BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002638
(898 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T041|MAPT_ARATH Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana
GN=TOR1 PE=1 SV=2
Length = 864
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/914 (61%), Positives = 668/914 (73%), Gaps = 69/914 (7%)
Query: 3 SQPNKFTKPAKPTSQGQQSSSA--NASRSSSLSSHLAMVEMKQKILTSLSKLADRDTHQI 60
S P AKPT + SS A + S S SL+S AMVE+KQKILTS+SKLADRDT+QI
Sbjct: 2 STPTTSGSAAKPTRPARSSSLATRSCSNSGSLTSFQAMVELKQKILTSISKLADRDTYQI 61
Query: 61 AIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTK 120
A+EDLEKTIQ+L+ E+LPM LNCLY+S +DPKPAVKKE + LL+ VC LH + T+ H+TK
Sbjct: 62 AVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECLHLLSYVCSLHCDSTAAHLTK 121
Query: 121 IISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGKEENNGT-----VVGLFVKPLFEAMM 175
II+ IVKRLKDSDSG+++ACRD+IG+LS +YL GKEE T VGLFVKPLFEAM
Sbjct: 122 IIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAMG 181
Query: 176 EQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLLPVVGSLSQ 235
EQNK VQSGA+MCMA+MVE A+ PPV +FQKLC RICKLLSN +F+AKASLLPVV SLSQ
Sbjct: 182 EQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKLLSNSSFLAKASLLPVVSSLSQ 241
Query: 236 VGAIAPQSLEPLLQSIHECLGSTDWATRKAAADALSALALHSSNLVIDGATSTLTVLEAC 295
VGAIAPQSLE LL+SIH+CLGSTDW TRKAAA+ L+ALA HSS L+ + ST+TVLE C
Sbjct: 242 VGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETC 301
Query: 296 RFDKIKPVRDSMNEALQLWKKIAGK-VDVGSDDQKSSPVPGGKAPEPGEDLKNLNPSDKR 354
RFDKIKPVR+S+ EALQLWKKI+GK VD SDD K S + + GE NL
Sbjct: 302 RFDKIKPVRESVTEALQLWKKISGKYVDGASDDSKLSASEQLGSEKNGEKRSNL------ 355
Query: 355 AELSAKGPLNGSSPASASLTKGKAGNISEKAVVILKKKAPALSDKELNPEFFQNLSRGSG 414
A+L K +GS+ + S +KGK G EKAV +LKKKAP LSDK+ NPEFFQ L R
Sbjct: 356 ADLMKKEASDGSTLSPDSASKGK-GCFPEKAVGLLKKKAPVLSDKDFNPEFFQRLERRQS 414
Query: 415 DLPVEVVVPRRCLNSSNSNNEEESDPSDLDSKGRSNRMGNSQTDDFSVSLNNKHRSIDRG 474
VEVVVPRRC N N+EEES DL++ G SNR+ N+Q DD V +G
Sbjct: 415 ---VEVVVPRRCKN----NDEEESGLDDLNAMGSSNRLKNTQADDKQV----------KG 457
Query: 475 TAGGNGKDPRMRAPDVE-----RELSGNRAGFSKTDSQAEGSFINNKGNWLAIQRQLMQL 529
GNG R D +E G+ A S TD+Q+EGSF +N+GNW AIQRQL+QL
Sbjct: 458 RFDGNGSQARTSGDDKAGVVNGKETPGHHAPVSNTDNQSEGSFTSNRGNWSAIQRQLLQL 517
Query: 530 ERQQAHLMNMLQDFMGGSHDSMVTLENRVRGLERVVEDMARDLSISSGRRGSNFAMGFEG 589
ERQQ +LMNMLQ+F+GGSHDSMVTLE RVRGLER+VEDMARDLSISSGRR +N GF
Sbjct: 518 ERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSISSGRR-ANLTAGF-- 574
Query: 590 SNNRSLGKYNGFAEYSGTKYNGRTPFGERFAQSDGVAASTRGRGPSWRSDMSDAWDFTAY 649
GKYN FA Y KYNGR P GER +Q+DG RG W SDM+D W +
Sbjct: 575 ------GKYNSFANYPTGKYNGRAP-GERGSQTDGAM-----RGRMWNSDMADDWFIPPH 622
Query: 650 CASRNGQLGSRRAPGGGPVDSRSPKSE-HDNDQVG-GRRAWD-KGTGPVRLGEGPSARSV 706
ASRNGQ G RR SP+SE ++N+ +G GRR WD K +G +R GEGPSARSV
