccccccccC
Q 002631 663 DSGVQWGAAP---AVKGVRDVAVELLHTLVAVHAEVFAGAKP-----LLDKTLGILVEGLIDTFLSLFDENQSNNLKSLD 734 (898)
Q Consensus 663 ~~g~dW~~~~---~P~~VRpYv~e~Ll~LV~VHaEV~~ia~~-----Lv~rvLs~Lve~va~elL~~f~~~~~~~v~~f~ 734 (898)
-.|--|.-.. -|...+.||-.++.+++.==-|....-++ .+..++..++|.-.+.++ .++ -|||
T Consensus 257 P~g~~WR~~~~~~lP~~pS~Yv~~~v~~vl~PVl~g~q~L~~~aq~~~l~~~l~a~~eAWLdhIl---~~k-----IKFS 328 (450)
T PF14923_consen 257 PSGRYWRRSLSPELPSAPSEYVEYVVETVLEPVLQGVQGLPPEAQIPALSQALTAMLEAWLDHIL---MHK-----IKFS 328 (450)
T ss_pred CCcchhcccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHH---Hcc-----ceee
Confidence 3455787765 37799999999888876533232221111 234444444444444433 222 3899
Q ss_pred chhhHHHHhhHHHHHHhhcc--c-CChhHHHHHH
Q 002631 735 ANGFCQLMLELDYFETILNP--Y-FTHDARESLK 765 (898)
Q Consensus 735 ~~G~lQAtLDiefl~~tL~~--Y-~t~~A~~~~~ 765 (898)
..|++|.+.|..++++-+.. | .++++++.+.
T Consensus 329 ~~GAlQL~~DF~~Vr~wl~~e~~~Ls~e~rq~Ll 362 (450)
T PF14923_consen 329 LQGALQLRQDFGYVRDWLESECSGLSPELRQTLL 362 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHh
Confidence 99999999999999999887 5 6666655443
No 24
>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]
Probab=72.90 E-value=2.8e+02 Score=35.53 Aligned_cols=129 Identities=14% Similarity=0.202 Sum_probs=88.7
Q ss_pred hhhHHhHhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchh
Q 002631 64 FDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPST 143 (898)
Q Consensus 64 f~kFI~akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~ 143 (898)
-+.|.-|-.+.+++..++.+.-+ -+.+|.++|..+....-.-...+++-..+-.+....+..|+-...+.+--..
T Consensus 267 SdsFfha~~~~~~Lq~~~~d~~~-----~vk~Lre~i~~vd~~~~~~s~~Ile~~~~r~n~~kL~~kL~~i~~V~~~q~~ 341 (951)
T KOG2115|consen 267 SDSFFHAMTSLHNLQKELRDTMS-----EVKELRENIKEVDAENVRKSIKILELALTRKNVEKLLQKLRLIATVHQAQST 341 (951)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 36789999999999988876321 1455888888876554444444444444444444555555666667777778
Q ss_pred hHhhhhcCChhHHHHHHHHhhhhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 002631 144 IRGSISKGEFDLAVREYKKAKSIALP---SHVNILKRVLEEVEKVMQEFKAMLYKSM 197 (898)
Q Consensus 144 L~~~I~~~dYd~aV~dY~kak~L~~~---~~v~vf~kV~~EVe~ii~~~r~~L~~kL 197 (898)
++.-++.+||..|++..+--..+... ..+..|+..|.+.-.....+-+.+-+.+
T Consensus 342 vq~ll~~~d~~~ALdlI~t~q~~L~g~eL~gl~sfrhL~~ql~el~~tI~~m~t~eF 398 (951)
T KOG2115|consen 342 VQLLLSTQDFVGALDLIKTIQELLKGSELLGLHSFRHLRSQLLELYKTIDKMLTREF 398 (951)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHhhhhhcCchhHHhhHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999998887776652 4688999999887765555444443333
No 25
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=69.24 E-value=2.2e+02 Score=34.41 Aligned_cols=155 Identities=15% Similarity=0.223 Sum_probs=88.2
Q ss_pred hHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhH-----HHHHHHHhhhhhc--
Q 002631 96 LFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDL-----AVREYKKAKSIAL-- 168 (898)
Q Consensus 96 L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~-----aV~dY~kak~L~~-- 168 (898)
+..-|..+...+..+...|-.|+...++|...++- .-+|..|.+.|-.|+-+. +...+.|-.....
T Consensus 47 iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~~-------i~ipP~lI~~I~~~~v~e~~~~~~~~~~~k~~~~~~~~ 119 (508)
T PF04129_consen 47 ISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFIDD-------IVIPPDLIRSICEGPVNEQYIEELLELLKKKIFFSKDQ 119 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-------HcCCHHHHHhHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 56667777888888888888888877777776432 239999999999998776 1222333222221
Q ss_pred -ccchhHHHHHHHHHH----HHHHHHHHHHHHhc---cCCCCChhHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHHH
Q 002631 169 -PSHVNILKRVLEEVE----KVMQEFKAMLYKSM---EDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFE 240 (898)
Q Consensus 169 -~~~v~vf~kV~~EVe----~ii~~~r~~L~~kL---~~~~~s~~e~~~~I~lLleL~~~~dPiw~~L~~q~~~I~~~l~ 240 (898)
.....+.+.+..+.+ +.++.+|+-|..++ +.|.....-.-. .|++ -.+...||..++..+-..+.
T Consensus 120 ~~~~~~a~~d~~~~Le~L~~ka~~rir~fl~~kI~~lr~~~tn~q~iQ~---~LLk----~~~~~~FL~~~~~~~a~El~ 192 (508)
T PF04129_consen 120 SFKDSKAIKDVKPELEKLKNKAVERIRDFLLKKIKSLRKPKTNSQIIQQ---VLLK----YKELFQFLKKHSPELAKELR 192 (508)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHH---HHHh----hHHHHHHHHHhhHHHHHHHH
Confidence 123444554544444 33334444343343 333322211111 2222 25788888888878777777
Q ss_pred HhHHHHHHHHHHHhHHHHHhhhhhHH
Q 002631 241 KCTLDHEARMETLHNELHERAMSDAR 266 (898)
Q Consensus 241 ~~~~~~~~~~e~l~~~l~~~~~s~~~ 266 (898)
..+.+...+ ........|+.+..+
T Consensus 193 ~~Yv~tM~~--~Y~~~F~~Y~~~L~k 216 (508)
T PF04129_consen 193 QAYVETMSW--YYSSYFKRYIRSLEK 216 (508)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 766655433 222344455555443
No 26
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=68.77 E-value=63 Score=39.04 Aligned_cols=143 Identities=19% Similarity=0.268 Sum_probs=87.3
Q ss_pred hhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhccc--c
Q 002631 94 AHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPS--H 171 (898)
Q Consensus 94 ~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~~--~ 171 (898)
..+-.+|..|-..-...+-|.++.+- +-.+++|+--||.+ |..-+..|.+|-.|+... .
