Your job contains 1 sequence.
>002641
MRDDVSVVVPCAKLLSKMSGSQASELKELERNYEELLDENCRVFASYFKQVLENSNDSGL
IIVTPPSVVLRKIEKVGGLHFDSEIESSLDKHLNNSSYSSSDSDAEATDEQKNIRMASLE
PRQRQIRKQKQPIFVESSCSPDHLIMADADNPPGIGKHTPPKDFVCPITTHIFDDPVTLE
TGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKRLIASWQEQNPGGLDLSHS
EPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLEAS
MELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESDVE
RIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKEEDFLKMCLKPKSVSVL
LLGQMIGDSEESIVSSIANTIVSSKVFESVISSLEAEWAEERIAAVGILLRCMQEDGKCR
NSIADKAELAPVMESFMAASDGERFEIVCFLSELVKLNRRTFNEQILHIIKDEGTYSSMH
TLLVYLQTANHDQCPVVAGLLLQLDLLAEPRKMSIYREEAIDTLISCLRNSDYPAAQLAA
AKTIVSLQGRFTTSGKSLTRAMLLKRAGVGKSYKNLTRTEQIGNICGEDDDTSEEEKAAD
DWERKMALVLVSHDFGLLFEALEEGLNSRFAELYSACFESATWLIYMLNFLPDTGIFGAA
RVSLLKRFISAFKSANDIDDRALSLLALNSFAQDPQGLRDINIHMKDIMKGLRELRKYSP
LAFEMVKVLSNGHDSSADFWNHRELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVWTG
RGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVRSNDSFTYAIFIQVVD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002641
(897 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 222 6.4e-15 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 210 7.1e-14 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 209 3.0e-13 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 203 1.5e-12 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 199 3.6e-12 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 210 3.8e-12 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 190 5.5e-12 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 197 8.6e-12 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 194 4.0e-11 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 191 4.2e-11 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 190 4.6e-11 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 186 8.1e-11 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 181 1.4e-10 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 183 1.6e-10 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 192 2.4e-10 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 184 6.7e-10 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 190 7.2e-10 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 176 1.1e-09 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 167 1.8e-09 3
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 164 2.3e-09 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 173 3.8e-09 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 168 4.4e-09 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 168 5.1e-09 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 171 8.0e-09 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 167 1.2e-08 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 160 1.3e-08 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 161 2.4e-08 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 161 2.5e-08 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 161 2.6e-08 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 159 3.7e-08 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 152 9.5e-08 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 155 2.6e-07 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 150 4.4e-07 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 156 7.8e-07 2
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 121 3.1e-06 2
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 142 3.2e-06 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 140 5.9e-06 2
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 142 7.8e-06 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 141 1.0e-05 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 139 1.0e-05 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 138 1.0e-05 1
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 110 1.3e-05 2
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 138 2.2e-05 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 133 2.6e-05 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 133 3.5e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 133 3.5e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 133 3.5e-05 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 133 3.5e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 133 3.6e-05 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 131 3.7e-05 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 134 5.8e-05 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 134 6.1e-05 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 130 7.0e-05 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 130 7.5e-05 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 129 9.7e-05 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 125 0.00012 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 127 0.00018 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 138 0.00025 2
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 103 0.00026 2
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 120 0.00034 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 127 0.00035 1
UNIPROTKB|Q9AV81 - symbol:PUB72 "U-box domain-containing ... 95 0.00040 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 119 0.00049 2
GENEDB_PFALCIPARUM|MAL7P1.81 - symbol:MAL7P1.81 "eukaryot... 119 0.00062 1
UNIPROTKB|Q8IBT2 - symbol:MAL7P1.81 "Eukaryotic translati... 119 0.00062 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 99 0.00069 2
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 99 0.00069 2
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 99 0.00069 2
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 99 0.00069 2
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 99 0.00069 2
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 99 0.00073 2
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 99 0.00088 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 118 0.00095 1
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 222 (83.2 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 92/340 (27%), Positives = 156/340 (45%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P+DF+CPI+ + DP + TGQTYER IQ WI+ GN SCP T+QKL + L NY
Sbjct: 242 TIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP-NY 300
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCM 278
VL+ LI+ W + H+ + + NS S + G ++ ++ + L
Sbjct: 301 VLRSLISQWCTK--------HNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLS- 351
