Query 002642
Match_columns 897
No_of_seqs 514 out of 3536
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 16:07:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002642.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1361-1364//hhsearch_pdb/002642hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 411.4 23.3 253 619-886 21-277 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 406.0 20.6 250 620-885 30-284 (311)
3 4g3f_A NF-kappa-beta-inducing 1.0 1 1 404.5 20.5 253 621-895 57-319 (336)
4 3omv_A RAF proto-oncogene seri 1.0 1 1 404.0 28.6 266 615-894 29-302 (307)
5 4fie_A Serine/threonine-protei 1.0 1 1 401.9 26.7 248 621-886 150-401 (423)
6 4aoj_A High affinity nerve gro 1.0 1 1 401.6 29.5 262 615-893 34-320 (329)
7 4asz_A BDNF/NT-3 growth factor 1.0 1 1 401.5 26.3 262 616-894 7-291 (299)
8 4ase_A Vascular endothelial gr 1.0 1 1 401.5 23.4 266 615-894 57-349 (353)
9 4fih_A Serine/threonine-protei 1.0 1 1 401.1 24.2 248 621-886 73-324 (346)
10 4gt4_A Tyrosine-protein kinase 1.0 1 1 397.6 24.9 260 615-890 19-304 (308)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=411.40 Aligned_cols=253 Identities=22% Similarity=0.442 Sum_probs=222.7
Q ss_pred CCCCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
Q ss_conf 34889159999522695499985655--9407999854786567872478999999999999961799963268322104
Q 002642 619 IKTSDLEYIKELGSGTFGTVFYGKWK--GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVVTD 696 (897)
Q Consensus 619 i~~~~Yeiik~LG~G~fG~VYla~~k--g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~~e 696 (897)
.+.++|+++++||+|+||+||+++++ ++.||||++..... .....+.+.+|+.+++.++|||||++++++.+
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~ 94 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM------SSKEREESRREVAVLANMKHPNIVQYRESFEE 94 (350)
T ss_dssp SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC------CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 851255884797027793999999889998999999865878------97999999999999987799898919999998
Q ss_pred CCCCEEEEEEEEEECCCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCEEEEEE
Q ss_conf 8975079999542236267887202-666338899999999999999999899631268999758513799999099982
Q 002642 697 GPVTNLATVTEYMVNGSLKQVLRRK-DRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRPVCKIGD 775 (897)
Q Consensus 697 ~~~~~l~IVmEyl~GGSL~~~L~~~-~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g~VKLiD 775 (897)
. ..+||||||++||+|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 95 ~--~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~D 168 (350)
T 4b9d_A 95 N--GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT----KDGTVQLGD 168 (350)
T ss_dssp T--TEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC----TTCCEEECS
T ss_pred C--CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEC----CCCCEEECC
T ss_conf 9--9999999488998399999973899997899999999999999999989915135978997987----899989764
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 5995023344-335886468864573111358887892346999999999999099999999959999999924789999
Q 002642 776 LGLSKIKQKT-LISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNLGPKI 854 (897)
Q Consensus 776 FGLAk~~~~~-~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~~~~~ 854 (897)
||+|+..... ......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||...+..+.+.+++...+ +..
T Consensus 169 FGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~--y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~~ 245 (350)
T 4b9d_A 169 FGIARVLNSTVELARACIGTPYYLSPEICENKP--YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPV 245 (350)
T ss_dssp TTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC--CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCC
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CCC
T ss_conf 652144068854101457883603999987999--89599999999999999978799899699999999980899-999
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 99882999999999300399999789999999
Q 002642 855 PSWCEPTWRSLMERCWSSDPKSRPAFSEITKE 886 (897)
Q Consensus 855 p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~ 886 (897)
+..++.++.+||.+||++||.+|||+++++++
T Consensus 246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 75579999999999855896679089999639
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=406.05 Aligned_cols=250 Identities=26% Similarity=0.424 Sum_probs=220.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
Q ss_conf 4889159999522695499985655--94079998547865678724789999999999999617999632683221048
Q 002642 620 KTSDLEYIKELGSGTFGTVFYGKWK--GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVVTDG 697 (897)
Q Consensus 620 ~~~~Yeiik~LG~G~fG~VYla~~k--g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~~e~ 697 (897)
..++|++++.||+|+||+||+++++ ++.||+|++.+... ......+.+.+|+++++.++||||+++++++.+.