T Consensus 108 ~~lf~nIssi~~fh~qfllp~l~~r~-------Iadv~qKlAPFLKm------------YseY~knydrA~~L~~~lt~r 168 (623)
T KOG4424|consen 108 TGLFGNISSIHNFHGQFLLPELEKRI-------IADVFQKLAPFLKM------------YSEYAKNYDRALKLFQTLTSR 168 (623)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhH-------HHHHHHHhhhHHHH------------HHHHHhcchhHHHHHHHHHhh
Confidence 34556666666666566666666555 66778888888866 999999999999998763 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhHHHHHHH-HHhcCCCCCChHHHHHHHhHHHHHHHHHHhHHHHHHHH
Q 002631 172 VNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVR-LLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARM 250 (898)
Q Consensus 172 v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~~s~~e~~~~I~-lLleL~~~~dPiw~~L~~q~~~I~~~l~~~~~~~~~~~ 250 (898)
.+.|++|.++|++.-.-=.-.|..-|..|-.-+--++=++. +|+. -+++||=|.=+...-+-|...-. .......++
T Consensus 169 sp~F~~vl~~Iek~~~cg~l~LqhhMiePVQRIPRYeLLLk~yl~~-lp~~d~D~~d~~ksLe~I~~aA~-HsNaai~k~ 246 (623)
T KOG4424|consen 169 SPQFRKVVEEIEKQPECGGLKLQHHMIEPVQRVPRYELLLQDYLLY-LPPDDPDYKDLKKSLELISTAAS-HSNAAITKM 246 (623)
T ss_pred ChHHHHHHHHHhhchhcCCccchhheechhhhhhHHHHHHHHHHHh-CCCCCcchHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 59999999999988655455565666555222222222222 3333 35566666555543333332222 223334455
Q ss_pred HHHhHHH
Q 002631 251 ETLHNEL 257 (898)
Q Consensus 251 e~l~~~l 257 (898)
|.+++-+
T Consensus 247 E~~~kLl 253 (623)
T KOG4424|consen 247 ERLQKLL 253 (623)
T ss_pred HHHHHHH
Confidence 6665444
No 27
>KOG0553 consensus TPR repeat-containing protein [General function prediction only]
Probab=61.95 E-value=48 Score=37.08 Aligned_cols=90 Identities=19% Similarity=0.315 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhc------------ccchhHHHHHHHHHH
Q 002631 116 ERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL------------PSHVNILKRVLEEVE 183 (898)
Q Consensus 116 e~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~------------~~~v~vf~kV~~EVe 183 (898)
+.+.++++|+.- =.+.++.++|..||+-|.+|..|.. ++.+.-+..-|++|+
T Consensus 76 e~~~~AE~LK~e----------------GN~~m~~~~Y~eAv~kY~~AI~l~P~nAVyycNRAAAy~~Lg~~~~AVkDce 139 (304)
T KOG0553|consen 76 EDKALAESLKNE----------------GNKLMKNKDYQEAVDKYTEAIELDPTNAVYYCNRAAAYSKLGEYEDAVKDCE 139 (304)
T ss_pred hHHHHHHHHHHH----------------HHHHHHhhhHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhcchHHHHHHHH
Confidence 678888887753 2355788999999999999999752 234455667788887
Q ss_pred HHH--HHHHHHHHHhccCCCCChhHHHHHH---HHHhcCCCCC
Q 002631 184 KVM--QEFKAMLYKSMEDPHIDLTNLENTV---RLLLELEPES 221 (898)
Q Consensus 184 ~ii--~~~r~~L~~kL~~~~~s~~e~~~~I---~lLleL~~~~ 221 (898)
.-+ +.---+.|.||.-.-......++.| ..=|+|+|..
T Consensus 140 ~Al~iDp~yskay~RLG~A~~~~gk~~~A~~aykKaLeldP~N 182 (304)
T KOG0553|consen 140 SALSIDPHYSKAYGRLGLAYLALGKYEEAIEAYKKALELDPDN 182 (304)
T ss_pred HHHhcChHHHHHHHHHHHHHHccCcHHHHHHHHHhhhccCCCc
Confidence 754 3455677777755443343334433 3445666653
No 28
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=60.29 E-value=21 Score=44.69 Aligned_cols=181 Identities=9% Similarity=0.076 Sum_probs=120.7
Q ss_pred hhcccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhcC-C
Q 002631 9 FAEKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE-D 87 (898)
Q Consensus 9 lr~~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e~-~ 87 (898)
.|...+-.+..|++..|..-.|...+ .|..++..+.. ++...-.+..++.-|+.+..... -.+.++..++.+.. +
T Consensus 79 ~r~~~~~~~~g~s~~~f~r~~~~qi~--~l~~s~~~~d~-~~~~~~~~~~~~~~~~t~l~~~~-~l~~~i~~~k~~~~~d 154 (934)
T KOG2347|consen 79 IRVTTLSGGKGTSTVCFRRVNHEQIG--PLDESAVRVDE-QQDQRKVPGRLKGVALTSLQSEP-PLGECIEPLKLKINED 154 (934)
T ss_pred eEEeeccCccccCchhhhhhhHhhhc--cchhhhhhccc-ccccccccccccccCCcccccCC-CcccccCchhhcchhh
Confidence 35667788999999999999998888 88888888877 66667778888888888888777 44444444443321 1
Q ss_pred CCCCCchhhHhhHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhh
Q 002631 88 PEGSGTAHLFKLMQGVSSQANRAFE--PLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKS 165 (898)
Q Consensus 88 ~~~~~t~~L~~~i~~i~~~a~~i~~--pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~ 165 (898)
.+. ..+..+.+ ....=|+ +.+.+-.+.-........+.-+|+-|+.|+..+.++-+++++.+|.+|...-.
T Consensus 155 ~~~---lfp~~~~D----l~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~~~fi~~~dtl~~ 227 (934)
T KOG2347|consen 155 NKT---LFPITSVD----LRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNFDSFISCKDTLDN 227 (934)
T ss_pred hhh---hccccccc----cccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcchhHHHHHHHHHHH
Confidence 000 00000000 0111222 34444444433333334456677889999999999999999999999998766
Q ss_pred hhc-------ccchhHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 002631 166 IAL-------PSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPH 201 (898)
Q Consensus 166 L~~-------~~~v~vf~kV~~EVe~ii~~~r~~L~~kL~~~~ 201 (898)
+-+ .-+.....++|.-++... ...+.+|+.+..-.
T Consensus 228 i~~kLe~~e~~~~gs~t~~l~n~i~~~~-s~ad~iF~~vl~Rk 269 (934)
T KOG2347|consen 228 IHQKLERGEEDPHGSGTTKLENCIKNST-SRADLIFEDVLERK 269 (934)
T ss_pred HHHHHhccccCccchHHHHHHHHHHHhh-hHHHHHHHHHHhcc
Confidence 521 125566677888888877 88888998886653
No 29
>cd07651 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. This subfamily is composed of Schizosaccharomyces pombe Cdc15 and Imp2, and similar proteins. These proteins contain an N-terminal F-BAR domain and a C-terminal SH3 domain. S. pombe Cdc15 and Imp2 play both distinct and overlapping roles in the maintenance and strengthening of the contractile ring at the division site, which is required in cell division. Cdc15 is a component of the actomyosin ring and is required in normal cytokinesis. Imp2 colocalizes with the medial ring during septation and is required for normal septation. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation
Probab=58.26 E-value=2.6e+02 Score=29.93 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhh
Q 002631 34 SSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKT 72 (898)
Q Consensus 34 S~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akd 72 (898)
+++.++.....+...-......|...|++.+.+|..-..
T Consensus 61 a~~~i~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~~~~ 99 (236)
T cd07651 61 SLDTLRLETESMAKSHLKFAKQIRQDLEEKLAAFASSYT 99 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888888888889999999999999865543
No 30
>KOG1925 consensus Rac1 GTPase effector FHOS [Signal transduction mechanisms; Cytoskeleton]
Probab=57.31 E-value=1.5e+02 Score=35.25 Aligned_cols=69 Identities=17% Similarity=0.300 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHH--HHHHHhccCCCCCh-hHHHHHHHHHhcCCCCCChHHHHHHHh---------HHHHHHHHHHhHHH
Q 002631 178 VLEEVEKVMQEFK--AMLYKSMEDPHIDL-TNLENTVRLLLELEPESDPVWHYLNVQ---------NHRIRGLFEKCTLD 245 (898)
Q Consensus 178 V~~EVe~ii~~~r--~~L~~kL~~~~~s~-~e~~~~I~lLleL~~~~dPiw~~L~~q---------~~~I~~~l~~~~~~ 245 (898)
.++=|+-+++.|- .+||..+.....+. -+.+++...|.+|+....--|+||.+- +.++..++..|-..