Query: 279 SEILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFLL 338
S+ + + AV +I + D +I++++ I V++L + D E + +
Sbjct: 352 SQSIEDRRTAVSEIRSL---SKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCI 408
Query: 339 SELGSRDKSVIHTLTRVESDVERIVALFKKGLLEA-----VVLIDL-LRPSTRTLIE--- 389
L + + L + V IV + + G +EA L L L + +I
Sbjct: 409 LNLSIYEHN--KELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASG 466
Query: 390 --MDMMESLM--TVIKKKEED--FLKMCL----KPKSVS---VLLLGQMIGDSEESIVSS 436
M +++ L +V KK+ +C+ K ++V V L +M+ DS ++
Sbjct: 467 AIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMAD 526
Query: 437 IANTIVSSKVFESVISSLEAEWAEERIAAVGILLRCMQED 476
A TI+S + S+ A+ A R A+ L+ C+Q+D
Sbjct: 527 EALTILSV-----LASNQVAKTAILRANAIPPLIDCLQKD 561
Score = 51 (23.0 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 572 KMSIYREEAIDTLISCLRNSDYPAAQLAAAKTIVSLQGRFTTSGKSLTR 620
K +I R AI LI CL+ D P + AA ++ L R T S+ R
Sbjct: 542 KTAILRANAIPPLIDCLQK-DQPRNRENAAAILLCLCKRDTEKLISIGR 589
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 210 (79.0 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 48/114 (42%), Positives = 68/114 (59%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P +F CPI+ + DPV + TGQTYER I++WI G+ +CP T+QK+S++ L NY
Sbjct: 272 TIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTP-NY 330
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVIS---QATIDGTITEL 269
VL+ LI+ W E N G+ EP +S P N P S +A ID +++L
Sbjct: 331 VLRSLISQWCETN--GM-----EPPKRSTQP-NKPTPACSSSERANIDALLSKL 376
Score = 55 (24.4 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 35/141 (24%), Positives = 56/141 (39%)
Query: 512 SELVKLNRRTFNEQILHIIKDEGTYSSMHTLLVY--LQTANHDQCPVVAGXXXXXXXXAE 569
+EL L +R N +I I + G + +LL L+T H A E
Sbjct: 389 AELRLLAKRNANNRIC--IAEAGAIPLLLSLLSSSDLRTQEH------AVTALLNLSIHE 440
Query: 570 PRKMSIYREEAIDTLISCLRNSDYPAAQLAAAKTIVSL----QGRFTTSGKSLTRAMLLK 625
K SI A+ +++ L+N A + AAA T+ SL + + T G A+++
Sbjct: 441 DNKASIISSGAVPSIVHVLKNGSMEARENAAA-TLFSLSVIDEYKVTIGGMGAIPALVVL 499
Query: 626 RAGVGKSYKNLTRTEQIGNIC 646
G G + N+C
Sbjct: 500 -LGEGSQRGKKDAAAALFNLC 519
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 209 (78.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 99/396 (25%), Positives = 173/396 (43%)
Query: 142 DHLIMADADNPPGIGKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSC 201
D ++ + D K T P DF+CP++ + DPV + TGQTYER IQ WI+ GN +C
Sbjct: 223 DKMVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTC 282
Query: 202 PITRQKLSSTKLPKTNYVLKRLIASW-QEQN---PGGLDLSHSEPMSKSIVPSNSPNSVI 257
P T+QKL + L NYVL+ LI+ W E N P G ++ V +
Sbjct: 283 PKTQQKLENFTLTP-NYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLS 341
Query: 258 SQATID--GTITELKHAITSLCMSEILNESEMAV-LQIERCWLE--ASMELDIQIMLSKP 312
S++T D ++E++ + IL A+ + + E A+ E I +L+
Sbjct: 342 SRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLS 401
Query: 313 AVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESDVERIVALFKKGLLE 372
N I+F +++ + + +R+ + + +D +I+ + G +
Sbjct: 402 IYENNKELIMFAGAVTSIVQ--VLRAGTMEARENAAATLFSLSLADENKII-IGGSGAIP 458
Query: 373 AVVLIDLLRPSTRTLIEMDMMESL--MTVIKKKEEDFLKMCLKPKSVSVL---LLGQMIG 427
A L+DLL T + D +L + + + ++ + V +L +M+
Sbjct: 459 A--LVDLLENGTPRG-KKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMV- 514
Query: 428 DSEESIVSSIANT------IVSSKVFESVISSLEAEWAEERIAAVGILLRCMQEDGKCRN 481
D +I+S +AN IV + ++I L+ + R A ILL + D +
Sbjct: 515 DEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLI 574
Query: 482 SIADKAELAPVME-SFMAASDGERFEIVCFLSELVK 516
+I + P+M+ S G+R I L EL++
Sbjct: 575 TIGRLGAVVPLMDLSKNGTERGKRKAIS--LLELLR 608
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF CPI+ + DPV + +GQTYER I++WIE G+S+CP T+Q L+ST L NYVL
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTP-NYVL 315
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVP 249
+ LIA W E N D+ +P S S+ P
Sbjct: 316 RSLIAQWCEAN----DIEPPKPPS-SLRP 339
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 199 (75.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/106 (40%), Positives = 62/106 (58%)
Query: 142 DHLIMADADNPPGIGKHTP--PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNS 199
DH A I +P P +F CPI+ + DPV + +GQTYER IQ+W++ G+
Sbjct: 208 DHANDALTTRSASIKHRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHK 267
Query: 200 SCPITRQKLSSTKLPKTNYVLKRLIASWQEQNPGGLDLSHSEPMSK 245
+CP T+Q LS T L N+VLK LI+ W E N G++L ++ S+
Sbjct: 268 TCPKTQQPLSHTSLTP-NFVLKSLISQWCEAN--GIELPKNKQNSR 310
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 210 (79.0 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 64/208 (30%), Positives = 104/208 (50%)
Query: 142 DHLIMADADNPPGIG-----KH-TP--PKDFVCPITTHIFDDPVTLETGQTYERRAIQEW 193
D + M +D P G +H +P P+ F CPI+ + DPV + TGQTYER +IQ+W
Sbjct: 222 DFVTMESSDPDPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKW 281
Query: 194 IERGNSSCPITRQKLSSTKLPKTNYVLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSP 253
++ G+ +CP +++ L L NYVLK LIA W E N G++L ++ ++ S
Sbjct: 282 LDAGHKTCPKSQETLLHAGLTP-NYVLKSLIALWCESN--GIELPQNQGSCRTTKIGGSS 338
Query: 254 NSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLEASMELDIQIMLSKPA 313
+S + + + +L + T E + A R L A +D ++ +++
Sbjct: 339 SSDCDRTFVLSLLEKLANGTT---------EQQRAAAGELR--LLAKRNVDNRVCIAEAG 387
Query: 314 VINGFVEILFNSVDPRVLEATIFLLSEL 341
I VE+L +S DPR E ++ L L
Sbjct: 388 AIPLLVELL-SSPDPRTQEHSVTALLNL 414
Score = 37 (18.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 15 LSKMSGSQASELKELERNYEELLDEN 40
+ K+ G + L +EEL+D N
Sbjct: 33 IGKIQGDLVRRITLLSPFFEELIDVN 58
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 190 (71.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 45/104 (43%), Positives = 62/104 (59%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G++SCP T+Q+L L NY
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTP-NYC 333
Query: 220 LKRLIASWQEQN--------PGGLDLSHSEPMSKSIVPSNSPNS 255
+K LIASW EQN P LDL++ ++ S S SPNS
Sbjct: 334 VKGLIASWCEQNGITVPTGPPESLDLNYWR-LAMS--DSESPNS 374
Score = 59 (25.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 389 EMDMMESLMTV--IKKKEEDFLKMCLKPKSVSVLLLGQMIGDSEESIVSSIANTIVSS-- 444
E++++E + I KEED K C ++V +LL D+EE+ + AN V +
Sbjct: 418 EINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLK-----DNEEARILMGANGFVEAFL 472
Query: 445 KVFESVISSLEAEWAEERIAAVGILLRCMQEDGKCRNS-IADKAELAPVMESFMAASDGE 503
+ ES + A A + A+ + + + RN + + + P++E ++ S +
Sbjct: 473 QFLESAVHDNNA--AAQETGAMALFNLAVNNN---RNKELMLTSGVIPLLEKMISCSQSQ 527