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 85236898898316484999999999998999999888887-----7978999999999999867998989199999738
Q ss_pred CCCEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCEEEEEECC
Q ss_conf 97507999954223626788720266633889999999999999999989963126899975851379999909998259
Q 002642 698 PVTNLATVTEYMVNGSLKQVLRRKDRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRPVCKIGDLG 777 (897)
Q Consensus 698 ~~~~l~IVmEyl~GGSL~~~L~~~~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g~VKLiDFG 777 (897)
..+|+||||++||+|.+++++. ..+++..+..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 105 --~~~yivmEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~----~~g~vKl~DFG 177 (311)
T 4aw0_A 105 --EKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN----EDMHIQITDFG 177 (311)
T ss_dssp --SEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----TTSCEEECCCT
T ss_pred --CEEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEEECC
T ss_conf --9899999648998999999874-9999999999999999999999988782687878996985----89888998768
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 9502334---4335886468864573111358887892346999999999999099999999959999999924789999
Q 002642 778 LSKIKQK---TLISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNLGPKI 854 (897)
Q Consensus 778 LAk~~~~---~~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~~~~~ 854 (897)
+|+.... .......+||+.|+|||++.+.. |+.++||||+||++|+|++|+.||...+..+.+.++....+ .+
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~--~~ 253 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY--DF 253 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC--BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CC
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC--CC
T ss_conf 750257787765436755680307998976899--99689899899999999749899899799999999971999--99
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 9988299999999930039999978999999
Q 002642 855 PSWCEPTWRSLMERCWSSDPKSRPAFSEITK 885 (897)
Q Consensus 855 p~~is~eL~dLI~kcL~~DP~eRPSaeELL~ 885 (897)
|..+++++++||.+||++||.+|||++|++.
T Consensus 254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHCC
T ss_conf 9656999999999976289757809679758
No 3
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=404.49 Aligned_cols=253 Identities=24% Similarity=0.375 Sum_probs=220.4
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 889159999522695499985655--940799985478656787247899999999999996179996326832210489
Q 002642 621 TSDLEYIKELGSGTFGTVFYGKWK--GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVVTDGP 698 (897)
Q Consensus 621 ~~~Yeiik~LG~G~fG~VYla~~k--g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~~e~~ 698 (897)
...|++.++||+|+||+||+++++ +..||||+++.... ..+|+.+++.++|||||++++++.++
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~~- 122 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVREG- 122 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEET-
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH-------------HHHHHHHHHHCCCCCCCCEEEEEEEC-
T ss_conf 3351768685138780999999889998999999788886-------------99999999857998999399999989-
Q ss_pred CCEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCC-EEEEEECC
Q ss_conf 75079999542236267887202666338899999999999999999899631268999758513799999-09998259
Q 002642 699 VTNLATVTEYMVNGSLKQVLRRKDRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRP-VCKIGDLG 777 (897)
Q Consensus 699 ~~~l~IVmEyl~GGSL~~~L~~~~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g-~VKLiDFG 777 (897)
..+||||||++||+|.+++++. ..+++..+..|+.|++.||.|||+++|+||||||+|||++ .++ .+||+|||
T Consensus 123 -~~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~~vKl~DFG 196 (336)
T 4g3f_A 123 -PWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS----SDGSRAALCDFG 196 (336)
T ss_dssp -TEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC----TTSCCEEECCCT
T ss_pred -CEEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEE----CCCCEEEEEECC
T ss_conf -9999999665998699999876-9999999999999999999999988904261677887995----899979996278
Q ss_pred CCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 950233443------35886468864573111358887892346999999999999099999999959999999924789
Q 002642 778 LSKIKQKTL------ISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNLG 851 (897)
Q Consensus 778 LAk~~~~~~------~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~~ 851 (897)
+|+...... .....+||+.|+|||++.+.. |+.++|||||||++|||++|+.||......+....+.....+
T Consensus 197 la~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~ 274 (336)
T 4g3f_A 197 HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP--CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP 274 (336)