T Consensus 516 lhHlc~~vVE~FpessDLYSEiGA~tRSAkVDf~qL~DNL~qlErrCKaSWe~L~~Iakhe~~p~l~~r~~~fl~~cA~R 595 (817)
T KOG1925|consen 516 LHHLCSLVVETFPESSDLYSEIGALTRSAKVDFEQLTDNLGQLERRCKASWESLRSIAKHELAPALRARLTHFLDQCARR 595 (817)
T ss_pred HHHHHHHHHHhCCcchhHHHHhHhhhhhhhccHHHHHHHHHHHHHHhhHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 3555777777775 57777776654443 357788888999999889999999873 45566666666554
Q ss_pred H
Q 002631 246 H 246 (898)
Q Consensus 246 ~ 246 (898)
+
T Consensus 596 I 596 (817)
T KOG1925|consen 596 I 596 (817)
T ss_pred H
Confidence 3
No 31
>KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown]
Probab=53.92 E-value=1.3e+02 Score=34.44 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=43.3
Q ss_pred hhhhcCChhHHHHHHHHhhhhhcc------------cchhHHHHHHHHHHHHHHHHH--HHHHHhccCCCCC---hhHHH
Q 002631 146 GSISKGEFDLAVREYKKAKSIALP------------SHVNILKRVLEEVEKVMQEFK--AMLYKSMEDPHID---LTNLE 208 (898)
Q Consensus 146 ~~I~~~dYd~aV~dY~kak~L~~~------------~~v~vf~kV~~EVe~ii~~~r--~~L~~kL~~~~~s---~~e~~ 208 (898)
+..++|.|+.||++|.++..+.-+ ..+..|.-.-.+|+.-+.==+ -+-|.|=.....+ ..|.+
T Consensus 106 ~yFKQgKy~EAIDCYs~~ia~~P~NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~AR~~Lg~~~EAK 185 (536)
T KOG4648|consen 106 TYFKQGKYEEAIDCYSTAIAVYPHNPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQARESLGNNMEAK 185 (536)
T ss_pred hhhhccchhHHHHHhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 456899999999999999886542 245566666677776553211 1122211111111 23445
Q ss_pred HHHHHHhcCCCC
Q 002631 209 NTVRLLLELEPE 220 (898)
Q Consensus 209 ~~I~lLleL~~~ 220 (898)
+-.+.-|+|+|.
T Consensus 186 kD~E~vL~LEP~ 197 (536)
T KOG4648|consen 186 KDCETVLALEPK 197 (536)
T ss_pred HhHHHHHhhCcc
Confidence 555556677776
No 32
>PF12022 DUF3510: Domain of unknown function (DUF3510); InterPro: IPR024603 The COG complex comprises eight proteins (COG1-8) and plays critical roles in Golgi structure and function []. This uncharacterised domain is found in the C-terminal of COG complex subunit 2 proteins.
Probab=51.94 E-value=49 Score=32.26 Aligned_cols=56 Identities=9% Similarity=0.138 Sum_probs=41.2
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHHHH-hhcchhhHHHHHHHHHHHHHHHHHHh
Q 002631 666 VQWGAAPAVKGVRDVAVELLHTLVAVHAEV-FAGAKPLLDKTLGILVEGLIDTFLSL 721 (898)
Q Consensus 666 ~dW~~~~~P~~VRpYv~e~Ll~LV~VHaEV-~~ia~~Lv~rvLs~Lve~va~elL~~ 721 (898)
+.|-.-+.|+..++||-.+|..|-..+.+. ..+.+.....++..+++.+++.++..
T Consensus 22 YR~Tnk~~Pt~~S~yV~~il~Pl~~F~~~~~~~~~~~~~~~~~~~v~~~v~~~y~~~ 78 (125)
T PF12022_consen 22 YRMTNKPVPTKPSPYVSSILRPLKSFLEEYSSYLSPEIIEEWLQKVITEVTERYYEI 78 (125)
T ss_pred hhccCCCCCCCccHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468889999999999999999999999888 33555555555555555555444433
No 33
>KOG4603 consensus TBP-1 interacting protein [Signal transduction mechanisms]
Probab=49.71 E-value=1.7e+02 Score=30.25 Aligned_cols=68 Identities=12% Similarity=0.189 Sum_probs=36.7
Q ss_pred HhhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhh
Q 002631 70 CKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSIS 149 (898)
Q Consensus 70 akdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~ 149 (898)
-++|+..|-.+++.....- .+.++...-..+...+-+.+.+..+++... ..|.
T Consensus 98 l~~t~s~veaEik~L~s~L----------t~eemQe~i~~L~kev~~~~erl~~~k~g~-----------------~~vt 150 (201)
T KOG4603|consen 98 LQQTCSYVEAEIKELSSAL----------TTEEMQEEIQELKKEVAGYRERLKNIKAGT-----------------NHVT 150 (201)
T ss_pred HHHHHHHHHHHHHHHHHhc----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------ccCC
Confidence 3566777777766532210 122233333445555666667766666653 3444
Q ss_pred cCChhHHHHHHHHhh
Q 002631 150 KGEFDLAVREYKKAK 164 (898)
Q Consensus 150 ~~dYd~aV~dY~kak 164 (898)
..|-+++-+.|.++.
T Consensus 151 pedk~~v~~~y~~~~ 165 (201)
T KOG4603|consen 151 PEDKEQVYREYQKYC 165 (201)
T ss_pred HHHHHHHHHHHHHHH
Confidence 556667777776643
No 34
>PF11547 E3_UbLigase_EDD: E3 ubiquitin ligase EDD; InterPro: IPR024725 EDD, the ER ubiquitin ligase from the HECT ligases, contains an N-terminal ubiquitin-associated (UBA) domain which binds ubiquitin. Ubiquitin is recognised by helices alpha-1 and -3 in in the UBA domain. EDD is involved in DNA damage repair pathways and binds to mono-ubiquitinated proteins [].; GO: 0043130 ubiquitin binding; PDB: 2QHO_H.
Probab=49.70 E-value=22 Score=28.89 Aligned_cols=30 Identities=37% Similarity=0.530 Sum_probs=23.8
Q ss_pred CChHHHHHHHHHH----HHHHHHHHHhhhhcchh
Q 002631 810 VSPDDLIALAQQY----SSELLQAELERTRINTA 839 (898)
Q Consensus 810 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 839 (898)
.=|||++.-||.+ +++.+..||.||-+|+.
T Consensus 7 ~vPedlI~q~q~VLqgksR~vIirELqrTnLdVN 40 (53)
T PF11547_consen 7 QVPEDLINQAQVVLQGKSRNVIIRELQRTNLDVN 40 (53)
T ss_dssp GS-HHHHHHHHHHSTTS-HHHHHHHHHHTTT-HH
T ss_pred cCCHHHHHHHHHHHcCCcHHHHHHHHHHhcccHH
Confidence 4599999999987 68899999999998764
No 35
>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.29 E-value=6.4e+02 Score=31.72 Aligned_cols=191 Identities=10% Similarity=0.119 Sum_probs=112.9
Q ss_pred CCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHH-HHhhhhcCCC--CCC
Q 002631 15 YFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIE-SKLKRIEEDP--EGS 91 (898)
Q Consensus 15 isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~-~~~~~~e~~~--~~~ 91 (898)
.....|-|..-...+...+.+.++...+..+.++-...+++|-.|+.+ ..+|+.-. ..+..+.+.+ -.+
T Consensus 13 ~~~~~~~~e~~~eli~d~t~i~qi~~~le~~~~ee~~~~~~L~~lL~q--------~~~ie~~~~~~l~r~~~~L~~v~~ 84 (773)
T KOG0412|consen 13 GVGHGSKPEKVGELIRDLTDISQIDLLLERIAREEARVDKDLEALLSQ--------QQTIEGENMSALTRSAENLLTVEG 84 (773)
T ss_pred ccccCcccHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcchhhhHHHHHHHhhhhhhhhhc
Confidence 555667777777777777789999999999999988888888777765 33444311 1122221111 011
Q ss_pred CchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhcc--
Q 002631 92 GTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALP-- 169 (898)
Q Consensus 92 ~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~~-- 169 (898)
...+|..+|.++...|+.+...+-..-..-.++...+..+...+.|=+=-.-+..+|+..||+.|-.-..|...+-+.