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 197 (74.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 58/186 (31%), Positives = 94/186 (50%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G+++CP T Q+LS L NY
Sbjct: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTP-NYC 337
Query: 220 LKRLIASWQEQN----PGG----LDLSHSEPMSKSIVPSNSPNSV--ISQATI-DGTITE 268
+K LI+SW EQN P G LDL++ ++ S+ S S + + D +
Sbjct: 338 VKALISSWCEQNGVQVPDGPPESLDLNYWR-LALSVSESTDTRSAKRVGSCKLKDVKVVP 396
Query: 269 LKHAIT---SLCMSEILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNS 325
L+ + T C SE E ++ + +ERC + D+ + K V+ +L +
Sbjct: 397 LEESGTIKEEACESEY-QEDQVTL--VERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDD 453
Query: 326 VDPRVL 331
+ R+L
Sbjct: 454 EEARIL 459
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 194 (73.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 64/219 (29%), Positives = 106/219 (48%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSS-TKLPKTNYV 219
P F CPI+ + DPVT+ TGQTY+R +I WI GN++CP+TR LS T +P N+
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIP--NHT 72
Query: 220 LKRLIASWQEQN-PGGLDLSHSEPMSKSIVPSNSPNSVISQAT-IDGTITELKHAITSLC 277
L+RLI W N G++ P K S S++SQA+ I GT ++ ++
Sbjct: 73 LRRLIQEWCVANRSNGVERI---PTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIR 129
Query: 278 -MSEILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIF 336
+ + +SE + I + E+ ++I+ + + E++ S+ VL
Sbjct: 130 RLRGLARDSEKNRVLIAG---HNAREILVRILFADIETTSLSSELVSESLALLVLLHMTE 186
Query: 337 LLSELGSRDKSVIHTLTRVESDVERIVALFKKGLLEAVV 375
E + D S + +TR+ D + + L+E V+
Sbjct: 187 TECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVL 225
Score = 37 (18.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 443 SSKVFESVISSLEAEWAEERIAAVGI 468
S +FE V+ L+ + R +GI
Sbjct: 240 SDSIFEGVLDLLKNPISSRRALKIGI 265
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 191 (72.3 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 80/338 (23%), Positives = 155/338 (45%)
Query: 164 FVCPITTHIFDDPVTLETGQTYERRAIQEWIE--RGNS---SCPITRQKLSSTKLPKTNY 218
F+CP+T + +PVTLE GQT+ER AI++W + R N SCPIT ++LS T L +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL-SPSI 87
Query: 219 VLKRLIASWQEQNPG-GLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLC 277
L+ I W+ +N LD++ +S+ N+ +++ + E+ I +
Sbjct: 88 ALRNTIEEWRARNDALKLDIAR-----QSLYLGNAETNILLALK---NVREICRNIRKI- 138
Query: 278 MSEILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFL 337
+ N V I +S E+ + + + V+ G E + + +
Sbjct: 139 RQRVCNPQ--LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKF 196
Query: 338 LSELGSRDK----SVIHTLTRVESDVERIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMM 393
LS+ S+ + SV+ L++ E+ E+I ++ G + ++L+ L + + ++
Sbjct: 197 LSQEPSKGREAAVSVLFELSKSEALCEKIGSIH--GAI--ILLVGLTSSKSENVSTVEKA 252
Query: 394 ESLMTVIKKKEEDFLKMCLKPKSVSVLLLGQMIGDSEESIVS--------SIAN---TIV 442
+ +T +++ EE+ +M + + LL +++ S E+ VS ++ N IV
Sbjct: 253 DKTLTNLERSEENVRQMAINGRLQP--LLAKLLEGSPETKVSMAFYLGVLALNNDVKVIV 310
Query: 443 SSKVFESVISSLEAEWAEERIAAVGILLRCMQEDGKCR 480
+ V S+I + +R AA+G L +G +
Sbjct: 311 AQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAK 348
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 190 (71.9 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 93/354 (26%), Positives = 158/354 (44%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T PKDFVCPI+ + DPV + TGQTY+R +I WIE G+ +CP T Q L +++ N
Sbjct: 304 TVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP-NR 362
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCM 278
LK LI W + G +S+ + +SPN + A E A S+ +
Sbjct: 363 ALKNLIVQWCTAS-G---ISYESEFT------DSPNESFASALPTKAAVEANKATVSILI 412
Query: 279 SEILNESEMA-VLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFL 337
+ + S+ A + L A + + +++ I +L S + E ++
Sbjct: 413 KYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLL-TSENAIAQENSVTA 471
Query: 338 LSELGSRDKSVIHTLTRVESD-VERIVALFKKGL-LEA-----VVLIDL--LRPSTRTLI 388
+ L +K+ + E D +E IV++ GL +EA L L + + +
Sbjct: 472 MLNLSIYEKNKSRIME--EGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIA 529
Query: 389 EMDM-MESLMTVIK----KKEEDFLKMCLKPKSVSVLLLGQMI-GDSEESIVSSIANTIV 442
+D +E+L +++ + ++D + L S +MI G S+V ++ N V
Sbjct: 530 IVDQCVEALALLLQNGTPRGKKDAVT-ALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGV 588
Query: 443 SSKVFES----VISSLEAEW-AEERIAAVGIL--LRCMQEDGKCRNSIADKAEL 489
+ + + V SL AE +E A G++ +RC GK N++A EL
Sbjct: 589 AEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGK-ENAVAALLEL 641
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 186 (70.5 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 45/129 (34%), Positives = 70/129 (54%)
Query: 140 SPDHLIMADADNPPGIGKH--TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERG 197
S D + A+A +H T P+ F C ++ + DPV + +G T+ER IQ+W + G
Sbjct: 197 SIDDSLHANAAEAEASEEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEG 256
Query: 198 NSSCPITRQKLSSTKLPKTNYVLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVI 257
N SCPI+++KL L K N LK I+ W +N GLD+ +P K + SNS + +
Sbjct: 257 NDSCPISKRKLDDFTL-KPNVELKSQISEWCAKN--GLDVQ--DPARKHVKASNSIDFSV 311
Query: 258 SQATIDGTI 266
S A+ ++
Sbjct: 312 SIASFGSSL 320
Score = 51 (23.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 449 SVISSLEAEWAEERIAAVGILLR-CMQEDGKCRNSIADKAELAPVMESFMAASDGERFEI 507
S+ LE+ EE+ A+ ILL+ C+Q+ C + + + + S + S+ E+
Sbjct: 588 SIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATD---IYSSLILISNNGTEEV 644
Query: 508 VCFLSELVK 516
SEL++
Sbjct: 645 KVSASELLR 653
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 181 (68.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G+++CP T+Q+L L N V
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 220 LKRLIASWQEQNPGGLDLSHSEPMSKSI 247
K LIASW EQN G + P S+ +
Sbjct: 332 -KGLIASWCEQN--GTQIPSGPPESQDL 356
Score = 55 (24.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 544 VYLQTANHDQCPVVAGXXXXXXXXAEPRKMSIYREEAIDTLISCLRNSDY-P-AAQLAAA 601
+YL + D+ V G + + I + +D L + S Y P L ++
Sbjct: 533 LYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSS 592
Query: 602 KTIVSLQGRFTTSGKSL----TRAMLLKRAGVGKSYKNLTRTE-QIGNICGEDD--DTSE 654
I SLQG ++G++L + A+LL A + ++ I ++ D DT+E
Sbjct: 593 NIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE 652
Query: 655 EEKA 658
+E+A
Sbjct: 653 QEQA 656
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 183 (69.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSS-CPITRQKLSS-TKLPKTNY 218
P F CPI+ + DPVT+ TGQTY+R +I+ W+ GN++ CP+TR LS T +P N+