T ss_dssp TCEEC------------CCCCCCGGGCCHHHHTTCC--CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG
T ss_pred CCEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 776856787654022178545580200899988999--890899999999999999786998998999999999808998
Q ss_pred -CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf -99999882999999999300399999789999999999999729
Q 002642 852 -PKIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAMAAAMN 895 (897)
Q Consensus 852 -~~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l~~alg 895 (897)
..++..+++.+.+||.+||++||.+|||+.|++++|...+++.+
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred CHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 002586679999999999762897689599999999999975443
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=403.99 Aligned_cols=266 Identities=33% Similarity=0.581 Sum_probs=225.9
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 33323488915999952269549998565594079998547865678724789999999999999617999632683221
Q 002642 615 ELQTIKTSDLEYIKELGSGTFGTVFYGKWKGSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVV 694 (897)
Q Consensus 615 ~~~~i~~~~Yeiik~LG~G~fG~VYla~~kg~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~ 694 (897)
..|++..+++++.++||+|+||+||++++++ .||||+++... ......+.|.+|+.++++++|||||++++++
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~------~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~ 101 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVD------PTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSS------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred CCCEECHHHEEEEEEEEECCCCEEEEEEECC-CEEEEEEEECC------CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 6708747994984498208886899999899-68999997268------9999999999999999858998874699999
Q ss_pred ECCCCCEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCEEEEE
Q ss_conf 04897507999954223626788720266633889999999999999999989963126899975851379999909998
Q 002642 695 TDGPVTNLATVTEYMVNGSLKQVLRRKDRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRPVCKIG 774 (897)
Q Consensus 695 ~e~~~~~l~IVmEyl~GGSL~~~L~~~~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g~VKLi 774 (897)
.++ .+++||||+++|+|.+++......+++..+..|+.|++.||.|||+++|+||||||+|||++ .++.+||+
T Consensus 102 ~~~---~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~----~~~~~Ki~ 174 (307)
T 3omv_A 102 TKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH----EGLTVKIG 174 (307)
T ss_dssp CSS---SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE----TTEEEEEC
T ss_pred ECC---EEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEE
T ss_conf 789---58999974899878898752489999999999999999999999779952785578997888----99908994
Q ss_pred ECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 25995023344---335886468864573111358-88789234699999999999909999999995999999992478
Q 002642 775 DLGLSKIKQKT---LISGGVRGTIPWMAPELFKSK-DNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNL 850 (897)
Q Consensus 775 DFGLAk~~~~~---~~~~~~~GT~~Y~APEvl~g~-~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~ 850 (897)
|||+|+..... .......||+.|+|||++.+. ...|+.++||||||++||||++|+.||........+..++....
T Consensus 175 DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~ 254 (307)
T 3omv_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 254 (307)
T ss_dssp CCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTC
T ss_pred ECCCCEECCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 41575424667764031564468772498786146899878687757289999999978899899996999999996588
Q ss_pred -CC---CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf -99---999988299999999930039999978999999999999972
Q 002642 851 -GP---KIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAMAAAM 894 (897)
Q Consensus 851 -~~---~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l~~al 894 (897)
.+ ..+..+|..+.+||.+||+.||.+|||+.++++.|+.+...+
T Consensus 255 ~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 255 ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCC
T ss_conf 888720035445699999999975779768909899999999974507
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=401.92 Aligned_cols=248 Identities=24% Similarity=0.399 Sum_probs=216.3
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 889159999522695499985655--940799985478656787247899999999999996179996326832210489
Q 002642 621 TSDLEYIKELGSGTFGTVFYGKWK--GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVVTDGP 698 (897)
Q Consensus 621 ~~~Yeiik~LG~G~fG~VYla~~k--g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~~e~~ 698 (897)
...|+++++||+|+||.||+++++ ++.||||++....... .+.+.+|+.+|+.++|||||++++++.+.