T Consensus 85 da~el~~~i~nt~~lAe~Vs~kVr~lDla~~Rv~~clq~v~dvrdlk~C~~gv~~Al~seDyE~AA~~IhRflslD~~~i 164 (773)
T KOG0412|consen 85 DAKELTDAIKNTCVLAETVSGKVRALDLAQNRVNECLQRVDDVRDLKNCIEGVDTALESEDYEKAATHIHRFLSLDQALI 164 (773)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHH
Confidence 245688888888888888888775443333344444444444444433334566889999999999999988886221
Q ss_pred -----cchhHH---HHHHHHHHHHHHHHHHHHHHhccCCC--CChhHHHHHHHH
Q 002631 170 -----SHVNIL---KRVLEEVEKVMQEFKAMLYKSMEDPH--IDLTNLENTVRL 213 (898)
Q Consensus 170 -----~~v~vf---~kV~~EVe~ii~~~r~~L~~kL~~~~--~s~~e~~~~I~l 213 (898)
..+... .-=+.-.++.-+.++..+|+++.... -+..+..+.+++
T Consensus 165 ~~~~~~~~~~ts~i~~~~~~L~~a~e~L~~l~~~~f~eA~r~~D~~ei~RffKm 218 (773)
T KOG0412|consen 165 ESRFAKQVVPTSEISDPYETLKEAKERLSKLFKERFTEAVRKQDLKEITRFFKM 218 (773)
T ss_pred hhhhhhccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 011111 22233334444555666677775542 223444555543
No 36
>KOG4182 consensus Uncharacterized conserved protein [Function unknown]
Probab=49.18 E-value=5.4e+02 Score=30.83 Aligned_cols=80 Identities=16% Similarity=0.264 Sum_probs=51.8
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhh-hhcccchhHHHHHHHHHHHHHHH
Q 002631 110 AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKS-IALPSHVNILKRVLEEVEKVMQE 188 (898)
Q Consensus 110 i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~-L~~~~~v~vf~kV~~EVe~ii~~ 188 (898)
-...|--...|-.++..+.+.|+.---+=+|-+.+..-..+||..-+-+....-++ |-...+++- +.|+.++++.
T Consensus 107 CiAaLaRldn~kQkleaA~esLQdaaGl~nL~a~lED~Fa~gDL~~aadkLaalqkcL~A~~elae----fAe~qkQlE~ 182 (828)
T KOG4182|consen 107 CIAALARLDNKKQKLEAAKESLQDAAGLGNLLAELEDGFARGDLKGAADKLAALQKCLHAQEELAE----FAERQKQLED 182 (828)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhhccHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhHH----HHHHHHHHHH
Confidence 33444334455567777888888888889999999999999998777665443332 222223333 3456666667
Q ss_pred HHHHH
Q 002631 189 FKAML 193 (898)
Q Consensus 189 ~r~~L 193 (898)
|++.|
T Consensus 183 ~edRL 187 (828)
T KOG4182|consen 183 FEDRL 187 (828)
T ss_pred HHHHH
Confidence 77665
No 37
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=42.29 E-value=4.9e+02 Score=28.39 Aligned_cols=23 Identities=22% Similarity=0.396 Sum_probs=20.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 002631 170 SHVNILKRVLEEVEKVMQEFKAM 192 (898)
Q Consensus 170 ~~v~vf~kV~~EVe~ii~~~r~~ 192 (898)
....-+.+...|++.+++++|..
T Consensus 120 ~~~~~l~~~l~ea~~mL~emr~r 142 (264)
T PF06008_consen 120 LPSEDLQRALAEAQRMLEEMRKR 142 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhc
Confidence 35678999999999999999877
No 38
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation.
Probab=38.17 E-value=5e+02 Score=32.25 Aligned_cols=163 Identities=13% Similarity=0.157 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHhHHHH-HHhhhhcCCCCCCCCC----CCCcc
Q 002631 603 SSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTA-ATTFLLDSGVQWGAAP----AVKGV 677 (898)
Q Consensus 603 ip~L~~~fe~~f~~~~~~~~~~~~i~~~~~~l~qLd~~Lfe~Y~~~k~~~L~~~-I~~gil~~g~dW~~~~----~P~~V 677 (898)
+-+|...|..-|.. +.-....+-+.+..+..+-.+.|.++++.++..|... + .+.| ||.-+
T Consensus 336 i~~LL~fY~~~~~k---~i~~~s~L~~tl~~L~~~a~~~f~~~l~~~~~~l~~~~~-----------~~~~~DL~PP~~l 401 (618)
T PF06419_consen 336 IANLLSFYQMTFSK---LIGEDSSLIETLKELQDLAQKKFFSSLRDHVAKLLRSAP-----------EPPPADLSPPEWL 401 (618)
T ss_pred HHHHHHHHHHHHHH---HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----------CCCCCCCCCCHHH
Q ss_pred chHHHHHHHHHHHHHHHHhhcch-----hhHHHHHHHHHHHHHHHHHHhhhhhccccc-cccCchhhHHHHhhHHHHHHh
Q 002631 678 RDVAVELLHTLVAVHAEVFAGAK-----PLLDKTLGILVEGLIDTFLSLFDENQSNNL-KSLDANGFCQLMLELDYFETI 751 (898)
Q Consensus 678 RpYv~e~Ll~LV~VHaEV~~ia~-----~Lv~rvLs~Lve~va~elL~~f~~~~~~~v-~~f~~~G~lQAtLDiefl~~t 751 (898)
+.|+.. |..|+.+|..-..-.. ..+.+|+...++-+.+.+.++-..-..+.- .-|-.|-+ .+++.+
T Consensus 402 ~d~l~~-L~~il~~~~~s~~~~~~~~~~~~~~~Il~~~idpll~~c~~~a~~L~~~~~~~if~iNCl-------~~i~s~ 473 (618)
T PF06419_consen 402 IDFLSL-LREILDVYDSSLSPDDDRENDNDFKPILDEPIDPLLQMCQKSASPLAPKDDRAIFMINCL-------DLIQST 473 (618)
T ss_pred HHHHHH-HHHHHHHhhcccCCccchhhhhHHHHHHHHHhHHHHHHHHHHhhccCChhhhHHHHHHhH-------HHHHHH
Q ss_pred hccc-CChhHHHHHHHHHHHHHHH-HHhHHHhhhcCCC
Q 002631 752 LNPY-FTHDARESLKNLQGVLLEK-ATVSVAEAVENPG 787 (898)
Q Consensus 752 L~~Y-~t~~A~~~~~~l~~~~~~~-~~e~~~~~~~~~~ 787 (898)
|++| .+..-.+-+....++.++. +-+.++..++.-|
T Consensus 474 L~~~~~~~~~~e~L~~~id~~~~~Lv~~Q~~~lL~~sG 511 (618)
T PF06419_consen 474 LSPFEFTSERVEELQDQIDAHVDTLVEEQASFLLERSG 511 (618)
T ss_pred ccChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
No 39
>cd07674 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. FCH domain Only 1 (FCHO1) may be involved in clathrin-coated vesicle formation. It contains an N-terminal F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in FCHO2 and endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.