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIP--NH 72
Query: 219 VLKRLIASWQEQN-PGGLDLSHSEPMSKSIVPSNSPNSVISQAT-IDGTITELKHAITSL 276
L+RLI W N G++ P K S +++SQA+ I GT ++ +L
Sbjct: 73 TLRRLIQEWCVANRSNGVERI---PTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 129
Score = 43 (20.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 427 GDSEESIVSSIANTIVSSKVFESVISSLEAEWAEERIAAVGI 468
G + SI+N S VFE V+ L + R +GI
Sbjct: 225 GTKSADLKGSISN---SESVFEGVLDLLRNPISSRRALKIGI 263
Score = 37 (18.1 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 451 ISSLEAEWAEERIAAVGILLRCM-QEDGKCRNSIADKAE 488
+ + E W EE A G++++ + +C KA+
Sbjct: 353 LCTAEERWREEA-AGAGVVVQLLLMVQSECTERAKKKAQ 390
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 192 (72.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 40/116 (34%), Positives = 63/116 (54%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT I DPV + TGQTYE+ +IQ+W + G+ +CP TRQ+L L N+ L
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAP-NFAL 349
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSL 276
K LI W E+N + P S++ S++ +A + E + ++ +
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPDSQN--EQKDEVSLLVEALSSSQLEEQRRSVKQM 403
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 318 FVEILFNSV---DPRVLEATIFLLSELGSRDKSVI 349
F+E L + P+ E +L ELGS + S I
Sbjct: 586 FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFI 620
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 184 (69.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF C ++ + DPV + +GQT+ER IQ+WI+ G CP TRQ LS T L N+++
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTP-NFIV 299
Query: 221 KRLIASWQEQN----PGGLDLSHS-EP---MSKSIVPSNSPN 254
+ +ASW E N P L+L HS EP + +S+ S+S N
Sbjct: 300 RAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSEN 341
Score = 44 (20.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 530 IKDEGTYSSMHT----LLVYLQTANHDQCPVVAGXXXXXXXXAEPRKMSIYREEAIDTLI 585
+++ G+ SS+ T L+ L++++ D + ++ I R EAI +L+
Sbjct: 410 VRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLV 469
Query: 586 SCLRNSDYPAAQLAAAKTIVSLQGRFTTSGKSL 618
S L ++D Q A +++L + KSL
Sbjct: 470 SLLYSTD-ERIQADAVTCLLNLS--INDNNKSL 499
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 190 (71.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 82/346 (23%), Positives = 160/346 (46%)
Query: 164 FVCPITTHIFDDPVTLETGQTYERRAIQEWIER----GNS-SCPITRQKLSSTKLPKTNY 218
F+CP+T + DPVTLE G+T+ER AI++W + G SCP+T Q+L+ST + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDV-SASI 85
Query: 219 VLKRLIASWQEQNPGG-LDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLC 277
L+ I W+ +N LD++ + + ++ +++ I TI +H + +
Sbjct: 86 ALRNTIEEWRSRNDAAKLDIAR-QSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 278 MSEILNESEMAVLQIERCWLEASMELDIQIM---LSKPAVING-FVEIL--FNSVDP-RV 330
+ ++ +M R +A L + + SK V G V L F S +P +
Sbjct: 145 LIHMI--IDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKG 202
Query: 331 LEATIFLLSELGSRDKSVIHTLTRVESDVERIVALFKKGLLEAVVLIDLLRPSTRTLIEM 390
EA + LL EL S+ +++ + + + +V L E V +++ + RTL M
Sbjct: 203 REAAVSLLFEL-SKSEALCEKIGSIHGALILLVGLTSSNS-ENVSIVE---KADRTLENM 257
Query: 391 DMMESLMTVIKK--KEEDFLKMCLKPKSVSVLLLGQMIGDSEESIVSSIANTIVSSKVFE 448
+ E ++ + + + L L+ + L + +G E +++ +V+ V
Sbjct: 258 ERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLG---ELPLNNDVKVLVAQTVGS 314
Query: 449 SVISSLEAEWAEERIAAVGILLRCMQEDGKCRNSIADKAELAPVME 494
S++ + + +R AA+ L + +G + I+ K L P+++
Sbjct: 315 SLVDLMRSGDMPQREAALKALNKISSFEGSAKVLIS-KGILPPLIK 359
Score = 39 (18.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 701 ATWLIYMLNFLPDTGIFGAARVSLLKRFISAFKSANDIDDRALSLLALNSFAQDP 755
A W++ + + D A SL + AF++A D R ++ AL + P
Sbjct: 738 AVWMVERILRIEDIAREVAEEQSLSAALVDAFQNA-DFRTRQIAENALKHIDKIP 791
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 176 (67.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF CPI+ I DPV L++G T++R +IQ+WI+ GN +CPIT+ LS T N+ L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 221 KRLI-----ASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITE 268
+ LI S +E + HS S++++ ++++SQ++ + + E
Sbjct: 66 RSLILNFAHVSLKESSRPRTQQEHSHSQSQALI-----STLVSQSSSNASKLE 113
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 315 INGFVEILFNSV---DPRVLEATIFLLSELGSRDKSVIHTLTRVESDVE 360
++GFVE+L N + + + ++ ++F+L+ L ++ + R E VE
Sbjct: 296 VSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKR-EGVVE 343
Score = 37 (18.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 771 GLRELRKYSPLAFEMVKVLSNGH 793
G E+ K S +V VL NG+
Sbjct: 289 GREEMSKVSGFVEVLVNVLRNGN 311
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 167 (63.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGN-SSCPITRQKLSSTKLPKTNYV 219
P F+CPI+ I DPV + TG TY+R +I++W+ G +SCP+T+Q ++ T L N+
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTP-NHT 66
Query: 220 LKRLIASWQEQNPG-GLDL--SHSEPMSKS 246
L+RLI SW N G++ + P+ KS
Sbjct: 67 LRRLIQSWCTLNASYGIERIPTPKPPICKS 96
Score = 49 (22.3 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 732 FKSANDIDDRALSLL--------ALNSFAQDPQGLRDINIHMKDIMKGLRELRKYSPL 781
F S+ + D ALS+L AL S + +G + K + +G+ E R Y+ L
Sbjct: 178 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAAL 235
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 776 RKYSPLAFEMVKVLSNGHDSSADFWNHRELVHVDSSENGKVLSIACFR 823
R+ S +A ++ +L + A+F NH + V S + +V I R
Sbjct: 315 RRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSER 362
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 164 (62.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
PK+F CPI+ + DPV TGQTY+R +I +WIE G+S+CP + Q L+ +L N L
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVP-NRAL 356
Query: 221 KRLIASW 227
+ LI+ W
Sbjct: 357 RSLISQW 363
Score = 60 (26.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 44/203 (21%), Positives = 84/203 (41%)
Query: 251 NSPNSVISQATI--DGTITELKHAITSLCMSEILNESEMAVLQIERCWLEASMELDIQIM 308
N P +V A++ GT K A+ +L + E + +E C + A ++
Sbjct: 523 NEPGAVEELASMLTKGTSRGKKDAVMALF--NLSTHPESSARMLESCAVVALIQSLRNDT 580
Query: 309 LSKPAVINGFVEILFN--SVDPRVLEATIFLLSELGSRDKSVIHTLTRVESDVERIVALF 366
+S+ A G + +L S+ V + + S +G + T E+ V + +
Sbjct: 581 VSEEAA--GALALLMKQPSIVHLVGSSETVITSLVGLMRRG---TPKGKENAVSALYEIC 635
Query: 367 KKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKEEDFLKMCLKPKSVSVLLLGQMI 426
++G V + + P T+I+ + KKK +KMC + + S + LG +
Sbjct: 636 RRGGSALVQRVAKI-PGLNTVIQTITLNGTKRA-KKKASLIVKMCQRSQMPSAMALGSTL 693
Query: 427 GDSEESIVSSIANTIVSSKVFES 449
+ S+V + NT+ + F S