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~~- 220 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVG- 220 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--------GGGHHHHHHHHHHCCCTTBCCEEEEEEET-
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEEC-
T ss_conf 684386169624818489999999999899999986255468--------99999999999857998987168999989-
Q ss_pred CCEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCEEEEEECCC
Q ss_conf 75079999542236267887202666338899999999999999999899631268999758513799999099982599
Q 002642 699 VTNLATVTEYMVNGSLKQVLRRKDRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRPVCKIGDLGL 778 (897)
Q Consensus 699 ~~~l~IVmEyl~GGSL~~~L~~~~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g~VKLiDFGL 778 (897)
..+||||||++||+|.++++. ..+++..+..|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 221 -~~~~iVmEy~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~----~~g~vKl~DFGl 293 (423)
T 4fie_A 221 -DELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 293 (423)
T ss_dssp -TEEEEEEECCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC----TTCCEEECCCTT
T ss_pred -CEEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf -999999969899828988761--6989999999999999999999988904465787778985----899989803726
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC
Q ss_conf 502334-433588646886457311135888789234699999999999909999999995999999992478-999999
Q 002642 779 SKIKQK-TLISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNL-GPKIPS 856 (897)
Q Consensus 779 Ak~~~~-~~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~-~~~~p~ 856 (897)
|+.... .......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+....+.+..+..... ....+.
T Consensus 294 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~ 371 (423)
T 4fie_A 294 CAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 371 (423)
T ss_dssp CEECCSSCCCBCCCEECTTTCCHHHHTTCC--BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTT
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 547778876434666474727999977999--996899999999999999787998986999999999727998876501
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 882999999999300399999789999999
Q 002642 857 WCEPTWRSLMERCWSSDPKSRPAFSEITKE 886 (897)
Q Consensus 857 ~is~eL~dLI~kcL~~DP~eRPSaeELL~~ 886 (897)
.++.++++||.+||..||.+|||++|++++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 299999999999867895689099999609
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=401.60 Aligned_cols=262 Identities=36% Similarity=0.619 Sum_probs=228.0
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEEC-------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 333234889159999522695499985655-------9407999854786567872478999999999999961799963
Q 002642 615 ELQTIKTSDLEYIKELGSGTFGTVFYGKWK-------GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNV 687 (897)
Q Consensus 615 ~~~~i~~~~Yeiik~LG~G~fG~VYla~~k-------g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNI 687 (897)
..+.+...+|.+.++||+|+||+||++++. +..||||+++.. .....++|.+|+.+|++++||||
T Consensus 34 ~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnI 105 (329)
T 4aoj_A 34 CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTMLQHQHI 105 (329)
T ss_dssp CSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--------SHHHHHHHHHHHHHHTTCCCTTB
T ss_pred HHCCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCC--------CHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 5330678992887797147784899899878665778969999997757--------97999999999999985899899
Q ss_pred EEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECC
Q ss_conf 26832210489750799995422362678872026--------------6633889999999999999999989963126
Q 002642 688 VAFYGVVTDGPVTNLATVTEYMVNGSLKQVLRRKD--------------RTIDRRKRIIIAMDAAFGIEYLHEKNIVHFD 753 (897)
Q Consensus 688 VkL~d~~~e~~~~~l~IVmEyl~GGSL~~~L~~~~--------------~~lse~~il~Ia~QIl~aL~yLHs~GIIHRD 753 (897)
|++++++.+. ..+++||||+++|+|.++++... .++++..++.|+.|++.||.|||+++|+|||
T Consensus 106 V~l~g~~~~~--~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD 183 (329)
T 4aoj_A 106 VRFFGVCTEG--RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183 (329)
T ss_dssp CCEEEEECSS--SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCEEEEEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 9698999989--98999998279993999998607541001221124578899999999999999999998408842266