Probab=37.23 E-value=5.9e+02 Score=27.84 Aligned_cols=44 Identities=11% Similarity=0.176 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 002631 152 EFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYK 195 (898)
Q Consensus 152 dYd~aV~dY~kak~L~~~~~v~vf~kV~~EVe~ii~~~r~~L~~ 195 (898)
+|...+..|.+++.-+......+|.+...-=++.+..+|..||.
T Consensus 165 ~y~~~~~ky~~~~~~~~~~m~~~~~~~Q~~Ee~Ri~~lk~~L~~ 208 (261)
T cd07674 165 SLRGSVEKYNRARGDFEQKMLESAQKFQDIEETHLRHMKLLIKG 208 (261)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555555544333233344444444444445555555543
No 40
>PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. This entry represents SHNi-TPR (Sim3-Hif1-NASP interrupted TPR), a sequence that is an interrupted form of TPR repeat [].
Probab=36.94 E-value=27 Score=27.07 Aligned_cols=21 Identities=33% Similarity=0.624 Sum_probs=18.0
Q ss_pred hhhcCChhHHHHHHHHhhhhh
Q 002631 147 SISKGEFDLAVREYKKAKSIA 167 (898)
Q Consensus 147 ~I~~~dYd~aV~dY~kak~L~ 167 (898)
+++.++|++|+.||.++-.+.
T Consensus 11 sle~e~f~qA~~D~~~aL~i~ 31 (38)
T PF10516_consen 11 SLENENFEQAIEDYEKALEIQ 31 (38)
T ss_pred HHHhccHHHHHHHHHHHHHHH
Confidence 477899999999999987764
No 41
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=36.52 E-value=2e+02 Score=36.17 Aligned_cols=107 Identities=16% Similarity=0.211 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhh--hhhHHhH-hhHHHHHHHHhhhhcCCCCCCCchhhHhhHHHHHHHHHhhh
Q 002631 35 SADLEAGALALKTDLKGRTQQRKQLVKDN--FDCFVSC-KTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAF 111 (898)
Q Consensus 35 ~~dL~~gl~~L~r~I~~~~~~Lk~LV~eN--f~kFI~a-kdTId~m~~~~~~~e~~~~~~~t~~L~~~i~~i~~~a~~i~ 111 (898)
..||...+..|+++++.+++.+..+..+. +-+|... ..-++.+...+..|+++ +.+|+++|..=+...-.+|
T Consensus 547 ~~~lE~E~~~lr~elk~kee~~~~~e~~~~~lr~~~~e~~~~~e~L~~aL~amqdk-----~~~LE~sLsaEtriKldLf 621 (697)
T PF09726_consen 547 RRQLESELKKLRRELKQKEEQIRELESELQELRKYEKESEKDTEVLMSALSAMQDK-----NQHLENSLSAETRIKLDLF 621 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH-----HHHHHHhhhHHHHHHHHHH
Confidence 36777888899999999999999998866 4444321 11234444444444332 4568888876555566799
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhh
Q 002631 112 EPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSI 148 (898)
Q Consensus 112 ~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I 148 (898)
..|.+.|.+.+-+.+. +.+|=+.+-+|-.+|.+-+
T Consensus 622 saLg~akrq~ei~~~~--~~~~d~ei~~lk~ki~~~~ 656 (697)
T PF09726_consen 622 SALGDAKRQLEIAQGQ--LRKKDKEIEELKAKIAQLL 656 (697)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 9999999998877653 4667777777777666554
No 42
>KOG0972 consensus Huntingtin interacting protein 1 (Hip1) interactor Hippi [Signal transduction mechanisms]
Probab=35.68 E-value=4.3e+02 Score=29.68 Aligned_cols=88 Identities=16% Similarity=0.223 Sum_probs=62.3
Q ss_pred HHhhhcccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhhc
Q 002631 6 MQIFAEKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE 85 (898)
Q Consensus 6 ~~~lr~~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~e 85 (898)
|..++.. |-+..=+.+.||.++|++ +...|..+...-+.++.+|+.||. +|-++++++..++...++..
T Consensus 232 M~s~~~n--Ie~~~~~~~~~Ldklh~e-----it~~LEkI~SREK~lNnqL~~l~q----~fr~a~~~lse~~e~y~q~~ 300 (384)
T KOG0972|consen 232 MNSMHKN--IEQKVGNVGPYLDKLHKE-----ITKALEKIASREKSLNNQLASLMQ----KFRRATDTLSELREKYKQAS 300 (384)
T ss_pred HHHHHHH--HHHhhcchhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhc
Confidence 4444432 334445678899999965 556777777777888888888874 79999999999998888765
Q ss_pred CCCCCCCchhhHhhHHHHHH
Q 002631 86 EDPEGSGTAHLFKLMQGVSS 105 (898)
Q Consensus 86 ~~~~~~~t~~L~~~i~~i~~ 105 (898)
..++. -|..|.+.|.++..
T Consensus 301 ~gv~~-rT~~L~eVm~e~E~ 319 (384)
T KOG0972|consen 301 VGVSS-RTETLDEVMDEIEQ 319 (384)
T ss_pred ccHHH-HHHHHHHHHHHHHH
Confidence 55432 45667666666543
No 43
>KOG4451 consensus Uncharacterized conserved protein (tumor-associated antigen HCA127 in humans) [Function unknown]
Probab=34.64 E-value=50 Score=35.32 Aligned_cols=118 Identities=16% Similarity=0.179 Sum_probs=69.5
Q ss_pred hHHhhhcccCCCCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhh
Q 002631 5 YMQIFAEKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRI 84 (898)
Q Consensus 5 ~~~~lr~~~~isS~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~ 84 (898)
||+.|-.--+|.|+.|.=..|=..+... ....+.=++-.+...-+|-.|+.+|..+ -+-||.++.++..|
T Consensus 14 ~~~Kle~ik~Ir~ktl~~ek~k~r~~~e------i~a~~~ee~~leey~~em~~lL~ekm~H----veelr~iHadiN~m 83 (286)
T KOG4451|consen 14 FLQKLELIKSIRSKTLFFEKFKERCRFE------ICAFTWEEENLEEYELEMGVLLLEKMGH----VEELREIHADINEM 83 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhhcchHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHH
Confidence 5555555555555554333322221111 1222333455667778899999999998 56678888777665
Q ss_pred cCCCCCCCchhhHhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhHHh
Q 002631 85 EEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTL 137 (898)
Q Consensus 85 e~~~~~~~t~~L~~~i~~i~~~a~~i~~pLle~r~KaekLr~vl~~L~r~kfL 137 (898)
+.+-.. ..+..+.+.+.+..+...-++.+..++.+|...-=|..++.|
T Consensus 84 en~ikq-----~k~~~~~~~~~~~r~~eey~~lk~h~d~lR~~~lgl~~L~Dl 131 (286)
T KOG4451|consen 84 ENDIKQ-----VKALEQHITSCNGRKGEEYMELKSHADELRQINLGLNTLEDL 131 (286)
T ss_pred HHHHHH-----HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHhcCccchhhH
Confidence 442111 223334455566777888889999999999765444444443
No 44
>cd07657 F-BAR_Fes_Fer The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) and Fer (Fes related) tyrosine kinases. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Fes (feline sarcoma), also called Fps (Fujinami poultry sarcoma), and Fer (Fes related) are cytoplasmic (or nonreceptor) tyrosine kinases that play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Although Fes and Fer show redundancy in their biological functions, they show differences in their expression patterns. Fer is ubiquitously expressed while Fes is expressed predominantly in myeloid and endothelial cells. Fes and Fer contain an N-terminal F-BAR domain, an SH2 domain, and a C-terminal catalytic kinase domain. F-BAR domains form banana-shaped dimers with a posit
Probab=33.11 E-value=6.6e+02 Score=27.22 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhh
Q 002631 33 TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKR 83 (898)
Q Consensus 33 tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~ 83 (898)
.|+.+++.+.+.+.++.+...+.|..-|-+++..++.-+..+++-+.+.-.