Sbjct: 694 TVVDRSLVGN--NTLRRAASFGS 714
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 173 (66.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 163 DFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKR 222
DF CP++ + DPV + +GQTYE+ I+ WI+ G CP TRQ L+ T L NY +K
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIP-NYTVKA 294
Query: 223 LIASWQEQNPGGLDLSHSEPMSKSIVPSNSP 253
LIA+W E N D+ +P + + SP
Sbjct: 295 LIANWCETN----DVKLPDPNKSTSLNELSP 321
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 92/379 (24%), Positives = 166/379 (43%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTK-LPKTN 217
T P F CPI+ + DPV + +G TY+R I++W E G +CP+T L+S + +P N
Sbjct: 32 TIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIP--N 89
Query: 218 YVLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSV---ISQATIDGTITELKHAIT 274
+ ++R+I W + GG + P + V S+ + + +S AT G +T
Sbjct: 90 HTIRRMIQGWCGSSLGG-GIERI-PTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 275 SLCMSEILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEAT 334
M+ + ESE + +C E L + + + F E N+ +LE T
Sbjct: 148 K--MTRLGKESE----RNRKCVKENGAGLVLCVCF------DAFSE---NANASLLLEET 192
Query: 335 IFLLS---ELGSRDKSVIHTLTRVESDVERIVALFKKGLLEAVVLI-DLLRPST---RTL 387
+ +L+ +G +S + T S R+V L + G A LI +LL + L
Sbjct: 193 VSVLTWMLPIGLEGQSKLTTT----SSFNRLVELLRNGDQNAAFLIKELLELNVTHVHAL 248
Query: 388 IEMD-MMESLMTVIKKKEE------DFLKMCL-KPKSVSVLLLGQMIGDSEESIVSSIAN 439
+++ + E+ M I + M L ++VS L ++ + E +V S N
Sbjct: 249 TKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDS-EN 307
Query: 440 TIVSSKVFESVISSL-EAEWAEERIAAVGILLRCMQEDGKCRNSIADKAELAPVMESFMA 498
++ + +V++ + E + E++ +++ + + K I++K +L VM
Sbjct: 308 SVCEKAL--TVLNVICETKEGREKVRRNKLVIPILVK--KILK-ISEKKDLVSVMWKVCK 362
Query: 499 ASDGERFEIVCFLSELVKL 517
+ DG E L KL
Sbjct: 363 SGDGSEVEEALRLGAFKKL 381
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 168 (64.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P++F CP++ + DPV L +GQTY++ IQ+W+ GN +CP T+Q L T L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTP-NLLI 133
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSE 280
+ +I+ W ++N GL+ +KS PN V T+ + E+ +++ S
Sbjct: 134 REMISKWCKKN--GLE-------TKS---QYHPNLVNEDETVTRSDREIFNSLLCKVSSS 181
Query: 281 ILNESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDP--RVLEATIFLL 338
L + + A ++ R E + P I V L + +P ++ E + L
Sbjct: 182 NLQDQKSAAKEL-RLLTRKGTEFRA-LFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTL 239
Query: 339 SELGSRDKS 347
+ D S
Sbjct: 240 LNISIHDDS 248
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 171 (65.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 139 CSPDHLIMAD-ADNPPGIGKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERG 197
C +H++ + + GI PP F CP++T + DPV + +GQT++R +I++W++ G
Sbjct: 219 CIREHMLKTEFLEVAKGIS--IPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNG 275
Query: 198 NSSCPITRQKLSSTKLPKTNYVLKRLIASWQEQN 231
+ CP TRQ L+ +L NY +K +IASW E N
Sbjct: 276 LAVCPRTRQVLTHQELIP-NYTVKAMIASWLEAN 308
Score = 48 (22.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 520 RTFNEQILHIIKDEGTYSSMHTL-LVY-LQTANHDQCPVVAGXXXXXXXXAEPRKMSIYR 577
+T+ E +H + D GT ++ HT+ LV L++ ++ A + ++ I R
Sbjct: 454 KTY-ECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGR 512
Query: 578 EEAIDTLISCLRNSDYPAAQLAAAKTIVSLQGRFTTSGKSLTRAMLLK 625
AI L+S L Y +L + +L S L +AM+++
Sbjct: 513 CGAITPLLSLL----YSEEKLTQEHAVTAL---LNLSISELNKAMIVE 553
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/67 (49%), Positives = 41/67 (61%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF CPIT + DPV + TGQTY+R +I WI+ G+++CP T Q L T L N L
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVP-NRAL 333
Query: 221 KRLIASW 227
K LI W
Sbjct: 334 KNLIVLW 340
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 160 (61.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGN-SSCPITRQKLSSTKLPKTNYV 219
P F+CPI+ I DPV + TG TY+R +I++W+ G +SCP+T+Q ++ L N+
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTP-NHT 71
Query: 220 LKRLIASW 227
L+RLI SW
Sbjct: 72 LRRLIQSW 79
Score = 49 (22.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 305 IQIMLSKPAVINGFVEILFNSVDPRVLEATIFLLSEL---G-SRDKSVIHTLTRV--ESD 358
+Q M KP V V+IL + + + +A + +L + G +R K+V + V E
Sbjct: 223 MQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELL 282
Query: 359 VERIVALFKKGLLEAVVLIDLL 380
++ ++G A+V++DLL
Sbjct: 283 MDESFTSERRGPEMAMVVLDLL 304
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 80/341 (23%), Positives = 147/341 (43%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L TK N
Sbjct: 11 TVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLK-TKDFVPNL 69
Query: 219 VLKRLIASWQE---QNPGGLDLSHSEPMSKSIVPSNSPNSVISQA--TIDGTITELKHAI 273
L+RLI W + + G D P S VP+ +V+ + +++ + ++
Sbjct: 70 TLQRLINIWSDSIGRRHNG-DSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVK 128
Query: 274 TSLCMSEILNESEMAVLQIERCWLEASMELDIQIM----LSKPAVINGFVEILFNSVDPR 329
S E L++ V + ++++ IM L V + L + D
Sbjct: 129 DSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGG 188
Query: 330 VLEATIFLLSELGSRDKSV--IHTLTRVESDVE-RIVALFKKGLL-EAVVLIDLLRPSTR 385
I L + G+ + + + L + D + +++ + G+L E + I + S
Sbjct: 189 DCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDP 248
Query: 386 TLIEMDMMESLMTVIKKKEEDFLKMCLKPKSVSVLLLGQMIGDSEESIVSSIANTIVSSK 445
+LIE + L+T+ K K ++ K ++ + ++ ++++A T S K
Sbjct: 249 SLIEASL-SFLITISKSKR-------VRSKLIAAKAITKIKDILLTETLTNVAVTEKSLK 300
Query: 446 VFESVISSLEAEWAEERIAAVGILLRCMQEDGKCRNSIADK 486
+ E++ S E G L C ++G+C + K
Sbjct: 301 LLETLSSKRE-----------GRLEICGDDNGRCVEGVVKK 330
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 91/348 (26%), Positives = 155/348 (44%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTK-LPKTN 217
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L + +P N
Sbjct: 9 TVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIP--N 66
Query: 218 YVLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLC 277
L+RLI W + + +E + + + I + I+ + + ++ +
Sbjct: 67 RTLQRLIEIWSDSVRRRTCVESAELAAPT---RDEIADAIDRVKIEKEERDDREVLSKIV 123
Query: 278 MSEILNESEMAVLQIERCWLEASMELDIQI-----MLSKPAVINGFVEILFNSVDPRVLE 332
++ L + +++ ++L Q+ +K V+ V+IL +++ +V +
Sbjct: 124 RFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKIL-STIRSKVSD 182
Query: 333 ATIFL-LSELGSRDK-SVIHTLTRVESDVERIVALFKKGLLEAVVLIDLLRPSTRTLIEM 390
F L RD+ SVI L + +VE + + GLLE + +D S + E
Sbjct: 183 RRRFSNLILTNGRDRLSVIVYLFKT-GNVE--LKIDCAGLLEFIA-VDA--ESKLLIAER 236
Query: 391 D-MMESLMTVIKKKEEDFL----KMCL----KPKSVSVLLLGQ-MIGDSEESIVSSIANT 440