Q ss_pred CCCCCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-C
Q ss_conf 89997585137999990999825995023344---3358864688645731113588878923469999999999990-9
Q 002642 754 LKSHNFLVNMRDPQRPVCKIGDLGLSKIKQKT---LISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLT-G 829 (897)
Q Consensus 754 IKPeNILLd~~d~~~g~VKLiDFGLAk~~~~~---~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLt-G 829 (897)
|||+|||++ .++.+||+|||+++..... .......||+.|+|||++.+.. ++.++||||||+++|||++ |
T Consensus 184 LKp~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~--~~~~sDvwS~Gvvl~Ellt~G 257 (329)
T 4aoj_A 184 LATRNCLVG----QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYG 257 (329)
T ss_dssp CCGGGEEEE----TTTEEEECCCC----------------CCCCGGGCCHHHHTTCC--CCHHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHEEEC----CCCCEEECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCC--CCCCCCCCCHHHHHHHHHCCC
T ss_conf 667648988----99968976660333656787530047645565665826544799--996630010578999998289
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999959999999924789999998829999999993003999997899999999999997
Q 002642 830 EEPYADLHSEEIIAGIIKGNLGPKIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAMAAA 893 (897)
Q Consensus 830 k~PF~~~~~~e~l~~ii~~~~~~~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l~~a 893 (897)
+.||......+.+..+..+. .+..|..+|+++.+||.+||+.||++|||+++++++|+.+.+.
T Consensus 258 ~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 258 KQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 99999989999999998089-8998644639999999997475965792999999999987458
No 7
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=401.50 Aligned_cols=262 Identities=35% Similarity=0.612 Sum_probs=228.1
Q ss_pred CCCCCCCCCEEEEEECCCCCEEEEEEEEC-------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 33234889159999522695499985655-------94079998547865678724789999999999999617999632
Q 002642 616 LQTIKTSDLEYIKELGSGTFGTVFYGKWK-------GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVV 688 (897)
Q Consensus 616 ~~~i~~~~Yeiik~LG~G~fG~VYla~~k-------g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIV 688 (897)
.+.+..++|.+.++||+|+||+||++++. +..||||+++.. .....++|.+|+.+|++++|||||
T Consensus 7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV 78 (299)
T 4asz_A 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--------SDNARKDFHREAELLTNLQHEHIV 78 (299)
T ss_dssp CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--------CHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred HCCCCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCC--------CHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 441488892982498207882999999877666778879999996777--------858999999999999858998886
Q ss_pred EEEEEEECCCCCEEEEEEEEEECCCHHHHHHHCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
Q ss_conf 6832210489750799995422362678872026------------6633889999999999999999989963126899
Q 002642 689 AFYGVVTDGPVTNLATVTEYMVNGSLKQVLRRKD------------RTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKS 756 (897)
Q Consensus 689 kL~d~~~e~~~~~l~IVmEyl~GGSL~~~L~~~~------------~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKP 756 (897)
++++++.+. ..+++||||+++|+|.++++..+ ..+++..++.|+.|++.||.|||+++|+||||||
T Consensus 79 ~l~g~~~~~--~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp 156 (299)
T 4asz_A 79 KFYGVCVEG--DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156 (299)
T ss_dssp CEEEEECSS--SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CEEEEEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 287999569--989999985899968999986086421112357778899999999999999999999759904676577
Q ss_pred CCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCC
Q ss_conf 97585137999990999825995023344---3358864688645731113588878923469999999999990-9999
Q 002642 757 HNFLVNMRDPQRPVCKIGDLGLSKIKQKT---LISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLT-GEEP 832 (897)
Q Consensus 757 eNILLd~~d~~~g~VKLiDFGLAk~~~~~---~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLt-Gk~P 832 (897)
+|||++ .++.+||+|||+|+..... .......||+.|+|||++.+.. ++.++||||||+++|||+| |+.|
T Consensus 157 ~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~--~~~k~DVwS~Gvvl~Ellt~G~~P 230 (299)