T Consensus 65 ~sW~~iL~ete~~A~~~~~~ae~l~~~i~~~l~~l~~~~~~~rK~~~~~~~ 115 (237)
T cd07657 65 KSWKEIMDSTDQLSKLIKQHAEALESGTLDKLTLLIKDKRKAKKAYQEERQ 115 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 349999999999999999999999999999999999999999988866644
No 45
>PF03670 UPF0184: Uncharacterised protein family (UPF0184); InterPro: IPR022788 This family of proteins has no known function.
Probab=30.39 E-value=53 Score=29.95 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhh
Q 002631 32 NTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKR 83 (898)
Q Consensus 32 ~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~ 83 (898)
+.+++.|...|++|++.-+.+.+.|+.|+.+| +.++.+|++
T Consensus 32 ns~LD~Lns~LD~LE~rnD~l~~~L~~LLesn-----------rq~R~e~~~ 72 (83)
T PF03670_consen 32 NSMLDQLNSCLDHLEQRNDHLHAQLQELLESN-----------RQIRLEFQE 72 (83)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-----------HHHHHHHHH
Confidence 57899999999999999999999999999998 455666654
No 46
>PF05837 CENP-H: Centromere protein H (CENP-H); InterPro: IPR008426 Chromosome segregation in eukaryotes requires the kinetochore, a multi-protein structure that assembles on centromeric DNA, and which acts to link chromosomes to spindle microtubules. Kinetochore structure and composition is highly conserved among vertebrates. The inner kinetochore is essential for kinetochore assembly, and is involved in chromosome segregation via regulation of the spindle. Inner kinetochore components include the multi-subunit CENP-H/I complex, which may function, in part, in directing centromere protein A (CENP-A) deposition to centromeres, where CENP-A is a centromere-specific histone H3 variant required for the organisation of centromeric chromatin during interphase. The CENP-H/I complex contains three functional classes of proteins [, ]: CENP-H class (includes CENP-H, -I, -K, -L) CENP-M class (includes CENP-M) CENP-O class (includes CENP-O, -P, -Q, -R, -50) CENP-H is required for the localisation of CENP-C, but not CENP-A, to the centromere. However, it may be involved in the incorporation of newly synthesised CENP-A into centromeres via its interaction with the CENP-A/CENP-HI complex. CENP-H contains a coiled-coil structure and a nuclear localisation signal. CENP-H is specifically and constitutively localised in kinetochores throughout the cell cycle, and may play a role in kinetochore organisation and function throughout the cell cycle []. Studies show that CENP-H may be associated with certain human cancers [, ]. This entry also includes Kinetochore protein Fta3 which is a subunit of the Sim4 complex. This complex is required for loading the DASH complex onto the kinetochore via interaction with dad1. Fta2, Fta3 and Fta4 associate with the central core and inner repeat region of the centromere [].; GO: 0043515 kinetochore binding, 0007059 chromosome segregation, 0051301 cell division, 0000777 condensed chromosome kinetochore, 0005634 nucleus
Probab=30.29 E-value=38 Score=32.10 Aligned_cols=40 Identities=18% Similarity=0.431 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCC
Q 002631 632 MSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPA 673 (898)
Q Consensus 632 ~~l~qLd~~Lfe~Y~~~k~~~L~~~I~~gil~~g~dW~~~~~ 673 (898)
..+..++..+= .-+.+...+.++...=|+.+|+||...|.
T Consensus 58 ~~l~~~~~~lk--~~r~~~~v~k~v~q~lI~gSgVdWa~D~~ 97 (106)
T PF05837_consen 58 EKLEKLEKELK--KSRQRWRVMKNVFQALIVGSGVDWAEDPK 97 (106)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCcccCHH
Confidence 33555555542 34567778888888889999999999864
No 47
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=28.13 E-value=7.9e+02 Score=30.09 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=51.6
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhh--cccchhHHHHHHHHHHHHH
Q 002631 109 RAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIA--LPSHVNILKRVLEEVEKVM 186 (898)
Q Consensus 109 ~i~~pLle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~--~~~~v~vf~kV~~EVe~ii 186 (898)
.+...-.+.+.++++++..+.-++|.=---+||+.=...+. .|..+-+...+...-. ++-++..+.+-+.++...+
T Consensus 408 ~Lrk~E~eAr~kL~~~~~~L~~ikr~l~k~~lpgip~~y~~--~~~~~~~~i~~l~~~L~~g~VNm~ai~~e~~e~~~~~ 485 (569)
T PRK04778 408 GLRKDELEAREKLERYRNKLHEIKRYLEKSNLPGLPEDYLE--MFFEVSDEIEALAEELEEKPINMEAVNRLLEEATEDV 485 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcHHHHH--HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 34445556677777777777777776666677765444443 3444444444433322 3346777777888888888
Q ss_pred HHHHHHH
Q 002631 187 QEFKAML 193 (898)
Q Consensus 187 ~~~r~~L 193 (898)
..+....
T Consensus 486 ~~L~~q~ 492 (569)
T PRK04778 486 ETLEEET 492 (569)
T ss_pred HHHHHHH
Confidence 7777765
No 48
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.40 E-value=1.4e+02 Score=34.84 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=46.7
Q ss_pred CCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHHHhhhh
Q 002631 17 SDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRI 84 (898)
Q Consensus 17 S~~Fdp~~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~~~~~~ 84 (898)
=+-|+|+.|.+.++.--....|...+..+. .+...+=++.|-..+| |++++|.+|+..
T Consensus 282 lE~F~pk~FvsrlLGmGDi~glvek~~ev~--~~d~~el~~kl~~gkF--------tlrd~y~Qfq~i 339 (483)
T KOG0780|consen 282 LEPFDPKPFVSRLLGMGDIEGLVEKVQEVG--KDDAKELVEKLKQGKF--------TLRDFYDQFQNI 339 (483)
T ss_pred cCCCChHHHHHHHhccccHHHHHHHHHHHh--hhhHHHHHHHHHhCCc--------cHHHHHHHHHHH
Confidence 367999999999999999999999998888 4455555555555555 899999999874
No 49
>cd07653 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4), Formin Binding Protein 17 (FBP17), FormiN Binding Protein 1-Like (FNBP1L), and similar proteins. CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. Members of this subfamily typically contain an N-terminal F-BAR domain and a C-terminal SH3 domain. In addition, some members such as FNBP1L contain a central Cdc42-binding HR1 domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged l
Probab=25.72 E-value=8.4e+02 Score=26.07 Aligned_cols=42 Identities=5% Similarity=-0.070 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHH
Q 002631 33 TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTI 74 (898)
Q Consensus 33 tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTI 74 (898)
.++..++.....+.+.-....+.+..-|.+.+..|+......
T Consensus 65 ~aw~~i~~e~~~~a~~H~~~a~~l~~~v~~~l~~~~~~~~~~ 106 (251)
T cd07653 65 KAFRSILNEVNDIAGQHELIAENLNSNVCKELKTLISELRQE 106 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888888889999999999999999876543
No 50
>KOG3771 consensus Amphiphysin [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.50 E-value=6.1e+02 Score=30.26 Aligned_cols=33 Identities=18% Similarity=0.388 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHhhcCcccccc
Q 002631 310 RYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSS 342 (898)
Q Consensus 310 ~fv~~L~~vil~~lp~fWklaqs~~~G~~~k~~ 342 (898)
+--+.+..-|+.+||.+|..-.+|+...|+...