D ++ LM I K + L CL PK V + LL + +IGD + + S ++
Sbjct: 237 DGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL 296
Query: 441 IVSSKVFESVISSLE--AEWAEERIAAVGILLRCMQEDGKCRNSIADK 486
VS V E + LE A E R G DG+C ++ K
Sbjct: 297 SVS--VTEKCLKLLEILASTKEGRSEICG-------GDGECLKTVVKK 335
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 75/299 (25%), Positives = 141/299 (47%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSS-TKLPKTN 217
T P +F CPI+ + DPV + TG TY+R +I+ WI GN +CP+T L++ ++P N
Sbjct: 30 TIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP--N 87
Query: 218 YVLKRLIASWQEQNPGGLDLSHSEPMSK-SIVPSN--SPNSVISQATIDGTITELKHAIT 274
+ ++++I W + G L P + ++P + +S AT G + I
Sbjct: 88 HTIRKMIQGWCVEK--GSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIE 145
Query: 275 SLCM----SE----ILNESEMAVLQIERCWLEASMELDIQIMLSKP-AVINGFVEILFNS 325
+ SE +NE+ + + + C+ + S + + ML++ +++ I
Sbjct: 146 KIKKLGDESEKNRKCVNENSVGWVLCD-CFDKFSGDEKLTFMLNEILSLLTWMFPIGLEG 204
Query: 326 VDPRVLEATIF--LLSELGSRDKSVIHTLTRVESDV----ERIVALF--KKGLLEAVVLI 377
+ ++ AT F + L S D SV + ++ E V F + G+ EA L+
Sbjct: 205 IS-KLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEA--LV 261
Query: 378 DLLRPSTRTLIEMDMMESLMTVIKKKEE---DFLKMCLKPKSVSVLLLGQMIGDSEESI 433
L+R S + + ++ ++ +K E +FL++ L VS+ + +MI D+E S+
Sbjct: 262 KLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGL----VSITV--EMIVDAENSV 314
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 159 (61.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKL-SSTKLPKTNYV 219
P F+CPI+ DPVTL TGQTYER I +W G+ +CP T Q+L T P N
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP--NKT 122
Query: 220 LKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMS 279
L LI +W Q + + ++I + QA + ++ELK + + M+
Sbjct: 123 LHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHA-LSELKQIVIAHLMA 181
Query: 280 E--ILNESEMAVL 290
++ E ++V+
Sbjct: 182 RKTVVEEGGVSVI 194
Score = 47 (21.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 307 IMLSKPAVINGFVEILFNSVDPRVLEATIFLLSEL 341
+M+S AV V+IL S+DP LE +F+L L
Sbjct: 310 LMVSIGAVPQ-LVDIL-PSLDPECLELALFVLDAL 342
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 152 (58.6 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L + + N
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVP-NL 68
Query: 219 VLKRLIASWQE 229
L RLI W +
Sbjct: 69 TLHRLIDHWSD 79
Score = 49 (22.3 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 775 LRKYSPLAFEMVKVLSNGHDSSADFWNHRELVHVDSSENGKVLSIACFRDKI 826
+ K L E++K++S+ DSS N L+ + SS+ K +A R+K+
Sbjct: 226 IAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVK---LALIREKL 274
Score = 44 (20.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 14/67 (20%), Positives = 37/67 (55%)
Query: 300 SMELDIQIMLSK-PAVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESD 358
+++ + +++++K ++ ++++ + D ++EA + LL + S K V L R E
Sbjct: 217 AVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIAS-SKRVKLALIR-EKL 274
Query: 359 VERIVAL 365
V ++ +L
Sbjct: 275 VTKLTSL 281
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 155 (59.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 162 KDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLK 221
+D +CPI+ I DPV +ETG TY+R +I +W GN +CPIT + L+ST+L N ++
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVD-NVSVR 348
Query: 222 RLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSEI 281
++I + N G+ L+ KS P S+ ++ G + I SE+
Sbjct: 349 QVIRKHCKTN--GIVLAGISRRRKSH-DDVVPESLAAKGA--GKL------IAKFLTSEL 397
Query: 282 LNESEMAVLQ-IERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLE 332
+N E + + + ++ + L K + +++L +SVD R+ E
Sbjct: 398 INGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLL-SSVDIRIQE 448
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P F+CPI+ DPVTL TGQTYER I +W G+ +CP T Q+L L N L
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDD-LVTPNKTL 119
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSE 280
+LI +W Q + + ++I + +A + ++ELK + + +++
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHA-LSELKQVVMAHAIAK 178
Query: 281 --ILNESEMAVL 290
+++E + V+
Sbjct: 179 KTVVDEGGVFVI 190
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 156 (60.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 163 DFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKR 222
D CPI+ I DPV LE+G TY+R +I +W GN +CP T + L ST L N+ +K+
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVD-NFSVKQ 339
Query: 223 LIASWQEQN 231
+I S+ +QN
Sbjct: 340 VIQSYSKQN 348
Score = 43 (20.2 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 355 VESDVERIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKE 404
++ D E +V K L+E +L L+E ++ESLM +++ +
Sbjct: 384 IKGDEEEMV----KALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDD 429
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 121 (47.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 787 KVLSNGHDSSADFWNHRE--LVHVDSSENGKVLSIACFRDK--IFSGHSDGTIKVWTGRG 842
KVL+ G D + ++ RE +V KV S+ + +FS SD TI+VW+ G
Sbjct: 237 KVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTG 296
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 297 G--NCVQVVRAHESAVTGLSLHATGDYLLSSSEDQ 329
Score = 70 (29.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
VC I+ + + P V+ + Q +ERR I+++I N + PI Q LS +L
Sbjct: 4 VCAISNEVPEHPCVSPVSNQVFERRLIEKYIAE-NGADPINGQPLSEEQL 52
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP+ F+CPIT I +DP G TYE AI W ERG+ + P+ ++L T L N
Sbjct: 353 PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVP-NLA 411
Query: 220 LKRLIASW 227
L+ I W
Sbjct: 412 LRSAIQEW 419
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 140 (54.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
PK+F+C ++ I +PV + +GQTYE+R I EW++ +CP T+Q LS +L N+++
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSH-RLWIPNHLI 130
Query: 221 KRLIASW 227
LI W
Sbjct: 131 SDLITQW 137
Score = 46 (21.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 21/101 (20%), Positives = 40/101 (39%)
Query: 527 LHIIKDEGTYSSMHTLLVYLQTAN----HDQCPVVAGXXXXXXXXAEPRKMSIYREEAID 582
L I++ T + + L++ L T + D+ A + K+ I EA+
Sbjct: 237 LSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVK 296
Query: 583 TLISCLRNSDYPAAQLAAAKTIVSLQGRFTTSGKSLTRAML 623
LI + D A + A T+ +L GK ++ ++
Sbjct: 297 ALIDLIEEGDLLATK-EATSTVFNLCIVLENKGKVVSAGLI 336
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 142 (55.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P + CPI I +DP G TYER+AI+EWI++ P+T+ +L + L N+ L