T 4asz_A 157 RNCLVG----ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQP 230 (299)
T ss_dssp GGEEEC----GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred HHEEEC----CCCCEEECCCCCCEECCCCCCEEECCCEECCHHHCCHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 638987----99868988730010067887416647513470103889870799--970366778899999998089999
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99999599999999247899999988299999999930039999978999999999999972
Q 002642 833 YADLHSEEIIAGIIKGNLGPKIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAMAAAM 894 (897)
Q Consensus 833 F~~~~~~e~l~~ii~~~~~~~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l~~al 894 (897)
|......+.+..+..+. .+..|..+|.++.+||.+||+.||++|||++++.+.|+.+.++-
T Consensus 231 f~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 231 WYQLSNNEVIECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp TTTSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCC
T ss_conf 99989999999998089-88997414399999999976879668929999999998777639
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=1.00 E-value=1 Score=401.46 Aligned_cols=266 Identities=30% Similarity=0.500 Sum_probs=227.2
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEECC-------CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CC
Q ss_conf 3332348891599995226954999856559-------407999854786567872478999999999999961799-96
Q 002642 615 ELQTIKTSDLEYIKELGSGTFGTVFYGKWKG-------SDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHH-PN 686 (897)
Q Consensus 615 ~~~~i~~~~Yeiik~LG~G~fG~VYla~~kg-------~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~H-PN 686 (897)
..|++..++|++.+.||+|+||+||++++.+ +.||+|.++... .....+.+.+|+.+|.++.| ||
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-------~~~~~~~~~~E~~il~~l~hhpn 129 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLN 129 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTT
T ss_pred CCCEECHHHEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 55170579959820982178959999998688854477599999976235-------86899999999999997579984
Q ss_pred EEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 326832210489750799995422362678872026---------------66338899999999999999999899631
Q 002642 687 VVAFYGVVTDGPVTNLATVTEYMVNGSLKQVLRRKD---------------RTIDRRKRIIIAMDAAFGIEYLHEKNIVH 751 (897)
Q Consensus 687 IVkL~d~~~e~~~~~l~IVmEyl~GGSL~~~L~~~~---------------~~lse~~il~Ia~QIl~aL~yLHs~GIIH 751 (897)
||++++++.+.. ..+++||||+++|+|.++++... ..+++..+..|+.|++.||.|||+++|||
T Consensus 130 IV~l~g~~~~~~-~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiH 208 (353)
T 4ase_A 130 VVNLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 208 (353)
T ss_dssp BCCEEEEECCTT-SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEEEEEECC-CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEC
T ss_conf 877889999469-7799999838989799999743566654333410110356899999999999999987676278435
Q ss_pred CCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 2689997585137999990999825995023344---3358864688645731113588878923469999999999990
Q 002642 752 FDLKSHNFLVNMRDPQRPVCKIGDLGLSKIKQKT---LISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLT 828 (897)
Q Consensus 752 RDIKPeNILLd~~d~~~g~VKLiDFGLAk~~~~~---~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLt 828 (897)
|||||+|||++ .++.+||+|||+|+..... .......||+.|+|||++.+.. |+.++|||||||+||||++
T Consensus 209 RDLK~~NILl~----~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~--y~~ksDVwS~Gv~l~El~t 282 (353)
T 4ase_A 209 RDLAARNILLS----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 282 (353)
T ss_dssp SCCSGGGEEEC----GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEC----CCCCEEECCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCC--CCCCCCEEEHHHHHHHHHH
T ss_conf 74672113057----99978979654322245688720325401466656989994699--9975537406899999981
Q ss_pred -CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf -999999999599999999247899999988299999999930039999978999999999999972
Q 002642 829 -GEEPYADLHSEEIIAGIIKGNLGPKIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAMAAAM 894 (897)
Q Consensus 829 -Gk~PF~~~~~~e~l~~ii~~~~~~~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l~~al 894 (897)
|+.||......+.+...+.....+..|..+++++.++|.+||+.||.+|||+.+++++|+.++++.