T Consensus 171 ~~fE~lN~~L~eELP~L~~sRv~f~vp~Fqsl~ 203 (460)
T KOG3771|consen 171 QVFEELNNELLEELPALYSSRVGFFVPTFQSLF 203 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchHHHHH
Confidence 444677777999999999999999998887543
No 51
>cd07673 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. The specific function of FCH domain Only 2 (FCHO2) is still unknown. It contains an N-terminal F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in FCHO1 and endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.
Probab=24.76 E-value=9.1e+02 Score=26.62 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=30.4
Q ss_pred cCChhHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 002631 150 KGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSM 197 (898)
Q Consensus 150 ~~dYd~aV~dY~kak~L~~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL 197 (898)
..+|...|+.|.+.+.-+......+|++...==++.+..+|..||.--
T Consensus 170 ~~~Y~~~v~~l~~~~~~~~~~m~~~~~~~Q~~Ee~Ri~~~k~~l~~y~ 217 (269)
T cd07673 170 TESYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIRIKEIIGSYS 217 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888888888877755434445555554444556777777776544
No 52
>PRK03947 prefoldin subunit alpha; Reviewed
Probab=24.36 E-value=5.8e+02 Score=24.95 Aligned_cols=46 Identities=22% Similarity=0.354 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHHH
Q 002631 33 TSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIES 79 (898)
Q Consensus 33 tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~~ 79 (898)
-.+++|...+..+..+++.+...+..| ..=...|-.|++||+.+..
T Consensus 6 ~~l~~l~~~~~~l~~~~~~l~~~~~~l-~~~~~e~~~~~e~l~~l~~ 51 (140)
T PRK03947 6 QELEELAAQLQALQAQIEALQQQLEEL-QASINELDTAKETLEELKS 51 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcc
Confidence 356778888888888888888777765 5566788889999998875
No 53
>PRK14011 prefoldin subunit alpha; Provisional
Probab=23.52 E-value=4.6e+02 Score=26.41 Aligned_cols=44 Identities=0% Similarity=-0.032 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhHHHHHH
Q 002631 34 SSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIE 78 (898)
Q Consensus 34 S~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdTId~m~ 78 (898)
.++.+...++.+..+++.++.++.. +..=-.+|.+|+++|..+.
T Consensus 4 elq~~~~~l~~~~~qie~L~~si~~-L~~a~~e~~~~ie~L~~l~ 47 (144)
T PRK14011 4 ELQNQFMALEVYNQQVQKLQEELSS-IDMMKMELLKSIESMEGLK 47 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHccC
Confidence 4677788888888888888888877 5666788999999998554
No 54
>cd07671 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Proline-Serine-Threonine Phosphatase-Interacting Protein 1 (PSTPIP1), also known as CD2 Binding Protein 1 (CD2BP1), is mainly expressed in hematopoietic cells. It is a binding partner of the cell surface receptor CD2 and PTP-PEST, a tyrosine phosphatase which functions in cell motility and Rac1 regulation. It also plays a role in the activation of the Wiskott-Aldrich syndrome protein (WASP), which couples actin rearrangement and T cell activation. Mutations in the gene encoding PSTPIP1 cause the autoinflammatory disorder known as PAPA (pyogenic sterile arthritis, pyoderma gangrenosum, and acne) syndrome. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain. F-BAR
Probab=23.48 E-value=9.7e+02 Score=26.02 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=38.4
Q ss_pred cCChhHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 002631 150 KGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSM 197 (898)
Q Consensus 150 ~~dYd~aV~dY~kak~L~~~~~v~vf~kV~~EVe~ii~~~r~~L~~kL 197 (898)
+.+|..+|+.|.+.+.-+......++.+..+-=++.|+-+|..||.--
T Consensus 173 ~~~Y~~~v~~l~~~~~~w~~~~~~~~~~~Q~lEeeRi~f~K~~lw~~~ 220 (242)
T cd07671 173 ERVYKQNIEQLDKARTEWETEHILTCEVFQLQEDDRITILRNALWVHC 220 (242)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888888888887776666677788888877888999999999543
No 55
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=22.88 E-value=68 Score=22.27 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=10.4
Q ss_pred CCCCCChHHHHHHHHHH
Q 002631 806 QGMTVSPDDLIALAQQY 822 (898)
Q Consensus 806 ~~~~~~~~~~~~~~~~~ 822 (898)
+-|.|||||.-+|.|-+
T Consensus 6 nmmPMSPddy~~l~~~V 22 (23)
T PF12162_consen 6 NMMPMSPDDYDELERMV 22 (23)
T ss_dssp S---S-HHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHhh
Confidence 45789999999988644
No 56
>PF04212 MIT: MIT (microtubule interacting and transport) domain; InterPro: IPR007330 The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.; PDB: 2DL1_A 2JQK_A 1WR0_A 2CPT_A 2JQH_A 2V6Y_A 2JQ9_A 2K3W_A 1YXR_A 3EAB_E ....
Probab=21.80 E-value=2.1e+02 Score=24.45 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=16.3
Q ss_pred cCChhHHHHHHHHhhhhh
Q 002631 150 KGEFDLAVREYKKAKSIA 167 (898)
Q Consensus 150 ~~dYd~aV~dY~kak~L~ 167 (898)
.|+|+.|++.|..|-.++
T Consensus 18 ~g~~~~A~~~Y~~ai~~l 35 (69)
T PF04212_consen 18 AGNYEEALELYKEAIEYL 35 (69)
T ss_dssp TTSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 799999999999998864
No 57
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=21.46 E-value=1e+03 Score=30.48 Aligned_cols=144 Identities=11% Similarity=0.144 Sum_probs=86.3
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhH-HHHHHHHhhhhcCCCCCCCchhhHhhHHH
Q 002631 24 LFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTT-IDDIESKLKRIEEDPEGSGTAHLFKLMQG 102 (898)
Q Consensus 24 ~fL~~vH~~tS~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdT-Id~m~~~~~~~e~~~~~~~t~~L~~~i~~ 102 (898)
-||.++.-+.|.++=..-|.+|....+.+.-+...++. -+++.++|.-. .|.+++.|.+++.. ..+|+..+..
T Consensus 846 s~L~kL~dTKsaDqk~TLLHfLae~~e~kypd~l~F~d-dl~hv~kaSrvnad~ikK~~~~m~~~-----ik~Le~dlk~ 919 (1102)
T KOG1924|consen 846 SFLCKLRDTKSADQKTTLLHFLAEICEEKYPDILKFPD-DLEHVEKASRVNADEIKKNLQQMENQ-----IKKLERDLKN 919 (1102)
T ss_pred HHHHhhccccccchhhHHHHHHHHHHHHhChhhhcchh-hHHHHHhhccccHHHHHHHHHHHHHH-----HHHHHHHHHh
Confidence 36888888888888777788888888888888877777 77777777665 77777777776432 2224433332
Q ss_pred H--HHHHHhhhch-----HHHHHHHHHHHHHHHHHHHHhHHhhcCchhhHhhhhcCChhHHHHHHHHhhhhhc----ccc
Q 002631 103 V--SSQANRAFEP-----LFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL----PSH 171 (898)
Q Consensus 103 i--~~~a~~i~~p-----Lle~r~KaekLr~vl~~L~r~kfLF~LP~~L~~~I~~~dYd~aV~dY~kak~L~~----~~~ 171 (898)
- ....+..|.+ .-+.+++.++|+++++-++ +.|+...++|.---+-+. ..+
T Consensus 920 ~~~~~~e~dkF~ekM~~F~e~a~eq~~~ls~M~~~M~------------------~lye~L~eYyaFd~kkysmEEFFaD 981 (1102)
T KOG1924|consen 920 FKIAGNEHDKFVEKMTSFHEKAREQYSKLSSMHGNME------------------KLYESLGEYYAFDPKKYSMEEFFAD 981 (1102)
T ss_pred cCCCCcchhhHHHHhhHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHeecCcccCcHHHHHHH
Confidence 1 1111122222 2244556666766655443 358888888743211000 025
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 002631 172 VNILKRVLEEVEKVMQEFKA 191 (898)
Q Consensus 172 v~vf~kV~~EVe~ii~~~r~ 191 (898)
+..|+..|.|..+--+.-|+
T Consensus 982 i~tFrnaf~ea~~en~krRe 1001 (1102)
T KOG1924|consen 982 IRTFRNAFLEAVAENEKRRE 1001 (1102)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67777777777655444443
No 58
>cd02683 MIT_1 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in proteins with unknown function, co-occuring with an as yet undescribed domain. The molecular function of the MIT domain is unclear.