Sbjct: 623 AASRNGQAGPRR----------SPRSEQYENEHMGNGRRGWDNKASGTIRFGEGPSARSV 672
Query: 707 WQASKDEATLEAIRVAGEDSGTSRSARVAI-PELTAEAMGDD-NVGQERDPIWTSWTNAM 764
WQASKDEATLEAIRVAGED R RVA+ PE AEAMGDD N GQERDPIW SW+NAM
Sbjct: 673 WQASKDEATLEAIRVAGEDGAVPRPTRVAVAPE--AEAMGDDDNEGQERDPIWVSWSNAM 730
Query: 765 DAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNLF 824
+++VGD+D AYAEV+ GD L++KLMD++GP +DQ+SNE+ANE L+ I QFLL+ +L+
Sbjct: 731 HSLRVGDIDAAYAEVLCAGDQHLVIKLMDKTGPSLDQMSNEIANEALNFISQFLLDHSLY 790
Query: 825 DICLSWIQQLVELVLENGPHVLGIPMELKKELLLNLHEASTTMDPPEDWEGPAPDQLLLQ 884
DICLSW QQL+ELVL++G G+PMELK E+L NL +A +TMDPPEDWEGPAP+QL++Q
Sbjct: 791 DICLSWSQQLLELVLQDGADTFGVPMELKTEILYNLQDACSTMDPPEDWEGPAPEQLVVQ 850
Query: 885 LASAWEIELQQFDK 898
LAS WEI+LQQFDK
Sbjct: 851 LASVWEIDLQQFDK 864
>sp|F4I6M4|SP2L_ARATH Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana
GN=SP2L PE=2 SV=1
Length = 821
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/885 (53%), Positives = 599/885 (67%), Gaps = 123/885 (13%)
Query: 38 MVEMKQKILTSLSKLADRDTHQIAIEDLEKTIQTL--SQESLPMLLNCLYESSNDPKPAV 95
MVE+KQ+ILTSLS+L DRDT+QIA++DLEK + ++ S E LP+LL+CL++SS+D K V
Sbjct: 34 MVELKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPV 93
Query: 96 KKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGK 155
K+ES+RLL+ +C +++L+ + + KIISHIVKRLKD+D+G+++ACRD+IGSLS +L K
Sbjct: 94 KRESIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEK 153
Query: 156 EENNG-----TVVGLFVKPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCAR 210
E NG ++VGLF KPLFEAM EQNK +QSGAA+CM KM++ A++PPV AFQKLC R
Sbjct: 154 EVENGNYVGSSLVGLFAKPLFEAMAEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPR 213
Query: 211 ICKLLSNQNFMAKASLLPVVGSLSQVGAIAPQSLEPLLQSIHECLGSTDWATRKAAADAL 270
I KLL++ N++ KASLLPVVGSLSQVGAIAPQSLE LL SIHECLG T+W TRKAAAD L
Sbjct: 214 ISKLLNSPNYITKASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVL 273
Query: 271 SALALHSSNLVIDGATSTLTVLEACRFDKIKPVRDSMNEALQLWKKIAGKVDVGS-DDQK 329
+LA+HSS+LV D STLT LEACRFDKIKPVR+S++EAL +WK IAGK + G+ DDQK
Sbjct: 274 ISLAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGESGTMDDQK 333
Query: 330 SSPVPGGKAPEPGEDLKNLNPSDKRAELSAKGPLNGSSPASASLT-------KGKAGNIS 382
+ S ++ L G + S A L + +
Sbjct: 334 -------------------DVSSEQCILERNGETDSVSCEEAGLVMQGSCDGLSSSSDSI 374
Query: 383 EKAVVILKKKAPALSDKELNPEFFQNL-SRGSGDLPVEVVVPRRCLNSSNSNNEEESDPS 441
KAV+IL+KKAP L+ K+LNPEFFQ L RGSGD+PVEV++P R NSSNSN E+ESD +
Sbjct: 375 SKAVLILRKKAPRLTGKDLNPEFFQKLEKRGSGDMPVEVILPSRQKNSSNSNTEDESDAN 434
Query: 442 DLDSKGRSN---RMGNSQTDDFSVSLNNKHRSIDRGTAGGNGKDPRMRAPDVERELSGNR 498
+ RSN R T + + +D GG + R+RA D G+
Sbjct: 435 TSVLRSRSNGLCRTAGVHTKQRHFGDFAREKWVDERMNGG---ESRLRAFD------GDH 485
Query: 499 AGFSKTDSQAEGSFINNKGNWLAIQRQLMQLERQQAHLMNMLQDFMGGSHDSMVTLENRV 558
+ D+ N+GNW +QRQL+ LERQQ H+MNMLQDFMGGSHD M++LENRV