T Consensus 283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf 8999999989899999999738988888657899999999976869667939999999999999875
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=401.07 Aligned_cols=248 Identities=24% Similarity=0.399 Sum_probs=215.3
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 889159999522695499985655--940799985478656787247899999999999996179996326832210489
Q 002642 621 TSDLEYIKELGSGTFGTVFYGKWK--GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNVVAFYGVVTDGP 698 (897)
Q Consensus 621 ~~~Yeiik~LG~G~fG~VYla~~k--g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNIVkL~d~~~e~~ 698 (897)
...|+++++||+|+||+||+++++ ++.||||++....... .+.+.+|+.+|+.++|||||++++++.+.
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~~- 143 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVG- 143 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--------GGGGHHHHHHHHHCCCTTBCCEEEEEEET-
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEEC-
T ss_conf 575387079602728299999998999899999985276568--------99999999999867998999199999989-
Q ss_pred CCEEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCEEEEEECCC
Q ss_conf 75079999542236267887202666338899999999999999999899631268999758513799999099982599
Q 002642 699 VTNLATVTEYMVNGSLKQVLRRKDRTIDRRKRIIIAMDAAFGIEYLHEKNIVHFDLKSHNFLVNMRDPQRPVCKIGDLGL 778 (897)
Q Consensus 699 ~~~l~IVmEyl~GGSL~~~L~~~~~~lse~~il~Ia~QIl~aL~yLHs~GIIHRDIKPeNILLd~~d~~~g~VKLiDFGL 778 (897)
..+||||||++||+|.+++.+ ..+++..+..|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 144 -~~~~ivmEy~~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~DFGl 216 (346)
T 4fih_A 144 -DELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 216 (346)
T ss_dssp -TEEEEEECCCTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----TTCCEEECCCTT
T ss_pred -CEEEEEEECCCCCCHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf -999999969899808999871--8989999999999999999999988835562788997887----999889902757
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC
Q ss_conf 502334-433588646886457311135888789234699999999999909999999995999999992478-999999
Q 002642 779 SKIKQK-TLISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLTGEEPYADLHSEEIIAGIIKGNL-GPKIPS 856 (897)
Q Consensus 779 Ak~~~~-~~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLtGk~PF~~~~~~e~l~~ii~~~~-~~~~p~ 856 (897)
|+.... .......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||......+.+..+..... ....+.