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTP-NHTL 767
Query: 221 KRLIASWQEQNPGGLDLS 238
+ I W+ ++ LDLS
Sbjct: 768 RSAIREWRSRSR--LDLS 783
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 141 (54.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P + CPI I ++P G TYER+AI W+E+ N S P+TRQKL KL N+ L
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTP-NHTL 783
Query: 221 KRLIASWQEQ 230
+ I W+ +
Sbjct: 784 RSAIRDWKSR 793
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP F+CPI+ + +P G TYE +++EW++ G+ + P+T KL+ L N+
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVP-NHA 555
Query: 220 LKRLIASWQEQN 231
L+ I W ++N
Sbjct: 556 LRSAIQEWLQRN 567
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT I DPV G +YER AI+ WI N + P+T L +T L N L
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTP-NRTL 476
Query: 221 KRLIASW 227
K I W
Sbjct: 477 KMAIFRW 483
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 778 YSPLAFEMVKVLSNGHDSSADFWNHR--ELVHVDSSENGKVLSIACFRDKIFSGHSDGTI 835
YS LA ++L+ ++++ WN E+++ G V ++A K +SG D TI
Sbjct: 593 YS-LAVSNRRLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSDKKFYSGSYDSTI 651
Query: 836 KVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARV 881
KVW L +Q + HT +V + ++ SG ++SGS D + +V
Sbjct: 652 KVWNDS---LVCVQTLNRHTSSVESI-VVSSG-CVFSGSADNSIKV 692
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP VCP+ IF+ P + G T+ I + NS+ P + ++S+ TN +
Sbjct: 81 PPTTLVCPLHNGIFNQPFIAKCGHTFCFSCIFK--PHANSTSP-NQSPINSSNSTSTNEL 137
Query: 220 LKRL--IASWQEQNPGGLDLSHSEPMSKSIVPSNSPNS 255
LK L I+ + + ++S S S + +N N+
Sbjct: 138 LKCLNNISISHQSGNNNNNNNNSNNNSNSNIANNQNNT 175
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 146 MAD-ADNPPGIGKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPIT 204
+AD A N PP F CP+ + +P G TY+RRAI+EW+E +S P+T
Sbjct: 734 VADKARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHRTS-PVT 792
Query: 205 RQKLSSTKLPKTNYVLKRLIASWQEQN 231
L + L N+ L I W+ +N
Sbjct: 793 NSPLQNVNL-LPNHTLYAAIVEWRNRN 818
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P+ F+CPI+ + DP G TYE AI W++ G+ + P+T KL TKL N L
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVP-NLAL 384
Query: 221 KRLIASW 227
+ I W
Sbjct: 385 RSAIQEW 391
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DPV G +YER A++ WI + + P+T L S L N L
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTP-NRTL 461
Query: 221 KRLIASWQE 229
K I W E
Sbjct: 462 KMAINRWLE 470
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DPV G +YE+ A++ WI S P+T L S L N L
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTP-NRTL 463
Query: 221 KRLIASWQE 229
K I+ W E
Sbjct: 464 KMAISRWLE 472
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DP+ G +YE+ A++ WI R + P+T LSS L N L
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTP-NRTL 462
Query: 221 KRLIASW 227
K I W
Sbjct: 463 KMAIDRW 469
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DPV G +YER A++ WI + + P+T L S L N L
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTP-NRTL 463
Query: 221 KRLIASWQE 229
K I W E
Sbjct: 464 KMAINRWLE 472
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DP+ G +YE+ A++ WI R + P+T LSS L N L
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTP-NRTL 463
Query: 221 KRLIASW 227
K I W
Sbjct: 464 KMAIDRW 470
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP+ F+CPI+ I +P G TYE + W+ G P+T +L + L N V
Sbjct: 294 PPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIP-NLV 352
Query: 220 LKRLIASWQEQNP 232
L+ I W +Q+P
Sbjct: 353 LRSAIKDWLQQHP 365
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 158 HTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTN 217
H P F CPIT + ++P G TYE+RAI+EW+++ + S P+T S L N
Sbjct: 723 HNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSL-LPN 780
Query: 218 YVLKRLIASWQEQ 230
+ L I W+ Q
Sbjct: 781 HSLLSAIKEWRSQ 793
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 134 (52.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP F+CP+ + ++P G TY+R AI+EW++ N+S P+T L S L NY
Sbjct: 766 PPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNL-LPNYT 823
Query: 220 LKRLIASWQ 228
L I W+
Sbjct: 824 LYTAIMEWR 832
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
PK+F C ++ I DPV + +GQTYE+R I EW+ + +CP +Q L L N+++
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTP-NHLI 132
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSE 280
LI W N + P K PS+ +++ DG I L I+S S
Sbjct: 133 NELITRWCLAN------KYDRPAPK---PSDI--DYVTELFTDG-IESLLQRISSPS-SS 179
Query: 281 ILNESEMA---VLQIER 294
+ +++E A LQ E+
Sbjct: 180 VADQTEAAKELALQTEK 196
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 130 (50.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DPV G +YE+ A++ WI + + P+T L S L N L
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTP-NRTL 463
Query: 221 KRLIASWQE 229
K I W E
Sbjct: 464 KMAINRWLE 472
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 129 (50.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT + DPV G +YE+ A++ WI + + P+T L S L N L
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTP-NRTL 463
Query: 221 KRLIASWQE 229
K I+ W E
Sbjct: 464 KMAISRWLE 472
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 162 KDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLK 221
+DF CPI+ I DP G TYE ++W+ G + P T + L + L N+ L+
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVP-NHTLR 293
Query: 222 RLIASWQEQNP 232
+I W E+NP
Sbjct: 294 IIIKDWLEKNP 304
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 30/78 (38%), Positives = 40/78 (51%)
Query: 156 GKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPK 215
G + P F+CPI+ I DP G TYE AI+ W +RG S P+T L + L
Sbjct: 431 GDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVP 490
Query: 216 TNYVLKRLIASW-QEQNP 232
N VL+ I + Q+Q P
Sbjct: 491 -NRVLRSFIHGYLQQQQP 507
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 138 (53.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP ++CPI + DP+ G TYE AI+EW+ G+ + P+T K+ L N+
Sbjct: 735 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIP-NHA 793
Query: 220 LKRLIASWQEQ 230
L I WQ Q
Sbjct: 794 LHLAIQDWQNQ 804
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 21 SQASELKELERNYEELLDENCRVFASYFKQ 50
SQ +L++LE+ + E D + S F+Q
Sbjct: 382 SQMRKLQDLEKEHGEKFDTAMELLKS-FRQ 410
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 103 (41.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ +D +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 A--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 157 KHTPPKDFVC-PITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPK 215