Sbjct: 486 TEVIQADTS------ENRGNWPPLQRQLLHLERQQTHIMNMLQDFMGGSHDGMISLENRV 539
Query: 559 RGLERVVEDMARDLSISSGRRGSNFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRTPFGER 618
RGLER+VE+M+R++SI SG RG A
Sbjct: 540 RGLERIVEEMSREMSIQSGARGKATA---------------------------------- 565
Query: 619 FAQSDGVAASTRGRGPSWRSDMSDAWDFTAYC-ASRNGQLGSRRAPGGGPVDSRSPKSEH 677
SWRSD+ D WD Y +SRN Q +R+ G GP
Sbjct: 566 ----------------SWRSDV-DGWDSPNYGPSSRNTQTSTRKIRGTGP---------- 598
Query: 678 DNDQVGG-RRAWDKGTGPVRLGEGPSARSVWQASKDEATLEAIRVAGEDSGTSRSARVAI 736
++Q G RRAWDK + +RLGEGPSARSVWQASKDEATLEAIRVAGED GTSR+ RV+I
Sbjct: 599 -SEQSGNSRRAWDKSSVAIRLGEGPSARSVWQASKDEATLEAIRVAGEDCGTSRNRRVSI 657
Query: 737 PELTAEAM---GDDNV-GQERDPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLM 792
PE AEAM DDN GQ+ DPIWT W+N++ A++VGD D+A+AEV+STGDD LLVKLM
Sbjct: 658 PE--AEAMMDEDDDNRGGQQGDPIWTCWSNSVHALRVGDTDSAFAEVLSTGDDHLLVKLM 715
Query: 793 DRSGPVVDQLSNEVANEVLHAIGQFLLEQNLFDICLSWIQQLVELVLENGPHVLGIPMEL 852
D++GPV+DQLS+++ NE +H+I QFLL+ L+DICLSWIQQL+E+ +ENG +GIP+EL
Sbjct: 716 DKTGPVLDQLSSDMGNEAIHSIAQFLLDHTLYDICLSWIQQLLEVSVENGADFMGIPLEL 775
Query: 853 KKELLLNLHEASTTMDPPEDWEGPAPDQLLLQLASAWEIELQQFD 897
KKELLLNLHEA +T DPPEDWEG APD LL++LAS W IE+Q FD
Sbjct: 776 KKELLLNLHEALSTTDPPEDWEGLAPDHLLVELASNWNIEIQHFD 820
>sp|Q9Y7K2|TOR2_SCHPO Phosphatidylinositol 3-kinase tor2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tor2 PE=1 SV=2
Length = 2337
Score = 36.6 bits (83), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 96 KKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMKEACRDSIGSLSKLYLNGK 155
K+E+ +LL L+ L +HV I+ ++ + KDS S + + +S+G + ++
Sbjct: 622 KEENAKLLCLLIAAAPRLIESHVEPILQILLPKAKDSSSIVAASIVNSLGEICQI----- 676
Query: 156 EENNGTVVGLFVKPL----FEAMMEQNKGVQSGAAM 187
+G V+ F+K L EA+ +Q+ ++ AA+
Sbjct: 677 ---SGEVIVPFIKDLMPLIIEALQDQSSPIRRAAAL 709
>sp|P50428|ARSA_MOUSE Arylsulfatase A OS=Mus musculus GN=Arsa PE=2 SV=2
Length = 506
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 558 VRGLERVVEDMARDLSISSGRRGSNFAMGFEGSNNRSLGKYNGFAEYSGTKYNGRTPFGE 617
+ GLE +RDL + R+G F + + + Y F+ S TK +GR PFG+
Sbjct: 193 LPGLEARYVSFSRDLMADAQRQGRPFFLYYASHHTH----YPQFSGQSFTKRSGRGPFGD 248
Query: 618 RFAQSDGVAAS 628
+ DG +
Sbjct: 249 SLMELDGAVGA 259
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 303 VRDSMNEALQLWKKIAGKV-------DVGSDDQKSSPVPGGKAPEPGEDLK 346
+ D + E ++L+K+ KV DV SD++ P P KAPEP D K
Sbjct: 564 INDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPAPDTK 614
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Query: 168 KPLFEAMMEQNKGVQSGAAMCMAKMVECASDPPVVAFQKLCARICKLLSNQNFMAKASLL 227
+PL A+ +Q+ V+ AA+C+AK+ + +P +V Q + LL + N M A+
Sbjct: 124 EPLRHALKDQDPYVRKTAAVCVAKLYDV--NPELVENQGFLNILNDLLGDSNPMVVAN-- 179
Query: 228 PVVGSLSQVGAIAPQ--------SLEPLLQSIHECLGSTDW 260
V SL+++ ++ + +L LL +++EC T+W