T Consensus 217 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~ 294 (346)
T 4fih_A 217 CAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 294 (346)
T ss_dssp CEECCSSSCCBCCCCSCGGGCCHHHHTTCC--BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGG
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 536678877534656275827999977999--996899999999999999787998985999999999717999887502
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 882999999999300399999789999999
Q 002642 857 WCEPTWRSLMERCWSSDPKSRPAFSEITKE 886 (897)
Q Consensus 857 ~is~eL~dLI~kcL~~DP~eRPSaeELL~~ 886 (897)
.+++++++||.+||.+||.+|||++|++++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 299999999999867995689099999609
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=1.00 E-value=1 Score=397.56 Aligned_cols=260 Identities=32% Similarity=0.560 Sum_probs=223.7
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEEC-------CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 333234889159999522695499985655-------9407999854786567872478999999999999961799963
Q 002642 615 ELQTIKTSDLEYIKELGSGTFGTVFYGKWK-------GSDVAIKRIKPSCFAEGSLEEDRLIADFWREAHMLGQIHHPNV 687 (897)
Q Consensus 615 ~~~~i~~~~Yeiik~LG~G~fG~VYla~~k-------g~~VAIK~ik~~~~~~~~~~~~~~~~~i~rEi~iLk~L~HPNI 687 (897)
..+++..++++++++||+|+||+||++++. ++.||||.++.... ....++|.+|+.++++++||||
T Consensus 19 ~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-------~~~~~~f~~E~~il~~l~HpNI 91 (308)
T 4gt4_A 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-------GPLREEFRHEAMLRARLQHPNV 91 (308)
T ss_dssp CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-------C-CHHHHHHHHHHHHHCCCTTB
T ss_pred CCCCCCHHHCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCC-------HHHHHHHHHHHHHHHHCCCCCC
T ss_conf 722287888858669135888489999985776588886999999880149-------6899999999999985899898
Q ss_pred EEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEC
Q ss_conf 2683221048975079999542236267887202---------------6663388999999999999999998996312
Q 002642 688 VAFYGVVTDGPVTNLATVTEYMVNGSLKQVLRRK---------------DRTIDRRKRIIIAMDAAFGIEYLHEKNIVHF 752 (897)
Q Consensus 688 VkL~d~~~e~~~~~l~IVmEyl~GGSL~~~L~~~---------------~~~lse~~il~Ia~QIl~aL~yLHs~GIIHR 752 (897)
|++++++.+. ..+++||||+++|+|.+++... ...+++..++.|+.|++.||.|||+++||||
T Consensus 92 V~l~g~~~~~--~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR 169 (308)
T 4gt4_A 92 VCLLGVVTKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 169 (308)
T ss_dssp CCEEEEECSS--SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCCCEEEEEC--CEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7736499889--98899998189994999998627654333322111124689999999999999999999986899778
Q ss_pred CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-
Q ss_conf 689997585137999990999825995023344---3358864688645731113588878923469999999999990-
Q 002642 753 DLKSHNFLVNMRDPQRPVCKIGDLGLSKIKQKT---LISGGVRGTIPWMAPELFKSKDNLVTEKVDVYSFGVVMWELLT- 828 (897)
Q Consensus 753 DIKPeNILLd~~d~~~g~VKLiDFGLAk~~~~~---~~~~~~~GT~~Y~APEvl~g~~~~~s~ksDIWSLGiLLyELLt- 828 (897)
||||+|||++ .++.+||+|||+++..... .......||+.|+|||++.+.. ++.++||||||++||||++
T Consensus 170 DLK~~NILl~----~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~--~s~ksDVwSfGvvl~El~t~ 243 (308)
T 4gt4_A 170 DLATRNVLVY----DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSY 243 (308)
T ss_dssp CCSGGGEEEC----GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEC----CCCCEEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHCCC--CCCCCHHHHHHHHHHHHHHC
T ss_conf 7362306887----99978988760202336777404734512577656989982799--99630001579999999968
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999959999999924789999998829999999993003999997899999999999
Q 002642 829 GEEPYADLHSEEIIAGIIKGNLGPKIPSWCEPTWRSLMERCWSSDPKSRPAFSEITKELRAM 890 (897)
Q Consensus 829 Gk~PF~~~~~~e~l~~ii~~~~~~~~p~~is~eL~dLI~kcL~~DP~eRPSaeELL~~Le~l 890 (897)
|..||......+....+..+. .++.|..+|..+.+|+.+||+.||.+||++.+++++|+.+
T Consensus 244 g~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 244 GLQPYCGYSNQDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCTTTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHC
T ss_conf 999999989999999998199-8999620369999999997587965792999999999853
Done!