Probab=21.39 E-value=2.3e+02 Score=25.30 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=33.8
Q ss_pred hcCChhHHHHHHHHhhhhhcc-----c---chhHHHHHHHHHHHHHHHHHHHHHH
Q 002631 149 SKGEFDLAVREYKKAKSIALP-----S---HVNILKRVLEEVEKVMQEFKAMLYK 195 (898)
Q Consensus 149 ~~~dYd~aV~dY~kak~L~~~-----~---~v~vf~kV~~EVe~ii~~~r~~L~~ 195 (898)
+.|+|+.|+..|..|-..+.. . -...++.-..+.-..++.++..|-+
T Consensus 18 ~~g~y~eAl~~Y~~aie~l~~~lk~e~d~~~k~~~r~ki~eY~~RAE~Lk~~l~~ 72 (77)
T cd02683 18 QEGRFQEALVCYQEGIDLLMQVLKGTKDEAKKKNLRQKISEYMDRAEAIKKRLDQ 72 (77)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 469999999999999886521 1 3455666667777777777777644
No 59
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....
Probab=21.06 E-value=79 Score=22.54 Aligned_cols=21 Identities=19% Similarity=0.452 Sum_probs=16.7
Q ss_pred hhhcCChhHHHHHHHHhhhhh
Q 002631 147 SISKGEFDLAVREYKKAKSIA 167 (898)
Q Consensus 147 ~I~~~dYd~aV~dY~kak~L~ 167 (898)
+...|+|+.|+..|++|..+.
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~ 31 (34)
T PF00515_consen 11 YFQLGDYEEALEYYQRALELD 31 (34)
T ss_dssp HHHTT-HHHHHHHHHHHHHHS
T ss_pred HHHhCCchHHHHHHHHHHHHC
Confidence 456899999999999997764
No 60
>cd07610 FCH_F-BAR The Extended FES-CIP4 Homology (FCH) or F-BAR (FCH and Bin/Amphiphysin/Rvs) domain, a dimerization module that binds and bends membranes. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. F-BAR domain containing proteins, also known as Pombe Cdc15 homology (PCH) family proteins, include Fes and Fer tyrosine kinases, PACSINs/Syndapins, FCHO, PSTPIP, CIP4-like proteins and srGAPs. Many members also contain an SH3 domain and play roles in endocytosis. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules. These tubules have diameters larger than those observed with N-BARs. The F-BAR domains of some members such as NOSTRIN and Rgd1 are important for the subcellular localization of the protein.
Probab=20.59 E-value=8.9e+02 Score=24.45 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhhHHhHhhH
Q 002631 34 SSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTT 73 (898)
Q Consensus 34 S~~dL~~gl~~L~r~I~~~~~~Lk~LV~eNf~kFI~akdT 73 (898)
++..+....+.+.+......+.+..+|.+-+..|......
T Consensus 58 ~w~~~~~e~~~~a~~h~~~a~~l~~~i~~~~~~~~~~~~~ 97 (191)
T cd07610 58 SWNSLREETESAATVHEELSEKLSQLIREPLEKVKEDKEQ 97 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555666666666666666555443
No 61
>PRK14082 hypothetical protein; Provisional
Probab=20.59 E-value=1.8e+02 Score=25.35 Aligned_cols=50 Identities=18% Similarity=0.326 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCh-h-----HHHHHHHHHhcCCCCCChH-HHHH
Q 002631 179 LEEVEKVMQEFKAMLYKSMEDPHIDL-T-----NLENTVRLLLELEPESDPV-WHYL 228 (898)
Q Consensus 179 ~~EVe~ii~~~r~~L~~kL~~~~~s~-~-----e~~~~I~lLleL~~~~dPi-w~~L 228 (898)
-.|++.+|..|.-++.++|...+... + -..++|+..-.+...+-|. |+||
T Consensus 8 ~~e~e~ii~~FepkIkKsL~~T~yqeREDLeQElk~Ki~eK~~~~~~~e~PGF~efi 64 (65)
T PRK14082 8 TEEIEHLIENFSPMIKKKLSNTSYQEREDLEQELKIKIIEKADMLLCQEVPGFWEFI 64 (65)
T ss_pred HHHHHHHHHHccHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHhhcccCCcHHHhh
Confidence 46889999999999999998875432 2 2457777766666666665 6665
No 62
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A.
Probab=20.36 E-value=83 Score=23.32 Aligned_cols=20 Identities=20% Similarity=0.506 Sum_probs=15.6
Q ss_pred hhhcCChhHHHHHHHHhhhh
Q 002631 147 SISKGEFDLAVREYKKAKSI 166 (898)
Q Consensus 147 ~I~~~dYd~aV~dY~kak~L 166 (898)
+.+.|+|+.|+..|.++-.+
T Consensus 9 ~~~~g~~~~Ai~~y~~aL~l 28 (36)
T PF13176_consen 9 YRQQGDYEKAIEYYEQALAL 28 (36)
T ss_dssp HHHCT-HHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh
Confidence 45689999999999997654
No 63
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.
Probab=20.30 E-value=2.2e+02 Score=32.17 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=47.2
Q ss_pred CccchHHHHHHHHHHHHH---HHHhhcchhhHHHHHHHHHHH-HHHHHHHhhhhhccccccccCchhhHHHHhhHHHHHH
Q 002631 675 KGVRDVAVELLHTLVAVH---AEVFAGAKPLLDKTLGILVEG-LIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFET 750 (898)
Q Consensus 675 ~~VRpYv~e~Ll~LV~VH---aEV~~ia~~Lv~rvLs~Lve~-va~elL~~f~~~~~~~v~~f~~~G~lQAtLDiefl~~ 750 (898)
..||.|++.++..+=..+ +||.. .|.+.+..|+.. +...+.+.++. .-+..-++|....++|++.
T Consensus 39 ~~ir~fi~~~~~F~~~~~~~~~eid~----~v~ks~d~lL~~~l~~~L~~~i~~-------~~~l~qi~Qi~iNl~~le~ 107 (311)
T PF04091_consen 39 RQIRSFIEKCYKFSDDLYQSSTEIDD----IVRKSLDRLLTRVLNGSLKSKIRS-------SLNLSQIVQIVINLEYLEK 107 (311)
T ss_dssp HHHHHHHHHHHHHHHHTT--HHHHHH----HHHHHHHHHHHHHHHHHHHHHHT--------TS-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHhHHHHHH
Confidence 689999999888877664 45554 455555555444 55555555542 2688899999999999987
Q ss_pred hhcc
Q 002631 751 ILNP 754 (898)
Q Consensus 751 tL~~ 754 (898)
++..
T Consensus 108 Ac~~ 111 (311)
T PF04091_consen 108 ACKE 111 (311)
T ss_dssp THHH
T ss_pred HHHH
Confidence 7643
Done!