Sbjct: 180 -AVASLTEIDEVSKKEVFRIHSGNLNKLLAALNEC---TEW 216
>sp|Q2JS78|OBG_SYNJA GTPase obg OS=Synechococcus sp. (strain JA-3-3Ab) GN=obg PE=3 SV=1
Length = 385
Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 233 LSQVGAIAPQSLEPLLQSIHECLGSTDWATRKAAADALSAL 273
+S + A+A Q LEPLLQ + +CLG R AAA + +
Sbjct: 305 VSAISAVARQGLEPLLQRVWQCLGRDPDLHRPAAASKIQPV 345
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 45 ILTSLSKLADRDTHQIAIEDLEKTIQTLSQESLPMLLNCLYESSNDPKPAVKKESVRLLA 104
I+ ++ K D + + L + +++E++P +L + E N K AV+K+++ L
Sbjct: 123 IVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIMALH 182
Query: 105 LVCELHSELTSTHVTKIISHIVKRLKDSDSGM 136
H + S+ V+ ++S+ KRL D+D G+
Sbjct: 183 ---RFHRKSPSS-VSHLVSNFRKRLCDNDPGV 210
>sp|Q3SYU7|TNPO1_BOVIN Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2
Length = 898
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 84 LYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMK-EAC 140
L+ + D +P V+K R L ++ E+ + H+ I+ ++++R +D D + EAC
Sbjct: 228 LFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEAC 285
>sp|Q92973|TNPO1_HUMAN Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2
Length = 898
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 84 LYESSNDPKPAVKKESVRLLALVCELHSELTSTHVTKIISHIVKRLKDSDSGMK-EAC 140
L+ + D +P V+K R L ++ E+ + H+ I+ ++++R +D D + EAC
Sbjct: 228 LFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEAC 285
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus
GN=CNGB1 PE=1 SV=1
Length = 1394
Score = 33.5 bits (75), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 303 VRDSMNEALQLWKKIAGKV-------DVGSDDQKSSPVPGGKAPEPGEDLK 346
+ D + E ++L+K+ KV DV SD++ P P KAPEP ++K
Sbjct: 678 INDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPAPEVK 728
>sp|Q1LI20|RPOB_RALME DNA-directed RNA polymerase subunit beta OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=rpoB PE=3 SV=1
Length = 1368
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 764 MDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQLSNEVANEVLHAIGQFLLEQNL 823
++A + DLD+A +++S +D+LL +++ ++ ++D + EV + + LLE NL
Sbjct: 273 INAKHIRDLDSAGTKLISVPEDYLLGRVLAKN--IIDPDTGEVIANANDELTETLLE-NL 329
Query: 824 FDICLSWIQQLVELVLENGPHV 845
+ + IQ L L+ GP++
Sbjct: 330 REAGVKDIQTLYTNDLDQGPYI 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,465,211
Number of Sequences: 539616
Number of extensions: 14963559
Number of successful extensions: 43514
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 42443
Number of HSP's gapped (non-prelim): 1056
length of query: 898
length of database: 191,569,459
effective HSP length: 127
effective length of query: 771
effective length of database: 123,038,227
effective search space: 94862473017
effective search space used: 94862473017
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)