K T D++C IT IF DPV +G TYER AI E +++ PITR+K+ L
Sbjct: 196 KPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVP 255
Query: 216 TNYVLKRLIASWQEQN 231
N +K +A++ E++
Sbjct: 256 -NLAIKEAVAAYLEKH 270
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 154 GIGKHT-PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTK 212
G +H P F+CPI + DP G TYE AI+ W++ + + P+T KLS T
Sbjct: 756 GRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTS 815
Query: 213 LPKTNYVLKRLIASWQEQN 231
L N+ L+ I W + +
Sbjct: 816 LI-ANHALRSAIQEWLQHH 833
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 95 (38.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/60 (33%), Positives = 39/60 (65%)
Query: 165 VCPITTHIFDDPV-TLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLP--KTNYVLK 221
+C I+ + D+PV + ++G +ERR ++ +IE + CP+T+++L+ + KTN V+K
Sbjct: 2 ICAISGEVPDEPVVSKKSGLLFERRLVERYIE-DHGKCPVTKEELTMDDIVAVKTNKVVK 60
Score = 77 (32.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 22/97 (22%), Positives = 51/97 (52%)
Query: 788 VLSNGHDSSADFWNHR--ELVHVDSSENGKVLSIACF-RDKIF-SGHSDGTIKVWTG--R 841
+ + G D++A ++ +++ + + K+ S+ RD++F +G +D T+K+W G
Sbjct: 236 IATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEE 295
Query: 842 GSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKT 878
G+ + I +++HT V + + + + + S D T
Sbjct: 296 GNY-NCIHTLKDHTAEVEAVTVHATQKYFVTASKDNT 331
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 119 (46.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 148 DADNPPG-IGKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQ 206
++ NP I PK+F+C ++ I +P+ + +GQT+E+ I EW++ +CP T+Q
Sbjct: 52 ESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQ 110
Query: 207 KLSST-KLPKTNYVLKRLIASW 227
L +P N+++ +I W
Sbjct: 111 VLYHRFMIP--NHLINEVIKEW 130
Score = 49 (22.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 481 NSIADKAELAPVMESFMAASDGERFEIVCFLSELVKLNRRTFNEQILHI----IKDEGTY 536
NS KA L V+E + + E F + L + +++ + +E ++ IK
Sbjct: 280 NSEVLKA-LIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNV 338
Query: 537 SSMHTLLVYLQTANH 551
S + +LL ++ T NH
Sbjct: 339 SMLLSLLAFVSTQNH 353
>GENEDB_PFALCIPARUM|MAL7P1.81 [details] [associations]
symbol:MAL7P1.81 "eukaryotictranslation
initiation factor 3 37.28 kDa subunit, putative" species:5833
"Plasmodium falciparum" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006446 GO:GO:0003743
EMBL:AL844506 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
OMA:ATVAGWS RefSeq:XP_001349071.1 ProteinModelPortal:Q8IBT2
IntAct:Q8IBT2 MINT:MINT-1587139 EnsemblProtists:MAL7P1.81:mRNA
GeneID:2655045 KEGG:pfa:MAL7P1.81 EuPathDB:PlasmoDB:PF3D7_0716800
ProtClustDB:CLSZ2432323 Uniprot:Q8IBT2
Length = 327
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 821 CFRDK-IFSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTA 879
CF DK I S H +G I VW HLI++ + H+K VT L+ + ++ S SLD TA
Sbjct: 151 CFFDKLILSAHENGEIVVWNAEDG--HLIRKFQAHSKEVTNLSFDKDRMLMLSSSLDGTA 208
Query: 880 RVRSNDSF 887
++R +F
Sbjct: 209 KLRDGVNF 216
>UNIPROTKB|Q8IBT2 [details] [associations]
symbol:MAL7P1.81 "Eukaryotic translation initiation factor
3 37.28 kDa subunit, putative" species:36329 "Plasmodium falciparum
3D7" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006446 GO:GO:0003743 EMBL:AL844506
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 OMA:ATVAGWS
RefSeq:XP_001349071.1 ProteinModelPortal:Q8IBT2 IntAct:Q8IBT2
MINT:MINT-1587139 EnsemblProtists:MAL7P1.81:mRNA GeneID:2655045
KEGG:pfa:MAL7P1.81 EuPathDB:PlasmoDB:PF3D7_0716800
ProtClustDB:CLSZ2432323 Uniprot:Q8IBT2
Length = 327
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 821 CFRDK-IFSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTA 879
CF DK I S H +G I VW HLI++ + H+K VT L+ + ++ S SLD TA
Sbjct: 151 CFFDKLILSAHENGEIVVWNAEDG--HLIRKFQAHSKEVTNLSFDKDRMLMLSSSLDGTA 208
Query: 880 RVRSNDSF 887
++R +F
Sbjct: 209 KLRDGVNF 216
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 A--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 A--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 T--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 T--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 99 (39.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 236 KILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 295
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 296 T--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 328
Score = 70 (29.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 52
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ KV S+ ++ +FS D TI++W+
Sbjct: 245 KILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPN 304
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H AVTGL++ +G+ L S S D+
Sbjct: 305 A--SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQ 337
Score = 70 (29.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + PI Q LS +L
Sbjct: 13 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPINNQPLSEEQL 61
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 99 (39.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 787 KVLSNGHDSSADFWNH--RELVHVDSSENGKVLSIACF--RDKIFSGHSDGTIKVWTGRG 842
K+L+ G D + ++ +++ + KV S+ +D +FS D TI++W+
Sbjct: 237 KILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPN 296
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
+ +Q +R H +VTGL++ +G+ L S S D+
Sbjct: 297 A--SCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQ 329
Score = 69 (29.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 165 VCPITTHIFDDP-VTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+C I+ + + P V+ + YERR I+++I N + P+ Q LS +L
Sbjct: 4 ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAE-NGTDPVNNQPLSEEQL 52
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 788 VLSNGHDSSADFWNHRELVHVDSSENG-KVLSIAC--FRDKIFSGHSDGTIKVWTGRGSI 844
V + D + W+ R+ V + +N +VL++ D+I SG D IKVW R +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN- 226
Query: 845 LHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARV 881
L +R H +VTGL++ G L S ++D T RV
Sbjct: 227 -KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 897 855 0.00083 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 73
No. of states in DFA: 627 (67 KB)
Total size of DFA: 392 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.51u 0.16s 74.67t Elapsed: 00:00:03
Total cpu time: 74.52u 0.16s 74.68t Elapsed: 00:00:03
Start: Mon May 20 15:48:56 2013 End: Mon May 20 15:48:59 2013